ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII3552 good G KOG1950 Carbohydrate transport and metabolism Glycosyl transferase, family 8 - glycogenin
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII3552 1250171  1251529 453  
         (453 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YOR320c [G] KOG1950 Glycosyl transferase family 8 - glycogenin        387   e-107
At5g18480_1 [G] KOG1950 Glycosyl transferase family 8 - glycogenin     59   2e-08
At1g54940 [G] KOG1950 Glycosyl transferase family 8 - glycogenin       52   2e-06

>YOR320c [G] KOG1950 Glycosyl transferase family 8 - glycogenin
          Length = 491

 Score =  387 bits (994), Expect = e-107
 Identities = 202/486 (41%), Positives = 300/486 (61%), Gaps = 36/486 (7%)

Query: 3   KRKVRYLLLIVVVFTGIILSVEAIMRFQLNKNVDYYLKFFDKHKDNIENMYDPLNIKQIP 62
           KR++R+++ I+     + +    ++ FQ N+ + +Y K+F + KD +  +Y+PL IKQIP
Sbjct: 6   KRRIRFIVFILFGVLTVFVVSRLVVHFQYNQEIKFYKKYFQQRKDGLHEIYNPLEIKQIP 65

Query: 63  YSTIDQLYTKRQSE----AEPIDWDKFAYVNYITDFEYLCNTLIQFRKLNDS-GSKAKLL 117
             TID LYT R  +     E I+W KFAYVNY+T+ +YLCNTLI F  L     +KAKL+
Sbjct: 66  KETIDDLYTARLDKELKNGEVIEWSKFAYVNYVTNADYLCNTLIIFNDLKQEFETKAKLV 125

Query: 118 ALVTDTLV--NKSKENKEVEALLNKIKSVS-DRVAVTEVGSVIQPNDHTPWSKSLTKLAI 174
            L++  L+  N S     + +LLNKI+++  D+V +  + ++++P D TPW++SLTKL +
Sbjct: 126 LLISKDLLDPNTSSNVAYISSLLNKIQAIDEDQVVIKLIDNIVKPKDTTPWNESLTKLLV 185

Query: 175 FNLTDYERIIYMDNDAIIHDKMDELFFLPSYVKFAAPISYWFVTADDLRTVSTDTKKLFK 234
           FN T+++R+IY+DNDAI+   +DELFFLP+Y+KFAAP++YWF++  DL     +T+   K
Sbjct: 186 FNQTEFDRVIYLDNDAILRSSLDELFFLPNYIKFAAPLTYWFLSNSDLEKSYHETRHREK 245

Query: 235 TN-KLDPIEKKLASRVKNSLEIYNHLPNLPQHFYSKSMNFIIDIDG----------FQKS 283
               L    K L  R+     IYNHLP+LP   Y  S N   DI            FQ S
Sbjct: 246 QPINLQSYTKVLTKRIGKGQMIYNHLPSLPHSLYLNSNNIAQDIISSTSSLSPLFDFQSS 305

Query: 284 DN--KVNFATHLMVIKPDVTMANDIRDNILPRYLKAKEEYDTDLINEELYNFKELIYYQF 341
               K+ FA++LMVI P     ++I + +LP+ L  KE+YD DLINEE+YN K++IY QF
Sbjct: 306 KKVGKLKFASNLMVINPSKEAFDEIVNVMLPKILNKKEKYDMDLINEEMYNLKKIIYKQF 365

Query: 342 KIFRKIQYLFKPSVLILPYTKYGLLTKSIDDKRQKDLLKNAILGYERKEKD--------- 392
             FRK++ LFKP VL+LP+ +YGLLT S+ + R   ++ N +LGY+  + D         
Sbjct: 366 IFFRKVRKLFKPEVLVLPFARYGLLTGSLRNPRHYSIIYNDVLGYKTLDNDGNDIPVGLN 425

Query: 393 DLIQDAKFIHFSDYPLSKPWFYSNADDIQCSKKYSISDEN------CQLWKSLYKEYLES 446
           D +  +K+IHFSDYPL+KPW Y +  + +C  K   ++++      C LW S+Y  Y++S
Sbjct: 426 DSVAYSKYIHFSDYPLAKPWNYPSMKEFECIVKEEDAEDSKLEHQACDLWNSVYASYIQS 485

Query: 447 RAICQV 452
           R IC V
Sbjct: 486 REICLV 491


>At5g18480_1 [G] KOG1950 Glycosyl transferase family 8 - glycogenin
          Length = 569

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 38/120 (31%), Positives = 64/120 (52%), Gaps = 15/120 (12%)

Query: 84  KFAYVNYITDFEYLCNTLIQFRKLNDSGSKAKLLALVTDTLVNKSKENKEVEALLNKIKS 143
           K AYV  +   E+L    +  + + D+GS   ++ALV+D + + SK+      LL     
Sbjct: 30  KVAYVTLLYGDEFLLGVRVLGKSIRDTGSTKDMVALVSDGVSDYSKK------LLK---- 79

Query: 144 VSDRVAVTEVGSVIQPNDHTP---WSKSLTKLAIFNLTDYERIIYMDNDAIIHDKMDELF 200
            +D   V ++  +  PN   P   W    TKL IFN+TDY++++Y+D D I+   +++LF
Sbjct: 80  -ADGWKVEKISLLANPNQVHPTRFWGV-YTKLKIFNMTDYKKVVYLDADTIVVKNIEDLF 137


>At1g54940 [G] KOG1950 Glycosyl transferase family 8 - glycogenin
          Length = 557

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 18/125 (14%)

Query: 84  KFAYVNYITDFE-YLCNTLIQFRKLNDSGSKAKLLALVTDTLVNKSKENKEVEA----LL 138
           + AYV  +   E Y+C  +   + +  SGS   ++ L   T+ NKS            L+
Sbjct: 270 RVAYVTVLHSSEAYVCGAIALAQSIRQSGSHKDMILLHDHTITNKSLIGLSAAGWNLRLI 329

Query: 139 NKIKSVSDRVAVTEVGSVIQPNDHTPWSKSLTKLAIFNLTDYERIIYMDNDAIIHDKMDE 198
           ++I+S              Q + +  W+ S  KL ++ +TDY++++++D D II  K+D 
Sbjct: 330 DRIRSPFS-----------QKDSYNEWNYS--KLRVWQVTDYDKLVFIDADFIILKKLDH 376

Query: 199 LFFLP 203
           LF+ P
Sbjct: 377 LFYYP 381


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.320    0.138    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,976,868
Number of Sequences: 60738
Number of extensions: 1196278
Number of successful extensions: 3404
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3394
Number of HSP's gapped (non-prelim): 4
length of query: 453
length of database: 30,389,216
effective HSP length: 110
effective length of query: 343
effective length of database: 23,708,036
effective search space: 8131856348
effective search space used: 8131856348
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)