ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII4388 check: MH K KOG0384 Transcription Chromodomain-helicase DNA-binding protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII4388 1547890 1552464 1525
(1525 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein 1787 0.0
SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein 1148 0.0
SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein 1017 0.0
Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein 726 0.0
Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein 687 0.0
CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein 686 0.0
7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein 672 0.0
At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein 607 e-173
Hs4557451 [R] KOG0383 Predicted helicase 492 e-138
At2g25170 [R] KOG0383 Predicted helicase 486 e-136
At5g44800 [R] KOG0383 Predicted helicase 483 e-136
Hs20533808 [R] KOG0383 Predicted helicase 480 e-135
Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein 477 e-134
CE03657 [R] KOG0383 Predicted helicase 474 e-133
Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein 474 e-133
Hs4557453 [R] KOG0383 Predicted helicase 472 e-132
Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein 472 e-132
CE17716 [R] KOG0383 Predicted helicase 470 e-132
7293795 [R] KOG0383 Predicted helicase 467 e-131
CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein 450 e-126
YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 439 e-122
7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 429 e-119
At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 421 e-117
Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 421 e-117
CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 416 e-115
Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 415 e-115
At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 414 e-115
YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 412 e-114
YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 411 e-114
7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 404 e-112
ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein 398 e-110
CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 396 e-109
Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 395 e-109
Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 395 e-109
Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 392 e-108
At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 392 e-108
CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 390 e-108
SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF co... 389 e-107
Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 388 e-107
At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 386 e-106
YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 385 e-106
Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 376 e-103
At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 364 e-100
SPBP35G2.10 [R] KOG0383 Predicted helicase 357 6e-98
ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 353 9e-97
At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 336 2e-91
Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 313 1e-84
At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 309 3e-83
At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 308 3e-83
YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 307 7e-83
CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase 288 5e-77
7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase 281 6e-75
Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase 276 2e-73
At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase 269 2e-71
YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 261 6e-69
SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase 256 2e-67
SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase 253 2e-66
YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 251 8e-66
7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein 250 1e-65
YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase 249 2e-65
SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain... 249 3e-65
Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein 246 3e-64
Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/... 245 3e-64
ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 245 4e-64
7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 242 4e-63
At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/... 239 3e-62
At4g31900 [R] KOG0383 Predicted helicase 238 5e-62
SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein C... 238 7e-62
Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 232 3e-60
ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB... 231 7e-60
YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase 221 9e-57
Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase 216 2e-55
CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase 214 8e-55
At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase 213 1e-54
At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-co... 213 2e-54
Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family 209 4e-53
YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase 207 1e-52
SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family 205 4e-52
CE25143 [L] KOG0390 DNA repair protein SNF2 family 204 7e-52
YGL163c [L] KOG0390 DNA repair protein SNF2 family 204 9e-52
Hs4506397 [L] KOG0390 DNA repair protein SNF2 family 201 6e-51
7295868 [L] KOG0390 DNA repair protein SNF2 family 201 1e-50
CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 200 2e-50
CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 198 5e-50
At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase 197 1e-49
SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family 193 2e-48
ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase 187 1e-46
At3g19210 [L] KOG0390 DNA repair protein SNF2 family 186 2e-46
YBR073w [L] KOG0390 DNA repair protein SNF2 family 180 1e-44
At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/... 179 2e-44
HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein 179 3e-44
Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase 177 1e-43
SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase 171 8e-42
Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 171 8e-42
7293730 [R] KOG0383 Predicted helicase 167 1e-40
HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 166 3e-40
7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase 165 5e-40
SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase 163 2e-39
CE23323 [L] KOG0390 DNA repair protein SNF2 family 162 3e-39
At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box ... 156 3e-37
At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/... 129 3e-29
At3g24340 [L] KOG0390 DNA repair protein SNF2 family 119 5e-26
Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 118 8e-26
CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 118 8e-26
CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 118 8e-26
Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 114 9e-25
Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 108 9e-23
Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 108 9e-23
Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 108 9e-23
7298963 [KL] KOG4439 RNA polymerase II transcription termination... 107 1e-22
At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 107 2e-22
SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF c... 105 6e-22
At1g05480 [L] KOG0390 DNA repair protein SNF2 family 103 2e-21
CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 99 4e-20
SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF... 99 7e-20
At2g21450 [L] KOG0390 DNA repair protein SNF2 family 99 7e-20
7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 99 7e-20
At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 98 1e-19
At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 98 1e-19
Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/... 96 3e-19
Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 96 3e-19
At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16 95 7e-19
SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF... 95 1e-18
At2g16390 [L] KOG0390 DNA repair protein SNF2 family 94 2e-18
Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase 92 5e-18
At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 92 5e-18
At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 92 6e-18
7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 92 8e-18
At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 91 1e-17
SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF... 91 2e-17
YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16 90 2e-17
At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 90 3e-17
At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16 90 3e-17
CE11083 [KL] KOG4439 RNA polymerase II transcription termination... 89 5e-17
At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 87 2e-16
SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16 86 3e-16
CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 86 5e-16
Hs19923174 [KL] KOG4439 RNA polymerase II transcription terminat... 86 6e-16
CE14110 [KL] KOG4439 RNA polymerase II transcription termination... 85 8e-16
At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 85 8e-16
At3g42670 [L] KOG0390 DNA repair protein SNF2 family 83 4e-15
YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 81 1e-14
CE11450 [KL] KOG4439 RNA polymerase II transcription termination... 81 1e-14
Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein 80 2e-14
7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 77 3e-13
At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 76 4e-13
7298962 [KL] KOG4439 RNA polymerase II transcription termination... 76 5e-13
At5g20420 [L] KOG0390 DNA repair protein SNF2 family 75 8e-13
ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 74 1e-12
YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 74 2e-12
SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLT... 66 4e-10
At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcri... 65 6e-10
SPAC144.05 [L] KOG0298 DEAD box-containing helicase-like transcr... 63 4e-09
7295362 [L] KOG0298 DEAD box-containing helicase-like transcript... 63 4e-09
YLR247c [L] KOG0298 DEAD box-containing helicase-like transcript... 61 1e-08
Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 57 2e-07
CE23294 [KL] KOG4439 RNA polymerase II transcription termination... 56 4e-07
Hs22054523 [L] KOG0298 DEAD box-containing helicase-like transcr... 54 2e-06
>YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1468
Score = 1787 bits (4629), Expect = 0.0
Identities = 940/1539 (61%), Positives = 1120/1539 (72%), Gaps = 93/1539 (6%)
Query: 3 QDLPDEVLANPELYGLRRSHRAAITHNTYAG-LDSDSDEEVIRPRRGKQKRKAVKQEHNY 61
+D+ EVL NPELYGLRRSHRAA Y D + DE+ I+ R K+ E +
Sbjct: 4 KDISTEVLQNPELYGLRRSHRAAAHQQNYFNDSDDEDDEDNIKQSRRKRMTTIEDDEDEF 63
Query: 62 DXXXXXXXXIDDFSDTDDFGSKRKPTRAPSAKRGRKRVSAGNSKSKRQAKRVEESDEENV 121
+ +D D +DF +P + K S SKSK + K E + V
Sbjct: 64 EDEEGEEDSGED-EDEEDFEEDDDYYGSPIKQNRSKPKSRTKSKSKSKPKSQSEK-QSTV 121
Query: 122 VLPTRFSSRNNNKVINYTLNDDSNDEDLMESSEEQDEGHNLDSEDMDLQDGYSASPSPQQ 181
+PTRFS+R N K +NY N D +D+DL+ES ++ L E++ + AS +PQ
Sbjct: 122 KIPTRFSNRQN-KTVNY--NIDYSDDDLLESEDDYGSEEALSEENV-----HEASANPQP 173
Query: 182 ET-HSIDIVVDHRLKEGVDNSGSTKNRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDL 240
E H IDIV++HRLK ++ + D+++ + N+EFLIKW D+SHLHN+WE+YE +
Sbjct: 174 EDFHGIDIVINHRLKTSLEEGKVLEKTVPDLNNCKENYEFLIKWTDESHLHNTWETYESI 233
Query: 241 KENGTKGLKRIENYYKQFIILDQEVRADPYTTREDIEVMDLEHERRIDEFEEFKVPERII 300
+ +GLKR++NY KQFII DQ+VR DPY T EDIE+MD+E ERR+DEFEEF VPERII
Sbjct: 234 GQ--VRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEIMDMERERRLDEFEEFHVPERII 291
Query: 301 DSERFENEDGSGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQ 360
DS+R EDG+ SQL+YLVKWRRLNYDE TWE A++IVK+APEQVK FQNR NSKI+PQ
Sbjct: 292 DSQRASLEDGT--SQLQYLVKWRRLNYDEATWENATDIVKLAPEQVKHFQNRENSKILPQ 349
Query: 361 NSSNYPANQRPKFEKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKT 420
SSNY +QRP+FEKL QP FIKGGELRDFQLTGINWMAFLWSK DNGILADEMGLGKT
Sbjct: 350 YSSNY-TSQRPRFEKLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKT 408
Query: 421 VQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQD 480
VQTV+FISWLI+ARRQNGPH++VVPLSTMPAW +TF+KWAP LNC+ YMGNQ SRD I++
Sbjct: 409 VQTVAFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIRE 468
Query: 481 YEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYES 540
YEFYTNP+AKGKK +KFNVLLTTYEYILKDR+ LGSIKWQF+AVDEAHRLKNAESSLYES
Sbjct: 469 YEFYTNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYES 528
Query: 541 LNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHK 600
LNSFKVANR+LITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE+QEEYI DLH+
Sbjct: 529 LNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEEQEEYIHDLHR 588
Query: 601 RLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSL 660
R+QPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALT+G KGGH SL
Sbjct: 589 RIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSL 648
Query: 661 LNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXX 720
LN+MNELKKASNHPYLFDNAEERVL KFGDG +REN+LRGLIMSSG
Sbjct: 649 LNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLK 708
Query: 721 XDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFL 780
DGHRVLIFSQMVR+LDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFN+ DSNDFVFL
Sbjct: 709 KDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFL 768
Query: 781 LSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEE 840
LSTRAGGLGINLMTADTV+IFDSDWNPQADLQAMARAHRIGQKNHVMVYR VSKDTVEEE
Sbjct: 769 LSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEE 828
Query: 841 VLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKL 900
VLERARKKMILEYAIISLGVTDGNK TKKNEP+AGELS ILKFGAGNMF DNQ+KL
Sbjct: 829 VLERARKKMILEYAIISLGVTDGNKY--TKKNEPNAGELSAILKFGAGNMFTATDNQKKL 886
Query: 901 EDLNLDEVLNHAEDHITTPELGESNLGGEEFLRQFEVTDYKADVDWDDIIPXXXXXXXXX 960
EDLNLD+VLNHAEDH+TTP+LGES+LGGEEFL+QFEVTDYKAD+DWDDIIP
Sbjct: 887 EDLNLDDVLNHAEDHVTTPDLGESHLGGEEFLKQFEVTDYKADIDWDDIIPEEELKKLQD 946
Query: 961 XXQRRIDEEYVREQLDIMNRKTAAIDKIKRSVNGE--TFGSDSEDEGNSK-SRKRSKANN 1017
Q+R DEEYV+EQL++MNR+ A+ KIK SVNG+ SDS+D+ S+ SR+R++AN+
Sbjct: 947 EEQKRKDEEYVKEQLEMMNRRDNALKKIKNSVNGDGTAANSDSDDDSTSRSSRRRARAND 1006
Query: 1018 LDAFGEREIRALYKCILRFGDIENKFEELIADGSLPVKSIDRYKELYHEMITEAETLMRD 1077
+D+ GE E+RALYK IL+FG+++ +ELIADG+LPVKS ++Y E Y EM+ A+ + +
Sbjct: 1007 MDSIGESEVRALYKAILKFGNLKEILDELIADGTLPVKSFEKYGETYDEMMEAAKDCVHE 1066
Query: 1078 EEAKRHEIFSKLEKDAAEYRQKIKNLEIKPEDDAGKETPITLLSAKRREKRAILFEFHDT 1137
EE R EI KLEK A YR K+K+ EIK E+ K+ P+T LS K+REK+A+LF F
Sbjct: 1067 EEKNRKEILEKLEKHATAYRAKLKSGEIKAENQP-KDNPLTRLSLKKREKKAVLFNFKGV 1125
Query: 1138 KALNADTLVNRRDNLKFLSNFVERNYKDDPLQFKFVNKNPKPVSAWNCVWGKEDDEKLLI 1197
