ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII3545 good O KOG0803 Posttranslational modification, protein turnover, chaperones Predicted E3 ubiquitin ligase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII3545 1245226 1249779 1518
(1518 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR247c [O] KOG0803 Predicted E3 ubiquitin ligase 844 0.0
SPBC21D10.09c [O] KOG0803 Predicted E3 ubiquitin ligase 238 7e-62
Hs14780121 [O] KOG0803 Predicted E3 ubiquitin ligase 171 6e-42
At5g58410 [O] KOG0803 Predicted E3 ubiquitin ligase 140 1e-32
CE29120 [O] KOG0803 Predicted E3 ubiquitin ligase 114 2e-24
7293780 [O] KOG0803 Predicted E3 ubiquitin ligase 102 4e-21
7293778 [O] KOG0803 Predicted E3 ubiquitin ligase 71 2e-11
ECU05g1100 [O] KOG0803 Predicted E3 ubiquitin ligase 67 3e-10
>YMR247c [O] KOG0803 Predicted E3 ubiquitin ligase
Length = 1562
Score = 844 bits (2180), Expect = 0.0
Identities = 533/1579 (33%), Positives = 852/1579 (53%), Gaps = 78/1579 (4%)
Query: 1 MSFN-TNVFTDSSSTLGLGYNGVKVTLNYFDGLP---ILQNVQSTDLQLCFKSLLKRANT 56
MSF N F ++ LGLG+NGV+++LNYFDGLP +L ++ S +L+L FKSLLKR T
Sbjct: 1 MSFGGINTFQQYNTDLGLGHNGVRISLNYFDGLPDPSLLNSLYSNELKLIFKSLLKRDET 60
Query: 57 TKEKALNDLLSFIQDDDKLSIFQDDMFILSWCQIYAKLISSDSKTIRIQAHQFTATLIAK 116
TKEKAL DL + I D ++ F +D+F+L W QIYAKLI SD K IR+Q+HQ T L+
Sbjct: 61 TKEKALMDLSNLISDFNQNEYFFNDIFLLCWSQIYAKLIISDYKVIRLQSHQITIMLVKS 120
Query: 117 FGKRVSKFLKELIPMLLSGLFDVDTAVGRSCSDSLLNCF-KDSNKVNSLWKLFTSEILNF 175
K++SKFLK+ IP++L G ++D +V + + L CF KD K+N+LW +F ++LN
Sbjct: 121 LRKKISKFLKDFIPLILLGTCELDYSVSKPSLNELTECFNKDPAKINALWAVFQEQLLNL 180
Query: 176 IKQVIIVETAKSISDERYYTKEDISLRYNQLLIASIRTLTKL-ISVEELTTDQMETLHEI 234
+K++++ E +ISDERY +KE+ RY++++ +++ L KL + ++++ +L I
Sbjct: 181 VKEIVVNENEDTISDERYSSKEESEFRYHRVIASAVLLLIKLFVHNKDVSERNSSSLKVI 240
Query: 235 LTDEEFWNNLSLKDTKNLKGYQSLLHLMIELRSRQLYRXXXXXXXXXXXXXXXXXXQCNA 294
L+DE W L+LK+ +N Y+++L L+ L +R +
Sbjct: 241 LSDESIWKLLNLKNGQNTNAYETVLRLIDVLYTRGYMPSHKNIMKLAVKKLLKSLTHITS 300
Query: 295 KTLISVSSVLPDILKTLLEMNKYKDGKFWSYEKKSKERLLTFLSLGPGISDPVYYSLAYQ 354
K ++ V VLP IL L ++ Y+DG WSY+K SKE++L FLS+ P +++ +
