ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIII4342  suspect: LH   C     KOG4103  Energy production and conversion                               Mitochondrial F1F0-ATP synthase, subunit g/ATP20

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII4342 1532337 1531981 -119 
         (119 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPR020w [C] KOG4103 Mitochondrial F1F0-ATP synthase subunit g/ATP20   140   4e-34

>YPR020w [C] KOG4103 Mitochondrial F1F0-ATP synthase subunit g/ATP20
          Length = 115

 Score =  140 bits (352), Expect = 4e-34
 Identities = 63/115 (54%), Positives = 91/115 (78%)

Query: 1   MISRVQSLVSSLTHKTQSLLTKTVYYGKVTAELSKQVYTKEGLQPPNFSDFEMVYTRLYR 60
           M+SR+Q+  S L  K   L +K +YYGKV AE+SKQ+Y KEGLQPP  + F+ VY+ LY+
Sbjct: 1   MLSRIQNYTSGLVSKANLLSSKALYYGKVGAEISKQIYLKEGLQPPTVAQFKSVYSNLYK 60

Query: 61  QALGYADKPQQVVNLLKNIEKDQAVKIGAFGVQLLGLYSLGEIIGRRKVVGYRNY 115
           Q+L +A KP +V++ LKNI+K++ +K GA+G+QL+G YS+GEIIGRRK+VGY+++
Sbjct: 61  QSLNFALKPTEVLSCLKNIQKNELLKYGAYGIQLIGFYSVGEIIGRRKLVGYKHH 115


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.318    0.135    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,280,135
Number of Sequences: 60738
Number of extensions: 221362
Number of successful extensions: 536
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 535
Number of HSP's gapped (non-prelim): 1
length of query: 119
length of database: 30,389,216
effective HSP length: 95
effective length of query: 24
effective length of database: 24,619,106
effective search space: 590858544
effective search space used: 590858544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)