ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII3895 good D KOG3484 Cell cycle control, cell division, chromosome partitioning Cyclin-dependent protein kinase CDC28, regulatory subunit CKS1, and related proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII3895 1375550 1375155 -132
(132 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR135w [D] KOG3484 Cyclin-dependent protein kinase CDC28 regula... 214 3e-56
SPBC1734.14c [D] KOG3484 Cyclin-dependent protein kinase CDC28 r... 153 7e-38
At2g27970 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regu... 99 2e-21
At2g27960 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regu... 97 6e-21
Hs4502859 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regu... 91 4e-19
CE22913 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regula... 91 4e-19
Hs4502857 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regu... 91 5e-19
7297507 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regula... 88 3e-18
7299072 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regula... 85 2e-17
CE03980 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regula... 82 2e-16
Hs18573692 [D] KOG3484 Cyclin-dependent protein kinase CDC28 reg... 61 5e-10
>YBR135w [D] KOG3484 Cyclin-dependent protein kinase CDC28 regulatory
subunit CKS1 and related proteins
Length = 150
Score = 214 bits (544), Expect = 3e-56
Identities = 98/106 (92%), Positives = 102/106 (95%)
Query: 5 HAFQGRKLSDQERTRVLEFQDSIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGT 64
HAFQGRKL+DQER RVLEFQDSIHYSPRYSDD +EYRHVMLPKAMLKVIPSDYFN + GT
Sbjct: 6 HAFQGRKLTDQERARVLEFQDSIHYSPRYSDDNYEYRHVMLPKAMLKVIPSDYFNSEVGT 65
Query: 65 LRILTEDEWRGLGITQSLGWEHYECHAPEPHILLFKRPLNYEAEIR 110
LRILTEDEWRGLGITQSLGWEHYECHAPEPHILLFKRPLNYEAE+R
Sbjct: 66 LRILTEDEWRGLGITQSLGWEHYECHAPEPHILLFKRPLNYEAELR 111
>SPBC1734.14c [D] KOG3484 Cyclin-dependent protein kinase CDC28 regulatory
subunit CKS1 and related proteins
Length = 113
Score = 153 bits (386), Expect = 7e-38
Identities = 71/97 (73%), Positives = 80/97 (82%)
Query: 10 RKLSDQERTRVLEFQDSIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGTLRILT 69
R L+ ER R+ F D IHYSPRY+DD +EYRHVMLPKAMLK IP+DYFN +TGTLRIL
Sbjct: 8 RLLTASERERLEPFIDQIHYSPRYADDEYEYRHVMLPKAMLKAIPTDYFNPETGTLRILQ 67
Query: 70 EDEWRGLGITQSLGWEHYECHAPEPHILLFKRPLNYE 106
E+EWRGLGITQSLGWE YE H PEPHILLFKR +Y+
Sbjct: 68 EEEWRGLGITQSLGWEMYEVHVPEPHILLFKREKDYQ 104
>At2g27970 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regulatory
subunit CKS1 and related proteins
Length = 83
Score = 98.6 bits (244), Expect = 2e-21
Identities = 44/82 (53%), Positives = 56/82 (67%), Gaps = 9/82 (10%)
Query: 27 IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGTLRILTEDEWRGLGITQSLGWEH 86
I YS +Y DDT EYRHV+LP + K++P + RIL+E EWR +G+ QS GW H
Sbjct: 4 IQYSDKYFDDTFEYRHVVLPPEVAKLLPKN---------RILSESEWRAIGVQQSRGWVH 54
Query: 87 YECHAPEPHILLFKRPLNYEAE 108
Y H PEPHI+LF+RPLNY+ E
Sbjct: 55 YAIHRPEPHIMLFRRPLNYQQE 76
>At2g27960 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regulatory
subunit CKS1 and related proteins
Length = 87
Score = 97.1 bits (240), Expect = 6e-21
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 9/82 (10%)
Query: 27 IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGTLRILTEDEWRGLGITQSLGWEH 86
I YS +Y DDT EYRHV+LP + K++P + R+L+E+EWR +G+ QS GW H
Sbjct: 4 IQYSEKYFDDTFEYRHVVLPPEVAKLLPKN---------RLLSENEWRAIGVQQSRGWVH 54
Query: 87 YECHAPEPHILLFKRPLNYEAE 108
Y H PEPHI+LF+RPLNY+ +
Sbjct: 55 YAVHRPEPHIMLFRRPLNYQQQ 76
>Hs4502859 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regulatory
subunit CKS1 and related proteins
Length = 79
Score = 90.9 bits (224), Expect = 4e-19
Identities = 40/77 (51%), Positives = 54/77 (69%), Gaps = 9/77 (11%)
Query: 27 IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGTLRILTEDEWRGLGITQSLGWEH 86
I+YS +Y D+ +EYRHVMLP+ + K +P + +++E+EWR LG+ QSLGW H