Sbjct: 301 KNILKVCPVLPSILNLLATLDDYEDGTIWSYDKSSKEKVLKFLSVSRTSPSPGFFNAVFA 360
Query: 355 LSAES---SILEHQ-EWLSIWIKYLDHENDRRVLGRNGYKSLIEAWKNCIKFXXXXXXXX 410
L + + S L++ EWL W K + N++ RN + L E W N +KF
Sbjct: 361 LYSSTKRHSFLDYYLEWLPFWQKSVQRLNEKGFSARNSAEVLNEFWTNFLKFAEDSSEER 420
Query: 411 XXXXLHPNILRLITT-KDLKEIPELVLELSPT--------RINYAFLYDLIIDLLPLGKG 461
+ I ++ K L E +L LS I F D I + +
Sbjct: 421 VKKMVESEIFNSLSCGKSLSEYTKLNQTLSGVFPPDKWEREIEDYFTSDEDIRKIKVSF- 479
Query: 462 EKRKEVLLISNTCLILSSDITTMHMLSVEVMKSLEELENPDDLPSCYGFIF--YDXXXXX 519
EK LL+++ S I+ + V+++++ +P ++ + Y ++ +
Sbjct: 480 EKNLFALLVTSPNN--ESAISRLFDFFVQLIET-----DPSNVFNKYDGVYDALNYFLDS 532
Query: 520 XXXXXXXEINTFIDVLPTLVSEAFFKIPMDVMIDFSNSAFLA-NSTWEQYFDDFIMVLSQ 578
+I FI+ +PTLV E+ ++ +M +SNS F N+ +DF +V
Sbjct: 533 DMIFLNGKIGKFINEIPTLVQESTYQNFAGIMAQYSNSKFFKMNTDAITSLEDFFIVALS 592
Query: 579 YETPKKAIPSFLARLNSEFLSKLMHS-SQSYKDFTEDFVSTYQFDDDS-IFK--SKILNG 634
+ PK I + + L+++ +LM S S + + EDF+ Y+FDD IFK +K LN
Sbjct: 593 FNLPKTIILATMNELDNDIYQQLMKSDSLELELYIEDFMKNYKFDDSGEIFKGNNKFLNQ 652
Query: 635 SLLLRLYEASKKQGHVKAFKDYCTEIPETSEAYITLLSNSDFLSQSLIVDQKVTIPTT-- 692
+ LY ++ G V+ F +++ ET + TLL N+DFLS +L + T
Sbjct: 653 RTITTLYRSAVANGQVEQFCAVLSKLDETF--FSTLLLNTDFLSCALYEVSEDTNEKLFK 710
Query: 693 -----AHSDQTIANAVFKTVLDTISVECL--ITEDSIDEFVLQLQQESLLTRLFISLDLE 745
A + IAN + + +L V E + V + + +++F +
Sbjct: 711 LSLQLAKGNSEIANKLAQVILQHAQVYFSPGAKEKYVTHAVELINGCNDTSQIFFPANAI 770
Query: 746 VMFSRYINKIDTRTSVTSPLGLLPHIL-TAKGDASLVDYLKLIRLSQVVDKILTRFPDEV 804
+F+RY+ ID R+S+ S L H+L T +L + KLIR + +D +L P+ V
Sbjct: 771 EVFARYMPAIDYRSSLVSSLSTNTHLLLTDDKPINLKNMQKLIRYALFLDALLDALPERV 830
Query: 805 STSHLLFLTRCYELTADYNCLSDEQITYFHE--NNIFS-SCVNVSFEDLISSFTEDQSNE 861
+ + F+T EL DYNCLS+E +++ + F VN++F D++ + + +
Sbjct: 831 NNHIVAFITVVSELVTDYNCLSEEPNDLYYDFGHTFFKHGKVNLNFSDIVGNVIQPANGG 890
Query: 862 ILTVLFD-KNSSEVTSFYNCKIIYRICLNSVDYLSISQFDKIMDGFLRTARSLLSSKAL- 919
+ FD S+ V FY +++Y++ LNS+D +S + ++G L + S ++
Sbjct: 891 DAMLTFDIAESNSVYFFYYSRVLYKVLLNSIDTVSSTT----LNGLLASVESFVTKTVRD 946
Query: 920 --LVPRTLYMYAIFAASFKFNTVSANLCVFRNYLLSELVGVRWLSASETQKCFVSMLFLS 977
+ + AI F + + R L S+L+G+R + + + F S+ L+
Sbjct: 947 QKSTDKDYLLCAILLLMFNRSNSKDEITKLRTLLASQLIGIREVELVDQE--FKSLALLN 1004
