ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII3923 good K KOG2680 Transcription DNA helicase TIP49, TBP-interacting protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII3923 1383929 1385329 467
(467 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL235w [K] KOG2680 DNA helicase TIP49 TBP-interacting protein 778 0.0
SPBC83.08 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein 609 e-174
Hs5730023 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein 577 e-164
At5g67630 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein 572 e-163
7293815 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein 542 e-154
At3g49830 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein 532 e-151
CE17254 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein 481 e-135
ECU11g1270 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein 354 1e-97
At5g22330 [L] KOG1942 DNA helicase TBP-interacting protein 332 7e-91
YDR190c [L] KOG1942 DNA helicase TBP-interacting protein 314 2e-85
Hs4506753 [L] KOG1942 DNA helicase TBP-interacting protein 312 8e-85
7299320 [L] KOG1942 DNA helicase TBP-interacting protein 299 5e-81
SPAPB8E5.09 [L] KOG1942 DNA helicase TBP-interacting protein 296 6e-80
CE08426 [L] KOG1942 DNA helicase TBP-interacting protein 293 3e-79
ECU09g1390 [L] KOG1942 DNA helicase TBP-interacting protein 267 3e-71
Hs20551922 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein 133 6e-31
>YPL235w [K] KOG2680 DNA helicase TIP49 TBP-interacting protein
Length = 471
Score = 778 bits (2009), Expect = 0.0
Identities = 410/470 (87%), Positives = 431/470 (91%), Gaps = 4/470 (0%)
Query: 1 MSIQTQDSQET--LKSLSLIAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKM 58
MSIQT D ET LKSLSLIAAHSHI+GLGLDENLQP+P+S+GMVGQLQARRAAGVILKM
Sbjct: 1 MSIQTSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKM 60
Query: 59 VQNGSIAGRAVLVAGPPSTGKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQA 118
VQNG+IAGRAVLVAGPPSTGKTALAMG+SQSLGKDVPFTAIAGSEIFSLELSKTEALTQA
Sbjct: 61 VQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQA 120
Query: 119 FRKSXXXXXXXXXXXXXXXXXXXQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIEGLT 178
FRKS QIDRSITGGHKQGKLTIKTTDMETIYELGNKMI+GLT
Sbjct: 121 FRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLT 180
Query: 179 KEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVS 238
KEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADT+FVQCPEGELQKRKTVVHTVS
Sbjct: 181 KEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVS 240
Query: 239 LHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHM 298
LHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHM
Sbjct: 241 LHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHM 300
Query: 299 LDIECFSFINRALEDEFAPIVIMATNRGISKTRGTNYKSPHGLPLDLLDRSIIITTKNYD 358
LDIECFSFINRALEDEFAPIV+MATNRG+SKTRGTNYKSPHGLPLDLLDRSIIITTK+Y+
Sbjct: 301 LDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYN 360
Query: 359 ASEIKTILTIRSTEEEVELSPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEV 418
EIKTIL+IR+ EEEVELS +ALDLLT G ETSLRYSSNLISV+QQIA KRK+NTVEV
Sbjct: 361 EQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEV 420
Query: 419 KDVERAYLLFLDSARSVKFVQEFESQYIDDKGQVNISIGK--DEDAMDTT 466
+DV+RAYLLFLDSARSVK+VQE ESQYIDD+G V ISI K D DAMDTT
Sbjct: 421 EDVKRAYLLFLDSARSVKYVQENESQYIDDQGNVQISIAKSADPDAMDTT 470
>SPBC83.08 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein
Length = 465
Score = 609 bits (1570), Expect = e-174
Identities = 300/441 (68%), Positives = 363/441 (82%)
Query: 8 SQETLKSLSLIAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGR 67
S + L I AHSHI G+GL++NL+PK SSQGMVGQ++ARRAAGVILKM+Q G IAGR
