ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII3758 good H KOG3110 Coenzyme transport and metabolism Riboflavin kinase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII3758 1325471 1324917 -185
(185 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR236c [H] KOG3110 Riboflavin kinase 214 5e-56
SPCC18.16c [H] KOG3110 Riboflavin kinase 124 1e-28
7298960 [H] KOG3110 Riboflavin kinase 118 4e-27
At4g21470_2 [H] KOG3110 Riboflavin kinase 117 7e-27
Hs19923525 [H] KOG3110 Riboflavin kinase 115 3e-26
CE06297 [H] KOG3110 Riboflavin kinase 84 8e-17
>YDR236c [H] KOG3110 Riboflavin kinase
Length = 218
Score = 214 bits (545), Expect = 5e-56
Identities = 105/185 (56%), Positives = 133/185 (71%), Gaps = 2/185 (1%)
Query: 3 RHCDVSIPDSPEPPFPITTSFVDVIAGFGRGSAELGIPTANVPIDDLPKIVEQLDTGVYF 62
R D+ IP P PPFP+ T + D++ GFGRGSAELGIPTANVPI+ LPK + LD GVYF
Sbjct: 34 REVDLPIPAQPGPPFPLVTDYCDIVCGFGRGSAELGIPTANVPINQLPKGINDLDLGVYF 93
Query: 63 GWCKVRMAKDRDTKVEQRPDGREVQYNNGTLLND--EDLAVLPVVLSVGWNPFYQNKNKT 120
G+ ++ ++ VE R DGR V YN G L++ +DL+VLP+VLSVG NPFY N KT
Sbjct: 94 GFAHIKTVDGQELSVETRRDGRTVVYNYGQYLSEANDDLSVLPMVLSVGKNPFYGNDFKT 153
Query: 121 VELHIIHKFSDNFYGAQIKFNFLGYIRPELDYTTKDALIADIHTDIEIAKEKLQLPGYRK 180
+ELHIIH F ++FYGA++KFN LG+IRPEL+YTTK+ALI DI+ DI A+ L P Y+
Sbjct: 154 MELHIIHDFKNDFYGARVKFNILGHIRPELNYTTKEALIEDINIDIRTAQTVLATPPYQV 213
Query: 181 LKDTL 185
K L
Sbjct: 214 FKQQL 218
>SPCC18.16c [H] KOG3110 Riboflavin kinase
Length = 163
Score = 124 bits (310), Expect = 1e-28
Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 31/173 (17%)
Query: 10 PDSPEPPFPITTSFVDVIAGFGRGSAELGIPTANVPIDDLPKIVEQLDTGVYFGWCKVRM 69
P+ + P+PI V+ GFGRGS ELGIPTAN+ D + +++ D+GVYFG+ V+
Sbjct: 15 PEKVQSPYPIRFEG-KVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQK 73
Query: 70 AKDRDTKVEQRPDGREVQYNNGTLLNDEDLAVLPVVLSVGWNPFYQNKNKTVELHIIHKF 129
V P+V+SVGWNP+Y+NK ++ E+H+I +
Sbjct: 74 R------------------------------VFPMVMSVGWNPYYKNKLRSAEVHLIERQ 103
Query: 130 SDNFYGAQIKFNFLGYIRPELDYTTKDALIADIHTDIEIAKEKLQLPGYRKLK 182
++FY ++ LGYIRPEL+Y D LI DIHTDI +A + P Y K
Sbjct: 104 GEDFYEEIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYK 156
>7298960 [H] KOG3110 Riboflavin kinase
Length = 153
Score = 118 bits (296), Expect = 4e-27
Identities = 64/159 (40%), Positives = 88/159 (55%), Gaps = 29/159 (18%)
Query: 25 DVIAGFGRGSAELGIPTANVPIDDLPKIVEQLDTGVYFGWCKVRMAKDRDTKVEQRPDGR 84
+++ GFGRGS ELGIPTAN P++ + + E L TG Y+GW V
Sbjct: 12 EIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANV----------------- 54
Query: 85 EVQYNNGTLLNDEDLAVLPVVLSVGWNPFYQNKNKTVELHIIHKFSDNFYGAQIKFNFLG 144
+NG V +VLS+GWNPFY NK K+VE H++H F+ + YG +K +G
Sbjct: 55 ----DNGP--------VHKMVLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVG 102
Query: 145 YIRPELDYTTKDALIADIHTDIEIAKEKLQLPGYRKLKD 183