K+LNA++L++R ++LK+L N + NYKDDPL+F N PKPV W+ W KE+DEKLLI
Sbjct: 1126 KSLNAESLLSRVEDLKYLKNLINSNYKDDPLKFSLGNNTPKPVQNWSSNWTKEEDEKLLI 1185
Query: 1198 GIYKYGYGAWMQIRDDPFLGLTEKLFLN---NEVTQKXXXXXXXXXXXXXXXXXXXXXXX 1254
G++KYGYG+W QIRDDPFLG+T+K+FLN N V +K
Sbjct: 1186 GVFKYGYGSWTQIRDDPFLGITDKIFLNEVHNPVAKKSASSSDT---------------- 1229
Query: 1255 XXXDAVKTETPDTTANTPIVTASSENTNKKTVKKAPGAVHLGRRVDYLFTVLRD--EAKG 1312
TP + +T SS KK PGA+HLGRRVDYL + LR K
Sbjct: 1230 ---------TPTPSKKGKGITGSS--------KKVPGAIHLGRRVDYLLSFLRGGLNTKS 1272
Query: 1313 PQTD---PSHPAXXXXXXXXXPQQNKRKPKKSATTAGNSNGNENAHTAGTPSDG----NS 1365
P D P P + + T++ +NG + P N+
Sbjct: 1273 PSADIGSKKLPTGPSKKRQRKPANHSKSMTPEITSSEPANGPPSKRMKALPKGPAALINN 1332
Query: 1366 VNLTGKDSTPDNSSETKRGKAHHHQQPSSRSGTPVVGSKKQQRKGKDIPLAPKADIRLPD 1425
L+ TP S+ R + +S P GS +
Sbjct: 1333 TRLSPNSPTPPLKSKVSRDNG------TRQSSNPSSGSAH-------------------E 1367
Query: 1426 KEYDSMDEEECKKTMTNVRSSLKRLRSGGDGLERKQWANLLKKELKRVGDYIESHKKDSS 1485
KEYDSMDEE+C+ TM+ +R+SLKRLR GG L+RK+WA +LK EL +G++IES K S
Sbjct: 1368 KEYDSMDEEDCRHTMSAIRTSLKRLRRGGKSLDRKEWAKILKTELTTIGNHIESQKGSSR 1427
Query: 1486 KTSPEKYKRHLWSFTAYYWPRDVPSSKLLAMYDKIKASE 1524
K SPEKY++HLWS++A +WP DV S+KL+AMYDKI S+
Sbjct: 1428 KASPEKYRKHLWSYSANFWPADVKSTKLMAMYDKITESQ 1466
>SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1388
Score = 1148 bits (2970), Expect = 0.0
Identities = 667/1513 (44%), Positives = 910/1513 (60%), Gaps = 182/1513 (12%)
Query: 12 NPELYGLRRSHRAAITHNTYAGLDSDSDEEVIRPRRGKQKRKAVKQEHNY-DXXXXXXXX 70
+PELYGLRRS R Y D D + R+G + + + D
Sbjct: 55 DPELYGLRRSGRTRSNPGRYVDTDDQEDVFPSKHRKGTRNGSSFSRHRTIRDLDDEAESV 114
Query: 71 IDDFSDTDDFGSKRKPTRAPSAKRGRKRVSAGNSKSKRQAKRVEESDEENVVLPTRFSSR 130
+ S++DD S G + KR ++ + ++ + RFSSR
Sbjct: 115 TSEESESDDS-------------------SYGGTPKKRSRQKKSNTYVQDEI---RFSSR 152
Query: 131 NNNKVINYTLNDDSNDEDLMESSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSIDIVV 190
N+ K +NY N++ ES EE++E E+M + S P+ +T +ID+V+
Sbjct: 153 NS-KGVNY------NEDAYFESFEEEEE------EEM-YEYATEVSEEPE-DTRAIDVVL 197
Query: 191 DHRLKEGVDNSGSTKNRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKR 250
DHRL EG D GST + ++EFLIKW + SHLH +WE Y ++ +G K+
Sbjct: 198 DHRLIEGHD--GSTPSE---------DYEFLIKWVNFSHLHCTWEPYNNISM--IRGSKK 244
Query: 251 IENYYKQFIILDQEVRADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDG 310
++N+ KQ I+LD+E+R DP TTREDIE MD+E ER+ + +EE+K +RI+ + N DG
Sbjct: 245 VDNHIKQVILLDREIREDPTTTREDIEAMDIEKERKRENYEEYKQVDRIV--AKHLNSDG 302
Query: 311 SGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQR 370
S ++YLVKW++L YD CTWE +S I +A +++ FQ R S + P +NY N R
Sbjct: 303 S----VEYLVKWKQLLYDFCTWEASSIIEPIAATEIQAFQEREESALSPSRGTNY-GNSR 357
Query: 371 PKFEKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWL 430
PK+ KL+ QPS+I GGELRDFQLTG+NWMA+LW KN+NGILADEMGLGKTVQTV+F+S+L
Sbjct: 358 PKYRKLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYL 417
Query: 431 IYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAK 490
++ RQ+GP LVVVPLST+PAWQET WA +NC+ Y+GN SR +I+DYEFY +
Sbjct: 418 AHSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVD---- 473
Query: 491 GKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRL 550
G + +KFN+LLTTYEY+LKDRS L +IKWQ++A+DEAHRLKN+ESSLYE+L+ FK +NRL
Sbjct: 474 GTQKIKFNLLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRL 533
Query: 551 LITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRL 610
LITGTPLQNNI+ELAALV+FLMPG+F I +EI+ E DE+QE YIR L + LQP+ILRRL
Sbjct: 534 LITGTPLQNNIRELAALVDFLMPGKFEIREEINLEAPDEEQEAYIRSLQEHLQPYILRRL 593
Query: 611 KKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGG-HVSLLNVMNELKK 669
KKDVEKSLPSK+ERILRVELSD+Q +YKNILT+NY LT I G +SLLN++ ELKK
Sbjct: 594 KKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIVVELKK 653
Query: 670 ASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIF 729
ASNHPYLFD EE + K + R+ +L+GLIM+SG DGHRVLIF
Sbjct: 654 ASNHPYLFDGVEESWMQKINSQGR-RDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRVLIF 712
Query: 730 SQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLG 789
SQMVR+LDILGDYLS++G QRLDGTVP+A RR SIDHFNA +S DFVFLLSTRAGGLG
Sbjct: 713 SQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLG 772
Query: 790 INLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKM 849
INLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYR +SKDT+EE+VLERAR+KM
Sbjct: 773 INLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKM 832
Query: 850 ILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLNLDEVL 909
ILEYAIISLGVTD K ++K ++ SA ELS ILKFGA NMFK +NQ+KLED+NLDE+L
Sbjct: 833 ILEYAIISLGVTDKQK--NSKNDKFSAEELSAILKFGASNMFKAENNQKKLEDMNLDEIL 890
Query: 910 NHAEDHITTPELGESNLGGEEFLRQFEVTDYKADVDWDDIIPXXXXXXXXXXXQRRIDEE 969
HAEDH T+ ++G +++GGEEFL+QFEVTDYKADV WDDIIP + R +EE
Sbjct: 891 EHAEDHDTSNDVGGASMGGEEFLKQFEVTDYKADVSWDDIIPLTEREKFEEEDRLREEEE 950
Query: 970 YVREQLDIMNRKTAAIDKIKRSVNGETFGSDSEDEGNSKSRKRSKANNLDAFGEREIRAL 1029
+++++++ +R+ R S S G S+ + + + + E+EIR L
Sbjct: 951 ALKQEIELSSRRG------NRPYPSSAVESPSY-SGTSERKSKKQMLKDEVLLEKEIRLL 1003
Query: 1030 YKCILRFGDIENKFEELIADGSLPVKSIDRYKELYHEMITEAETLMRDEEAKRHEIFSKL 1089
Y+ ++R+G +E+++ +++ L + K++ +++T + + S
Sbjct: 1004 YRAMIRYGSLEHRYNDIVKYADLTTQDAHVIKKIAADLVTAS-----------RKAVSAA 1052
Query: 1090 EKDAAEYRQKIKNLEIKPEDDAGKETPITLLSAKRREKRAILFEFHDTKALNADTLVNRR 1149
EKD + + S + ++A+L F K +NA+TLV R
Sbjct: 1053 EKDLSNDQ-----------------------SNNKSSRKALLITFKGVKNINAETLVQRL 1089
Query: 1150 DNLKFLSNFVERNYKDDPLQFKFVNKNPKPVSAWNCVWGKEDDEKLLIGIYKYGYGAWMQ 1209
++L L + + + + F+ + + + V W+C WG +D LL GI K+G+GAW++
Sbjct: 1090 NDLDILYDAMPTSGYSN---FQ-IPMHVRSVHGWSCQWGPREDSMLLSGICKHGFGAWLE 1145
Query: 1210 IRDDPFLGLTEKLFLNNEVTQKXXXXXXXXXXXXXXXXXXXXXXXXXXDAVKTETPDTTA 1269
IRDDP L + +K+FL +T T
Sbjct: 1146 IRDDPELKMKDKIFLE-------------------------------------DTKQTDN 1168
Query: 1270 NTPIVTASSENTNKKTVKKAPGAVHLGRRVDYLFTVLRDEAKGPQTDPSHPAXXXXXXXX 1329
+ P + NK+ KK P AVHL RR +YL + LR+ H
Sbjct: 1169 SVP-----KDKENKE--KKVPSAVHLVRRGEYLLSALREH---------HQNFGIKSSPA 1212
Query: 1330 XPQQNKRKPKKSATTAGNSNGNENAHTAGTPSDGNSVNLTGKDSTPDNSSETKRGKAHHH 1389
K +PKK N +G P+ ++ + TP + R K
Sbjct: 1213 ISTNGKTQPKKQTA---------NRRQSGKPNVKSAQKIESATRTPSPAISESRKK---- 1259
Query: 1390 QQPSSRSGTPVVGSKKQQRKGKDIPLAPKADIRLPDKEYDSMDEEECKKTMTNVRSSLKR 1449
PSS+ S++Q R P+ + D + ++ + CK+ M VR +KR
Sbjct: 1260 --PSSKDTKIETPSREQSRSQTASPVKSEKDD--GNVSLNAEQKARCKELMYPVRKHMKR 1315
Query: 1450 LRSGGDGLERKQWANLLKKELKRVGDYIESHKKDSSKTSPEKYKRHLWSFTAYYWPR-DV 1508
LR GL R + LL + L +G +IE D+ +++LW F Y+WP+ +V
Sbjct: 1316 LRKDSSGLGRAELVKLLTECLTTIGKHIEKTVNDTPSEEKATVRKNLWMFACYFWPKEEV 1375
Query: 1509 PSSKLLAMYDKIK 1521
+ L++MY+K+K
Sbjct: 1376 KYTSLISMYEKMK 1388
>SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1373
Score = 1017 bits (2630), Expect = 0.0
Identities = 593/1319 (44%), Positives = 798/1319 (59%), Gaps = 146/1319 (11%)
Query: 71 IDDFSDTDDFGSKRKPTRAPSAKRGRKRVSAGNSKSKRQAKR---VEESDEENVVLPTRF 127
IDD ++DD R +R +S++KR R E DE + +P +
Sbjct: 87 IDDAQNSDD-------VRVDGTRR--------SSRAKRPVYRDFSYTEIDEHEIPIPKKR 131
Query: 128 SSRNNNKVINYTLNDDSNDEDL-------------MESSEEQDEGHNLDSEDMDLQDGYS 174
S+ K +DD + D + +S +G +++ + + D +
Sbjct: 132 KSKPAPKQKKSVASDDEDAYDKRHRFSINSASGTEIRTSLRSSKGKSVNYNEQEFYDDFE 191
Query: 175 ASPSPQQETHS------IDIVVDHRLKEGVDNSGSTKNRRWDVDSIRANFEFLIKWADQS 228
+E ID V++HR + + D ++++++LIKW + S
Sbjct: 192 DEEEEVEEQVEEEYEPIIDFVLNHRKRADAQD-----------DDPKSSYQYLIKWQEVS 240
Query: 229 HLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTREDIEVMDLEHERRID 288
HLHN+WE Y L + +G K+++NY KQ II D+E+R DP TT EDIE +D+E ER+
Sbjct: 241 HLHNTWEDYSTL--SSVRGYKKVDNYIKQNIIYDREIREDPTTTFEDIEALDIERERKNM 298
Query: 289 EFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPEQVKE 348
FEE+K+ ERI+ SE NE+G + +Y VKWR+L YD CTWE A I MAP +V +
Sbjct: 299 LFEEYKIVERIVASET--NEEG----KTEYFVKWRQLPYDNCTWEDADVIYSMAPNEVYQ 352
Query: 349 FQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDN 408
F R NS +P Y N RP + KL+ QPS+IKGGE+RDFQLTGINWMA+LW +N+N
Sbjct: 353 FLQRENSPYLPYKGVFY--NTRPPYRKLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNEN 410
Query: 409 GILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYY 468
GILADEMGLGKTVQTV F+S+L+++ +Q+GP L+VVPLST+PAWQET W P LN + Y
Sbjct: 411 GILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVPLSTVPAWQETLANWTPDLNSICY 470
Query: 469 MGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAH 528
GN SR I++YEFY + ++ LKFN+LLTTYEYILKD+ L +I+WQ+LA+DEAH
Sbjct: 471 TGNTESRANIREYEFYLSTNSR---KLKFNILLTTYEYILKDKQELNNIRWQYLAIDEAH 527
Query: 529 RLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQD 588
RLKN+ESSLYE+L+ F+ ANRLLITGTPLQNN+KELA+LVNFLMPG+F I E++F+ +
Sbjct: 528 RLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASLVNFLMPGKFYIRDELNFDQPN 587
Query: 589 EQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSA 648
+QE IRDL +RLQPFILRRLKKDVEKSLPSK+ERILRVELSD+QTE+YKNILTKNY A
Sbjct: 588 AEQERDIRDLQERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRA 647
Query: 649 LTSGIKG-GHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHK-SRENILRGLIMSS 706
LT G G +SLLN++ ELKK SNHPYLF A E+ + G K +RE+ LRG+IM+S
Sbjct: 648 LTGHTDGRGQLSLLNIVVELKKVSNHPYLFPGAAEKWMM----GRKMTREDTLRGIIMNS 703
Query: 707 GXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISI 766
G DGHRVLIFSQMVR+L+ILG+Y+S++G N+QRLDGT+P++ RR+SI
Sbjct: 704 GKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSI 763
Query: 767 DHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHV 826
DHFNA DS DFVFLLSTRAGGLGINL TADTVIIFDSDWNPQADLQAMARAHRIGQKNHV
Sbjct: 764 DHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHV 823
Query: 827 MVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFG 886
VYRF+SKDTVEE++LERAR+KMILEYAIISLGVT+ +K ++K ++ A ELS ILKFG
Sbjct: 824 NVYRFLSKDTVEEDILERARRKMILEYAIISLGVTEKSK--NSKNDKYDAQELSAILKFG 881
Query: 887 AGNMFKPNDNQQKLEDLNLDEVLNHAEDHITTPELGESNLGGEEFLRQFEVTDYKA-DVD 945
A NMFK +NQ+KLE++NLD++L+HAED ++ ++G +++GGEEFL+QFEVTDYKA D++
Sbjct: 882 ASNMFKATENQKKLENMNLDDILSHAEDRDSSNDVGGASMGGEEFLKQFEVTDYKAEDLN 941
Query: 946 WDDIIPXXXXXXXXXXXQRRIDEEYVREQLDIMNRKTAAIDKIKRSVNGETFGSDSED-- 1003
WDDIIP + E + E+ ++ + A ++ +R E +
Sbjct: 942 WDDIIPEE-------------EMERIEEEERMLAAQRAKEEERERREEEERENDEDHPSR 988
Query: 1004 --EGNSKSRKRSKANNLDAFGEREIRALYKCILRFGDIENKFEELIADGSLPVKSIDRYK 1061
+ +KS + + + E+EIR LY+ +++FG ++ +F+ ++ + L R
Sbjct: 989 TYKRTTKSITKRQQRREEMVREKEIRLLYRAMIKFGLVDERFDTIVKEAELQATDPKRIY 1048
Query: 1062 ELYHEMITEAETLMRDEEAKRHEIFSKLEKDAAEYRQKIKNLEIKPEDDAGKETPITLLS 1121
L +M+ + E +L D + +Q
Sbjct: 1049 SLSADMVKACD-----------EAVERLGADDTKNKQ----------------------- 1074
Query: 1122 AKRREKRAILFEFHDTKALNADTLVNRRDNLKFLSNFVERNYKD-DPLQFKFVNKNPKPV 1180
++AIL EF K +NA+T+ R +L L R YK DPL+ + + + V
Sbjct: 1075 ----PRKAILIEFKGVKNINAETVTLRVKDLTHL----HRAYKGLDPLK-QIIGYPIRSV 1125
Query: 1181 SAWNCVWGKEDDEKLLIGIYKYGYGAWMQIRDDPFLGLTEKLFLNNEVTQKXXXXXXXXX 1240
+WNC WG ++D LL GI K+G+G W I++DP LGL +K+FL+ K
Sbjct: 1126 HSWNCSWGIKEDSMLLAGINKHGFGCWQAIKNDPDLGLHDKIFLDEAKNDKESRYVPSAV 1185
Query: 1241 XXXXXXXXXXXXXXXXXD--AVKTETP---------DTTANTPIVT--ASSENTNK--KT 1285
D VKT+ P T ++T T S NT K +T
Sbjct: 1186 HLVRRGEYLLSVVREHPDLFVVKTDQPTKRKYNRKAPTKSSTRQTTLDGSISNTKKSSRT 1245
Query: 1286 VKKAPGAVHLGRRVDYLFTVLRDEAKGPQTDPSHPAXXXXXXXXXPQQNKRKPKKSATT 1344
KK + G TV DE + P NKR + S T
Sbjct: 1246 KKKKEEETNRGDETSPEGTVGEDEVEEEPRQAEPPKRALRSNSGKAASNKRTTRNSMKT 1304
>Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1739
Score = 726 bits (1873), Expect = 0.0
Identities = 515/1578 (32%), Positives = 791/1578 (49%), Gaps = 185/1578 (11%)
Query: 13 PELYGLRRSHRAAITHNTY-----AGLDSDSDEEVIRPRRGKQKRKAVKQEHNYDXXXXX 67
P++YG+RRS+R+ + + A S+S R +R +K++ KQE + D
Sbjct: 104 PDVYGVRRSNRSRQEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKQEPSEDEQEQG 163
Query: 68 XXXIDDFSDTDDFGSKRKPTRAPSAKRGRKRVSAGNSKSKRQAKRVEESDEENVVLPTRF 127
+ + P R R +K+ K K+Q E+ D++ P R
Sbjct: 164 TSAESEPEQKKVKARRPVPRRTVPKPRVKKQPKTQRGKRKKQDSSDEDDDDDEA--PKRQ 221
Query: 128 SSRNNNKVINYTLNDD--SNDEDLMESSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHS 185
+ R K ++Y +DD ++ +DL+E + G +D + Q + +
Sbjct: 222 TRRRAAKNVSYKEDDDFETDSDDLIEMT-----GEGVDEQ--------------QDNSET 262
Query: 186 IDIVVDHRL-KEGVDNSGST---------KNRRWDVDSIRANFEFLIKWADQSHLHNSWE 235
I+ V+D RL K+G + +T + +D + ++LIKW S++H++WE
Sbjct: 263 IEKVLDSRLGKKGATGASTTVYAIEANGDPSGDFDTEKDEGEIQYLIKWKGWSYIHSTWE 322
Query: 236 SYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTREDIEVMDLEHERRIDEFEEFKV 295
S E L++ KGLK++EN+ K+ + Q + + ED+E + + E + +++++
Sbjct: 323 SEESLQQQKVKGLKKLENFKKKEDEIKQWLGK---VSPEDVEYFNCQQELASELNKQYQI 379
Query: 296 PERIIDSERFENEDG-----------SGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPE 344
ER+I + ++ G + S++ +YL KW L Y EC+WE + I K
Sbjct: 380 VERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLPYSECSWEDEALIGKKFQN 439
Query: 345 QVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGG--ELRDFQLTGINWMAFL 402
+ F +R NSK +P QRP+F L QP+++ G ELRD+QL G+NW+A
Sbjct: 440 CIDSFHSRNNSKTIPTRECK-ALKQRPRFVALKKQPAYLGGENLELRDYQLEGLNWLAHS 498
Query: 403 WSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPG 462
W KN++ ILADEMGLGKT+QT+SF+S+L + + GP L+VVPLST+ +WQ F+ WAP
Sbjct: 499 WCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPE 558
Query: 463 LNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFL 522
+N V Y+G+ SR+ I++YE+ + K LKFN L+TTYE +LKD++ LGSI W FL
Sbjct: 559 INVVVYIGDLMSRNTIREYEWIHSQT----KRLKFNALITTYEILLKDKTVLGSINWAFL 614
Query: 523 AVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEI 582
VDEAHRLKN +S LY++L FK +RLLITGTPLQN++KEL +L++F+MP +F ++
Sbjct: 615 GVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDF 674
Query: 583 DFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNIL 642
+ E+ + +E + LHK L+PF+LRR+KKDVEKSLP+K E+ILRVE+S +Q +YYK IL
Sbjct: 675 E-EDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWIL 733
Query: 643 TKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGL 702
T+NY AL G +G LN++ ELKK NH YL EE + ++ + IL L
Sbjct: 734 TRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE-------NERENGQEILLSL 786
Query: 703 IMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQR 762
I SSG G+RVLIFSQMVR+LDIL +YL+IK FQRLDG++ R
Sbjct: 787 IRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIR 846
Query: 763 RISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQ 822
+ ++DHFNA+ S DF FLLSTRAGGLGINL +ADTV+IFDSDWNPQ DLQA ARAHRIGQ
Sbjct: 847 KQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQ 906
Query: 823 KNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDG-----NKISSTKKNEPSAG 877
K V +YR V+K TVEEE++ERA+KKM+L++ +I T G N + N +
Sbjct: 907 KKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTILENNSGRSNSNPFNKE 966
Query: 878 ELSEILKFGAGNMFKPNDNQQ-KLEDLNLDEVLNHAEDHITTPELGESNLGGEEFLRQFE 936
EL+ ILKFGA ++FK + ++ + +++++DE+L AE T E S +E L QF+
Sbjct: 967 ELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAE----TRENEVSTSATDELLSQFK 1022
Query: 937 VTDY-----------KADVDWDDIIPXXXXXXXXXXX-QRRIDEEYVREQLDIMNRKTAA 984
V ++ + DWD+IIP Q+ ++E Y+ ++ +K