Query: 978 QMLDFNVDTFNSSPLDDRRLNMALVSVTTLMQSEVWYDNSSNDVRLVIIQFLVKLHNLRE 1037
+LD P+ +RLNM S+ + S++ Y+ S + VRL+++ F KL
Sbjct: 1005 NLLDIPQADKQFVPIAPQRLNMIFRSILKWLDSDLAYEPSFSTVRLLLLDFFTKLMRFEG 1064
Query: 1038 VLDASERLLDCSVQLLQDCLGFLELREFQYYDELRYYVFVLINCIQNPTA--------FS 1089
V D + S +LL D L ++ + Y ELR L + + +
Sbjct: 1065 VRDMGITAFELSERLLADSLSMCQIDDTLYLLELRSSCLNLYETLSQGVSKNGEEISEYG 1124
Query: 1090 DEVDLATVIDVAFSNSDLE--TAVSTAYSKPLSVFLGALPYKEKSGIFDRLLNEYFNPQT 1147
DE+ +I++ F N + E VST + + L + ++ K+ + R+ N +
Sbjct: 1125 DEIQ-ENLIELMFLNFNQERNNQVSTLFYQKLYKVISSMELKKLESQYKRIFEVVLNDKD 1183
Query: 1148 ALVIMN---VLLPELKAIIKEHQQEMVIEYELL--KATITPASATEPSPSLGLDFEIPPT 1202
+N +L L +++ + QQ+++IEYEL K T + + + F++P
Sbjct: 1184 IGSNINQSRLLTTLLGSLVVKTQQDIIIEYELRIQKQTGSDVDGSASDNDVNSKFKLPQK 1243
Query: 1203 LLQSLDESMPHDYLEYQDKKTFMKYLNYCHLLVFYFQDISYDLRQRYIQQLKGKDLINRL 1262
LLQ + + +P +YLEY++K +F+KYL Y HL++ YF+D SY++RQ +I+QLK LINR+
Sbjct: 1244 LLQKVTDEVPKEYLEYENKNSFIKYLWYWHLILMYFKDTSYNMRQIFIEQLKEAGLINRM 1303
Query: 1263 LDFLADQMTLSYTKYWDNIDIQNVLSYPYSSNRG---KLDPVDECNMMMEFLMYHFFTIF 1319
DF+ DQ+ L T++W +D + + Y N K D +EC ++ +Y F
Sbjct: 1304 FDFITDQIDLRDTEFWKQVDTKEISEYNIVGNNFSPYKEDIFEECKKLLGHTLYQLFNNV 1363
Query: 1320 GSLVGHWWNAIKSRTFKDTVSTFVTRYISPTLITNELDETDKGLNKFNKDELNLTVKVNR 1379
G L WW IK RT ++ + FV+ +ISP LI NE D+ + +++ ++ LT+K+N
Sbjct: 1364 GCLTSIWWLNIKDRTLQNDIEKFVSEFISPILIKNEFDDINSKMDRLTSNDDALTIKLNN 1423
Query: 1380 NNNEIKASYLIDEQKLVVAFKLPSNFPLQNVQVHGVSRVGITEQQWKSWIISTQRIISNM 1439
NE+KASYLID+QKL ++FKLP N+PL N+QV+GVSRVGI+EQ+WK WI+STQ +I+ M
Sbjct: 1424 ITNEVKASYLIDDQKLEISFKLPKNYPLTNIQVNGVSRVGISEQKWKQWIMSTQHVITGM 1483
Query: 1440 NGSVVDSLELLSKNVKLQFSGFEECAICYYVLHAIDRKLPTKVCPTCNNRFHGACLYKWF 1499
NGSV+DSLEL +KNV LQFSGFEECAICY +LHA+DRKLP+K CPTC N+FHGACLYKWF
Sbjct: 1484 NGSVLDSLELFTKNVHLQFSGFEECAICYSILHAVDRKLPSKTCPTCKNKFHGACLYKWF 1543
Query: 1500 KSSGNNTCPLCRGEFNLRK 1518
+SSGNNTCPLCR E R+
Sbjct: 1544 RSSGNNTCPLCRSEIPFRR 1562
>SPBC21D10.09c [O] KOG0803 Predicted E3 ubiquitin ligase
Length = 1610
Score = 238 bits (606), Expect = 7e-62
Identities = 131/354 (37%), Positives = 201/354 (56%), Gaps = 22/354 (6%)