Sbjct: 7 SHNDVSKLERIGAHSHIKGIGLNDNLEPKESSQGMVGQVKARRAAGVILKMIQEGRIAGR 66
Query: 68 AVLVAGPPSTGKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXXXXX 127
A+L+AGPPSTGKTA+AMG++QSLG D PF ++ SE++SLE+SKTEAL QA RKS
Sbjct: 67 AILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQALRKSIGVRI 126
Query: 128 XXXXXXXXXXXXXXQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIEGLTKEKVLAGDV 187
QIDRSITGG+KQGKLTI++TDMET+Y+LG KMI+ LTKEKVLAGDV
Sbjct: 127 KEETEIIEGEVVEVQIDRSITGGNKQGKLTIRSTDMETVYDLGTKMIDSLTKEKVLAGDV 186
Query: 188 ISIDKASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINS 247
ISIDK+ G++TKLGRSF+R+RDYDAMGADT+FVQCP+GE+QKRK VVHTVSLH+IDVINS
Sbjct: 187 ISIDKSVGRVTKLGRSFSRARDYDAMGADTRFVQCPQGEIQKRKEVVHTVSLHDIDVINS 246
Query: 248 RTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFI 307
RTQGFLALF+GDTGEI+ EVR+QINTKV+EW+EEGKAEIVPGVLF+DEVHMLDIECFSF
Sbjct: 247 RTQGFLALFSGDTGEIKPEVREQINTKVSEWREEGKAEIVPGVLFVDEVHMLDIECFSFF 306
Query: 308 NRALEDEFAPIVIMATNRGISKTRGTNYKSPHGLPLDLLDRSIIITTKNYDASEIKTILT 367
NRALED+ APIVIMA+NRGI++ RGTNY+SPHG+P+DLLDR +II+T Y E+K IL
Sbjct: 307 NRALEDDLAPIVIMASNRGITRIRGTNYRSPHGIPVDLLDRMLIISTLPYSHEEVKEILK 366
Query: 368 IRSTEEEVELSPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEVKDVERAYLL 427
IR EE+V++ P ALD L+ IG ETSLRY+ LIS S Q+A KRKS T+E D+ R Y L
Sbjct: 367 IRCQEEDVDMEPSALDYLSTIGQETSLRYALLLISSSNQVALKRKSATIEESDIRRVYEL 426
Query: 428 FLDSARSVKFVQEFESQYIDD 448
FLD RSV++++E+ YI +
Sbjct: 427 FLDQKRSVEYLEEYGKNYITE 447
>Hs5730023 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein
Length = 463
Score = 577 bits (1486), Expect = e-164
Identities = 287/430 (66%), Positives = 352/430 (81%), Gaps = 1/430 (0%)
Query: 18 IAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLVAGPPST 77
I AHSHI GLGLD+ L+P+ +SQGMVGQL ARRAAGV+L+M++ G IAGRAVL+AG P T
Sbjct: 22 IGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGT 81
Query: 78 GKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXXXXXXXXXXXXXXX 137
GKTA+AMG++Q+LG D PFTAIAGSEIFSLE+SKTEALTQAFR+S
Sbjct: 82 GKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGE 141
Query: 138 XXXXQIDRSITG-GHKQGKLTIKTTDMETIYELGNKMIEGLTKEKVLAGDVISIDKASGK 196
QIDR TG G K GKLT+KTT+METIY+LG KMIE LTK+KV AGDVI+IDKA+GK
Sbjct: 142 VVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGK 201
Query: 197 ITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQGFLALF 256
I+KLGRSF R+RDYDAMG+ TKFVQCP+GELQKRK VVHTVSLHEIDVINSRTQGFLALF
Sbjct: 202 ISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALF 261
Query: 257 TGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDEFA 316
+GDTGEI+SEVR+QIN KVAEW+EEGKAEI+PGVLFIDEVHMLDIE FSF+NRALE + A
Sbjct: 262 SGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMA 321
Query: 317 PIVIMATNRGISKTRGTNYKSPHGLPLDLLDRSIIITTKNYDASEIKTILTIRSTEEEVE 376
P++IMATNRGI++ RGT+Y+SPHG+P+DLLDR +I++T Y + K IL IR EE+VE
Sbjct: 322 PVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVE 381
Query: 377 LSPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEVKDVERAYLLFLDSARSVK 436
+S +A +LT IG ETSLRY+ LI+ + + +KRK V+V D++R Y LFLD +RS +
Sbjct: 382 MSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQ 441
Query: 437 FVQEFESQYI 446
+++E++ ++
Sbjct: 442 YMKEYQDAFL 451
>At5g67630 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein
Length = 469
Score = 572 bits (1473), Expect = e-163
Identities = 288/437 (65%), Positives = 354/437 (80%), Gaps = 2/437 (0%)
Query: 12 LKSLSLIAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLV 71
L + I AHSHI GLGLD L+P+ S+GMVGQ++AR+AAGVIL+M++ G IAGRA+L+
Sbjct: 12 LTRVERIGAHSHIRGLGLDSALEPRAVSEGMVGQVKARKAAGVILQMIREGKIAGRAILI 71