Sbjct: 1023 VANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQT 1082
Query: 985 ID---------KIKRSVNGETFGSDSEDEGNSKSRKRSKANNLD---AFGEREIRALYKC 1032
D + +RS E+ DS+D+ K R R ++ D F + EIR K
Sbjct: 1083 NDSDSDTESKRQAQRSSASESETEDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIKA 1142
Query: 1033 ILRFGDIENKFEELIADGSLPVKSIDRYKELYHEMITEAETLMRDEEAKRHEIFSKLEKD 1092
+FG + E L D L KS+ K L + + M+
Sbjct: 1143 YKKFGLPLERLECLARDAELVDKSVADLKRLGELIHNSCVSAMQ---------------- 1186
Query: 1093 AAEYRQKIKNLEIKPEDDAGKETPITLLSAKRREKRAILFEFHDTKALNADTLVNRRDNL 1152
EY +++K + + + P +S + ++I+ + + L+ V+ +
Sbjct: 1187 --EYEEQLKENASEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKK 1244
Query: 1153 KFLSNFVERNYKDDPLQFKFVNKNPKPVSAWNCVWGKEDDEKLLIGIYKYGYGAWMQIRD 1212
K+ + + ++ WG EDD +LL+GIY++GYG W I+
Sbjct: 1245 KYCLTCRVK------------------AAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKT 1286
Query: 1213 DPFLGLTEKLFLNNEVTQKXXXXXXXXXXXXXXXXXXXXXXXXXXDAVKTETPDTTANTP 1272
DP L LT+K+ L E +K D +
Sbjct: 1287 DPELKLTDKI-LPVETDKK----------------PQGKQLQTRADYLLKLLRKGLEKKG 1329
Query: 1273 IVTASSENTNKKTVKKAPGAVHLGRRVDYLFTVLRDEAKGPQTDPSHPAXXXXXXXXXPQ 1332
VT E KK + + R L++E + P H
Sbjct: 1330 AVTGGEEAKLKKRKPRVKKENKVPR--------LKEEHGIELSSPRHSDNPSEEGEVKDD 1381
Query: 1333 QNKRKP-KKSATTAGNSNGNENAHTAGTPSDGNSVNLTGKDSTPDNSSETKRGKAHHHQQ 1391
++ P KK N E ++ +G+ KD ++
Sbjct: 1382 GLEKSPMKKKQKKKENKENKEKQMSSRKDKEGDKERKKSKDK---------------KEK 1426
Query: 1392 PSSRSGTPVVGSKKQQRKGKDIPLAPKADIRLPDKEYDSMDEEE---CKKTMTNVRSSLK 1448
P S G SK ++ +G A + + + E D +D+E CK+ M V+ +LK
Sbjct: 1427 PKS--GDAKSSSKSKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALK 1484
Query: 1449 RLRSGGDGLERKQWANLLKKELKRVGDYI-ESHKKDSSKTSPEKYKRHLWSFTAYYWPRD 1507
+L GL ++ + L ++GD I E K S + + ++R+LW F + + D
Sbjct: 1485 QLDKPDKGLNVQEQLEHTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTEFD 1544
Query: 1508 VPS-SKLLAMYDKIKASE 1524
KL M K ++ E
Sbjct: 1545 ARKLHKLYKMAHKKRSQE 1562
>Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1709
Score = 687 bits (1772), Expect = 0.0
Identities = 458/1247 (36%), Positives = 671/1247 (53%), Gaps = 174/1247 (13%)
Query: 32 AGLDSDSDEEVIRPRRGKQKRKAVKQEHNYDXXXXXXXXIDDFSDTDDFGSKRKPTRAPS 91
+G DS+S+EE ++K + E +Y+ RKP
Sbjct: 160 SGSDSESEEE-------REKSSCDETESDYEPKNKV--------------KSRKPQNRSK 198
Query: 92 AKRGRKRVSAGNSKSKRQAKRVEESDEENVVLPTRFSSRNNNKV-INYTLNDD--SNDED 148
+K G+K + + KRQ EE D+E + SSR V ++Y +++ ++ +D
Sbjct: 199 SKNGKKILG----QKKRQIDSSEEDDDEEDYDNDKRSSRRQATVNVSYKEDEEMKTDSDD 254
Query: 149 LMESSEE-----QDEGHNLDSEDMDLQDGYSASPSPQQETHSIDIVVDHRLKEGVDNSGS 203
L+E E ++E MD + G + ++++ +G N+G
Sbjct: 255 LLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEA-------DGDPNAGF 307
Query: 204 TKNRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQ 263
KN+ ++LIKW SH+HN+WE+ E LK+ +G+K+++NY K+ DQ
Sbjct: 308 EKNKE------PGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKK----DQ 357
Query: 264 EVR-----ADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKY 318
E + A P ED+E + + E D +++++ RII + S + Y
Sbjct: 358 ETKRWLKNASP----EDVEYYNCQQELTDDLHKQYQIVGRIIA----HSNQKSAAGYPDY 409
Query: 319 LVKWRRLNYDECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDA 378
KW+ L Y EC+WE + I K + E+ +R SK P QRP+F L
Sbjct: 410 YCKWQGLPYSECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKV-LKQRPRFVALKK 468
Query: 379 QPSFI---KGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARR 435
QPS+I +G ELRD+QL G+NW+A W K ++ ILADEMGLGKT+QT+SF+++L + +
Sbjct: 469 QPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQ 528
Query: 436 QNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHL 495
GP L+VVPLST+ +WQ WA +N V Y+G+ SR++I+ +E +T+ Q K L
Sbjct: 529 LYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE-WTHHQTK---RL 584
Query: 496 KFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGT 555
KFN+LLTTYE +LKD++ LG + W F+ VDEAHRLKN +S LY++L FK +RLLITGT
Sbjct: 585 KFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT 644
Query: 556 PLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEY-IRDLHKRLQPFILRRLKKDV 614
PLQN++KEL +L++F+MP +F+ + DFE + + EY LHK L+PF+LRR+KKDV
Sbjct: 645 PLQNSLKELWSLLHFIMPEKFSSWE--DFEEEHGKGREYGYASLHKELEPFLLRRVKKDV 702
Query: 615 EKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHP 674
EKSLP+K E+ILR+E+S +Q +YYK ILT+NY AL+ G KG LN+M ELKK NH
Sbjct: 703 EKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHC 762
Query: 675 YLF---DNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQ 731
YL DN E +++ L+ LI SSG G+RVLIFSQ
Sbjct: 763 YLIKPPDNNE----------FYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQ 812
Query: 732 MVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGIN 791
MVR+LDIL +YL + FQRLDG++ R+ ++DHFNAE S DF FLLSTRAGGLGIN
Sbjct: 813 MVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGIN 872
Query: 792 LMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMIL 851
L +ADTV+IFDSDWNPQ DLQA ARAHRIGQK V +YR V+K +VEE++LERA+KKM+L
Sbjct: 873 LASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVL 932
Query: 852 EYAIISLGVTDGNKISSTKKNEPSAG-----ELSEILKFGAGNMFK-PNDNQQKLEDLNL 905
++ +I T G + T S+ ELS ILKFGA +FK P +Q+ +++++
Sbjct: 933 DHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDI 992
Query: 906 DEVLNHAEDHITTPELGESNLGGEEFLRQFEVTDY-------------KADVDWDDIIPX 952
DE+L AE H P G +G +E L QF+V ++ + +W++IIP
Sbjct: 993 DEILKRAETHENEP--GPLTVG-DELLSQFKVANFSNMDEDDIELEPERNSKNWEEIIPE 1049
Query: 953 XXXXXXXXXXQRRIDEEYVREQLD---IMNRKTAAIDKI-------KRSVNGETFGSDSE 1002
+RR++EE +++L+ ++ R +I +RS + GSDS+
Sbjct: 1050 DQ--------RRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSD 1101
Query: 1003 DEGNSKSRKRS------KANNLDAFGEREIRALYKCILRFGDIENKFEELIADGSLPVKS 1056
K K+ N+ F + EIR K +FG P++
Sbjct: 1102 SISEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGG--------------PLER 1147
Query: 1057 IDRYKELYHEMITEAETLMRDEEAKRHEIFSKLEKDAAEYRQKIKNLEIKPEDDAGKETP 1116
+D A+ E+ K E D + + N IK D+ T
Sbjct: 1148 LDAI-------------------ARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTE 1188
Query: 1117 ITLLSAKRREKRAILFEFHDTKALNADTLVNRRDNLKFLSNFVERNYKDDPLQFK-FVNK 1175
T + + + F + +NA +++ + L L ++ DP + K +
Sbjct: 1189 RT--GGRLGKVKGPTFRISGVQ-VNAKLVISHEEELIPL----HKSIPSDPEERKQYTIP 1241
Query: 1176 NPKPVSAWNCVWGKEDDEKLLIGIYKYGYGAWMQIRDDPFLGLTEKL 1222
+ ++ WGKEDD LLIGIY+YGYG+W I+ DP L LT K+
Sbjct: 1242 CHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTHKI 1288
>CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1465
Score = 686 bits (1771), Expect = 0.0
Identities = 450/1240 (36%), Positives = 667/1240 (53%), Gaps = 162/1240 (13%)
Query: 28 HNTYAGLDSDSDEEVIRPRRGKQKRKAVKQEHNYDXXXXXXXXIDDFSDTDDFGSKRKPT 87
+N G+D+++ + + ++ +++ +Q+ + + S DD+ +RKP
Sbjct: 79 NNNNRGMDAETRKLLENENYFRRSKRSKRQDDSPSDNSE-----ESQSSEDDWDDRRKPR 133
Query: 88 RAPSAKRGRKRVSAGNSKSKRQAKRVEESDEENVVLPTRFSSRNNNKVINYTLNDDSNDE 147
R + K+V + ++ V + R S + N +DD +D+
Sbjct: 134 RTVT-------------------KKVVKQTKKAVSVVKRKSVKGNVNYAEKNSDDDIDDD 174
Query: 148 DLMESSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSIDIVVDHRLKEGVDNSGSTKNR 207
D++E EE + P T +++ V+ R GV + +
Sbjct: 175 DVLEWDEEPAV----------------PAEGPAILTETVERVIKWR--HGVPGATGSATT 216
Query: 208 RWDV-------DSI---RANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQ 257
+++ D I + +F +KW SHLHN+WES L KGLK+++NY K+
Sbjct: 217 CYNIADKGDPNDQIPGDKTEQQFFVKWTGWSHLHNTWESENSLALMNAKGLKKVQNYVKK 276
Query: 258 FIILDQEVRADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLK 317
++ R+ +E IE + E + + EE+K ER++ + + GS +
Sbjct: 277 QKEVEMWKRS---ADKEYIEFFECEQQMAEELCEEYKKVERVVAHQTSRDRAADGSMATE 333
Query: 318 YLVKWRRLNYDECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLD 377
YL+KW L Y +CTWE + APEQ+K + +R + P +SN +RPKFEK +
Sbjct: 334 YLIKWSGLPYSDCTWEDEKMV---APEQIKAYYHRIENLKSPNKNSNV-LRKRPKFEKFE 389
Query: 378 AQPSFIK-GGE----LRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIY 432
+ P F+K GE LRD+QL G+NWM + W K ++ ILADEMGLGKT+Q++S ++ L +
Sbjct: 390 SMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFH 449
Query: 433 ARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGK 492
GP+LVVVPLSTM AWQ+ F +WAP +N V YMG+ SRD+I+ YE++ G
Sbjct: 450 RYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEWFVG----GT 505
Query: 493 KHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLI 552
K +K N +LTTYE +LKD++ L SI W L VDEAHRLKN ES LY+SL F+ ++LLI
Sbjct: 506 KKMKINAILTTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLI 565
Query: 553 TGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKK 612
TGTPLQN++KEL AL++F+MP +F +E + + +E + I LHK+L+PF+LRR+KK
Sbjct: 566 TGTPLQNSLKELWALLHFIMPEKFDCWEEFETAH-NESNHKGISALHKKLEPFLLRRVKK 624
Query: 613 DVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASN 672
DVEKSLP KTE+ILRV+++ Q ++YK ILTKNY L+ G+KG +N++ ELKK N
Sbjct: 625 DVEKSLPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELKKCCN 684
Query: 673 HP-------YLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHR 725
H +++D+A+ R L+ L+ SSG GHR
Sbjct: 685 HASLTRQYDHIYDDAQGR---------------LQQLLKSSGKLILLDKLLCRLKDKGHR 729
Query: 726 VLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRA 785
VLIFSQMV +LDIL +YL ++ QRLDG++ + R+ ++DH+NA S DF FLLSTRA
Sbjct: 730 VLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLSTRA 789
Query: 786 GGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERA 845
GGLGINL TADTVIIFDSDWNPQ DLQAM+RAHRIGQ V +YR V+K +VEEE++ERA
Sbjct: 790 GGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERA 849
Query: 846 RKKMILEYAIISLGVTDGNKISSTKKNEPSAG-------ELSEILKFGAGNMFKPNDNQQ 898
++K++L++ +I T G + S KN ++G ELS ILKFGA +FK + ++
Sbjct: 850 KRKLVLDHLVIQRMDTTGKTVLS--KNATASGSVPFDKQELSAILKFGAVELFKEKEGEE 907
Query: 899 KLEDLNLDEVLNHAEDHITTPELGESNLGGEEFLRQFEVTDYKADV---------DWDDI 949
+ ++++D +L AE T E E + E L F+ ++ D +W I
Sbjct: 908 QEPEVDIDRILMGAE----TREAEEEVMKENELLSSFKYANFAIDEEKDIAAATDEWAAI 963
Query: 950 IPXXXXXXXXXXXQRRIDEEYVREQLDIMNRKTAAIDKIKRSVNGETFGSDSEDEGNSKS 1009
IP + RI EE ++L MN + V + G D E+E ++
Sbjct: 964 IP--------EEDRNRILEEERMKELAEMNLAPRQRKQPIPQVVEDDDGDDDEEEDDTGK 1015
Query: 1010 RKRSKANNLDAFGEREIRALYKCILRFGDIENKFEELIADGSLPVKSIDRYKELYHEMIT 1069
+K+ KA + F EI+ K +F N+ EE+ D L S D K+L E ++
Sbjct: 1016 KKKKKA--VGNFTIPEIKRFIKSFRKFSMPLNRLEEIAQDAELEEHSTDEMKKLV-ESLS 1072
Query: 1070 EAETLMRDEEAKRHEIFSKLEKDAAEYRQKIKNLEIKPEDDAGKETPITLLSAKRREKRA 1129
EA +K A E+ KN DAG A EK+
Sbjct: 1073 EA-----------------CKKAADEFDSNEKN------GDAG---------AAESEKKD 1100
Query: 1130 I--LFEFHDTKALNADTLVNRRDNLKFLSNFVERNYKDDPLQFKFVNKNPKPVSAWNCVW 1187
I F+FH T +N + LK L ++ ++ FK N K W+ W
Sbjct: 1101 IERKFKFH-TCDVNLKQIERSHAELKPLHEILKS--EETKTSFK-PPANAKLQKGWDVDW 1156
Query: 1188 GKEDDEKLLIGIYKYGYGAWMQIRDDPFLGLTEKLFLNNE 1227
+ DD LL+G++KYGYG+W I+ DP LGL +K+F+ ++
Sbjct: 1157 SRPDDSALLLGVWKYGYGSWEAIKMDPTLGLADKIFIKDK 1196
>7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1883
Score = 672 bits (1734), Expect = 0.0
Identities = 481/1424 (33%), Positives = 713/1424 (49%), Gaps = 181/1424 (12%)
Query: 21 SHRAAITHNTYAGLDSDSDEEVIRPRRGKQKRK----AVKQEH----NYDXXXXXXXXID 72
S +A T + S+ +EE RP+R +Q RK A K + D
Sbjct: 158 SDSSANVSPTSSSSSSEEEEEDYRPKRTRQARKPPTAAEKSKKAPAPKNKKKTWDSDESD 217
Query: 73 DFSDTDDFGSKRKPTRAPSAKRGRKRVSAGNSKSKRQAKRVEESDEENVVLPTRFSSRNN 132
+ D+DD S + R P+A R +++ + + + E+SD+++ R ++R
Sbjct: 218 ESEDSDDEVSTAQK-RKPAATTSRSKLAQQQQRRRVKPFSSEDSDDDDA--SKRCATRRK 274
Query: 133 NKVINY--TLNDDSND-EDLMESSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSIDIV 189
++Y D++ D EDL+E ++ + +A+ +++ +I+ +
Sbjct: 275 GAAVSYKEASEDEATDSEDLLEFEYDESQAATT-----------AATAEEEEKCETIERI 323
Query: 190 VDHRL-KEG----------VDNSGSTKNRRWD---VDSIRANFEFLIKWADQSHLHNSWE 235
+ R K G ++ +G + +D +FLIKW S++HN+WE
Sbjct: 324 LAQRAGKRGCTGNQTTIYAIEENGFDPHAGFDEKQTPDAETEAQFLIKWKGWSYIHNTWE 383
Query: 236 SYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTREDIEVMDLEHERRIDEFEEFKV 295
S L++ KG+K+++N+ K+ ++ Y EDI+ + + E + + + +
Sbjct: 384 SEATLRDMKAKGMKKLDNFIKKE---KEQAYWRRYAGPEDIDYFECQLELQHELLKSYNN 440
Query: 296 PERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPEQVKEFQNRTNS 355
+RII ++ + +DG+ +YL KW+ L Y E TWE A+ +++ ++F +R +S
Sbjct: 441 VDRII-AKGSKPDDGTE----EYLCKWQSLPYAESTWEDAALVLRKWQRCAEQFNDRESS 495
Query: 356 KIMPQNSSNYPANQRPKFEKLDAQPSFIKGG-ELRDFQLTGINWMAFLWSKNDNGILADE 414
K P RPKF ++ QP F+ G LRD+Q+ G+NW+ W K ++ ILADE
Sbjct: 496 KCTPSRHCRV-IKYRPKFSRIKNQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADE 554
Query: 415 MGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQAS 474
MGLGKT+QT+ F+ L GP L VVPLSTM AWQ FD WAP +N V Y+G+ S
Sbjct: 555 MGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKS 614
Query: 475 RDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAE 534
R+LIQ YE+ Q + K LKFN +LTTYE +LKD+ LG+++W L VDEAHRLKN +
Sbjct: 615 RELIQQYEW----QFESSKRLKFNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDD 670
Query: 535 SSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEY 594
S LY+SL F +RLLITGTPLQN++KEL AL++F+MP +F + + ++ + + + Y
Sbjct: 671 SLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMPDKFDTWENFEVQHGNAEDKGY 730
Query: 595 IRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIK 654
R LH++L+P+ILRR+KKDVEKSLP+K E+ILRVE++ +Q +YYK ILTKN+ AL G +
Sbjct: 731 TR-LHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKR 789
Query: 655 GGHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXX 714
G + LN++ ELKK NH L +E ++ ++ L+ L+ SG
Sbjct: 790 GSTSTFLNIVIELKKCCNHAALIRPSEFELMGL------QQDEALQTLLKGSGKLVLLDK 843
Query: 715 XXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDS 774
GHRVLIFSQMVR+LD+L DYL + FQRLDG++ RR ++DHFNAE S
Sbjct: 844 LLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGS 903
Query: 775 NDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSK 834
DF FLLSTRAGGLGINL TADTVIIFDSDWNPQ DLQA ARAHRIGQKN V +YR V+
Sbjct: 904 QDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTA 963
Query: 835 DTVEEEVLERARKKMILEYAIISLGVTDGNKI-------SSTKKNEPSAGELSEILKFGA 887
+VEE+++ERA++KM+L++ +I T G + S+ N + +LS ILKFGA
Sbjct: 964 RSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGA 1023
Query: 888 GNMFKPNDNQQKLEDL--NLDEVLNHAEDHITTPELGESNLGGEEFLRQFEVTDYKA--- 942
+FK D Q+ +DL ++DE+L AE PE+ +L L F+V A
Sbjct: 1024 EELFK--DEQEHDDDLVCDIDEILRRAETRNEDPEMPADDL-----LSAFKVASIAAFEE 1076
Query: 943 -------------------DVDWDDIIPXXXXXXXXXXXQRRIDEEYVREQLDIM---NR 980
DWDDIIP D+E +E D+ R
Sbjct: 1077 EPSDSVSKQDQNAAGEEDDSKDWDDIIPEGFRKAID-------DQERAKEMEDLYLPPRR 1129
Query: 981 KTAAIDKIKRSVNGE-----------------TFGSD-SEDEGNSKSRKR-SKANNLDAF 1021
KTAA + G+ GSD S D+G + R R + + F
Sbjct: 1130 KTAANQNEGKRGAGKGGKGKQQADDSGGDSDYELGSDGSGDDGRPRKRGRPTMKEKITGF 1189
Query: 1022 GEREIRALYKCILRFGDIENKFEELIADGSL---PVKSIDRYKELYHEMITEAETLMRDE 1078
+ E+R + +F ++ E + D L P+ + R E+ H+ + ++E
Sbjct: 1190 TDAELRRFIRSYKKFPAPLHRMEAIACDAELQEKPLAELKRLGEMLHDRCVQFLHEHKEE 1249
Query: 1079 EAKRHEIFSKLEKDAAEYRQKIKNLEIKPEDDAGKETPITLLSAKRREKRAILFEFHDTK 1138
E+K A ETP AK+R RA
Sbjct: 1250 ESKTA---------------------------ATDETP----GAKQRRARATFSVKLGGV 1278
Query: 1139 ALNADTLVNRRDNLKFLSNFVERNYKDDPLQFKFVNKNPKPVSAWNCVWGKEDDEKLLIG 1198