Query: 1166 HQQEMVIEYELLKATITPASATEPSP-SLGLDFEIPPTLLQSLDESMPHDYLEYQDKKTF 1224
H+ + + Y ++++ P + P SL +DF P ++ S E H
Sbjct: 1271 HELKELTVYYMVESDYEPDVSLCPELLSLAIDFPGDPFVMVSKMEKYEH---------AL 1321
Query: 1225 MKYLNYCHLLVFYFQDISYDLRQRYIQQLKGKDLINRLLDFLADQMTLSYTKYWDNIDIQ 1284
YL L+ ++F++ +Y+++ I QL DL+ LL+ L + + LSY + N+D
Sbjct: 1322 RVYLLVWDLIFYHFEETTYNIKLSIINQLHAMDLLRPLLNTLVEILNLSYDRPI-NVDKY 1380
Query: 1285 NVLSY---PYSSNRGKLDPVDECNMMMEFLMYHFFTIFGSLVGHWWNAIKSRTFKDTVST 1341
+ Y YSS D + + Y S V +W+ +K+R F TV +
Sbjct: 1381 PKIDYNLMDYSS------ATDRIRCLAIHIYYQCLRHLSSSVRSYWSEVKNRAFTSTVES 1434
Query: 1342 FVTRYISPTLITNELDETDKGLNKFNKDEL-NLTVKVNRNNNEIKASYLIDEQKLVVAFK 1400
F +SP LI+ LD+ ++ + + + ++ VKVNRN EI Y +DE KL +A K
Sbjct: 1435 FTGYNVSPLLISASLDDVERSIESEDFQSVGDVNVKVNRNTREISFIYNVDEHKLEMAIK 1494
Query: 1401 LPSNFPLQNVQVHGVSRVGITEQQWKSWIISTQRIISNMNGSVVDSLELLSKNVKLQFSG 1460
+PS +PLQNVQV G+ RVG+ E+QW+SWI+++Q I+S+ NGS+ D+L +L KN+ + F G
Sbjct: 1495 IPSVYPLQNVQVEGIERVGVNERQWRSWILASQSILSSQNGSITDALLVLKKNISMHFEG 1554
Query: 1461 FEECAICYYVLHAIDRKLPTKVCPTCNNRFHGACLYKWFKSSGNNTCPLCRGEF 1514
EECAICY VL +++R LP K C TC ++FH +CLYKWFKSS ++ CPLCR F
Sbjct: 1555 VEECAICYSVL-SVERTLPNKRCGTCRHKFHASCLYKWFKSSNSSRCPLCRSSF 1607
Score = 72.4 bits (176), Expect = 5e-12
Identities = 55/213 (25%), Positives = 101/213 (46%), Gaps = 20/213 (9%)
Query: 48 KSLLKRANTTKEKALNDLLSFIQDDDKLSIFQDDMFILSWCQIYAKLISSDSKTIRIQAH 107
K+L KR TK +AL DL+ + + S F ++ F+ + ++ +L + +R++
Sbjct: 58 KNLQKRDIVTKCRALQDLIQW----NDPSQFDNEQFLNALAVLFPRLSIEVERHVRLKIF 113
Query: 108 QFTATLIAKFGKRVSKFLKELIPMLLSGLFDVDTAVGRSCSDSLLNCFKDSNKVNSLWKL 167
F + L + K+++ +LK I + G FD D AV S DS N + K +W
Sbjct: 114 VFMSVLSSALQKKLAPWLKFYITPWVMGFFDSDRAVSVSAKDSFKNLLSEE-KWPHVWLK 172
Query: 168 FTSEILNFIKQVIIVETAKSISDERYYTKEDISLRYNQLLIASIRTLTKLI----SVEEL 223
F S I + V + E +S++D R+++ E+ + ++ + + TL+ L +E L
Sbjct: 173 FGSTIAPIVTDVFLHEDKESLTDLRFFSNEEAESKVTRVKSSCLLTLSFLFKQTADLENL 232
Query: 224 TTDQ-----------METLHEILTDEEFWNNLS 245
TD+ E L + +EFW+ +S
Sbjct: 233 ETDKKIDKQTFKSSLYENLSTLFKSDEFWSLVS 265
>Hs14780121 [O] KOG0803 Predicted E3 ubiquitin ligase
Length = 1071
Score = 171 bits (434), Expect = 6e-42