Y+RPE + + ++LIA I DIE AK L KLK+
Sbjct: 103 YLRPERSFDSLESLIAAIRGDIEQAKAFLDEADKAKLKE 141
>At4g21470_2 [H] KOG3110 Riboflavin kinase
Length = 142
Score = 117 bits (294), Expect = 7e-27
Identities = 59/157 (37%), Positives = 88/157 (55%), Gaps = 29/157 (18%)
Query: 26 VIAGFGRGSAELGIPTANVPIDDLPKIVEQLDTGVYFGWCKVRMAKDRDTKVEQRPDGRE 85
VI GFGRGS LGIPTAN+ D + + +GVYFGW +
Sbjct: 8 VIKGFGRGSKVLGIPTANLSTKDYADELVEHPSGVYFGWAGLAKR--------------- 52
Query: 86 VQYNNGTLLNDEDLAVLPVVLSVGWNPFYQNKNKTVELHIIHKFSDNFYGAQIKFNFLGY 145
V +V+S+GWNP++ NK KT+E ++H F+++FYG +++ +GY
Sbjct: 53 --------------GVFKMVMSIGWNPYFNNKEKTIEPWLLHDFTEDFYGEELRLIIVGY 98
Query: 146 IRPELDYTTKDALIADIHTDIEIAKEKLQLPGYRKLK 182
IRPE ++++ ++LIA IH D E+A++ L LP Y K K
Sbjct: 99 IRPEANFSSLESLIAKIHEDREVAEKALDLPSYAKFK 135
>Hs19923525 [H] KOG3110 Riboflavin kinase
Length = 162
Score = 115 bits (289), Expect = 3e-26
Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 29/158 (18%)
Query: 26 VIAGFGRGSAELGIPTANVPIDDLPKIVEQLDTGVYFGWCKVRMAKDRDTKVEQRPDGRE 85
V+ GFGRGS +LGIPTAN P + + + TG+Y+GW V
Sbjct: 19 VVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGD-------------- 64
Query: 86 VQYNNGTLLNDEDLAVLPVVLSVGWNPFYQNKNKTVELHIIHKFSDNFYGAQIKFNFLGY 145
V +V+S+GWNP+Y+N K++E HI+H F ++FYG + +GY
Sbjct: 65 ---------------VHKMVVSIGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGY 109
Query: 146 IRPELDYTTKDALIADIHTDIEIAKEKLQLPGYRKLKD 183
+RPE ++ + ++LI+ I DIE AK++L+LP + K+K+
Sbjct: 110 LRPEKNFDSLESLISAIQGDIEEAKKRLELPEHLKIKE 147
>CE06297 [H] KOG3110 Riboflavin kinase
Length = 135
Score = 84.3 bits (207), Expect = 8e-17
Identities = 50/146 (34%), Positives = 73/146 (49%), Gaps = 30/146 (20%)
Query: 25 DVIAGFGRGSAELGIPTANVPIDDLPKIVEQLDTGVYFGWCKVRMAKDRDTKVEQRPDGR 84
+V+ GFGRG ELG PTAN+ + + E L GVYFG K+ DG+
Sbjct: 11 EVVRGFGRGGKELGCPTANMDGTVVNGLPEGLPVGVYFGTAKL--------------DGK 56
Query: 85 EVQYNNGTLLNDEDLAVLPVVLSVGWNPFYQNKNKTVELHIIHKFSDNFYGAQIKFNFLG 144
+ + +S+GWNP YQN+ KTVELH+I +FYG + +G
Sbjct: 57 SYK----------------MAMSIGWNPQYQNEKKTVELHLIDYSGSDFYGKTLSAVIIG 100
Query: 145 YIRPELDYTTKDALIADIHTDIEIAK 170
+IR + + D L + I DI++A+
Sbjct: 101 FIREMKSFESLDELKSAIAMDIKVAR 126
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.141 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,414,487
Number of Sequences: 60738
Number of extensions: 558273
Number of successful extensions: 1218
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1206
Number of HSP's gapped (non-prelim): 10
length of query: 185
length of database: 30,389,216
effective HSP length: 100
effective length of query: 85
effective length of database: 24,315,416
effective search space: 2066810360
effective search space used: 2066810360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)