+ NA L+ L+ L N + + ++ Q+ F K PV ++ WG E+D KLL G
Sbjct: 1279 SFNAKKLLACEQELQPL-NEIMPSMPEERQQWSFNIKTRAPV--FDVDWGIEEDTKLLCG 1335
Query: 1199 IYKYGYGAWMQIRDDPFLGLTEKLFLNNEVTQKXXXXXXXXXXXXXXXXXXXXXXXXXXD 1258
IY+YG G+W Q++ DP L LT+K+ LN+ T+K
Sbjct: 1336 IYQYGIGSWEQMKLDPTLKLTDKILLND--TRKPQAKQLQTRAEYLLKIIKKNVELTKGG 1393
Query: 1259 AVKTETPDTTANTPIVTASSENTNKKTVKKAPGAVHLG--RRVDYLFTVLRDEAKGPQTD 1316
+ P + AS ++ K G G R V E+ Q D
Sbjct: 1394 QRRQRRPRASRANDAKAASQSASSTIDAKPHDGEDAAGDARTV--------AESSNSQVD 1445
Query: 1317 PSHPAXXXXXXXXXPQQNKRKPKKS-----ATTAGNSNGNENAH 1355
PS + +K KKS T+A ++NGN+ H
Sbjct: 1446 PSTASPHNAPATEQHGDPAKKAKKSKARSKKTSASDNNGNKPMH 1489
>At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1738
Score = 607 bits (1565), Expect = e-173
Identities = 375/897 (41%), Positives = 528/897 (58%), Gaps = 77/897 (8%)
Query: 73 DFSD-TDDFGSKRKPTRAPSAKRGRKRVSAG--------NSKSKRQAKRVEESDEENVV- 122
D SD DD+G+K+ R S +G ++ SAG +S+ KR+ ++ EE+
Sbjct: 290 DLSDYEDDYGTKKPKVRQQS--KGFRKSSAGLERKSFHVSSRQKRKTSYQDDDSEEDSEN 347
Query: 123 --------LPTRFSS-RNNNKVINYTLNDDSNDEDLMESSEEQDEGHNLDSEDMDLQDGY 173
L R ++ R NN T+ S S + + DSED+D DG
Sbjct: 348 DNDEGFRSLARRGTTLRQNNGRSTNTIGQSSEVRSSTRSVRKVSYVESEDSEDID--DGK 405
Query: 174 SASPSP----QQETHSIDIVVDHRLKEGVDNSGSTKNRR---------WDVDSIRANFEF 220
+ +++ I+ V+ H+LK G+ T N+ +D + EF
Sbjct: 406 NRKNQKDDIEEEDADVIEKVLWHQLK-GMGEDVQTNNKSTVPVLVSQLFDTEPDWNEMEF 464
Query: 221 LIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTREDIEVMD 280
LIKW QSHLH W++ DL+ G K++ NY K+ + +E+R +RE+IEV D
Sbjct: 465 LIKWKGQSHLHCQWKTLSDLQN--LSGFKKVLNYTKK---VTEEIRYRTALSREEIEVND 519
Query: 281 LEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTWE----VAS 336
+ E +D ++ ERII ++R ++DG G +YLVKW+ L+Y E TWE +A
Sbjct: 520 VSKEMDLDIIKQNSQVERII-ADRI-SKDGLGDVVPEYLVKWQGLSYAEATWEKDVDIAF 577
Query: 337 EIVKMAPEQVKEFQNRTNSKIMPQ------------NSSNYPANQRPKFEKLDAQPSFIK 384
V + + +E K++ Q N+ + KLD QP ++
Sbjct: 578 AQVAIDEYKAREVSIAVQGKMVEQQRTKGKGENSFSNAELWLLFSVASLRKLDEQPEWLI 637
Query: 385 GGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVV 444
GG LRD+QL G+N++ W + N ILADEMGLGKTVQ+VS + +L ++ GP LVVV
Sbjct: 638 GGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVV 697
Query: 445 PLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTY 504
PLST+ W + F KW PG+N + Y+G +ASR++ TN K + +KFN LLTTY
Sbjct: 698 PLSTLANWAKEFRKWLPGMNIIVYVGTRASREVRNK----TNDVHKVGRPIKFNALLTTY 753
Query: 505 EYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKEL 564
E +LKD++ L IKW +L VDEAHRLKN+E+ LY +L F N+LLITGTPLQN+++EL
Sbjct: 754 EVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEEL 813
Query: 565 AALVNFLMPGRFTIDQEI--DFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKT 622
AL++FL PG+F E +++N E + +LH L+P ILRR+ KDVEKSLP K
Sbjct: 814 WALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLHLELRPHILRRVIKDVEKSLPPKI 873
Query: 623 ERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEE 682
ERILRVE+S +Q +YYK IL +N+ L G++G VSLLN++ ELKK NHP+LF++A+
Sbjct: 874 ERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADH 933
Query: 683 RVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDY 742
D K L +I+SSG HRVLIFSQMVR+LDIL +Y
Sbjct: 934 GYGGDINDNSK-----LDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEY 988
Query: 743 LSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFD 802
LS++G FQRLDG+ + R+ ++DHFNA S+DF FLLSTRAGGLGINL TADTV+IFD
Sbjct: 989 LSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFD 1048
Query: 803 SDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTD 862
SDWNPQ DLQAM+RAHRIGQ+ V +YRFV+ +VEEE+LERA++KM+L++ +I +
Sbjct: 1049 SDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAE 1108
Query: 863 G--NKISSTKKNEPSAGELSEILKFGAGNMFKPNDN----QQKLEDLNLDEVLNHAE 913
G K + K + ELS IL+FGA +FK + N +++L +++DE+L AE
Sbjct: 1109 GRLEKRETKKGSNFDKNELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAE 1165
Score = 53.9 bits (128), Expect = 2e-06
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 1140 LNADTLVNRRDNLKFLSNFVERNYKDDPLQFKFVNKNPKPVSAWNCVWGKEDDEKLLIGI 1199
+ A+ L+ R L+ LS + R Y D QF+ ++ + C W + DD +LL+GI
Sbjct: 1356 VKANELLKRVQGLQLLSKRISR-YNDPISQFRVLSYLKPSNWSKGCGWNQIDDARLLLGI 1414
Query: 1200 YKYGYGAWMQIRDDPFLGLTEKL 1222
+G+G W +IR D LGLT+K+
Sbjct: 1415 LYHGFGNWEKIRLDESLGLTKKI 1437
>Hs4557451 [R] KOG0383 Predicted helicase
Length = 1944
Score = 492 bits (1267), Expect = e-138
Identities = 311/769 (40%), Positives = 425/769 (54%), Gaps = 65/769 (8%)
Query: 215 RANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTRE 274
R+ EF +KW S+ H SW L+ L NY ++ +D+ D Y + E
Sbjct: 545 RSEREFFVKWVGLSYWHCSWAKELQLE---IFHLVMYRNYQRKND-MDEPPPLD-YGSGE 599
Query: 275 DI------EVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYD 328
D +V D + +++ F + + R N YLVKWR L YD
Sbjct: 600 DDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYD 659
Query: 329 ECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFE-------------- 374
+ TWE E+ E+ K+ R IM ++ + ++ K E
Sbjct: 660 QSTWE-EDEMNIPEYEEHKQSYWRHRELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDP 718
Query: 375 --KLDAQPSFIK--GGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWL 430
K + QP FI GG L +QL G+NW+ F W++ + ILADEMGLGKT+QT+ F+ L
Sbjct: 719 TVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSL 778
Query: 431 IYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQA- 489
GP LV PLST+ W+ F WAP V Y G++ SR +I++ EF A
Sbjct: 779 YKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAI 838
Query: 490 ---------KGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYES 540
K + +KF+VLLT+YE I D++ LGSI+W L VDEAHRLKN +S +
Sbjct: 839 KGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRV 898
Query: 541 LNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHK 600
LN +K+ ++LL+TGTPLQNN++EL L+NFL P RF + E D +E+ I+ LH
Sbjct: 899 LNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHD 958
Query: 601 RLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSL 660
L P +LRRLK DV K++P+KTE I+RVELS +Q +YYK ILT+N+ AL S G VSL
Sbjct: 959 LLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSL 1018
Query: 661 LNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRG--LIMSSGXXXXXXXXXXX 718
LN+M +LKK NHPYLF A + K G LI SSG
Sbjct: 1019 LNIMMDLKKCCNHPYLFPVAAM-------ESPKLPSGAYEGGALIKSSGKLMLLQKMLRK 1071
Query: 719 XXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFV 778
GHRVLIFSQM ++LD+L D+L +G ++R+DG + A R+ +ID FNA + F
Sbjct: 1072 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1131
Query: 779 FLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVE 838
FLLSTRAGGLGINL TADTVIIFDSDWNP D+QA +RAHRIGQ N VM+YRFV++ +VE
Sbjct: 1132 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1191
Query: 839 EEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFK-PNDNQ 897
E + + A++KM+L + ++ G+ G+K S K EL +ILKFG +FK N+ +
Sbjct: 1192 ERITQVAKRKMMLTHLVVRPGL--GSKAGSMSKQ-----ELDDILKFGTEELFKDENEGE 1244
Query: 898 QKLEDLNLDEVLNHA------EDHITTPELGESNLGGEEFLRQFEVTDY 940
K ED ++ N A + T + N+ E+L F+V Y
Sbjct: 1245 NKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNM--NEYLSSFKVAQY 1291
>At2g25170 [R] KOG0383 Predicted helicase
Length = 1359
Score = 486 bits (1251), Expect = e-136
Identities = 336/989 (33%), Positives = 502/989 (49%), Gaps = 177/989 (17%)
Query: 308 EDGSGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPA 367
EDG +L+YLVK++ L+YDEC WE S+I E ++ F++ NS+ ++
Sbjct: 190 EDG----ELEYLVKYKELSYDECYWESESDISTFQNE-IQRFKD-VNSRTRRSKDVDHKR 243
Query: 368 NQRPKFEKLDAQPSFIKG----------GELRDFQLTGINWMAFLWSKNDNGILADEMGL 417
N R F++ D P F+K G L +QL G+N++ F WSK + ILADEMGL
Sbjct: 244 NPRD-FQQFDHTPEFLKDVMIYLFPAIEGLLHPYQLEGLNFLRFSWSKQTHVILADEMGL 302
Query: 418 GKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDL 477
GKT+Q+++ ++ L PHLV+ PLST+ W+ F WAP +N V Y G +R +
Sbjct: 303 GKTIQSIALLASLF--EENLIPHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAV 360
Query: 478 IQDYEFYTNPQAKG--------------KKHLKFNVLLTTYEYILKDRSTLGSIKWQFLA 523
I+++EFY + K +K +KF+VLLT+YE I D + L IKW+ +
Sbjct: 361 IREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMI 420
Query: 524 VDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEID 583
VDE HRLKN +S L+ SL + +R+L+TGTPLQNN+ EL L++FL G+F +E
Sbjct: 421 VDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ 480
Query: 584 FENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILT 643
E +D QEE I LHK L P +LRR+KKDV K +P K E ILRV+LS +Q EYYK I T
Sbjct: 481 EEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFT 540
Query: 644 KNYSALTSGIKGG-HVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGL 702
+NY LT KGG +SL N+M EL+K HPY+ + E + H + E + L
Sbjct: 541 RNYQVLTK--KGGAQISLNNIMMELRKVCCHPYMLEGVEPVI-------HDANE-AFKQL 590
Query: 703 IMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQR 762
+ S G GHRVLI++Q +LD+L DY + K ++R+DG V A+R
Sbjct: 591 LESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAER 650
Query: 763 RISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQ 822
+I ID FNA++SN F FLLSTRAGGLGINL TADTVII+DSDWNP ADLQAMARAHR+GQ
Sbjct: 651 QIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQ 710
Query: 823 KNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEI 882
N VM+YR +++ T+EE +++ +KKM+LE+ ++ K+ + N+ EL +I
Sbjct: 711 TNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVV-------GKLKTQNINQE---ELDDI 760
Query: 883 LKFGAGNMFKPNDNQQ------KLEDLNLDEVLNHAEDHITTPELGESNLGGEEFLRQFE 936
+++G+ +F D++ +D +D++L+ D + E+ + FL+ F+
Sbjct: 761 IRYGSKELFASEDDEAGKSGKIHYDDAAIDKLLD--RDLVEAEEVSVDDEEENGFLKAFK 818
Query: 937 VTDYKADVDWDDIIPXXXXXXXXXXXQRRIDEEYVREQLDIMNRKTAAIDKIKRSVNGET 996
V ++ EY+ E + AA++ + + ++
Sbjct: 819 VANF----------------------------EYIDE------NEAAALEAQRVAAESKS 844
Query: 997 FGSDSEDEGNSKSRKRSK-----ANNLDAFGEREIRALYKCILRFGDIENKFEELIADGS 1051
+S+ + + K A L+A G+R+ + D+ E++ +DG
Sbjct: 845 SAGNSDRASYWEELLKDKFELHQAEELNALGKRKRSRKQLVSIEEDDLAG-LEDVSSDGD 903
Query: 1052 LPVKSIDRYKELYHEMITEAETLMRDEEAKRHEIFSKLEKDAAEYRQKIK-NLEIKPEDD 1110
E Y T+ E + + R YR+K + NLE
Sbjct: 904 ----------ESYEAESTDGEAAGQGVQTGRR-----------PYRRKGRDNLE------ 936
Query: 1111 AGKETPITLLSAKRREKRAILFEFHDTKALNADTLVNRRDNLKFLSNFVERNYKDDPL-- 1168
P L+ + R R + F +A+ TL+ R + FL + E ++ P
Sbjct: 937 -----PTPLMEGEGRSFRVLGFN-QSQRAIFVQTLM--RYGILFLKHIAEEIDENSPTFS 988
Query: 1169 -------------------------QFKFVNKNP-KPVSAWNC-----------VWGKED 1191
+ KFV +P KPV +W +E
Sbjct: 989 DGVPKEGLRIEDVLVRIALLILVQEKVKFVEDHPGKPVFPSRILERFPGLRSGKIWKEEH 1048
Query: 1192 DEKLLIGIYKYGYGAWMQIRDDPFLGLTE 1220
D+ ++ + K+GYG W I DD LG+ E
Sbjct: 1049 DKIMIRAVLKHGYGRWQAIVDDKELGIQE 1077
>At5g44800 [R] KOG0383 Predicted helicase
Length = 2228
Score = 483 bits (1244), Expect = e-136
Identities = 329/922 (35%), Positives = 471/922 (50%), Gaps = 109/922 (11%)
Query: 146 DEDLMESSEEQDEGHNLDSEDMDLQDGYSASP-----SPQQETHSIDIVVDHRLKEGVDN 200
+E L E ++D EDM + + + + QET V D ++E V
Sbjct: 466 EEMLSEDISNATLSRHVDDEDMKVSETHVSVERELLEEAHQETGEKSTVADEEIEEPVAA 525
Query: 201 SGSTKNRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFII 260
S D+ ++EFL+KW D+S++HN+W S +LK + L+ + Y +I
Sbjct: 526 KTS------DLIGETVSYEFLVKWVDKSNIHNTWISEAELKGLAKRKLENYKAKYGTAVI 579
Query: 261 LDQEVRADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLV 320
E +++K P+RI+ + R E +Q Y V
Sbjct: 580 NICE--------------------------DKWKQPQRIV-ALRVSKE----GNQEAY-V 607
Query: 321 KWRRLNYDECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQP 380
KW L YDECTWE E + + + ++ K + +NS P +R + L QP
Sbjct: 608 KWTGLAYDECTWESLEEPILKHSSHLIDLFHQYEQKTLERNSKGNPTRERGEVVTLTEQP 667
Query: 381 SFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPH 440
++GG L QL +NW+ W K+ N ILADEMGLGKTV +F+S L + P
Sbjct: 668 QELRGGALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPC 727
Query: 441 LVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYT-NPQAKGKK--HLKF 497
LV+VPLSTMP W F WAP LN V Y G+ R +I+DYE++ N KK KF
Sbjct: 728 LVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYKF 787
Query: 498 NVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPL 557
NVLLTTYE +L D S L + W+ L VDE HRLKN+ES L+ LN+F +R+L+TGTPL
Sbjct: 788 NVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPL 847
Query: 558 QNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKS 617
QNNI E+ L+NFL P F + D E + +L K + P +LRRLKKD ++
Sbjct: 848 QNNIGEMYNLLNFLQPSSFPSLSSFEERFHDLTSAEKVEELKKLVAPHMLRRLKKDAMQN 907
Query: 618 LPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKG-GHVSLLNVMNELKKASNHPYL 676
+P KTER++ VEL+ +Q EYY+ +LTKNY L + KG S+LN++ +L+K NHPYL
Sbjct: 908 IPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYL 967
Query: 677 FDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRIL 736
E S E + I +S +GHRVLIFSQM ++L
Sbjct: 968 IPGTEPE--------SGSLEFLHDMRIKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLL 1019
Query: 737 DILGDYLSIK--GINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMT 794
DIL DYL+I+ F+R+DG+V A R+ +I FN +D N FVFLLSTRA GLGINL T
Sbjct: 1020 DILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFN-QDKNRFVFLLSTRACGLGINLAT 1078
Query: 795 ADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYA 854
ADTVII+DSD+NP AD+QAM RAHRIGQ ++VYR V + +VEE +L+ A+KK++L+
Sbjct: 1079 ADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQL 1138
Query: 855 IISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDL----NLDEVLN 910
+ NK S K E +IL++G +F + + K + NLD +++
Sbjct: 1139 FV-------NKSGSQK-------EFEDILRWGTEELFNDSAGENKKDTAESNGNLDVIMD 1184
Query: 911 HAEDHITTPELGESNLGGEEFLRQFEVTDYKADVDWDDIIPXXXXXXXXXXXQRRIDEEY 970
GG + Q + T+ + WDDI
Sbjct: 1185 -------LESKSRKKGGGLGDVYQDKCTEGNGKIVWDDIA-------------------- 1217
Query: 971 VREQLDIMNRKTAAIDKIKRSVNGETFGSDSEDEGNSKSRK-----RSKANNLDAFGERE 1025
+ + LD N ++A+ D ++ + GS E N ++ + S A D GE
Sbjct: 1218 IMKLLDRSNLQSASTDAADTELDNDMLGSVKPVEWNEETAEEQVGAESPALVTDDTGEPS 1277
Query: 1026 IRALYKCILRFGDIENKFEELI 1047
++ F + EN+++ L+
Sbjct: 1278 SERKDDDVVNFTE-ENEWDRLL 1298
>Hs20533808 [R] KOG0383 Predicted helicase
Length = 1954
Score = 480 bits (1235), Expect = e-135
Identities = 293/714 (41%), Positives = 403/714 (56%), Gaps = 61/714 (8%)
Query: 219 EFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTREDIEV 278
EF +KWA S+ H SW L+ T + Y++ +D+ D + ED +
Sbjct: 510 EFFVKWAGLSYWHCSWVKELQLELYHTVMYRN----YQRKNDMDEPPPFDYGSGDEDGKS 565
Query: 279 -----MDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTWE 333
D + + + F + + + R N + YL+KW+ L YD+CTWE
Sbjct: 566 EKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWE 625
Query: 334 VASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKL----------------- 376
+ + + + + ++M + P K +KL
Sbjct: 626 IDDIDIPYYDNLKQAYWG--HRELMLGEDTRLPKRLLKKGKKLRDDKQEKPPDTPIVDPT 683
Query: 377 ---DAQPSFIK--GGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLI 431
D QP +I GG L +QL G+NW+ F W++ + ILADEMGLGKTVQT+ F+ L
Sbjct: 684 VKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLY 743
Query: 432 YARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQA-- 489
GP+LV PLST+ W+ F+ WAP V Y G++ SR +I++ EF A
Sbjct: 744 KEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIR 803