Query: 72 AGPPSTGKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXXXXXXXXX 131
AG P TGKTA+AMG+++SLG + PF IAGSEIFSLE+SKTEALTQ+FRK+
Sbjct: 72 AGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEIFSLEMSKTEALTQSFRKAIGVRIKEET 131
Query: 132 XXXXXXXXXXQIDRSITGG--HKQGKLTIKTTDMETIYELGNKMIEGLTKEKVLAGDVIS 189
QIDR + G K GK+T+KTTDMET+Y++G KMIE L KEKV +GDVI+
Sbjct: 132 EVIEGEVVEVQIDRPASSGVASKSGKMTMKTTDMETVYDMGAKMIEALNKEKVQSGDVIA 191
Query: 190 IDKASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRT 249
IDKA+GKITKLGRSF+RSRDYDAMGA TKFVQCPEGELQKRK VVH V+LHEIDVINSRT
Sbjct: 192 IDKATGKITKLGRSFSRSRDYDAMGAQTKFVQCPEGELQKRKEVVHCVTLHEIDVINSRT 251
Query: 250 QGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINR 309
QGFLALFTGDTGEIRSEVR+QI+TKVAEW+EEGKAEIVPGVLFIDEVHMLDIECFSF+NR
Sbjct: 252 QGFLALFTGDTGEIRSEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHMLDIECFSFLNR 311
Query: 310 ALEDEFAPIVIMATNRGISKTRGTNYKSPHGLPLDLLDRSIIITTKNYDASEIKTILTIR 369
ALE+E +PI+++ATNRG++ RGTN KSPHG+P+DLLDR +IITT+ Y +I+ IL IR
Sbjct: 312 ALENEMSPILVVATNRGVTTIRGTNQKSPHGIPIDLLDRLLIITTQPYTDDDIRKILEIR 371
Query: 370 STEEEVELSPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEVKDVERAYLLFL 429
EE+VE++ EA LLT IG +TSLRY+ +LI+ + QKRK VEV+D++R Y LFL
Sbjct: 372 CQEEDVEMNEEAKQLLTLIGRDTSLRYAIHLITAAALSCQKRKGKVVEVEDIQRVYRLFL 431
Query: 430 DSARSVKFVQEFESQYI 446
D RS++++ E++SQY+
Sbjct: 432 DVRRSMQYLVEYQSQYM 448
>7293815 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein
Length = 481
Score = 542 bits (1396), Expect = e-154
Identities = 270/430 (62%), Positives = 338/430 (77%), Gaps = 1/430 (0%)
Query: 18 IAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLVAGPPST 77
I AHSHI GLGLD+ L+ + SQGMVGQ ARRAAGV+++MV+ G IAGR +L+AG PST
Sbjct: 18 IGAHSHIRGLGLDDVLEARLVSQGMVGQKDARRAAGVVVQMVREGKIAGRCILLAGEPST 77
Query: 78 GKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXXXXXXXXXXXXXXX 137
GKTA+A+G++Q+LG + PFT+++GSEI+SLE+SKTEAL+QA RKS
Sbjct: 78 GKTAIAVGMAQALGTETPFTSMSGSEIYSLEMSKTEALSQALRKSIGVRIKEETEIIEGE 137
Query: 138 XXXXQIDRSITG-GHKQGKLTIKTTDMETIYELGNKMIEGLTKEKVLAGDVISIDKASGK 196
QI+R +G G K GK+T+KTT+MET Y+LGNK+IE KEK+ AGDVI+IDKASGK
Sbjct: 138 VVEIQIERPASGTGQKVGKVTLKTTEMETNYDLGNKIIECFMKEKIQAGDVITIDKASGK 197
Query: 197 ITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQGFLALF 256
+ KLGRSF R+RDYDA GA T+FVQCPEGELQKRK VVHTV+LHEIDVINSRT GFLALF
Sbjct: 198 VNKLGRSFTRARDYDATGAQTRFVQCPEGELQKRKEVVHTVTLHEIDVINSRTHGFLALF 257
Query: 257 TGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDEFA 316
+GDTGEI+ EVRDQIN KV EW+EEGKAEI PGVLFIDEVHMLDIECFSF+NRALE + A
Sbjct: 258 SGDTGEIKQEVRDQINNKVLEWREEGKAEINPGVLFIDEVHMLDIECFSFLNRALESDMA 317
Query: 317 PIVIMATNRGISKTRGTNYKSPHGLPLDLLDRSIIITTKNYDASEIKTILTIRSTEEEVE 376
P+V+MATNRGI++ RGTNY+SPHG+P+DLLDR III T Y E+K IL IR EE+
Sbjct: 318 PVVVMATNRGITRIRGTNYRSPHGIPIDLLDRMIIIRTVPYSEKEVKEILKIRCEEEDCI 377
Query: 377 LSPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEVKDVERAYLLFLDSARSVK 436
+ P+AL +LT I ++TSLRY+ LI+ + + ++RK+ V +DV++ Y LFLD RS K
Sbjct: 378 MHPDALTILTRIATDTSLRYAIQLITTANLVCRRRKATEVNTEDVKKVYSLFLDENRSSK 437
Query: 437 FVQEFESQYI 446
++E++ Y+
Sbjct: 438 ILKEYQDDYM 447
>At3g49830 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein
Length = 473
Score = 532 bits (1371), Expect = e-151
Identities = 268/438 (61%), Positives = 342/438 (77%), Gaps = 3/438 (0%)
Query: 12 LKSLSLIAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLV 71
L + I AHSHI GLGLD L+P+ S+GMVGQ++AR+AAGV L+++++G I+GRA+L+
Sbjct: 12 LTRIERIGAHSHIRGLGLDSVLEPRAVSEGMVGQIKARKAAGVTLELIRDGKISGRAILI 71
Query: 72 AGPPSTGKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXXXXXXXXX 131