Identities = 95/295 (32%), Positives = 151/295 (50%), Gaps = 13/295 (4%)
Query: 1227 YLNYCHLLVFYFQDISYDLRQRYIQQLKGKDLINRLLDFLADQMTLSYTKYWDNIDIQNV 1286
YL L++ +F+ S LR Y L+ +N+LL L M + T +++ N
Sbjct: 782 YLLTWKLILTFFKAASSQLRALYSMYLRKTKSLNKLLYHLFRLMPENPTYAETAVEVPNK 841
Query: 1287 LSYPYSSNRGKLDPVDECNMMMEFL------MYHF-FTIFGSLVGHWWNAIKSRTFKDTV 1339
+ + +L + E M+ + +YH ++V WWN+ + R F + V
Sbjct: 842 DPKTFFTEELQLS-IRETTMLPYHIPHLACSVYHMTLKDLPAMVRLWWNSSEKRVF-NIV 899
Query: 1340 STFVTRYISPTLITNELDETDKGLNKFNKDELNLTVKVNRNNNEIKASYLIDEQKLVVAF 1399
F ++Y+S L E+ FN +TVK E+ A+Y I++ + +
Sbjct: 900 DRFTSKYVSSVLSFQEISSVQTSTQLFN----GMTVKARATTREVMATYTIEDIVIELII 955
Query: 1400 KLPSNFPLQNVQVHGVSRVGITEQQWKSWIISTQRIISNMNGSVVDSLELLSKNVKLQFS 1459
+LPSN+PL ++ V RVG+ QQW++W++ +++ NGS+++ L L NV +F
Sbjct: 956 QLPSNYPLGSIIVESGKRVGVAVQQWRNWMLQLSTYLTHQNGSIMEGLALWKNNVDKRFE 1015
Query: 1460 GFEECAICYYVLHAIDRKLPTKVCPTCNNRFHGACLYKWFKSSGNNTCPLCRGEF 1514
G E+C IC+ V+H + LP K C TC +FH ACLYKWF SS +TCPLCR F
Sbjct: 1016 GVEDCMICFSVIHGFNYSLPKKACRTCKKKFHSACLYKWFTSSNKSTCPLCRETF 1070
>At5g58410 [O] KOG0803 Predicted E3 ubiquitin ligase
Length = 1873
Score = 140 bits (354), Expect = 1e-32
Identities = 63/194 (32%), Positives = 112/194 (57%), Gaps = 4/194 (2%)
Query: 1318 IFGSLVGHWWNAIKSRTFKDTVSTFVTRYISPTLITNELDETDKGLNKFNKDELNLTVKV 1377
+ + V W++ ++ R+ + F + SP+LI NEL + K FN + + +V +
Sbjct: 1681 VLPAYVREWFSEMRDRSASSLIEAFTRTWCSPSLIKNELSQIKKA--DFNDE--SFSVSI 1736
Query: 1378 NRNNNEIKASYLIDEQKLVVAFKLPSNFPLQNVQVHGVSRVGITEQQWKSWIISTQRIIS 1437
++ NE+ A+Y DE + + +LP ++PL+ V V+ +GI+E + + W++S Q +
Sbjct: 1737 SKAANEVVATYTKDETGMDLVIRLPVSYPLKPVDVNCAKSIGISEAKQRKWLMSMQMFVR 1796
Query: 1438 NMNGSVVDSLELLSKNVKLQFSGFEECAICYYVLHAIDRKLPTKVCPTCNNRFHGACLYK 1497
+ NG++ +++ + +N +F G E+C ICY V+H + LP + C TC +FH ACL K
Sbjct: 1797 HQNGALAEAIRIWKRNSDKEFEGVEDCPICYSVIHIGNHSLPRRACVTCKYKFHKACLDK 1856
Query: 1498 WFKSSGNNTCPLCR 1511
WF +S CPLC+
Sbjct: 1857 WFYTSNKKLCPLCQ 1870
>CE29120 [O] KOG0803 Predicted E3 ubiquitin ligase
Length = 1566
Score = 114 bits (284), Expect = 2e-24
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 6/172 (3%)