Query: 490 KGKK--------HLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESL 541
GKK +KF+VLLT+YE I D++ LGSI+W L VDEAHRLKN +S + L
Sbjct: 804 SGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVL 863
Query: 542 NSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKR 601
NS+K+ +LL+TGTPLQNN++EL L+NFL P RF + E D +E+ I+ LH
Sbjct: 864 NSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDL 923
Query: 602 LQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLL 661
L P +LRRLK DV K++P+KTE I+RVELS +Q +YYK ILT+N+ AL S G VSLL
Sbjct: 924 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLL 983
Query: 662 NVMNELKKASNHPYLFDNA--EERVLSKFG-DGHKSRENILRGLIMSSGXXXXXXXXXXX 718
N+M +LKK NHPYLF A E VL DG L+ SSG
Sbjct: 984 NIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDG--------SSLVKSSGKLMLLQKMLKK 1035
Query: 719 XXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFV 778
+GHRVLIFSQM ++LD+L D+L +G ++R+DG + R+ +ID FNA + F
Sbjct: 1036 LRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFC 1095
Query: 779 FLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVE 838
FLLSTRAGGLGINL TADTVII+DSDWNP D+QA +RAHRIGQ VM+YRFV++ +VE
Sbjct: 1096 FLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVE 1155
Query: 839 EEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFK 892
E + + A++KM+L + ++ G+ G+K S K EL +ILKFG +FK
Sbjct: 1156 ERITQVAKRKMMLTHLVVRPGL--GSKSGSMTKQ-----ELDDILKFGTEELFK 1202
>Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1970
Score = 477 bits (1228), Expect = e-134
Identities = 321/882 (36%), Positives = 486/882 (54%), Gaps = 68/882 (7%)
Query: 82 SKRKPTRAPSAKRGRKRVSAGNSKSKRQAKRVE--------ESDEENVVLPTRFSSRNNN 133
S +KP SA + K+V+ G ++ + + E DE+ V R S +
Sbjct: 130 SNKKPDSEASALK--KKVNKGKTEGSENSDLDKTPPPSPPPEEDEDPGVQKRRSSRQVKR 187
Query: 134 KVINYTLNDDSNDEDLMESSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSIDIVVDHR 193
K YT D + S EE D D++ + S S QQE S+D +
Sbjct: 188 K--RYT-----EDLEFKISDEEAD-----DADAAGRDSPSNTSQSEQQE--SVD--AEGP 231
Query: 194 LKEGVDNSGSTKNRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIEN 253
+ E + +S S K ++ + + EF +K+ + S+LH W S EDL+++ KRI+
Sbjct: 232 VVEKIMSSRSVKKQKESGEEVEIE-EFYVKYKNFSYLHCQWASIEDLEKD-----KRIQQ 285
Query: 254 YYKQFIILDQEVRADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGS 313
K+F + + + ++E E ++ E +RI+D R + D G
Sbjct: 286 KIKRFKAKQGQNKF----------LSEIEDELFNPDYVEV---DRIMDFAR--STDDRGE 330
Query: 314 SQLKYLVKWRRLNYDECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKF 373
YLVKW L Y++ TWE +I + +++EF+ + + + PA+ +
Sbjct: 331 PVTHYLVKWCSLPYEDSTWERRQDIDQA---KIEEFEKLMSREPETERVERPPADD---W 384
Query: 374 EKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYA 433
+K ++ + +LR++QL G+NW+ F W N ILADEMGLGKT+Q+++F+ + IY
Sbjct: 385 KKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYL 443
Query: 434 RRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFY-TNPQAKG- 491
+ +GP LV+ PLST+P W+ F W LN V Y G+QASR IQ YE Y +PQ +
Sbjct: 444 KGIHGPFLVIAPLSTIPNWEREFRTWTE-LNVVVYHGSQASRRTIQLYEMYFKDPQGRVI 502
Query: 492 KKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLL 551
K KF+ ++TT+E IL D L +I W+ + +DEAHRLKN L E L + +++L
Sbjct: 503 KGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVL 562
Query: 552 ITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLK 611
+TGTPLQN ++EL +L++FL P RF + E D + EE ++ L L+P +LRRLK
Sbjct: 563 LTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK 622
Query: 612 KDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHV-SLLNVMNELKKA 670
+DVEK+L K E I+ VEL+++Q +YY+ IL KN++ L+ G +V +LLN M EL+K
Sbjct: 623 EDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKC 682
Query: 671 SNHPYLFDNAEERVLSKFGDGH--KSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLI 728
NHPYL + AEE++L +F + H +S + L+ +I ++G GHRVLI
Sbjct: 683 CNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLI 742
Query: 729 FSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGL 788
FSQMVR LDIL DYL + ++R+DG V R+ +ID F+ DS+ FVFLL TRAGGL
Sbjct: 743 FSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL 802
Query: 789 GINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKK 848
GINL ADT IIFDSDWNPQ DLQA AR HRIGQ V +YR +++++ E E+ ++A K
Sbjct: 803 GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLK 862
Query: 849 MILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGA-GNMFKPNDNQQKLEDLNLDE 907
+ L+ A+ L G + ++ + S E+ ++L+ GA G + D K + ++D+
Sbjct: 863 LGLDKAV--LQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQ 920
Query: 908 VLNHAEDHITTPELGESNLGGEEFLR-QFEVTDYKADVDWDD 948
+L IT ES G F + F + + D+ DD
Sbjct: 921 ILLRRTHTITI----ESEGKGSTFAKASFVASGNRTDISLDD 958
>CE03657 [R] KOG0383 Predicted helicase
Length = 1787
Score = 474 bits (1221), Expect = e-133
Identities = 312/879 (35%), Positives = 456/879 (51%), Gaps = 118/879 (13%)
Query: 215 RANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRI-------EN--YYKQFIILDQEV 265
R EF +KW ++ W S E L + L R+ EN +++ +
Sbjct: 422 RREREFFVKWKYLAYWQCEWLS-ETLMDVYFTALVRMYWRKVDSENPPIFEESTLSRHHS 480
Query: 266 RADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRL 325
DPY RE F ++ V + R N SQ YLVKW+ L
Sbjct: 481 DHDPYKLRE--------------RFYQYGVKPEWMQIHRIINHLSYAKSQQDYLVKWKEL 526
Query: 326 NYDECTWEVA-SEIVKMAPEQVKEFQNRTN--SKIMPQNSSNYPANQRP----------- 371
+Y+ TWE ++I +K + +R + +P+N A QR
Sbjct: 527 SYEHATWERDDTDIANYEDAIIKYWHHRERMLNDEVPRNVQKMIAKQREAKGLGPKEDEV 586
Query: 372 -----KFEKLD------AQPSFIK--GGELRDFQLTGINWMAFLWSKNDNGILADEMGLG 418
K EK+D QP FI GG L +QL GINW+ WS + ILADEMGLG
Sbjct: 587 TSRRKKREKIDILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLG 646
Query: 419 KTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLI 478
KTVQ+++F+ L+ GP L+ PLST+ W+ + W P V Y+G++ SR +I
Sbjct: 647 KTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVI 706
Query: 479 QDYEF-YTNPQAKGK---------KHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAH 528
+++EF + + +G ++LKF+VLLT+YE I D++ L SI W L VDEAH
Sbjct: 707 REHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAH 766
Query: 529 RLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQD 588
RLKN +S+ +++L + + R+L+TGTPLQNN++EL L+NFL P RF + E +
Sbjct: 767 RLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE 826
Query: 589 EQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSA 648
+E+ I LH L P +LRRLK DV +PSK E I+RVELS +Q +YYKNILT+N+ A
Sbjct: 827 ISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDA 886
Query: 649 LTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRG--LIMSS 706
L G +SL+N++ ELKK NHPYLF + + K + + G LI ++
Sbjct: 887 LNVKNGGTQMSLINIIMELKKCCNHPYLF-------MKACLEAPKLKNGMYEGSALIKNA 939
Query: 707 GXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISI 766
G GHRVLIFSQM +LDIL D+ ++G ++R+DG++ QR+ +I
Sbjct: 940 GKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAI 999
Query: 767 DHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHV 826
D +NA + FVFLLSTRAGGLGINL TADTVII+DSDWNP D+QA +RAHR+GQK+ V
Sbjct: 1000 DRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKV 1059
Query: 827 MVYRFVSKDTVEEEVLERARKKMILEYAII--SLGVTDGNKISSTKKNEPSAGELSEILK 884
M+YRFV+K +VEE + A+KKM+L + ++ LG DG +S T EL ++L+
Sbjct: 1060 MIYRFVTKGSVEERITSVAKKKMLLTHLVVRAGLGAKDGKSMSKT--------ELDDVLR 1111
Query: 885 FGAGNMF------------------KPNDNQQKLEDLNLDEVLNHAEDHITTPELGESNL 926
+G +F KPN+ + +D +D +L+ ++ E G+
Sbjct: 1112 WGTEELFKEEEAPVEGADGEGTSSKKPNEQEIVWDDAAVDFLLDRNKE-----EEGQDGE 1166
Query: 927 GGE----EFLRQFEVTDYKA--------DVDWDDIIPXXXXXXXXXXXQRRIDEEYVREQ 974
E E+L F+V Y D D ++I ++ + Y ++Q
Sbjct: 1167 KKEHWTNEYLSSFKVATYNTKEADDADDDEDETEVIKEGTEEQDPNYWEKLLKHHYEQDQ 1226
Query: 975 LDIMNRKTAAIDKIKRSVN--GETFGSDSEDEGNSKSRK 1011
+ +K +++R VN E G D + N + +
Sbjct: 1227 -ETELQKLGKGKRVRRQVNYASENMGQDWSAQNNQQQEE 1264
>Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1953
Score = 474 bits (1220), Expect = e-133
Identities = 339/1049 (32%), Positives = 545/1049 (51%), Gaps = 102/1049 (9%)
Query: 219 EFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTREDIEV 278
EF +K+ + S+LH W + L+++ KRI K+F ++R + ED E
Sbjct: 39 EFFVKYKNYSYLHCEWATISQLEKD-----KRIHQKLKRFKTKMAQMR---HFFHEDEEP 90
Query: 279 MDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTWEVASEI 338
+ ++ +RI+D ++D +G + YLVKW L Y++ TWE+ ++
Sbjct: 91 FN----------PDYVEVDRILDESHSIDKD-NGEPVIYYLVKWCSLPYEDSTWELKEDV 139
Query: 339 VKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQLTGINW 398
+ +++EF+ R S+ N P Q ++KL+ + +LR++QL G+NW
Sbjct: 140 DE---GKIREFK-RIQSRHPELKRVNRP--QASAWKKLELSHEYKNRNQLREYQLEGVNW 193
Query: 399 MAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDK 458
+ F W N ILADEMGLGKT+Q+++F+ +Y +GP LV+ PLST+ W+ F+
Sbjct: 194 LLFNWYNRQNCILADEMGLGKTIQSIAFLQE-VYNVGIHGPFLVIAPLSTITNWEREFNT 252
Query: 459 WAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKK---HLKFNVLLTTYEYILKDRSTLG 515
W +N + Y G+ ASR +IQ YE Y ++G+ KF+ L+TT+E IL D L
Sbjct: 253 WTE-MNTIVYHGSLASRQMIQQYEMYCK-DSRGRLIPGAYKFDALITTFEMILSDCPELR 310
Query: 516 SIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGR 575
I+W+ + +DEAHRLKN L +SL + +++L+TGTPLQN ++EL +L++FL P +
Sbjct: 311 EIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQ 370
Query: 576 FTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQT 635
F + E + D + EE ++ L L+P +LRRLK+DVEK+L K E I+ VEL+++Q
Sbjct: 371 FPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQK 430
Query: 636 EYYKNILTKNYSALTSGIKGGHVS---LLNVMNELKKASNHPYLFDNAEERVLSKFGDGH 692
+YY+ IL KN+S L+ G GH + LLN M EL+K NHPYL + AEE++L++F +
Sbjct: 431 KYYRAILEKNFSFLSKG--AGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREAC 488
Query: 693 K--SRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINF 750
+ L+ ++ S+G GH+VLIFSQMVR LDIL DYL + +
Sbjct: 489 HIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLY 548
Query: 751 QRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQAD 810
+R+DG V R+ +ID F+ DS+ FVFLL TRAGGLGINL ADT IIFDSDWNPQ D
Sbjct: 549 ERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQND 608
Query: 811 LQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAII-SLGVTDGNKISST 869
LQA AR HRIGQ V VYR +++++ E E+ ++A K+ L+ A++ S+ DGN T
Sbjct: 609 LQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGN---IT 665
Query: 870 KKNEPSAGELSEILKFGA-GNMFKPNDNQQKLEDLNLDEVLNHAEDHITTPELGESNLGG 928
+ S E+ ++L+ GA + + +D K + ++D++L IT ES G
Sbjct: 666 GIQQFSKKEIEDLLRKGAYAAIMEEDDEGSKFCEEDIDQILLRRTTTITI----ESEGKG 721
Query: 929 EEFLR-QFEVTDYKADVDWDDIIPXXXXXXXXXXXQRRIDEEYVREQLDI------MNRK 981
F + F ++ + D+ DD + +D + + + ++ + ++
Sbjct: 722 STFAKASFVASENRTDISLDD-----PNFWQKWAKKADLDMDLLNSKNNLVIDTPRVRKQ 776
Query: 982 TAAIDKIKRSVNGETFGSDSEDEGNSKSRKRSKANNLDAFGEREIRALYKCILRFG---- 1037
T +K E +SED+ +SR+ + + A+G + + K +L +G
Sbjct: 777 TRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHH---AYGRTDCFRVEKHLLVYGWGRW 833
Query: 1038 ----------------DIENKFEELIADGSLPVKSIDRYKELYHEMITEAETLMRDEEAK 1081
D+E ++ L + + K ++I+ AE + +E +
Sbjct: 834 RDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENIKGFIWDLISPAEN-GKTKELQ 892
Query: 1082 RHEIFSKLEKDAAEYRQKIKN---LEIKPEDDAGKETPITLLSAKRREK------RAILF 1132
H S + +K+K+ +I D K P TL + +K +L
Sbjct: 893 NHSGLS-IPVPRGRKGKKVKSQSTFDIHKADWIRKYNPDTLFQDESYKKHLKHQCNKVLL 951
Query: 1133 EFHDTKALNADTLVNRRDNLKFLSNFVERNYKDDPLQFKFVNKNPKPVSAWNCVWGKEDD 1192
L + + ++ + K L + + + F V++ P + W W E D
Sbjct: 952 RVRMLYYLRQEVIGDQAE--KVLGGAIA---SEIDIWFPVVDQLEVP-TTW---WDSEAD 1002
Query: 1193 EKLLIGIYKYGYGAWMQIRDDPFLGLTEK 1221
+ LLIG++K+GY + +R DP L EK
Sbjct: 1003 KSLLIGVFKHGYEKYNTMRADPALCFLEK 1031
>Hs4557453 [R] KOG0383 Predicted helicase
Length = 1912
Score = 472 bits (1215), Expect = e-132
Identities = 294/768 (38%), Positives = 419/768 (54%), Gaps = 62/768 (8%)
Query: 215 RANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTRE 274
R +F +KW S+ H SW S L+ + + + + D +R+
Sbjct: 538 RPERQFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRK 597
Query: 275 DIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTWEV 334
+ D + + F + + + R N + YL+KWR L YD+ +WE
Sbjct: 598 R-KNKDPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWE- 655
Query: 335 ASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFE-----------------KLD 377
SE V++ + + Q+ N + + + P + K + K +
Sbjct: 656 -SEDVEIQDYDLFK-QSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYE 713
Query: 378 AQPSFIK--GGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARR 435
QP ++ GG L +Q+ G+NW+ F W++ + ILADEMGLGKTVQT F+ L
Sbjct: 714 RQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGH 773
Query: 436 QNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQA------ 489
GP LV PLST+ W+ F+ WAP + V Y+G++ SR +I++ EF A
Sbjct: 774 SKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKK 833
Query: 490 ----KGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFK 545
K + +KF+VLLT+YE I D + LGSI W L VDEAHRLKN +S + LN +
Sbjct: 834 ASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYS 893
Query: 546 VANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPF 605
+ ++LL+TGTPLQNN++EL L+NFL P RF + E D +E+ I+ LH L P
Sbjct: 894 LQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPH 953
Query: 606 ILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMN 665
+LRRLK DV K++PSKTE I+RVELS +Q +YYK ILT+N+ AL + G VSLLNV+
Sbjct: 954 MLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVM 1013
Query: 666 ELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHR 725
+LKK NHPYLF A K +G ++R +SG GHR
Sbjct: 1014 DLKKCCNHPYLFPVAAMEA-PKMPNGMYDGSALIR----ASGKLLLLQKMLKNLKEGGHR 1068
Query: 726 VLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRA 785
VLIFSQM ++LD+L D+L +G ++R+DG + R+ +ID FNA + F FLLSTRA
Sbjct: 1069 VLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRA 1128
Query: 786 GGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERA 845
GGLGINL TADTVII+DSDWNP D+QA +RAHRIGQ VM+YRFV++ +VEE + + A
Sbjct: 1129 GGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVA 1188
Query: 846 RKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKP------NDNQQ- 898
+KKM+L + ++ G+ G+K S K EL +ILKFG +FK DN++
Sbjct: 1189 KKKMMLTHLVVRPGL--GSKTGSMSKQ-----ELDDILKFGTEELFKDEATDGGGDNKEG 1241
Query: 899 ------KLEDLNLDEVLNHAEDHITTPELGESNLGGEEFLRQFEVTDY 940
+D ++ +L+ +D EL G E+L F+V Y
Sbjct: 1242 EDSSVIHYDDKAIERLLDRNQDETEDTEL----QGMNEYLSSFKVAQY 1285
>Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2713
Score = 472 bits (1214), Expect = e-132
Identities = 384/1275 (30%), Positives = 607/1275 (47%), Gaps = 169/1275 (13%)
Query: 40 EEVIRPRRGKQKRKAVKQEHNYDXXXXXXXXIDDFSDTDDFGSKRKPTRAPSAKRGRKRV 99
+E PR+ ++ +KA +EH + D RKP A K +++
Sbjct: 123 KEPKEPRKAEEPKKA--KEHK------------EPKQKDGAKKARKPREASGTKEAKEKR 168
Query: 100 SAGNSKSKRQAKRVEESDEENVVLPTRFSSRNNNKVINYTLNDDSNDEDLMESSEEQDEG 159
S +S ++ ++++ + V + R + + D + S EE E
Sbjct: 169 SCTDSAARTKSRKASKEQGPTPVEKKKKGKRKSETTVESLELDQGLTNPSLRSPEESTES 228
Query: 160 HNLD-------------SEDMDLQ----DG--------------------YSASPSPQQE 182
+ +ED+D + DG + A P+ +
Sbjct: 229 TDSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDD 288