AG P TGK A+AMG+++SLG++ PFT IAGSEIFSLE+SKTEALTQAFRK+
Sbjct: 72 AGQPGTGKIAIAMGIAKSLGQETPFTMIAGSEIFSLEMSKTEALTQAFRKAIGVRIKEET 131
Query: 132 XXXXXXXXXXQIDRSITGG---HKQGKLTIKTTDMETIYELGNKMIEGLTKEKVLAGDVI 188
IDR + G K GK+T+KTTDME+ ++LG K+IE L KEKV +GDVI
Sbjct: 132 DVIEGEVVTISIDRPASSGGSVKKTGKITMKTTDMESNFDLGWKLIEPLDKEKVQSGDVI 191
Query: 189 SIDKASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSR 248
+D+ GKITKLGRSF RSRD+D MG+ TKFVQCPEGEL+KRK V+H+V+LHEIDVINSR
Sbjct: 192 VLDRFCGKITKLGRSFTRSRDFDVMGSKTKFVQCPEGELEKRKEVLHSVTLHEIDVINSR 251
Query: 249 TQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFIN 308
TQG+LALFTGDTGEIRSE R+Q +TKVAEW+EEGKAEIVPGVLFIDEVHMLDIECFSF+N
Sbjct: 252 TQGYLALFTGDTGEIRSETREQSDTKVAEWREEGKAEIVPGVLFIDEVHMLDIECFSFLN 311
Query: 309 RALEDEFAPIVIMATNRGISKTRGTNYKSPHGLPLDLLDRSIIITTKNYDASEIKTILTI 368
RALE++ +PI+++ATNRG++ RGTN S HG+P+D LDR +IITT+ Y EI+ IL I
Sbjct: 312 RALENDMSPILVVATNRGMTTIRGTNQISAHGIPIDFLDRLLIITTQPYTQDEIRNILEI 371
Query: 369 RSTEEEVELSPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEVKDVERAYLLF 428
R EE+VE++ EA LLT IG TSLRY+ +LI+ + KRK VE++D+ER Y LF
Sbjct: 372 RCQEEDVEMNEEAKQLLTLIGCNTSLRYAIHLINAAALACLKRKGKVVEIQDIERVYRLF 431
Query: 429 LDSARSVKFVQEFESQYI 446
LD+ RS++++ E ES+Y+
Sbjct: 432 LDTKRSMQYLVEHESEYL 449
>CE17254 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein
Length = 448
Score = 481 bits (1237), Expect = e-135
Identities = 242/429 (56%), Positives = 313/429 (72%), Gaps = 1/429 (0%)
Query: 19 AAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLVAGPPSTG 78
+ HSHI+GLGL++ L+ + S GMVGQ+ AR+AAG+I+KM+Q G IAGRA+LV G P G
Sbjct: 19 SVHSHITGLGLNDRLEAEYVSGGMVGQVAARQAAGLIVKMIQEGKIAGRALLVTGEPGAG 78
Query: 79 KTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXXXXXXXXXXXXXXXX 138
KTA+A+ +S+ LG+D PF +I SEI+S E++KTEALTQAFR++
Sbjct: 79 KTAIAIAISKELGEDTPFVSIVASEIYSNEINKTEALTQAFRRALGIQIKEETEVLEGEV 138
Query: 139 XXXQIDRSITG-GHKQGKLTIKTTDMETIYELGNKMIEGLTKEKVLAGDVISIDKASGKI 197
++DRS G G K GKLT++TTDMETIY+LG+KM++ KEKV+ GDVI +DKASG++
Sbjct: 139 ISLEVDRSANGMGPKVGKLTMRTTDMETIYDLGSKMVDACLKEKVMPGDVIQVDKASGRV 198
Query: 198 TKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQGFLALFT 257
T+LGRSF RS DYDAMG K VQCP+GE+QKR+ VHTV LH+IDVINSRTQG++ALF+
Sbjct: 199 TRLGRSFNRSHDYDAMGPKVKLVQCPDGEIQKRRETVHTVCLHDIDVINSRTQGYVALFS 258
Query: 258 GDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDEFAP 317
GDTGEI++EVRDQIN KV EW+EEGKA+ VPGVLFIDE HMLDIECFSF+NRA+E E +P
Sbjct: 259 GDTGEIKAEVRDQINKKVLEWREEGKAKFVPGVLFIDEAHMLDIECFSFLNRAIEGELSP 318
Query: 318 IVIMATNRGISKTRGTNYKSPHGLPLDLLDRSIIITTKNYDASEIKTILTIRSTEEEVEL 377
++IMATNR I K RGT+ +S HG+P D LDR +II Y + IL+IR EE V+L
Sbjct: 319 LIIMATNRLIEKVRGTDVESAHGIPSDFLDRMLIINAIPYTKEDTAKILSIRCDEEGVKL 378
Query: 378 SPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEVKDVERAYLLFLDSARSVKF 437
P ALDLL + TSLRY +LI+ S+ I + K+ V + AY LF D+ RS K
Sbjct: 379 QPTALDLLVKLQEATSLRYCIHLIAASEVIRIRSKAEIVTTDHIGSAYRLFFDTKRSEKI 438
Query: 438 VQEFESQYI 446
+ E + ++
Sbjct: 439 LTEESAGFL 447
>ECU11g1270 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein
Length = 418
Score = 354 bits (909), Expect = 1e-97
Identities = 193/425 (45%), Positives = 286/425 (66%), Gaps = 16/425 (3%)
Query: 12 LKSLSLIAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLV 71
+++++ I HSHI+GLG D + + + G+VGQ++AR+A VI KMV++ G+ VL+
Sbjct: 6 VETVNRINLHSHIAGLGCDGD-EVEYDKDGLVGQIKARKAMAVIRKMVESNK-GGKVVLI 63
Query: 72 AGPPSTGKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXXXXXXXXX 131
G +GKTALA+GLS+SLG V F +I+G+EI+SLE+SK+EA+TQA RKS
Sbjct: 64 KGDRGSGKTALAIGLSKSLG-GVHFNSISGTEIYSLEMSKSEAITQALRKSVGLRIKESV 122