Sbjct: 6 IYYSDKYFDEHYEYRHVMLPRELSKQVPKTH---------LMSEEEWRRLGVQQSLGWVH 56
Query: 87 YECHAPEPHILLFKRPL 103
Y H PEPHILLF+RPL
Sbjct: 57 YMIHEPEPHILLFRRPL 73
>CE22913 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regulatory
subunit CKS1 and related proteins
Length = 118
Score = 90.9 bits (224), Expect = 4e-19
Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 9/81 (11%)
Query: 25 DSIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGTLRILTEDEWRGLGITQSLGW 84
+ I+YSPRY DD +EYRHV+LP+A+ + +P R+L+E EWR G+ QSLGW
Sbjct: 2 EDIYYSPRYEDDEYEYRHVILPQAVSRKVPKG---------RLLSEAEWRRAGVQQSLGW 52
Query: 85 EHYECHAPEPHILLFKRPLNY 105
EHY H PE HILLF+R ++
Sbjct: 53 EHYMVHNPEKHILLFRRKRHF 73
>Hs4502857 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regulatory
subunit CKS1 and related proteins
Length = 79
Score = 90.5 bits (223), Expect = 5e-19
Identities = 40/77 (51%), Positives = 52/77 (66%), Gaps = 9/77 (11%)
Query: 27 IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGTLRILTEDEWRGLGITQSLGWEH 86
I+YS +Y D+ EYRHVMLPK + K++P + +++E EWR LG+ QS GW H
Sbjct: 6 IYYSDKYDDEEFEYRHVMLPKDIAKLVPKTH---------LMSESEWRNLGVQQSQGWVH 56
Query: 87 YECHAPEPHILLFKRPL 103
Y H PEPHILLF+RPL
Sbjct: 57 YMIHEPEPHILLFRRPL 73
>7297507 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regulatory
subunit CKS1 and related proteins
Length = 74
Score = 87.8 bits (216), Expect = 3e-18
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 IHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGTLRILTEDEWRGLGITQSLGWEH 86
I+YS +Y D+ EYRHV+LPK ++K++P + ++TE EWR +G+ QS GW H
Sbjct: 5 IYYSDKYYDEQFEYRHVVLPKELVKMVPKTH---------LMTEAEWRSIGVQQSRGWIH 55
Query: 87 YECHAPEPHILLFKRP 102
Y H PEPHILLF+RP
Sbjct: 56 YMIHKPEPHILLFRRP 71
>7299072 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regulatory
subunit CKS1 and related proteins
Length = 96
Score = 85.1 bits (209), Expect = 2e-17
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
Query: 25 DSIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGTLRILTEDEWRGLGITQSLGW 84
D I YS +Y DD EYRHV+LP + K +P + ++TE EWR LG+ QS GW
Sbjct: 4 DQIQYSEKYFDDNFEYRHVILPPDLAKHVPKAH---------LMTETEWRNLGVQQSPGW 54
Query: 85 EHYECHAPEPHILLFKR 101
HY HAPEPH++LF+R
Sbjct: 55 VHYMVHAPEPHVILFRR 71
>CE03980 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regulatory
subunit CKS1 and related proteins
Length = 94
Score = 81.6 bits (200), Expect = 2e-16
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 9/79 (11%)
Query: 25 DSIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGTLRILTEDEWRGLGITQSLGW 84
+ +YS +Y DD EYRHV + K + K+IP + R+++E EWR LGI QS GW
Sbjct: 6 NDFYYSNKYEDDEFEYRHVHVTKDVSKLIPKN---------RLMSETEWRSLGIQQSPGW 56
Query: 85 EHYECHAPEPHILLFKRPL 103
HY H PE H+LLF+RPL
Sbjct: 57 MHYMIHGPERHVLLFRRPL 75
>Hs18573692 [D] KOG3484 Cyclin-dependent protein kinase CDC28 regulatory
subunit CKS1 and related proteins
Length = 112
Score = 60.8 bits (146), Expect = 5e-10
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 12/78 (15%)
Query: 26 SIHYSPRYSDDTHEYRHVMLPKAMLKVIPSDYFNGDTGTLRILTEDEWRGLGITQSLGWE 85
+I+YS +Y D+ ++YRHVMLP+ + K P + G T +WR LG
Sbjct: 41 AIYYSDKYFDEHYKYRHVMLPRELSKQAPETHLIGVEETY-----VQWR-------LGRV 88
Query: 86 HYECHAPEPHILLFKRPL 103
HY H PEPHILLF+ PL
Sbjct: 89 HYMIHEPEPHILLFRGPL 106
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.138 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,410,860
Number of Sequences: 60738
Number of extensions: 299927
Number of successful extensions: 513
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 494
Number of HSP's gapped (non-prelim): 11
length of query: 132
length of database: 30,389,216
effective HSP length: 94
effective length of query: 38
effective length of database: 24,679,844
effective search space: 937834072
effective search space used: 937834072
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)