Query: 183 THSIDIVVDHRLKEGVDNSGSTKNRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDLKE 242
+ I+ ++ + + V +D++ F +K+ + S+LH W + E+L++
Sbjct: 289 ANIIEKILASKTVQEVHPGEPP----FDLEL------FYVKYRNFSYLHCKWATMEELEK 338
Query: 243 NG--TKGLKRIENYYKQFIILDQEVRADPYTTREDIEVMDLEHERRIDEFEEFKVPERII 300
+ + +KR N Q + + +P ED+ D RI E K E
Sbjct: 339 DPRIAQKIKRFRNKQAQM----KHIFTEP---DEDLFNPDYVEVDRILEVAHTKDAE--- 388
Query: 301 DSERFENEDGSGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQ 360
+G YLVKW L Y+E TWE+ ++ P +VKEF++ +++P+
Sbjct: 389 ----------TGEEVTHYLVKWCSLPYEESTWELEEDV---DPAKVKEFESL---QVLPE 432
Query: 361 -NSSNYPANQRPKFEKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGK 419
PA+ ++KL+ + +LR++QL G+NW+ F W N ILADEMGLGK
Sbjct: 433 IKHVERPASD--SWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGK 490
Query: 420 TVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQ 479
T+Q+++F+S I+ R +GP L++ PLST+ W+ F W +N + Y G+Q SR +IQ
Sbjct: 491 TIQSITFLSE-IFLRGIHGPFLIIAPLSTITNWEREFRTWTE-MNAIVYHGSQISRQMIQ 548
Query: 480 DYEF-YTNPQAKGKKHL-KFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSL 537
YE Y + Q + KF+V++TT+E IL D L I W + +DEAHRLKN L
Sbjct: 549 QYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKL 608
Query: 538 YESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRD 597
E L + +++L+TGTPLQN+++EL +L+NFL P +F + E D + EE ++
Sbjct: 609 LEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDLKTEEQVKK 668
Query: 598 LHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGH 657
L L+P +LRRLK DVEK+L K E I+ VEL+++Q +YY+ IL KN+S LT G +
Sbjct: 669 LQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHN 728
Query: 658 V-SLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHK--SRENILRGLIMSSGXXXXXXX 714
+ +L+N M EL+K NHPYL + AEE++L F H + + L+ +I ++G
Sbjct: 729 MPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDK 788
Query: 715 XXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDS 774
GH+VLIFSQMVR LDIL DYL + ++R+DG V R+ +ID F DS
Sbjct: 789 LLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDS 848
Query: 775 NDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSK 834
+ FVFLL TRAGGLGINL ADT IIFDSDWNPQ DLQA AR HRIGQ V VYR +++
Sbjct: 849 DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR 908
Query: 835 DTVEEEVLERARKKMILEYAIISLGVTDGNKISSTK-KNEPSAGELSEILKFGA-GNMFK 892
++ E E+ ++A K+ L+ A++ D N+ T + S E+ ++L+ GA G +
Sbjct: 909 NSYEREMFDKASLKLGLDKAVLQ----DINRKGGTNGVQQLSKMEVEDLLRKGAYGALMD 964
Query: 893 PNDNQQKLEDLNLDEVLNHAEDHITTPELGESNLGGEEFLR-QFEVTDYKADVDWDDIIP 951
D K + ++D++L IT G+ G F + F + + D+ DD P
Sbjct: 965 EEDEGSKFCEEDIDQILQRRTHTITIQSEGK----GSTFAKASFVASGNRTDISLDD--P 1018
Query: 952 XXXXXXXXXXXQRRIDEEYVREQLDIMNRKTAAIDKIKRSVNGETFGSDSEDE------- 1004
++D E E +++ ID+ + + + S EDE
Sbjct: 1019 NFWQKWAKIA---KLDTEAKNE------KESLVIDRPRVRKQTKHYNSFEEDELMEFSEL 1069
Query: 1005 GNSKSRKRSKANNLDAFGEREIRA----LYKCILRFG---------------DIENKFEE 1045
+ + +++ L+ R +RA + K +L FG + K E
Sbjct: 1070 DSDSDERPTRSRRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDME 1129
Query: 1046 LIADGSLPVKSIDRYK--ELYHEMITEAETLMRDEEAKRHEIFSKLEKDAAEYR--QKIK 1101
+I +L V + YK E I E T +D +A+ + S L R +K K
Sbjct: 1130 MIC-RALLVYCVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTK 1188
Query: 1102 NL----EIKPEDDAGKETPITLLSAKRREKRAILFEFHDTKALNADTLVNRRDNLKFLSN 1157
N E+K D P +L +K + H K L ++ + L
Sbjct: 1189 NQLLIPELKDADWLATCNPEVVLHDDGYKKH---LKQHCNKVLLRVRMLYYL-KAEILGE 1244
Query: 1158 FVERNYKDDP-----LQFKFVNKNPKPVSAWNCVWGKEDDEKLLIGIYKYGYGAWMQIRD 1212
E+ ++ P + ++ PV W W E D+ LLIG++K+GY + +R
Sbjct: 1245 AAEKAFEGSPARELDVPLPDIDYMEIPVD-W---WDAEADKSLLIGVFKHGYERYNAMRA 1300
Query: 1213 DPFLGLTEKLFLNNE 1227
DP L EK+ + +E
Sbjct: 1301 DPALCFLEKVGMPDE 1315
>CE17716 [R] KOG0383 Predicted helicase
Length = 1829
Score = 470 bits (1210), Expect = e-132
Identities = 312/935 (33%), Positives = 473/935 (50%), Gaps = 138/935 (14%)
Query: 215 RANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTRE 274
R EF +KW S+ SW S +E +++ I+L
Sbjct: 410 RREREFFVKWKYLSYWQCSWVSE-----------MLLEVHFRMLILLYWRKNDSDAPPEF 458
Query: 275 DIEVMDLEHE-----RRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDE 329
+ V H + + F ++ + + R N SQ YLVKW+ L+YD+
Sbjct: 459 EESVTSRHHSDNDPYKLRERFYQYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQ 518
Query: 330 CTWEVASEIVKMAPEQVKEFQNRTNSKI---MPQNSSNYPANQRP--------------K 372
TWE + E + ++ SK+ +P+N A R K
Sbjct: 519 ATWERDDSNIANYEEAIIKYWQHRESKLNEDIPKNVQKMIAKHREAKGLPPKEDEKKKKK 578
Query: 373 FEKLD------AQPSFIK--GGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTV 424
EK+D QP ++ GG+L +QL G+NW+ WS + ILADEMGLGKTVQ++
Sbjct: 579 REKIDIRKKYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSL 638
Query: 425 SFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFY 484
+F+ L+ GP L+ PLST+ W+ ++W P V Y+G + +R +++++EF
Sbjct: 639 TFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFS 698
Query: 485 -------TNPQA---KGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAE 534
+ P+A K +++KF+VLLT+YE I D++ L SI+W L VDEAHRLKN +
Sbjct: 699 FVEGAVRSGPKASKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQ 758
Query: 535 SSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEY 594
S +++LN + + R+L+TGTPLQNN++EL L+NFL RF + E + +E+
Sbjct: 759 SLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQ 818
Query: 595 IRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIK 654
I LH L P +LRRLK DV +PSK+E I+RVELS +Q ++YKNILT+N+ AL
Sbjct: 819 IEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNG 878
Query: 655 GGHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRG--LIMSSGXXXXX 712
G +SL+NV+ ELKK NHPYLF AE + K + + G LI +SG
Sbjct: 879 GTQMSLMNVLMELKKCCNHPYLFVKAEL-------EAPKEKNGMYEGTALIKNSGKFVLL 931
Query: 713 XXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAE 772
GHRVLIFSQM R+LDI+ D +G ++R+DG++ R+ +ID +NA
Sbjct: 932 QKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAP 991
Query: 773 DSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFV 832
+ F+FLLSTRAGGLGINL TADTVII+DSDWNP D+QA +RAHR+GQK+ VM+YRFV
Sbjct: 992 GAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFV 1051
Query: 833 SKDTVEEEVLERARKKMILEYAII--SLGVTDGNKISSTKKNEPSAGELSEILKFGAGNM 890
+K +VEE++ A+KKM+L + ++ LG +G +S T EL ++L++G +
Sbjct: 1052 TKKSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKT--------ELDDVLRWGTEEL 1103
Query: 891 FKPN------DNQQK---------LEDLNLDEVLNHA-EDHITTPELGESNLGGE-EFLR 933
F + + +K +D +D +L+ + ++ E GE + E+L
Sbjct: 1104 FSEDLDAAEGEGSEKKGAAAQEIVWDDAAVDALLDRSNKEETPAGEDGEEKAEWQNEYLS 1163
Query: 934 QFEVTDYKA------------------------DVD-WDDIIPXXXXXXXXXXXQRRIDE 968
F+V Y+ D D W+ ++ Q+
Sbjct: 1164 SFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKLLKHHYEQDREIELQKLGKG 1223
Query: 969 EYVREQLDIMNRKTAA--------------IDKIKRSVNGETFGSDSEDEGNSKSRKR-- 1012
+ VR+Q++ + + + S NG+ SD +D K R+R
Sbjct: 1224 KRVRKQINYASENMGTDWSKQNQTQDDDDDNESYRGSDNGDGLNSDEDDYDEKKKRRRDE 1283
Query: 1013 -------SKAN---NLDAFGEREIRALYKCILRFG 1037
+K N + F R+ +A Y ++R+G
Sbjct: 1284 EKMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWG 1318
>7293795 [R] KOG0383 Predicted helicase
Length = 883
Score = 467 bits (1202), Expect = e-131
Identities = 284/750 (37%), Positives = 419/750 (55%), Gaps = 65/750 (8%)
Query: 219 EFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTREDIEV 278
E+ IKW S+ H W + +L + R D+E
Sbjct: 112 EYFIKWHGMSYWHCEWIPEGQM-------------------LLHHASMVASFQRRSDMEE 152
Query: 279 MDLE---------HER--RIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNY 327
LE HER R E+ + +R+I+ +E+ +G + YLVKWR L+Y
Sbjct: 153 PSLEELDDQDGNLHERFYRYGIKPEWLLVQRVIN----HSEEPNGGTM--YLVKWRELSY 206
Query: 328 DECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIK--G 385
++ +WE S+ + + + ++ +S Q P K K + QP F+K G
Sbjct: 207 NDSSWERESDSIPGLNQAIALYKKLRSSNKGRQRDRPAPTIDLNK--KYEDQPVFLKEAG 264
Query: 386 GELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVP 445
+L FQ+ G++W+ + W + ILADEMGLGKT+QTV F+ L GP L+ VP
Sbjct: 265 LKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVP 324
Query: 446 LSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFY-----TNPQAKGKKHLKFNVL 500
LST+ W+ + WAP L CV Y+G + +R +I+ +E T + + KFNV+
Sbjct: 325 LSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVM 384
Query: 501 LTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNN 560
LT+YE+I D + LG I W L VDEAHRL++ +S + L+ +++ +LL+TGTPLQNN
Sbjct: 385 LTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNN 444
Query: 561 IKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPS 620
++EL L+NFL G+F Q E D +EE ++ LH+ L+P +LRRLK DV KS+P
Sbjct: 445 LEELFHLLNFLSSGKFNDLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPP 504
Query: 621 KTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDN- 679
K+E I+RVELS +Q ++YK+ILTKN+ AL G SLLN+M +L+K NHPYLF +
Sbjct: 505 KSEFIVRVELSSMQKKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSA 564
Query: 680 AEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDIL 739
AEE +S G S L +SG D HRVL+FSQM ++L++L
Sbjct: 565 AEEATISPSGLYEMS------SLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVL 618
Query: 740 GDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVI 799
+L +G + R+DG++ R+ +ID FN S FVFLLSTRAGGLGINL TADTVI
Sbjct: 619 EHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVI 678
Query: 800 IFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLG 859
IFDSDWNP D+QA +RAHR+GQK VM+YRFV+ ++VEE +++ A+ KM+L + ++ G
Sbjct: 679 IFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRPG 738
Query: 860 VTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQ-KLEDLNLDEVLNHAEDHITT 918
+ G ++ K+ EL +IL+FG ++FK ++ +D + ++L+ T
Sbjct: 739 M--GGMTTNFSKD-----ELEDILRFGTEDLFKDGKSEAIHYDDKAVADLLDR-----TN 786
Query: 919 PELGESNLGGEEFLRQFEVTDYKADVDWDD 948
+ E E+L F+V Y D ++
Sbjct: 787 RGIEEKESWANEYLSSFKVASYATKEDHEE 816
>CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2957
Score = 450 bits (1158), Expect = e-126
Identities = 373/1200 (31%), Positives = 579/1200 (48%), Gaps = 134/1200 (11%)
Query: 73 DFSDTDDFGSKRKPTRAPSAKRG---RKRVSAGNSKSKRQAKRVEESDEENVVLPTRFSS 129
D SD DDF P R K+G +K+ + AK +E DE + + T
Sbjct: 914 DDSDDDDF----YPQRGRGKKKGGGGKKKADPTDEAGVEGAKSDDEDDEFLMKIDTPAPD 969
Query: 130 RNN---NKVINYTLNDDSNDEDLMESSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSI 186
N K++N + E +E +E SE+ P++ +
Sbjct: 970 PNAMVVEKILNMRMGKVEKKVPETEVAEGSEENGEEKSEE-------KVKKEPKENGENG 1022
Query: 187 DIVVDHRLKEGVDNSGSTKNRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDLKENGTK 246
+ V + + S + + +V+ +FLIKW +S++H W++ +L E
Sbjct: 1023 ESVGNGESSKSKTESETNEIEEEEVE------QFLIKWKGRSYVHCEWKTAAELLEID-- 1074
Query: 247 GLKRIENYYKQFIILDQEVRADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFE 306
KR+E K+F ++ M E D +F + +R++D
Sbjct: 1075 --KRVEAKIKRF----------------KVKKMSSYIEDDEDFNSDFVIVDRVVDL--IT 1114
Query: 307 NEDGSGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYP 366
+DG Q L+KW+ L Y+E TWE I E +E Q +KI +
Sbjct: 1115 EDDG----QEFVLIKWKSLGYEEVTWEPIEMIPADKVELWRERQVIDPAKIREK------ 1164
Query: 367 ANQRPK---FEKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQT 423
QRP+ ++K+ + G LR++Q G++W+ + + N ILADEMGLGKTVQT
Sbjct: 1165 --QRPEPEEWKKMSTSKVWKNGNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQT 1222
Query: 424 VSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEF 483
++F+S IY +GP LVVVPLST+ W F+ W +N + Y G+ +R+++Q YE
Sbjct: 1223 ITFLS-RIYDYGIHGPFLVVVPLSTIQNWVREFETWTD-MNAIVYHGSAYAREVLQQYEV 1280
Query: 484 YTNPQAKGKKH-----LKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLY 538
+ + + G K+ +K + L+TT+E ++ D L I W+ +DEAHRLKN L
Sbjct: 1281 FYDKRHCGAKNWKKNFVKIDALITTFETVVSDVEFLKKIPWRVCVIDEAHRLKNRNCKLL 1340
Query: 539 -ESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQ--DEQQEEYI 595
L +F++ +R+L+TGTPLQNNI EL +L+NFL P +F D F Q Q ++ +
Sbjct: 1341 VNGLLAFRMEHRVLLTGTPLQNNIDELFSLLNFLHPQQF--DNSATFLEQFGSCQTDDQV 1398
Query: 596 RDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKG 655
+ L + L+P +LRRLK+DVEKSL K E I+ V+LSD+Q ++Y+ IL +N+S L G
Sbjct: 1399 QKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILERNFSHLCKGTSA 1458
Query: 656 GHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENIL---RGLIMSSGXXXXX 712
SL+NVM EL+K NHP+L + AEE +++ F H + + LI +SG
Sbjct: 1459 P--SLMNVMMELRKCCNHPFLINGAEEAIMNDFRLAHPDWDEETLAHKALIQASGKVVLI 1516
Query: 713 XXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAE 772
DGH+VLIFSQMV++LD+L ++L F+R+DG V R+ +ID F+ E
Sbjct: 1517 EKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKE 1576
Query: 773 DSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFV 832
+S+ FVFLL TRAGGLGINL ADTVIIFDSDWNPQ DLQA AR HRIGQK V VYR +
Sbjct: 1577 NSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLI 1636
Query: 833 SKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGA-GNMF 891
+ +T E E+ ++A K+ L+ A+ L T K T S ++ E+LK GA G++
Sbjct: 1637 TSNTYEREMFDKASLKLGLDKAV--LQSTTALKAEGTAL---SKKDVEELLKKGAYGSIM 1691
Query: 892 KPNDNQQKLEDLNLDEVLNHAEDHITTPELGESNLGGEEFLR-QFEVTDYKA-DVDWDDI 949
+ K + +++ +L IT E+ G F + F + K D+D DD
Sbjct: 1692 DEENESSKFNEEDIETILQRRTQTITL----EAGQKGSLFAKATFNSSHNKGDDIDIDD- 1746
Query: 950 IPXXXXXXXXXXXQRRIDEEYVREQLDIMNRKTAAIDKIKRS----VNGETFGSD-SEDE 1004
+ ++D E D R+ + KR+ N + SD SE+
Sbjct: 1747 ----PEFWTKWAEKAQVDVEKATATPD--GRELIIEEPRKRTKRFEENKDEGDSDGSEES 1800
Query: 1005 GNSK-----SRKRSKANNLD------------AFGEREIRALYKCILRFGDIENKFEELI 1047
GN K RKR + N+ D A + E + K + ++G ++ E+
Sbjct: 1801 GNRKRGAAEKRKRRRGNDEDGDYSGSYRPDELATSKAEYFKVEKVLAQYG--WGRWAEIK 1858
Query: 1048 ADGSLPVKSIDRYKELYHEMITEAETLMRDEEAKRHEIFSKLEKDAAEYRQKIKNLEIKP 1107
G L + D + + ++ R ++ R +F+ + + QK+ +
Sbjct: 1859 KYGELEISEQD-IEHMSRTLLLHCIREFRGDDRIRQFVFNLIRPQGIQENQKLGAGSMYN 1917
Query: 1108 EDDAGKETPITLLSAKRREKRAILFEFHDTKALNADTLVNRRDNLKFLSNFV---ERNYK 1164
+ AG L A+ F +A+ L+ + D LK L + ER
Sbjct: 1918 QGWAG-------LPEFNPPSFALDSAFQRHVHRHANKLMVKIDMLKHLEIHLIGDERALV 1970
Query: 1165 DD-PLQFKFVNKNPKPVSAWNCV--WGKEDDEKLLIGIYKYGYGAWMQIRDDPFLGLTEK 1221
+D +++ + P + + W + D+ LIG +++G + IR D L EK
Sbjct: 1971 EDFNVKWTDIKLPEMPTISETFIEGWDSDCDKCFLIGCWRHGLDNFDAIRVDENLCFAEK 2030
>YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1120
Score = 439 bits (1130), Expect = e-122
Identities = 272/751 (36%), Positives = 425/751 (56%), Gaps = 82/751 (10%)
Query: 380 PSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGP 439
PSF+K G+LRD+Q+ G+NW+ L +GILADEMGLGKT+QT+SF+ +L Y ++ GP
Sbjct: 176 PSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGP 235
Query: 440 HLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASR-DLIQDYEFYTNPQAKGKKHLKFN 498
L++VP ST+ W+ F KW P +N + G++ +R D++++ +F+
Sbjct: 236 FLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIIL----------EARFD 285
Query: 499 VLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQ 558
VL+T+YE ++++++ L + WQ++ +DEAHR+KN +S+L + + F NRLLITGTPLQ
Sbjct: 286 VLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQ 345
Query: 559 NNIKELAALVNFLMPGRF----TIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDV 614
NN+ EL AL+NFL+P F D+ + N ++ QE I+ LH L PF+LRR+K DV