Query: 132 XXXXXXXXXXQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIEGLTKEKVLAGDVISID 191
S++G ++ +KT DME+ +E+G KM L KEKV AGDVI I
Sbjct: 123 KVIEGEVV------SLSGR----RIVLKTVDMESSFEIGEKMRGELDKEKVSAGDVIRIV 172
Query: 192 KASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQG 251
+ G++ K+G S + D +G DT+FV CPEGEL + +SLH+IDV+NS+ +G
Sbjct: 173 RERGRVYKIGTSMVKRSD--VVGTDTRFVPCPEGELIRITEETQEISLHDIDVVNSKAEG 230
Query: 252 FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRAL 311
+LALF+G+TGEIR+E RD++N KV W EGKAEIV GVLFIDEVHMLDIE F+F+N+A+
Sbjct: 231 YLALFSGETGEIRAETRDEVNKKVWGWINEGKAEIVRGVLFIDEVHMLDIESFAFLNKAV 290
Query: 312 EDEFAPIVIMATNRGISKTRGTNYKSPHGLPLDLLDRSIIITTKNYDASEIKTILTIRST 371
E++F P+++++TN+G RGT+ SP+G+P D +DR++II+ + + +++ IL R
Sbjct: 291 EEDFCPVILVSTNKGECIVRGTDEPSPYGIPRDFIDRALIISMEKHCRRDLEAILRHRIL 350
Query: 372 EEEVELSPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEVKDVERAYLLFLDS 431
EE++ + +A+D L +I + LRYS NL+++S A R++ V + DVERA+ LFLD
Sbjct: 351 EEDILIDDDAVDRLVSISEASGLRYSMNLLTISSMRA-SRRNGRVALGDVERAFELFLDE 409
Query: 432 ARSVK 436
AR +
Sbjct: 410 ARGTE 414
>At5g22330 [L] KOG1942 DNA helicase TBP-interacting protein
Length = 458
Score = 332 bits (851), Expect = 7e-91
Identities = 189/457 (41%), Positives = 277/457 (60%), Gaps = 16/457 (3%)
Query: 3 IQTQDSQETLKSLSLIAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNG 62
++ ++ Q T K IA H+HI GLGL+ P + G VGQL+AR AAG+++ M++
Sbjct: 4 VKIEEIQSTAKK-QRIATHTHIKGLGLEPTGIPIKLAAGFVGQLEAREAAGLVVDMIKQK 62
Query: 63 SIAGRAVLVAGPPSTGKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKS 122
+AG+A+L+AGPP TGKTALA+G+SQ LG VPF + GSE++S E+ KTE L + FR++
Sbjct: 63 KMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRA 122
Query: 123 XXXXXXXXXXXXXXXXXXXQIDR--SITGGHKQG----KLTIKTTDMETIYELGNKMIEG 176
+ S+TGG+ + +T+KT +L + +
Sbjct: 123 IGLRIKETKEVYEGEVTELSPEETESLTGGYGKSISHVVITLKTVKGTKHLKLDPTIYDA 182
Query: 177 LTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHT 236
L KEKV GDVI I+ SG + ++GRS A + ++D + +V P+GE+ K+K +V
Sbjct: 183 LIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEE--YVPLPKGEVHKKKEIVQD 240
Query: 237 VSLHEIDVINSRTQG---FLALF----TGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPG 289
V+L ++D N+R QG L+L EI ++R +IN V + +EG AE+VPG
Sbjct: 241 VTLQDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG 300
Query: 290 VLFIDEVHMLDIECFSFINRALEDEFAPIVIMATNRGISKTRGTNYKSPHGLPLDLLDRS 349
VLFIDEVHMLD+ECFS++NRALE +PIVI ATNRG+ RGT+ SPHG+P+DLLDR
Sbjct: 301 VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGVCNVRGTDMPSPHGVPIDLLDRL 360
Query: 350 IIITTKNYDASEIKTILTIRSTEEEVELSPEALDLLTNIGSETSLRYSSNLISVSQQIAQ 409
+II T+ YD SE+ I+ IR+ EE+ + E L LL IG TSLR++ L+S + +A+
Sbjct: 361 VIIRTQIYDPSEMIQIIAIRAQVEELTVDEECLVLLGEIGQRTSLRHAVQLLSPASIVAK 420
Query: 410 KRKSNTVEVKDVERAYLLFLDSARSVKFVQEFESQYI 446
+ + D+E L+LD+ S K + E + +YI
Sbjct: 421 MNGRDNICKADIEEVTSLYLDAKSSAKLLHEQQEKYI 457
>YDR190c [L] KOG1942 DNA helicase TBP-interacting protein
Length = 463
Score = 314 bits (805), Expect = 2e-85
Identities = 176/435 (40%), Positives = 266/435 (60%), Gaps = 16/435 (3%)
Query: 19 AAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLVAGPPSTG 78
AAH+HI GLGLDE+ K G VGQ++AR A GVI+ +++ ++GRA+L+AG PSTG
Sbjct: 25 AAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTG 84
Query: 79 KTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXXXXXXXXXXXXXXXX 138
KTALA+ +SQ LG VPF + GSE++S+E+ KTE L + FR++
Sbjct: 85 KTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEV 144
Query: 139 XXXQIDRSITGGHKQGK------LTIKTTDMETIYELGNKMIEGLTKEKVLAGDVISIDK 192
+ + GK + +K+ L + E + +EKV GDVI I+