Query: 1343 VTRYISPTLITNELDETDKGLNKFNKDELNLTVKVNRNNNEIKASYLIDEQKLVVAFKLP 1402
VT+Y S LI EL + + KF + TV V EI A Y+++E K+ + LP
Sbjct: 1400 VTKYASRLLIEQELGKVREA--KFEGEMKVRTVPVT---GEIIAEYVVEETKMKLTIGLP 1454
Query: 1403 SNFPLQNVQVHGVSRVGITEQQWKSWIISTQRIISNMNGSVVDSLELLSKNVKLQFSGFE 1462
++PL +V + + + + K W++ + + NG++++ +E+ +NV G E
Sbjct: 1455 PDYPL-SVPSLTLDKAIVKTDRAKKWLLQLNAYLFHQNGAILEGIEMWKRNVDKGVEGVE 1513
Query: 1463 ECAICYYVLHAIDRKLPTKVCPTCNNRFHGACLYKWFKSSGNNTCPLCRGEF 1514
+C IC +H +LP C C N+FH CLYKWF+SS +TCPLCR F
Sbjct: 1514 DCTICMMTVHQQTHQLPKIKCKQCKNKFHSNCLYKWFESSNQSTCPLCRNNF 1565
Score = 55.5 bits (132), Expect = 7e-07
Identities = 44/177 (24%), Positives = 80/177 (44%), Gaps = 6/177 (3%)
Query: 42 DLQLCFKSLLKRANTTKEKALNDLLSFIQDDDKLSIFQDDMFILSWCQIYAKLISSDSKT 101
+ ++ K L K+ T+EK L +L+ I ++ + F C + A+L + S T
Sbjct: 45 ETRIVMKKLTKKDCQTREKGLKELMELINTENSSIESSYEHF----CGLVAQLTTDGSPT 100
Query: 102 IRIQAHQFTATLIAKFGKRVSKFLKELIPMLLSGLFDVDTAVGRSCSDSLLNCFKDSNKV 161
+R+ + + + K K SK LK++IP +L DV V + S + + F D++K
Sbjct: 101 VRMLTMKVISQFLTKLKKSASKGLKKIIPFVLFAKSDVTNGVAAAASAVIRDGF-DADKK 159
Query: 162 NSLWKLFTSEILNFIKQVIIVETAKSISDERYYTKEDISLRYNQLLIASIRTLTKLI 218
+ +LF + ++ + S+ E Y ED+ R +L S+ T I
Sbjct: 160 RQVVELFVPNTFDLAAKIAEGKHELSLPAE-YDASEDLETRKMRLETQSLNTFLSYI 215
>7293780 [O] KOG0803 Predicted E3 ubiquitin ligase
Length = 484
Score = 102 bits (255), Expect = 4e-21
Identities = 60/206 (29%), Positives = 105/206 (50%), Gaps = 10/206 (4%)
Query: 1294 NRGKLDPVDECNMMMEFLMYHFFTI----FGSLVGHWWNAIKSRTFKDTVSTFVTRYISP 1349
N+ +++ ++ ++ +E H +T ++V WWNA +SR K+ + T Y+S
Sbjct: 13 NKKRINTQNDRHLPLERYACHLYTEVLRKLPAVVRRWWNATQSRQ-KNFIDNLTTNYVSS 71
Query: 1350 TLITNELDETDKGLNKFNKDELNLTVKVNRNNNEIKASYLIDEQKLVVAFKLPSNFPLQN 1409
+ + EL N+ K E N+ V V+ + E+ A Y IDE ++ + L N+PL
Sbjct: 72 LICSEELKAI---ANRKEKHE-NMQVTVHSSTREVLAVYAIDEARMELVITLAPNYPLGA 127
Query: 1410 VQVHGVSRVGITEQQWKSWIISTQRIISNMNGSVVDSLELLSKNVKLQFSGFEECAICYY 1469
V+V ++G ++ + +++ NG++ D L + N+ +F G EEC +CY
Sbjct: 128 VKVECGKQIGGRASS-RNVGMQLTIFLTHQNGTIYDGLTMWKNNLDKKFEGVEECYVCYT 186
Query: 1470 VLHAIDRKLPTKVCPTCNNRFHGACL 1495
V+H +LP C TC +FHG CL
Sbjct: 187 VIHQETCQLPKLTCKTCKKKFHGPCL 212