Sbjct: 346 NNLHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVKADV 405
Query: 615 EKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGI--KGGHVSLLNVMNELKKASN 672
EKSL K E + V ++D+Q ++YK++L K+ A+ + + G LLN++ +L+K N
Sbjct: 406 EKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCN 465
Query: 673 HPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQM 732
HPYLF+ AE G + + E+ LI +SG G RVLIFSQM
Sbjct: 466 HPYLFEGAEP------GPPYTTDEH----LIFNSGKMIILDKLLKRLKEKGSRVLIFSQM 515
Query: 733 VRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINL 792
R+LDIL DY + + R+DG+ +R +ID +N +S FVFLL+TRAGGLGINL
Sbjct: 516 SRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINL 575
Query: 793 MTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILE 852
+TADTVI+FDSDWNPQADLQAM RAHRIGQK V VYRFV+++ +EE+V+ERA +K+ L+
Sbjct: 576 VTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLD 635
Query: 853 YAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLNLDEVLNHA 912
+I G G K +S S +L ++++FGA NMF+ ++ + D ++D++L
Sbjct: 636 QLVIQQGT--GKKTASLGN---SKDDLLDMIQFGAKNMFEKKASKVTV-DADIDDILKKG 689
Query: 913 EDHITTPELGESNLGGEEFLRQFEVTDYKADVDWDDIIPXXXXXXXXXXXQRRIDEEYVR 972
E +LG ++ L++F + ++ +W+ Q++ +++ V
Sbjct: 690 EQKTQELNAKYQSLGLDD-LQKFNGIENQSAYEWN-----------GKSFQKKSNDKVV- 736
Query: 973 EQLDIMNRK------TAAIDKIKRSVNGETFGSDSEDEGNSKSRKRSKA----------N 1016
E ++ R+ T ++D + + G S S+ K+ + K
Sbjct: 737 EWINPSRRERRREQTTYSVDDYYKEIIGGGSKSASKQTPQPKAPRAPKVIHGQDFQFFPK 796
Query: 1017 NLDAFGEREIRALYKCILRF--------GDIENKFEE-----------LIADGSLPVKSI 1057
LDA E+E + +K + + GDI N+ + +G + +
Sbjct: 797 ELDALQEKE-QLYFKKKVNYKVTSYDITGDIRNEGSDAEEEEGEYKNAANTEGHKGHEEL 855
Query: 1058 DRYKELYHEMITEAETLMRDEEAKRHEIFSK 1088
R E E I A +++E ++ E+ SK
Sbjct: 856 KRRIEEEQEKINSAPDFTQEDELRKQELISK 886
>7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1027
Score = 429 bits (1104), Expect = e-119
Identities = 243/585 (41%), Positives = 343/585 (58%), Gaps = 44/585 (7%)
Query: 375 KLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYAR 434
+ DA P++IK GE+RD+Q+ G+NWM L+ NGILADEMGLGKT+QT+S + +L + +
Sbjct: 115 RFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFK 174
Query: 435 RQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKH 494
Q GPH+V+VP ST+ W F KW P L V +G+Q +R+ F + G+
Sbjct: 175 NQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNT-----FIRDVLMPGE-- 227
Query: 495 LKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITG 554
++V +T+YE ++++S W++L +DEAHR+KN +S L E L FK ANRLLITG
Sbjct: 228 --WDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITG 285
Query: 555 TPLQNNIKELAALVNFLMPGRFTIDQEIDF---ENQDEQQEEYIRDLHKRLQPFILRRLK 611
TPLQNN+ EL AL+NFL+P F ++ D N + I LH L+PF+LRRLK
Sbjct: 286 TPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALITRLHAVLKPFLLRRLK 345
Query: 612 KDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKAS 671
+VEK L K E + V LS +Q ++Y +L K+ + K + L N++ +L+K +
Sbjct: 346 AEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQLRKCT 405
Query: 672 NHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQ 731
NHPYLFD AE G + + + L+ +SG G RVLIFSQ
Sbjct: 406 NHPYLFDGAEP------GPPYTTDTH----LVYNSGKMAILDKLLPKLQEQGSRVLIFSQ 455
Query: 732 MVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGIN 791
M R+LDIL DY + N+ RLDG P R I FN ++S F+F+LSTRAGGLGIN
Sbjct: 456 MTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGIN 515
Query: 792 LMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMIL 851
L TAD VII+DSDWNPQ DLQAM RAHRIGQK V V+R +++ TVEE+++ERA K+ L
Sbjct: 516 LATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRL 575
Query: 852 EYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLNLDEVLNH 911
+ +I G ++ + N+ + E+ I++FGA +F + + + D ++D +L
Sbjct: 576 DKMVI-----QGGRLVDNRSNQLNKDEMLNIIRFGANQVF--SSKETDITDEDIDVILER 628
Query: 912 -----AEDHITTPELGESNL----------GGEEFLRQFEVTDYK 941
AE LGES+L G + QFE D++
Sbjct: 629 GEAKTAEQKAALDSLGESSLRTFTMDTNGEAGTSSVYQFEGEDWR 673
>At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1057
Score = 421 bits (1082), Expect = e-117
Identities = 313/1015 (30%), Positives = 500/1015 (48%), Gaps = 89/1015 (8%)
Query: 232 NSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRA---------------DPYTTREDI 276
+S E E +K+N + + +E + D EV A D Y ED
Sbjct: 12 SSEEEEERVKDNEEEDEEELEAVARSSGSDDDEVAAADESPVSDGEAAPVEDDYEDEEDE 71
Query: 277 EVMDLE--HERRIDEFEEFKVP--ERIIDSERFENE---DGSGSSQLKYLVKWRRLNYDE 329
E ++ + R+ E ++ K + +++S+ + + G +LKYL++ L
Sbjct: 72 EKAEISKREKARLKEMQKLKKQKIQEMLESQNASIDADMNNKGKGRLKYLLQQTELFAHF 131
Query: 330 CTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKF------EKLDAQPSFI 383
+ +S ++ + + R SKI + + +L QPS I
Sbjct: 132 AKSDGSSS------QKKAKGRGRHASKITEEEEDEEYLKEEEDGLTGSGNTRLLTQPSCI 185
Query: 384 KGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVV 443
+G ++RD+QL G+NW+ L+ NGILADEMGLGKT+QT+S +++L R NGPH+VV
Sbjct: 186 QG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 244
Query: 444 VPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTT 503
P ST+ W ++ P L V ++GN R I++ KF++ +T+
Sbjct: 245 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAG---------KFDICVTS 295
Query: 504 YEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKE 563
+E +K+++ L W+++ +DEAHR+KN S L +++ F RLLITGTPLQNN+ E
Sbjct: 296 FEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHE 355
Query: 564 LAALVNFLMPGRF----TIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLP 619
L AL+NFL+P F T D+ +++QQE ++ LHK L+PF+LRRLK DVEK LP
Sbjct: 356 LWALLNFLLPEIFSSAETFDEWFQISGENDQQE-VVQQLHKVLRPFLLRRLKSDVEKGLP 414
Query: 620 SKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDN 679
K E IL+V +S +Q +YYK +L K+ A+ +G G LLN+ +L+K NHPYLF
Sbjct: 415 PKKETILKVGMSQMQKQYYKALLQKDLEAVNAG--GERKRLLNIAMQLRKCCNHPYLFQG 472
Query: 680 AEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDIL 739
AE GD LI ++G RVLIFSQM R+LDIL
Sbjct: 473 AEPGPPYTTGDH----------LITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDIL 522
Query: 740 GDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVI 799
DYL +G + R+DG +R SI+ +N S FVFLLSTRAGGLGINL TAD VI
Sbjct: 523 EDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVI 582
Query: 800 IFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLG 859
++DSDWNPQ DLQA RAHRIGQK V V+RF ++ +EE+V+ERA KK+ L+ +I G
Sbjct: 583 LYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQG 642
Query: 860 VTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLNLDEVLNHAEDHITTP 919
+++ K + EL +++++GA +F D+ + D ++D ++ E+ T
Sbjct: 643 -----RLAEQKSKSVNKDELLQMVRYGAEMVFSSKDS--TITDEDIDRIIAKGEE--ATA 693
Query: 920 ELGESNLGGEEFLRQFEVTDYKADVDWDDIIPXXXXXXXXXXXQRRIDEEYVREQLDIMN 979
EL E QF++ D D+DD ++ RE+
Sbjct: 694 ELDAKMKKFTEDAIQFKMDDSADFYDFDDDNKDENKLDFKKIVSDNWNDPPKRER----K 749
Query: 980 RKTAAIDKIKRSVNGETFGSDSEDEGNSKSRKRSKANNLDAFGEREIRALYKCILRFGDI 1039
R + + K+++ E + + + ++ F + + LY+ +R+ +
Sbjct: 750 RNYSESEYFKQTLRQGAPAKPKE----PRIPRMPQLHDFQFFNIQRLTELYEKEVRY--L 803
Query: 1040 ENKFEELIADGSLPVKSIDRYKELYHEMITEAETLMRD--EEAKRHEIFSKLEKDAAEYR 1097
++ ++ V+ + L E + E E L+ + R + + L R
Sbjct: 804 MQTHQKNQLKDTIDVEEPEGGDPLTTEEVEEKEGLLEEGFSTWSRRDFNTFLRACEKYGR 863
Query: 1098 QKIKNLEIKPEDDAGKETPITLLSAKRREKRAILFEFHDTKALNADTLVNRRDN-LKFLS 1156
IK++ + E +E K R K ++ + ++R+D +K +
Sbjct: 864 NDIKSIASEMEGKTEEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIG 923
Query: 1157 NFVERNYKDDPLQFKFVNKNPKPVSAWNCVWGKEDDEKLLIGIYKYGYGAWMQIR 1211
++R Y++ L+ K K ++ +E D ++ I+K GYG W +++
Sbjct: 924 KKLDR-YRNPWLELKIQYGQNK-----GKLYNEECDRFMICMIHKLGYGNWDELK 972
>Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1054
Score = 421 bits (1081), Expect = e-117
Identities = 239/592 (40%), Positives = 356/592 (59%), Gaps = 51/592 (8%)
Query: 375 KLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYAR 434
+ + PS++KGG LRD+Q+ G+NW+ L+ NGILADEMGLGKT+QT++ + +L + R
Sbjct: 170 RFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYR 229
Query: 435 RQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKH 494
GPH+V+VP ST+ W F +W P L + ++G++ +R F + G+
Sbjct: 230 NIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAA-----FIRDEMMPGE-- 282
Query: 495 LKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITG 554
++V +T+YE ++K++S W++L +DEAHR+KN +S L E + FK NRLL+TG
Sbjct: 283 --WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTG 340
Query: 555 TPLQNNIKELAALVNFLMPGRFTIDQEID--FENQD-EQQEEYIRDLHKRLQPFILRRLK 611
TPLQNN+ EL AL+NFL+P F + D F+ ++ ++ + LH L+PF+LRR+K
Sbjct: 341 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIK 400
Query: 612 KDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKAS 671
DVEKSLP K E + + LS +Q E+Y IL K+ L S K + LLN++ +L+K
Sbjct: 401 TDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCC 460
Query: 672 NHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQ 731
NHPYLFD AE G + + E+I + +SG G RVLIFSQ
Sbjct: 461 NHPYLFDGAEP------GPPYTTDEHI----VSNSGKMVVLDKLLAKLKEQGSRVLIFSQ 510
Query: 732 MVRILDILGDYLSIKGINFQRLDGTVPSAQR------------RISIDHFNAEDSNDFVF 779
M R+LDIL DY +G + RLDG P +R R +I+ FNA +S+ F+F
Sbjct: 511 MTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIF 570
Query: 780 LLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEE 839
+LSTRAGGLGINL +AD VI++DSDWNPQ DLQAM RAHRIGQK V V+R ++ +TVEE
Sbjct: 571 MLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEE 630
Query: 840 EVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQK 899
++ERA K+ L+ +I G ++ + N+ + E+ ++++ GA ++F +++
Sbjct: 631 RIVERAEIKLRLDSIVIQQG-----RLIDQQSNKLAKEEMLQMIRHGATHVFASKESE-- 683
Query: 900 LEDLNLDEVLNH-----AEDHITTPELGESNLGG-----EEFLRQFEVTDYK 941
L D ++ +L AE + ++GES+L E+ L +FE DY+
Sbjct: 684 LTDEDITTILERGEKKTAEMNERLQKMGESSLRNFRMDIEQSLYKFEGEDYR 735
>CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 971
Score = 416 bits (1070), Expect = e-115
Identities = 243/583 (41%), Positives = 346/583 (58%), Gaps = 46/583 (7%)
Query: 377 DAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQ 436
D P +I+ GE+RD+Q+ G+NW+A L NGILADEMGLGKT+QT+S I ++ + + +
Sbjct: 83 DKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNK 142
Query: 437 NGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLK 496
PHLV+VP ST+ W F KW P +N V +G++A+R+ Q PQ K
Sbjct: 143 ASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARN--QVLRDVILPQ-------K 193
Query: 497 FNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTP 556
F+V TTYE +LK ++ L + W+++ +DEAHR+KN +S L E++ NRLLITGTP
Sbjct: 194 FDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTP 253
Query: 557 LQNNIKELAALVNFLMPGRFTIDQEID--FENQDEQ-QEEYIRDLHKRLQPFILRRLKKD 613
LQNN+ EL AL+NFL+P FT + D F N + ++ LHK LQPF+LRR+K D
Sbjct: 254 LQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGNTDLVQRLHKVLQPFLLRRIKSD 313
Query: 614 VEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNH 673
VEKSL K E + V LS +Q E+Y +L K+ + K L+N++ L+K NH
Sbjct: 314 VEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLMNILMHLRKCVNH 373
Query: 674 PYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMV 733
PYLFD AE G + ++ L+ +SG G RVLIFSQ
Sbjct: 374 PYLFDGAEP------GPPFTTDQH----LVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFS 423
Query: 734 RILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLM 793
R+LD+L D+ + + RLDG+ P R +I+ +NA DS F+F+L+TRAGGLGINL
Sbjct: 424 RMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLA 483
Query: 794 TADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEY 853
TAD VII+DSDWNPQ+DLQAM RAHRIGQK V V+R ++++TV+E ++E+A K+ L+
Sbjct: 484 TADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDN 543
Query: 854 AIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLNLDEVLNHAE 913
+I G ++S +K G++ +++ GA +F D+ + D ++D +L AE
Sbjct: 544 IVIQQG-----RMSEAQKT-LGKGDMISMIRHGAEQVFAAKDS--TISDDDIDTILEKAE 595
Query: 914 DHITTPELG-------ESNLGGEEF-------LRQFEVTDYKA 942
+ T EL E+NL F + QFE +YKA
Sbjct: 596 --VKTAELNEKMGKIDENNLRNMTFEDNAKFTVYQFEGENYKA 636
>Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1052
Score = 415 bits (1066), Expect = e-115
Identities = 236/580 (40%), Positives = 344/580 (58%), Gaps = 39/580 (6%)
Query: 375 KLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYAR 434
+ + PS++K G+LRD+Q+ G+NW+ L+ NGILADEMGLGKT+QT+S + ++ + R
Sbjct: 167 RFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYR 226
Query: 435 RQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKH 494
GPH+V+VP ST+ W F +W P L V +G++ R F + G+
Sbjct: 227 NIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAA-----FVRDVLLPGE-- 279
Query: 495 LKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITG 554
++V +T+YE ++K++S W++L +DEAHR+KN +S L E + FK NRLL+TG
Sbjct: 280 --WDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTG 337
Query: 555 TPLQNNIKELAALVNFLMPGRFTIDQEIDF---ENQDEQQEEYIRDLHKRLQPFILRRLK 611
TPLQNN+ EL +L+NFL+P F + D N ++ + LH L+PF+LRR+K
Sbjct: 338 TPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIK 397
Query: 612 KDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKAS 671
DVEKSLP K E + V LS +Q E+Y IL K+ L S K + LLN++ +L+K
Sbjct: 398 ADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCC 457
Query: 672 NHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQ 731
NHPYLFD AE G + + + L+ +SG G RVLIFSQ
Sbjct: 458 NHPYLFDGAEP------GPPYTTDMH----LVTNSGKMVVLDKLLPKLKEQGSRVLIFSQ 507
Query: 732 MVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGIN 791
M R+LDIL DY + + RLDG P +R+ SI+ +N +S FVF+LSTRAGGLGIN
Sbjct: 508 MTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGIN 567
Query: 792 LMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMIL 851
L TAD VI++DSDWNPQ DLQAM RAHRIGQ V V+RF++ +TVEE ++ERA K+ L
Sbjct: 568 LATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRL 627
Query: 852 EYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLNLDEVLNH 911
+ +I G ++ N+ E+ ++++ GA ++F +++ + D ++D +L
Sbjct: 628 DSIVIQQG-----RLVDQNLNKIGKDEMLQMIRHGATHVFASKESE--ITDEDIDGILER 680
Query: 912 -----AEDHITTPELGESNLGG-----EEFLRQFEVTDYK 941
AE + ++GES+L E + FE DY+
Sbjct: 681 GAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR 720
>At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1063
Score = 414 bits (1065), Expect = e-115
Identities = 260/701 (37%), Positives = 384/701 (54%), Gaps = 48/701 (6%)
Query: 262 DQEVRADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVK 321
D+E A D EV+ +E + DE +E K + R + +++ ++
Sbjct: 46 DEEDVAPDEAPVSDDEVVPVEDDAEEDEEDEEKAEISKREKARLKEMQKMKKQKIQQILD 105
Query: 322 WRRLNYD-ECTWEVASEIVKM--APEQVK-EFQNRTNSKIMPQNSSNYPANQRPKF---- 373
+ + D + E+ + K +P Q K + + R +SK+ + +
Sbjct: 106 SQNASIDADMQTELFAHFAKSDPSPSQKKGKGRGRHSSKLTEEEEDEECLKEEEGGIVGS 165
Query: 374 --EKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLI 431
+L QP+ I+G +LRD+QL G+NW+ L+ NGILADEMGLGKT+QT+S +++L
Sbjct: 166 GGTRLLTQPACIQG-KLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLH 224
Query: 432 YARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKG 491
R NGPH+VV P ST+ W ++ P L V ++GN R I++
Sbjct: 225 EYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAG----- 279
Query: 492 KKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLL 551