Sbjct: 145 TELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREKVSIGDVIYIEA 204
Query: 193 ASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQG- 251
+G + ++GRS A + ++D ++V P+GE+ K+K +V V+LH++DV N+R QG
Sbjct: 205 NTGAVKRVGRSDAYATEFDL--ETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQGG 262
Query: 252 ------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFS 305
L EI ++R ++N VA++ ++G AE++PGVLFIDEV+MLDIE F+
Sbjct: 263 QDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAELIPGVLFIDEVNMLDIEIFT 322
Query: 306 FINRALEDEFAPIVIMATNRGISKTRGT-NYKSPHGLPLDLLDRSIIITTKNYDASEIKT 364
++N+ALE AP+V++A+NRG++ RGT + SPHG+P DL+DR +I+ T YD EI+T
Sbjct: 323 YLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDRLLIVRTLPYDKDEIRT 382
Query: 365 ILTIRSTEEEVELSPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEVKDVERA 424
I+ R+T E +++ ALDLL +G+ETSLRY+ L++ +AQ + V DV A
Sbjct: 383 IIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPCGILAQTSNRKEIVVNDVNEA 442
Query: 425 YLLFLDSARSVKFVQ 439
LLFLD+ RS K ++
Sbjct: 443 KLLFLDAKRSTKILE 457
>Hs4506753 [L] KOG1942 DNA helicase TBP-interacting protein
Length = 456
Score = 312 bits (799), Expect = 8e-85
Identities = 178/443 (40%), Positives = 267/443 (60%), Gaps = 16/443 (3%)
Query: 18 IAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLVAGPPST 77
IA+HSH+ GLGLDE+ K ++ G+VGQ AR A GVI++++++ +AGRAVL+AGPP T
Sbjct: 15 IASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGT 74
Query: 78 GKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXXXXXXXXXXXXXXX 137
GKTALA+ ++Q LG VPF + GSE++S E+ KTE L + FR++
Sbjct: 75 GKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGE 134
Query: 138 XXXXQIDRSITGGHKQGK------LTIKTTDMETIYELGNKMIEGLTKEKVLAGDVISID 191
+ GK + +KT +L + E L KE+V AGDVI I+
Sbjct: 135 VTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIE 194
Query: 192 KASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQG 251
SG + + GR + ++D + +V P+G++ K+K ++ V+LH++DV N+R QG
Sbjct: 195 ANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKKKEIIQDVTLHDLDVANARPQG 252
Query: 252 -------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECF 304
L EI ++R +IN V ++ ++G AE+VPGVLF+DEVHMLDIECF
Sbjct: 253 GQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECF 312
Query: 305 SFINRALEDEFAPIVIMATNRGISKTRGT-NYKSPHGLPLDLLDRSIIITTKNYDASEIK 363
++++RALE APIVI A+NRG RGT + SPHG+PLDLLDR +II T Y E+K
Sbjct: 313 TYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMK 372
Query: 364 TILTIRSTEEEVELSPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEVKDVER 423
I+ IR+ E + +S EAL+ L IG++T+LRYS L++ + +A+ +++E + VE
Sbjct: 373 QIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEE 432
Query: 424 AYLLFLDSARSVKFVQEFESQYI 446
LF D+ S K + + + +Y+
Sbjct: 433 ISELFYDAKSSAKILADQQDKYM 455
>7299320 [L] KOG1942 DNA helicase TBP-interacting protein
Length = 456
Score = 299 bits (766), Expect = 5e-81
Identities = 171/443 (38%), Positives = 263/443 (58%), Gaps = 16/443 (3%)
Query: 18 IAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLVAGPPST 77
IAAHSH+ GLGLDE S+ G+VGQ AR AAG+++ ++++ +AGRA+L+AGPP T
Sbjct: 15 IAAHSHVKGLGLDEVGAAVHSAAGLVGQKAAREAAGIVVDLIKSKKMAGRALLLAGPPGT 74
Query: 78 GKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXXXXXXXXXXXXXXX 137
GKTA+A+ ++Q LG VPF + GSE+FS E+ KTE L + FR+S
Sbjct: 75 GKTAIALAIAQELGNKVPFCPMVGSEVFSNEIKKTEVLMENFRRSIGLRIRETKEVYEGE 134
Query: 138 XXXXQIDRSITGGHKQGK------LTIKTTDMETIYELGNKMIEGLTKEKVLAGDVISID 191
+ GK + +KT +L + + L KEKV GDVI I+
Sbjct: 135 VTELTPVETENPMGGYGKTISNVVIGLKTAKGTKQLKLDPSIFDALQKEKVEVGDVIYIE 194
Query: 192 KASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQG 251
SG + + GRS + ++D ++V P+G++ K+K V+ V+LH++DV N+R QG