>7293778 [O] KOG0803 Predicted E3 ubiquitin ligase
Length = 1341
Score = 70.9 bits (172), Expect = 2e-11
Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 9/208 (4%)
Query: 40 STDLQLCFKSLLKRANTTKEKALNDLLSFIQDDDKLSIFQDDMFILSWCQIYAKLISSDS 99
S Q+ + L K+ TK+KAL +L I+ D + + ++ + + W + Y L S
Sbjct: 68 SPQTQIILRKLSKKDPMTKKKALQELHELIEQSD-VEVLKNILPL--WPKYYLNLASDPE 124
Query: 100 KTIRIQAHQFTATLIAKFGKRVSKFLKELIPMLLSGLFDVDTAVGRSCSDSLLNCFK-DS 158
T+R Q L+AK K ++ +LK L+P+ L FD S S + F ++
Sbjct: 125 HTVREQTQTVLQLLMAKCKKAMAPYLKLLVPVWLGSRFDTYAPAASIASQSFRDTFAGNA 184
Query: 159 NKVNSLWKLFTSEILNFIKQVIIVETAKSISDERYYTKEDISLRYNQLLIASIRTLTKLI 218
N+ + EIL + + + TA ++S + T ED +Y +++I+S++ L+ +
Sbjct: 185 NRSREVCMHCQVEILEYATRNLTFHTAATLSIGKSLTPEDAEQKYQRVIISSLKLLSFFM 244
Query: 219 SVEELTTDQMETLHE----ILTDEEFWN 242
+ T+++ + E ++ ++FW+
Sbjct: 245 G-QTAQTEELSQVKEGFGTLVAHQKFWS 271
>ECU05g1100 [O] KOG0803 Predicted E3 ubiquitin ligase
Length = 1063
Score = 66.6 bits (161), Expect = 3e-10
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 1363 LNKFNKDELNLTVKVNRNNN--EIKASYLIDEQKLVVAFKLPSNFPLQN-VQVHGVSRVG 1419
L + ++ ++TVK + N +I +Y +PS +P + + + R
Sbjct: 909 LKEASRTIADVTVKARKLTNGFDIGITYTAGGTLFTALIAIPSGYPYKKPIFTSEIGRKS 968
Query: 1420 ITEQQWKSWIISTQRIISNMNGSVVDSLELLSKNVKLQFSGFEECAICYYVLHAIDRKLP 1479
+ + I + + + + L N+ + SG EC ICY+V+ D P
Sbjct: 969 LLNLRINEMIKKCSKFM--------ELVGLWKINIDEKISGHRECPICYFVIDMHDSSFP 1020
Query: 1480 TKVCPTCNNRFHGACLYKWFKSSGNNTCPLCR 1511
+ C TC N+FH C+ KW + + CP+CR
Sbjct: 1021 SSRCATCKNKFHTRCIVKWAATGARSNCPVCR 1052
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.137 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,378,823
Number of Sequences: 60738
Number of extensions: 3532398
Number of successful extensions: 10451
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10413
Number of HSP's gapped (non-prelim): 16
length of query: 1518
length of database: 30,389,216
effective HSP length: 119
effective length of query: 1399
effective length of database: 23,161,394
effective search space: 32402790206
effective search space used: 32402790206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)