ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII4240 good DR KOG3433 Cell cycle control, cell division, chromosome partitioning Protein involved in meiotic recombination/predicted coiled-coil protein
r_klactIII4240 good DR KOG3433 General function prediction only Protein involved in meiotic recombination/predicted coiled-coil protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII4240 1496556 1495882 -225
(225 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL183c [DR] KOG3433 Protein involved in meiotic recombination/p... 115 4e-26
Hs14149769 [DR] KOG3433 Protein involved in meiotic recombinatio... 75 6e-14
ECU10g1600 [DR] KOG3433 Protein involved in meiotic recombinatio... 64 2e-10
SPAC13A11.03 [DR] KOG3433 Protein involved in meiotic recombinat... 54 1e-07
>YGL183c [DR] KOG3433 Protein involved in meiotic recombination/predicted
coiled-coil protein
Length = 174
Score = 115 bits (289), Expect = 4e-26
Identities = 60/174 (34%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
Query: 46 MLVKVLVQKMIDEDGLISVEKCGNINVYWSFKNQMQNKLNSDASNIEKRIEHEKSEIARC 105
M+VK LVQ+MIDEDG+ISVEKCGNIN+YW FKNQ KL + I+K+I+ K +IA
Sbjct: 1 MIVKDLVQQMIDEDGVISVEKCGNINIYWCFKNQTLQKLYDSSELIKKKIQEVKCDIATY 60
Query: 106 -QELYQKEIQGQRSDTLKNRRGWKRSAQLSKLKEVQKTIRELNSKYEELSKNNWTPQRIK 164
QEL + G+R ++ + R A L K K++Q I++ ++ +++ W +I+
Sbjct: 61 KQELDKTLATGRRKKFTVGQKSYNREALLEKRKKIQDEIKKKSNSLQKIESIRWDAAKIQ 120
Query: 165 QEKHNLFEKASFAVGLADNIDCITGHISSTYCVQMSDLKVELELPNEFNQFETI 218
+ K + K DNI+ + ++ + ++ ++ E +P EF +F +
Sbjct: 121 ENKQQIRLKKVHLEKTTDNIEILIDYLYKKFFLKPEQIRKEFGIPEEFKEFTEV 174
>Hs14149769 [DR] KOG3433 Protein involved in meiotic recombination/predicted
coiled-coil protein
Length = 205
Score = 75.5 bits (184), Expect = 6e-14
Identities = 51/173 (29%), Positives = 94/173 (53%), Gaps = 24/173 (13%)
Query: 5 KNTVSLAEKKARILRFFQEEHTVYNMKELEKYIPKKCGISSMLVKVLVQKMIDEDGLISV 64
K +S EK+ R++ F E V+ +K+LEK PK+ GI++M VK ++Q ++D DG++
Sbjct: 4 KKGLSAEEKRTRMMEIFSETKDVFQLKDLEKIAPKEKGITAMSVKEVLQSLVD-DGMVDC 62
Query: 65 EKCGNINVYWSFKNQ-----------MQNKLNSDA---SNIEKRIEHEKSEIARCQELYQ 110
E+ G N YW+F ++ ++++L+ + ++++K I EK++I RC+ +
Sbjct: 63 ERIGTSNYYWAFPSKALHARKHKLEVLESQLSEGSQKHASLQKSI--EKAKIGRCETEER 120
Query: 111 KEIQGQRSDTLKNRRGWKRSAQLSKLK----EVQKTIRELNSKYEELSKNNWT 159
+ + S R K A++ K K +V + IR+ N +E + N WT
Sbjct: 121 TRLAKELSSLRDQREQLK--AEVEKYKDCDPQVVEEIRQANKVAKE-AANRWT 170
>ECU10g1600 [DR] KOG3433 Protein involved in meiotic recombination/predicted
coiled-coil protein
Length = 203
Score = 63.5 bits (153), Expect = 2e-10
Identities = 48/205 (23%), Positives = 95/205 (45%), Gaps = 11/205 (5%)
Query: 12 EKKARILRFFQEEHTVYNMKELEKYIPKKCGISSMLVKVLVQKMIDEDGLISVEKCGNIN 71
+KK+ +L + + + ++ELE KK GI +K ++Q+++D DGL++ EK G N
Sbjct: 10 QKKSILLEIIRGSKSFFKLQELESLGSKK-GIVVNTIKEILQQLVD-DGLVTAEKVGTSN 67
Query: 72 VYWSFKNQMQNKLNSDASNIEKRIEHEKSEIARCQELYQKEIQGQRSDTLKNRRGWKRSA 131
+YWSF ++ K + + E +I R +E + E + +N +
Sbjct: 68 LYWSFASEGIQKKKLRCKELMEECERMSQDICRKREYIENEKMSKHYTEERN----ELEN 123
Query: 132 QLSKLKEVQKTIRELNSKYEELSKNNWTPQRIKQEKHNLFEKASFAVGLADNIDCITGHI 191
+L+ L ++++ RE K+EE P + + E A + DN+ I +I
Sbjct: 124 KLNALMKIEQDQREELGKFEETD-----PIAYDKLVADRKEMADECNRIIDNVFIIQDYI 178
Query: 192 SSTYCVQMSDLKVELELPNEFNQFE 216
S + ++ S+ +P + + +
Sbjct: 179 CSKFPMEKSEFNSSFGIPPDLDYIQ 203
>SPAC13A11.03 [DR] KOG3433 Protein involved in meiotic recombination/predicted
coiled-coil protein
Length = 210
Score = 54.3 bits (129), Expect = 1e-07
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 8 VSLAEKKARILRFFQEEHTVYNMKELEKYIPKKCGISSMLVKVLVQKMIDEDGLISVEKC 67
+SLAEK+ R+ F + + +KE+EK KK I VK ++Q ++D D ++ EK
Sbjct: 6 LSLAEKRRRLEAIFHDSKDFFQLKEVEKLGSKK-QIVLQTVKDVLQSLVD-DNIVKTEKI 63
Query: 68 GNINVYWSFKNQMQNKLNSDASNIEKRIEHEKSEIARCQELYQKEIQGQRSDTLKNRRG- 126
G N YWSF + + S +++ +++ K + E E + ++ +N
Sbjct: 64 GTSNYYWSFPSDAKRSRESVLGSLQAQLDDLKQKSKTLDENISFEKSKRDNEGTENDANQ 123
Query: 127 ------WKRSAQLSKLKEVQKTIRELNSKYEELSKNNWTPQRIKQEKHNLF-EKASFAVG 179
+ ++L LK + N + EL N + E NL+ ++ +
Sbjct: 124 YTLELLHAKESELKLLKTQLSNLNHCNPETFELKNEN---TKKYMEAANLWTDQIHTLIA 180
Query: 180 LADNIDCITGHISSTYCVQMSDLKVELELP 209
++ T I YC DL +L+LP
Sbjct: 181 FCRDMGADTNQIRE-YCSIPEDLD-DLQLP 208
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.131 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,930,301
Number of Sequences: 60738
Number of extensions: 507568
Number of successful extensions: 1904
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1898
Number of HSP's gapped (non-prelim): 5
length of query: 225
length of database: 30,389,216
effective HSP length: 102
effective length of query: 123
effective length of database: 24,193,940
effective search space: 2975854620
effective search space used: 2975854620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)