Sbjct: 195 ANSGAVKRQGRSDTFATEFDL--ETEEYVPLPKGDVHKKKEVIQDVTLHDLDVANARPQG 252
Query: 252 -------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECF 304
L EI ++R +IN V ++ ++G AE+VPGVLFIDE+HMLD+E F
Sbjct: 253 GQDVLSMMGQLMKPKKTEITDKLRMEINKVVNKYIDQGIAELVPGVLFIDEIHMLDLETF 312
Query: 305 SFINRALEDEFAPIVIMATNRGISKTRGT-NYKSPHGLPLDLLDRSIIITTKNYDASEIK 363
++++++LE APIVI ATNRG RGT + SPHG+PLDLLDR +II T Y ++++
Sbjct: 313 TYLHKSLESPIAPIVIFATNRGRCVIRGTTDIVSPHGIPLDLLDRLLIIRTLLYSTADME 372
Query: 364 TILTIRSTEEEVELSPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEVKDVER 423
I+ +R+ E ++L A L+ IG+ ++LRY+ L++ + Q+ + N + D+E
Sbjct: 373 QIIKLRAQTEGLQLEENAFTRLSEIGTSSTLRYAVQLLTPAHQMCKVNGRNQISKDDIED 432
Query: 424 AYLLFLDSARSVKFVQEFESQYI 446
+ LFLD+ RS K + E ++++
Sbjct: 433 VHSLFLDAKRSSKHLSEKNNKFM 455
>SPAPB8E5.09 [L] KOG1942 DNA helicase TBP-interacting protein
Length = 456
Score = 296 bits (757), Expect = 6e-80
Identities = 174/436 (39%), Positives = 253/436 (57%), Gaps = 16/436 (3%)
Query: 18 IAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLVAGPPST 77
I HSHI GLGL E+ + G +GQ +AR A G+I ++++ G+ VL AG T
Sbjct: 16 ITTHSHIKGLGLKEDGTCESVGGGFIGQEKAREACGIITDLIKSKKFGGKGVLFAGGAGT 75
Query: 78 GKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXXXXXXXXXXXXXXX 137
GKTALA+ ++Q LG VPF + GSE++S E+ KTEAL + FR++
Sbjct: 76 GKTALALAIAQELGPKVPFCPMVGSEVYSSEIKKTEALMENFRRAIGLRVKETKEVYEGE 135
Query: 138 XXXXQIDRSITGGHKQGK------LTIKTTDMETIYELGNKMIEGLTKEKVLAGDVISID 191
+ + GK L +KT +L + E L +E+V GDVI I+
Sbjct: 136 VTEMVPEEAENPLGGYGKTISHVLLGLKTHKGTKQLKLDPSIYESLQREQVSTGDVIYIE 195
Query: 192 KASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQG 251
+G + ++GRS A + ++D + +V P+GE+ KRK +V V+LH++D+ N+R QG
Sbjct: 196 ANTGAVKRVGRSDAYATEFDLEAEE--YVPMPKGEVHKRKEIVQDVTLHDLDIANARPQG 253
Query: 252 -------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECF 304
L EI ++R +IN V ++ E+G AE++PGVLFIDEVHMLDIECF
Sbjct: 254 GQDIMSMMGQLMKPKKTEITDKLRGEINKVVNKYIEQGIAELIPGVLFIDEVHMLDIECF 313
Query: 305 SFINRALEDEFAPIVIMATNRGISKTRGT-NYKSPHGLPLDLLDRSIIITTKNYDASEIK 363
+++N+ALE +PIVI A+NRGI RGT + ++PHG+P DLLDR +I+ T Y SEI+
Sbjct: 314 TYLNQALESTISPIVIFASNRGICTIRGTEDIQAPHGIPTDLLDRLLIVRTLPYSESEIR 373
Query: 364 TILTIRSTEEEVELSPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEVKDVER 423
+IL IR+ E + L+ E LD L GS TSLRY L++ IA + + V+D+E
Sbjct: 374 SILQIRAKVENIILTDECLDKLAQEGSRTSLRYVIQLLTPVSIIASLHGNKEIGVQDIEE 433
Query: 424 AYLLFLDSARSVKFVQ 439
LFLD+ RS + V+
Sbjct: 434 CNDLFLDARRSAQVVK 449
>CE08426 [L] KOG1942 DNA helicase TBP-interacting protein
Length = 458
Score = 293 bits (751), Expect = 3e-79
Identities = 172/451 (38%), Positives = 259/451 (57%), Gaps = 38/451 (8%)
Query: 6 QDSQETLKSLSLIAAHSHISGLGLD-ENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSI 64
++ + T K + IAAHSH+ GLG+D E + + G VGQ AR AA +++ M++ +
Sbjct: 21 EEVKPTPKQIKRIAAHSHVKGLGIDTETQEAHYEAAGFVGQAPARTAASIVVDMIRLKCM 80
Query: 65 AGRAVLVAGPPSTGKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXX 124
AGRAVL+AGPP+TGKTA+A+ +SQ LG VPF + SE+FS E+ KTE L ++FR++
Sbjct: 81 AGRAVLIAGPPATGKTAIALAMSQELGDGVPFVPLVASEVFSNEVKKTEVLMRSFRRAIG 140
Query: 125 XXXXXXXXXXXXXXXXXQ-IDRSITGGHKQGK------LTIKTTDMETIYELGNKMIEGL 177
++ S G GK L++KT +L + + +
Sbjct: 141 LRVKETKDVYEGEVTELSPVEASDNSG--MGKTISHLVLSLKTAKGSKQLKLDPSIYDSI 198
Query: 178 TKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTV 237
K++V GDVI I+ SG + ++GR + ++D + AD +FV P+G+++K K +V V
Sbjct: 199 LKQRVEVGDVIYIEANSGIVKRVGRCDVYASEFD-LEAD-EFVPMPKGDVRKSKDIVQNV 256
Query: 238 SLHEIDVINSRTQG--------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPG 289
