ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIII3610  suspect: LH   K     KOG2857  Transcription                                                  Predicted MYND Zn-finger protein/hormone receptor interactor

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII3610 1273731  1274225 165  
         (165 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC4F10.19c [K] KOG2857 Predicted MYND Zn-finger protein/hormon...    50   1e-06
YHR040w [R] KOG2858 Uncharacterized conserved protein                  47   9e-06

>SPAC4F10.19c [K] KOG2857 Predicted MYND Zn-finger protein/hormone receptor
           interactor
          Length = 154

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 32/116 (27%), Positives = 54/116 (45%), Gaps = 19/116 (16%)

Query: 1   MVKCEVCGDKEALYRCPKSSVRYCSLVCYKNIKKSESDNVESNKTDPESNSTTVKEADDT 60
           M  C +C + E  Y+CPK S  YCSL C+K I +S+ + V  N      N+TT K   + 
Sbjct: 1   MTTCSICNESEIKYKCPKCSFPYCSLPCWK-IHQSQCETVNDN------NTTTFKGVKEP 53

Query: 61  VSVPGSQTDSV-----------ESVPTPLNKYQYALTDSRIRELLRHNTVKFHLDK 105
           ++ P    + +           E++P+  +  +  + D  I+ L+  N    H+ K
Sbjct: 54  LNPPEPSPNVIYVNGRIPSLAEEALPSE-SLLESIVEDPSIKNLIESNAELLHIMK 108


>YHR040w [R] KOG2858 Uncharacterized conserved protein
          Length = 366

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 26/60 (43%), Positives = 33/60 (54%), Gaps = 4/60 (6%)

Query: 2  VKCEVCGDKEALYRCPKSSVRYCSLVCYKNIKKSESDNVESNKTDPES--NSTTVKEADD 59
          V C VCG KE  Y+CP+  V+ CSL C K  K    DN      DP+   +S  +K+ADD
Sbjct: 3  VLCGVCGIKEFKYKCPRCLVQTCSLECSK--KHKTRDNCSGQTHDPKEYISSEALKQADD 60


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.314    0.130    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,962,250
Number of Sequences: 60738
Number of extensions: 391620
Number of successful extensions: 1535
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1535
Number of HSP's gapped (non-prelim): 2
length of query: 165
length of database: 30,389,216
effective HSP length: 98
effective length of query: 67
effective length of database: 24,436,892
effective search space: 1637271764
effective search space used: 1637271764
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)