ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII4361.1 suspect: Pn T KOG0230 Signal transduction mechanisms Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII4361.1 1538461 1538697 79
(79 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YFR019w [T] KOG0230 Phosphatidylinositol-4-phosphate 5-kinase an... 32 0.16
At2g46740 [V] KOG4730 D-arabinono-1 4-lactone oxidase 28 2.2
At4g16200 [A] KOG0007 Splicing factor 3a subunit 1 28 2.9
SPBC20F10.07 [S] KOG1032 Uncharacterized conserved protein conta... 27 5.0
YCR079w [T] KOG0698 Serine/threonine protein phosphatase 27 6.5
At3g19210 [L] KOG0390 DNA repair protein SNF2 family 26 8.5
>YFR019w [T] KOG0230 Phosphatidylinositol-4-phosphate 5-kinase and related
FYVE finger-containing proteins
Length = 2278
Score = 32.0 bits (71), Expect = 0.16
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 27 AIEIVCCSITSCNTDLVLSFILSNSSI-QHTPPSERTKAPLSNTSCLVSTS 76
++ I+ S TS TDLV + ILSN S+ + +PP+ + A ++TS + T+
Sbjct: 45 SLHIMSTSTTSTTTDLVTNPILSNISVPKISPPTSSSIATATSTSHVTGTA 95
>At2g46740 [V] KOG4730 D-arabinono-1 4-lactone oxidase
Length = 590
Score = 28.1 bits (61), Expect = 2.2
Identities = 18/53 (33%), Positives = 24/53 (44%), Gaps = 1/53 (1%)
Query: 25 AFAIEIVCCSITSCNTDLVLSFILSNSSIQHTPPSERTKAPLSNTSCLVSTSL 77
AF CS L F L ++ I TPP + K NT+C+V+ SL
Sbjct: 2 AFGYSPSYCSFWRTLLGLYCLFTLVHTVIS-TPPEDPVKCVSGNTNCIVTNSL 53
>At4g16200 [A] KOG0007 Splicing factor 3a subunit 1
Length = 288
Score = 27.7 bits (60), Expect = 2.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 49 SNSSIQHTPPSERTKAPLSNTSCLVS 74
S+ I H PP+ T A + TSCLVS
Sbjct: 88 SDIKIFHAPPNVTTTAIVETTSCLVS 113
>SPBC20F10.07 [S] KOG1032 Uncharacterized conserved protein contains GRAM domain
Length = 764
Score = 26.9 bits (58), Expect = 5.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 34 SITSCNTDLVLSFILSNSSIQHTPPSERTKAPLSNTSC 71
S+ N D + +LS S + PP+E T +PL++ C
Sbjct: 400 SVKKMNEDGADTSLLSVSEVTSHPPTEWTGSPLAHVLC 437
>YCR079w [T] KOG0698 Serine/threonine protein phosphatase
Length = 442
Score = 26.6 bits (57), Expect = 6.5
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 43 VLSFILSNSSIQHTPPSERTKAPLSNTSCLVS 74
+ SF++ N+ H P SER+K P + C ++
Sbjct: 320 IFSFLVGNTL--HLPRSERSKLPFNGDECFLA 349
>At3g19210 [L] KOG0390 DNA repair protein SNF2 family
Length = 688
Score = 26.2 bits (56), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (57%)
Query: 23 IPAFAIEIVCCSITSCNTDLVLSFILSNS 51
+P IE+VCC +T+ + L FI S +
Sbjct: 326 LPPKIIEVVCCKMTTLQSTLYNHFISSKN 354
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.324 0.134 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,035,325
Number of Sequences: 60738
Number of extensions: 123592
Number of successful extensions: 442
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 437
Number of HSP's gapped (non-prelim): 6
length of query: 79
length of database: 30,389,216
effective HSP length: 55
effective length of query: 24
effective length of database: 27,048,626
effective search space: 649167024
effective search space used: 649167024
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)