SLH++D+ N+R QG L T E+ +R +IN V E+ E G AE++PG
Sbjct: 257 SLHDLDIANARPQGRQGDVSNIVSQLMTPKKTEVTDRLRSEINKVVNEYIESGVAELMPG 316
Query: 290 VLFIDEVHMLDIECFSFINRALEDEFAPIVIMATNRGISKTRGTNYKSPHGLPLDLLDRS 349
VLFIDEVHMLD+ECF+++ RALE AP+V+ ATNRG + RG K+PHG+P ++LDR
Sbjct: 317 VLFIDEVHMLDVECFTYLYRALESPMAPVVVFATNRGTTTVRGLGDKAPHGIPPEMLDRL 376
Query: 350 IIITTKNYDASEIKTILTIRSTEEEVELSPEALDLLTNIGSETSLRYSSNLISVSQQIAQ 409
+II T Y+ +I+ IL R+ E V+ +A DLLT + ++T R
Sbjct: 377 MIIPTMKYNEEDIRKILVHRTEAENVQFEEKAFDLLTRLCAQTCGR-------------- 422
Query: 410 KRKSNTVEVKDVERAYLLFLDSARSVKFVQE 440
+EV+DV+R LF+D S+K +E
Sbjct: 423 ----EVIEVEDVDRCTKLFMDRGESLKKAEE 449
>ECU09g1390 [L] KOG1942 DNA helicase TBP-interacting protein
Length = 426
Score = 267 bits (682), Expect = 3e-71
Identities = 160/429 (37%), Positives = 247/429 (57%), Gaps = 20/429 (4%)
Query: 16 SLIAAHSHISGLGLDENLQPKPSSQGMVGQLQARRAAGVILKMVQNGSIAGRAVLVAGPP 75
S IA HSH+ LGLD+ P ++GQ AR AAG+I++MV+ ++GRAVL++GP
Sbjct: 5 SNIAIHSHVRSLGLDDCGNPVEKPDAVIGQENAREAAGLIVEMVRTKRMSGRAVLISGPV 64
Query: 76 STGKTALAMGLSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSXXXXXXXXXXXXX 135
+GKTALA+G+S+ LG PFT+++GSE++S E+ KTE L +A R+S
Sbjct: 65 GSGKTALAVGISEELGAGTPFTSMSGSEVYSNEVKKTEVLEEALRRSILVRMRELKDVYE 124
Query: 136 XXXXXXQI---DRSITGGHKQGK---LTIKTTDMETIYELGNKMIEGLTKEKVLAGDVIS 189
+I + ++ K+ K + +KT+ +L + E + K++++ GDV+
Sbjct: 125 GEVVELRIVDEENPLSSYPKRIKEMFVILKTSKESKKLKLAPSLYEQIDKQRIVNGDVVY 184
Query: 190 IDKASGKITKLGRSFARSRDYDAMGADTKFVQCPEGELQKRKTVVHTVSLHEIDVINSRT 249
I+ SG I KLGRS A D+D + ADT +V P+GE+ KRK V+ +V+LH++D+ N+R
Sbjct: 185 IEVNSGVIKKLGRSEAHMNDFD-LEADT-YVPIPKGEVLKRKEVMQSVTLHDLDMANARP 242
Query: 250 QG------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIEC 303
G + + EI +R +N V + E G AEIVPGVLFIDEVHMLD+EC
Sbjct: 243 SGQDMLSLVFRILSPRKTEITERLRGDVNRMVNGYLENGNAEIVPGVLFIDEVHMLDVEC 302
Query: 304 FSFINRALEDEFAPIVIMATNRGISKTRGTN-YKSPHGLPLDLLDRSIIITTKNYDASEI 362
F+F+++ +E +P +I A+N+G++ +G++ P G+ DLLDR +II+ K
Sbjct: 303 FTFLHKVIESPLSPTIIFASNKGMAPIKGSDGLLGPFGITKDLLDRIVIISVKRNPDEAN 362
Query: 363 KTILTIRSTEEEVELSPEALDLLTNIGSETSLRYSSNLISVSQQIAQKRKSNTVEVKDVE 422
+ I+ R EE +E+ +A + + SLRY +LI + K V V++VE
Sbjct: 363 REIIRRRMKEEGLEMDDDAFGFFVGLSTSRSLRYCISLIPL-----LKTYGGCVSVRNVE 417
Query: 423 RAYLLFLDS 431
LF DS
Sbjct: 418 EVAELFHDS 426
>Hs20551922 [K] KOG2680 DNA helicase TIP49 TBP-interacting protein
Length = 191
Score = 133 bits (334), Expect = 6e-31
Identities = 83/143 (58%), Positives = 95/143 (66%), Gaps = 4/143 (2%)
Query: 98 AIAGSEIFSLELSKTEALTQAFRKSXXXXXXXXXXXXXXXXXXXQIDRSITG-GHKQGKL 156
AI GSEI SLE+SKT+ALTQAF S QI R +TG G K GKL
Sbjct: 33 AITGSEI-SLEMSKTQALTQAFWPSFGIHFKEEMEIIEGEVVETQIYRPVTGMGSKVGKL 91
Query: 157 TIKTTDMETIYELGNKMIEGLTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGAD 216
T KT METIY+LG KMIE LTK+K+ AGD+I+IDKA GKI+KLG SF S DY+ M +
Sbjct: 92 TNKTKKMETIYDLGMKMIESLTKDKIHAGDMITIDKAMGKISKLGHSFTWSGDYNPMDSQ 151
Query: 217 TKFVQCPEGELQKRKTVVHTVSL 239
TKF Q P G+LQK K VHTVSL
Sbjct: 152 TKFRQPPYGKLQKCK--VHTVSL 172
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.131 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,592,198
Number of Sequences: 60738
Number of extensions: 922374
Number of successful extensions: 2718
Number of sequences better than 1.0e-05: 16
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2658
Number of HSP's gapped (non-prelim): 20
length of query: 467
length of database: 30,389,216
effective HSP length: 110
effective length of query: 357
effective length of database: 23,708,036
effective search space: 8463768852
effective search space used: 8463768852
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)