KF++ +T++E +K+++TL W+++ +DEAHR+KN S L +++ F RLL
Sbjct: 280 ----KFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL 335
Query: 552 ITGTPLQNNIKELAALVNFLMPGRF----TIDQEIDFENQDEQQEEYIRDLHKRLQPFIL 607
ITGTPLQNN+ EL AL+NFL+P F T D+ +++QQE ++ LHK L+PF+L
Sbjct: 336 ITGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQE-VVQQLHKVLRPFLL 394
Query: 608 RRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNEL 667
RRLK DVEK LP K E IL+V +S +Q +YYK +L K+ + G G LLN+ +L
Sbjct: 395 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGG--GERKRLLNIAMQL 452
Query: 668 KKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVL 727
+K NHPYLF AE GD L+ ++G RVL
Sbjct: 453 RKCCNHPYLFQGAEPGPPYTTGDH----------LVTNAGKMVLLDKLLPKLKDRDSRVL 502
Query: 728 IFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGG 787
IFSQM R+LDIL DYL +G + R+DG +R SI+ +N S FVFLLSTRAGG
Sbjct: 503 IFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGG 562
Query: 788 LGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARK 847
LGINL TAD VI++DSDWNPQ DLQA RAHRIGQK V V+RF +++ +E +V+ERA K
Sbjct: 563 LGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYK 622
Query: 848 KMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLNLDE 907
K+ L+ +I G ++ + EL +++++GA +F D+ + D ++D
Sbjct: 623 KLALDALVIQQG-------RLAEQKTVNKDELLQMVRYGAEMVFSSKDS--TITDEDIDR 673
Query: 908 VLNHAEDHITTPELGESNLGGEEFLRQFEVTDYKADVDWDD 948
++ E+ T EL E QF++ D D+DD
Sbjct: 674 IIAKGEE--ATAELDAKMKKFTEDAIQFKMDDSADFYDFDD 712
>YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1359
Score = 412 bits (1058), Expect = e-114
Identities = 231/561 (41%), Positives = 334/561 (59%), Gaps = 46/561 (8%)
Query: 374 EKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYA 433
EK+D QPS + GG L+++QL G+ WM L++ + NGILADEMGLGKT+Q++S I++L
Sbjct: 456 EKIDKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEV 515
Query: 434 RRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKK 493
++ GP LV+VPLST+ W F+KWAP LN + Y G R +Q N
Sbjct: 516 KKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQIRVGN------- 568
Query: 494 HLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSF-KVANRLLI 552
F+VLLTTYEYI+KD+S L W + +DE HR+KNA+S L +++ + + NRL++
Sbjct: 569 ---FDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLIL 625
Query: 553 TGTPLQNNIKELAALVNFLMPGRFTIDQEID---------------FENQDEQQEEYIRD 597
TGTPLQNN+ EL AL+NF++P F + + E +E+ IR
Sbjct: 626 TGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRR 685
Query: 598 LHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGI---- 653
LHK L+PF+LRRLKK+VEK LP K E++++ +LS +Q + Y+ +L N + +G
Sbjct: 686 LHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGAT 745
Query: 654 KGGHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXX 713
KGG L N + +L+K NHP++FD E V G+ L +G
Sbjct: 746 KGGIKGLNNKIMQLRKICNHPFVFDEVEGVVNPSRGNSDL--------LFRVAGKFELLD 797
Query: 714 XXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAED 773
GHRVL+F QM +++DI+ D+L +K + + RLDG+ + +R ++ FNA D
Sbjct: 798 RVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPD 857
Query: 774 SNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVS 833
S+ F FLLSTRAGGLG+NL TADTVIIFD+DWNP DLQA RAHRIGQKN V + R ++
Sbjct: 858 SDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLIT 917
Query: 834 KDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKP 893
D+VEE +LERA +K+ ++ +I G D S+ ++ E L E +
Sbjct: 918 TDSVEEVILERAMQKLDIDGKVIQAGKFDNK--STAEEQEAFLRRLIE------SETNRD 969
Query: 894 NDNQQKLEDLNLDEVLNHAED 914
+D++ +L+D L++ L + D
Sbjct: 970 DDDKAELDDDELNDTLARSAD 990
>YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1129
Score = 411 bits (1057), Expect = e-114
Identities = 245/602 (40%), Positives = 354/602 (58%), Gaps = 59/602 (9%)
Query: 380 PSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGP 439
P+++ G +LR +Q+ G+NW+ L GILADEMGLGKT+QT+SF+ +L Y + GP
Sbjct: 189 PAYVNG-QLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGP 247
Query: 440 HLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASR-DLIQDYEFYTNPQAKGKKHL--K 496
LV+ P ST+ W ++W P +N G++ R +LIQ KK L
Sbjct: 248 FLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQ------------KKLLGCD 295
Query: 497 FNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTP 556
F+V++ +YE I++++S L I W+++ +DEAHR+KN ES L + L F NRLLITGTP
Sbjct: 296 FDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTP 355
Query: 557 LQNNIKELAALVNFLMPGRFTIDQEID----FENQDEQQEEYIRDLHKRLQPFILRRLKK 612
LQNN+ EL AL+NFL+P F+ Q+ D E+ +E Q++ ++ LH LQPF+LRR+K
Sbjct: 356 LQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKS 415
Query: 613 DVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL--TSGIKGGHVSLLNVMNELKKA 670
DVE SL K E L V +S +Q ++YK IL K+ A+ ++G K LLN+M +L+K
Sbjct: 416 DVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKC 475
Query: 671 SNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFS 730
NHPYLFD AE G + + E+ L+ ++ +G RVLIFS
Sbjct: 476 CNHPYLFDGAEP------GPPYTTDEH----LVYNAAKLQVLDKLLKKLKEEGSRVLIFS 525
Query: 731 QMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGI 790
QM R+LDIL DY + + R+DG+ R +ID +NA DS FVFLL+TRAGGLGI
Sbjct: 526 QMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGI 585
Query: 791 NLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMI 850
NL +AD V+++DSDWNPQADLQAM RAHRIGQK V V+R V+ ++VEE++LERA +K+
Sbjct: 586 NLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLR 645
Query: 851 LEYAIISLGVTDGNKISSTKKNEPSAGE---LSEILKFGAGNMFKPNDNQ---------- 897
L+ +I T S KK E A L +++ GA ++FK +
Sbjct: 646 LDQLVIQQNRT------SLKKKENKADSKDALLSMIQHGAADVFKSGTSTGSAGTPEPGS 699
Query: 898 -QKLEDLNLDEVLNHAEDHITTPELGESNLGGEEFLR-------QFEVTDYKADVDWDDI 949
+K +D++LDE+L +E+ + LG ++ + ++ D+K + D I
Sbjct: 700 GEKGDDIDLDELLLKSENKTKSLNAKYETLGLDDLQKFNQDSAYEWNGQDFKKKIQRDII 759
Query: 950 IP 951
P
Sbjct: 760 SP 761
>7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1638
Score = 404 bits (1039), Expect = e-112
Identities = 271/792 (34%), Positives = 421/792 (52%), Gaps = 98/792 (12%)
Query: 374 EKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYA 433
EK+ Q S + G L+++Q+ G+ W+ L++ N NGILADEMGLGKT+QT+S +++L+
Sbjct: 759 EKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDR 818
Query: 434 RRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKK 493
++ GP+L++VPLST+P W F+KWAP + V Y G+ R L+Q+ T
Sbjct: 819 KKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQMRAT-------- 870
Query: 494 HLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVAN-RLLI 552
KFNVLLTTYEY++KD++ L I+W+++ +DE HR+KN L + LN+ +A RLL+
Sbjct: 871 --KFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLL 928
Query: 553 TGTPLQNNIKELAALVNFLMPGRF----TIDQEID---------FENQDEQQEEYIRDLH 599
TGTPLQN + EL AL+NFL+P F T +Q + E +E+ IR LH
Sbjct: 929 TGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 988
Query: 600 KRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGI------ 653
K L+PF+LRRLKK+VE LP K E I++ ++S +Q YK++ +K LT G
Sbjct: 989 KVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGV-LLTDGSEKGKHG 1047
Query: 654 KGGHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRG--LIMSSGXXXX 711
KGG +L+N + +L+K NHP++F + EE+ G GH ++ G L SG
Sbjct: 1048 KGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTG-GH----GVVSGPDLYRVSGKFEL 1102
Query: 712 XXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNA 771
HRVL+F QM + + I+ DYL + + RLDGT + R + FNA
Sbjct: 1103 LDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNA 1162
Query: 772 EDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRF 831
+ S+ FVFLLSTRAGGLG+NL TADTV+IFDSDWNP DLQA RAHRIGQ+N V V R
Sbjct: 1163 KGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRL 1222
Query: 832 VSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMF 891
++ ++VEE +L AR K+ ++ +I G+ D + S G SE +F +
Sbjct: 1223 MTVNSVEERILAAARYKLNMDEKVIQAGMFD----------QKSTG--SERQQFLQTILH 1270
Query: 892 KPNDNQQKLEDLNLDEVLN----HAEDHI---------TTPELGESNLGGEEFLRQFEVT 938
+ ++ +++ ++ DE++N +E+ I E E + G E + + E+
Sbjct: 1271 QDDNEEEEENEVPDDEMINMMIARSEEEIEIFKRMDAERKKEDEEIHPGRERLIDESELP 1330
Query: 939 DYKADVDWDDIIPXXXXXXXXXXXQRRIDEEYVREQLDIMNRKTAAIDKIKRSVNGETFG 998
D+ D D++ R + + D + K + +K +G F
Sbjct: 1331 DWLTKDD-DEVERFHYQYDEDTILGRGSRQRKEVDYTDSLTEK----EWLKAIDDGAEFD 1385
Query: 999 SDSEDEGNSKSR-----------------KRSKANNLDAFGEREIRALYKCILRFGD--- 1038
+ E++ + + R KR + NLD ++++ + +++
Sbjct: 1386 EEEEEDDSKRKRRKRKNRKEESDDDSLILKRRRRQNLDKRSKKQMHKIMSAVIKHNQDGR 1445
Query: 1039 -IENKFEELIADGSLPVKSIDRYKELYHEMITEAETLMRDEEAKRHEIFSKLEKDAAEYR 1097
+ F +L + LP Y E+ + + L R E+ K ++ ++LEKD +
Sbjct: 1446 TLSEPFMKLPSRQRLP-----DYYEIIKRPVDIKKILQRIEDCKYADL-NELEKD---FM 1496
Query: 1098 QKIKNLEIKPED 1109
Q +N +I E+
Sbjct: 1497 QLCQNAQIYNEE 1508
>ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1251
Score = 398 bits (1023), Expect = e-110
Identities = 265/777 (34%), Positives = 417/777 (53%), Gaps = 72/777 (9%)
Query: 221 LIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTREDIEVMD 280
+++ A +S +SY + E+G + L + ++ +++ + + + Y + + +
Sbjct: 134 VVRRASAPESESSSDSYNEESEDGIEKLLKYDSESERYFV---KFKHKSYLHCDWVPKSE 190
Query: 281 LEHER----RIDEFEEFKVPER--IIDSERFENEDGSGSSQLKYLVKWRRLNYDECTWEV 334
+ + ++ +F +VP + +R +ED G +LVKWR Y+ T+E
Sbjct: 191 IMASKVGAMKVKKFRATEVPFNPDFVKVDRILHEDYDGEKV--FLVKWRGQAYELSTFET 248
Query: 335 ASEIVKMA--PEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQ 392
A + K E++K++++R + M P R F K + P F G LR++Q
Sbjct: 249 AESVTKCEGFEEELKKYRDRKKIRNMRVGIDWRPP--RENFIKYEESPVFKGGNRLREYQ 306
Query: 393 LTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAW 452
L G+NW+ W + I+ADEMGLGKTVQ+V+FI+ L P LVV PLS +P W
Sbjct: 307 LEGLNWLLNRWYYKQSCIMADEMGLGKTVQSVTFINTLFTKYDYCAPVLVVTPLSIIPHW 366
Query: 453 QETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLK---FNVLLTTYEYILK 509
+ F+ W L + Y N+ R LI +YEF K +L+ F+VL+TTY+ ++
Sbjct: 367 EREFEAWTD-LRVLKYHENRPGRALIAEYEFVLK-----KNNLEIRLFDVLITTYDTVMA 420
Query: 510 DRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVN 569
++ L + DEAHRLKNA+S L + K +++L++GTPLQNNI EL +L+N
Sbjct: 421 EQEHLSQFHFSVGIFDEAHRLKNAKSKAATILRTLKFNHKVLLSGTPLQNNISELWSLLN 480
Query: 570 FLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVE 629
F+ P RF+ E + E + + L L+P +LRR+K+DVEKS+P+K E I+ V
Sbjct: 481 FIDPMRFSSLPHFLGEFKMENIND-VEKLQGLLRPLMLRRMKEDVEKSIPTKEETIIEVA 539
Query: 630 LSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEERVLSKF- 688
L+ +Q +Y+ IL KN LT G K +LLNVM EL+K HPYL AEE++LS +
Sbjct: 540 LTMIQKRFYRAILEKNIEFLTKGGKESAPNLLNVMMELRKCCIHPYLIKGAEEQILSGYL 599
Query: 689 ------------------------GDGHKSRENILRGL-------IMSSGXXXXXXXXXX 717
D H+ +++ + I SSG
Sbjct: 600 KKKRERSKAEGAENDITLTSEVLNEDEHQDGNSVISDIDEYYKIFIQSSG-KLVLLDKLL 658
Query: 718 XXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDF 777
DGH+VLIFSQM R LD+L +YL+ + ++R+DG + R+ +ID F+ + S+ F
Sbjct: 659 GKLKDGHKVLIFSQMTRCLDLLAEYLAYRKYKYERIDGGARTENRQAAIDRFSDKTSDVF 718
Query: 778 VFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTV 837
VFLLSTRAGG+GINL ADTVIIFDSDWNPQ DLQA AR HRIGQ + V VYR V+++T
Sbjct: 719 VFLLSTRAGGVGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTSEVKVYRLVTENTY 778
Query: 838 EEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPND-- 895
E E+ ++A K+ L+ A++ + K T+K + + +L+ GA + D
Sbjct: 779 EREMFDKAGLKLGLDRAVLQKMTFEEQKSEKTRKKD----AIETLLRKGAYGVLMETDDA 834
Query: 896 NQQKLEDLNLDEVLNHAEDHITTPELGESNLGGEEFLR-QFEVTDYKADVD-WDDII 950
+ +K + ++D++L ++ + + GG F + F+V + D D W++++
Sbjct: 835 SSRKFCEEDIDQILER------RTKIVKHSDGGNVFSKASFQVEEEIDDPDFWENLL 885
>CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1336
Score = 396 bits (1018), Expect = e-109
Identities = 241/606 (39%), Positives = 348/606 (56%), Gaps = 53/606 (8%)
Query: 324 RLNYDECTWE-VASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSF 382
R YD E I+ A E++N+T N +Y E++ Q
Sbjct: 302 RKEYDGVAEEDKVKSILDKARNDDDEYENKTK-----MNIEDYYTTAHGVREEIKEQHFM 356
Query: 383 IKGG----ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNG 438
+ GG +L+ +Q+ G+ WM L++ N NGILADEMGLGKT+QT++FI++L+ ++ +G
Sbjct: 357 MGGGNPSLKLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSG 416
Query: 439 PHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFN 498
P LV+VPLST+P WQ FDKWA ++ + Y G + +R + + K KFN
Sbjct: 417 PFLVIVPLSTVPNWQNEFDKWAANVHLIAYKGPKETRKVFEPII----------KSGKFN 466
Query: 499 VLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNS-FKVANRLLITGTPL 557
VLLTT+EY++++++ LG ++W+++ +DE HRLKN L E LN+ F+ RLLITGTPL
Sbjct: 467 VLLTTFEYVIREKALLGKLRWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLLITGTPL 526
Query: 558 QNNIKELAALVNFLMPGRF----TIDQEIDF------ENQDEQQEE---YIRDLHKRLQP 604
QN + EL AL+NFL+P F T +Q + E + QEE IR LHK L+P
Sbjct: 527 QNKLPELWALLNFLLPSIFSSCSTFEQWFNAPFATTGEKVELTQEETMLIIRRLHKVLRP 586
Query: 605 FILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVM 664
F+LRRLKK+VE LP K E ++R ++S +Q YK++ + L G SL N M
Sbjct: 587 FLLRRLKKEVESELPDKMEFVVRCDMSALQKVLYKHM--QKGLLLDGKTNTGSKSLRNTM 644
Query: 665 NELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGH 724
L+K NHP+LF+N EE + + S ++ R SG GH
Sbjct: 645 IHLRKLCNHPFLFENVEESCRNFWDARFISAVDLYR----VSGKLELLSRILPKLQATGH 700
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
RVL+F QM ++ I+ D+L+ I + RLDG+ +R +D FNA +S F+F+LSTR
Sbjct: 701 RVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTR 760
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLER 844
AGGLG+NL TADTVIIFDSDWNP D+QA RAHRIGQK V V+R ++ ++VEE++L
Sbjct: 761 AGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVEEKILAA 820
Query: 845 ARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLN 904
AR K+ ++ +I G D N + E EIL+ N+ K + ++ E++
Sbjct: 821 ARYKLNVDEKVIQAGKFD---------NRSTGAERREILE----NIIKTENESEEDEEVP 867
Query: 905 LDEVLN 910
DE +N
Sbjct: 868 NDEDIN 873
>Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1568
Score = 395 bits (1014), Expect = e-109
Identities = 245/621 (39%), Positives = 350/621 (55%), Gaps = 60/621 (9%)
Query: 273 REDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTW 332
R D E D ++E DE EE S R E E+ K L+ N +E +
Sbjct: 628 RSDSEESDSDYEEE-DEEEE---------SSRQETEE-------KILLD---PNSEEVSE 667
Query: 333 EVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQ 392
+ A +I++ A + V + + S + S +Y E+++ Q + + G L+ +Q
Sbjct: 668 KDAKQIIETAKQDVDDEYSMQYSA---RGSQSYYTVAHAISERVEKQSALLINGTLKHYQ 724
Query: 393 LTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAW 452
L G+ WM L++ N NGILADEMGLGKT+QT++ I++L+ +R NGP+L++VPLST+ W
Sbjct: 725 LQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNW 784
Query: 453 QETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRS 512
FDKWAP + + Y G A R + PQ + K FNVLLTTYEYI+KD+
Sbjct: 785 TYEFDKWAPSVVKISYKGTPAMRRSLV-------PQLRSGK---FNVLLTTYEYIIKDKH 834
Query: 513 TLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVA-NRLLITGTPLQNNIKELAALVNFL 571
L I+W+++ VDE HR+KN L + LN+ VA R+L+TGTPLQN + EL AL+NFL
Sbjct: 835 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFL 894
Query: 572 MPGRF----TIDQEIDF------ENQDEQQEE---YIRDLHKRLQPFILRRLKKDVEKSL 618
+P F T +Q + E D +EE IR LHK L+PF+LRRLKK+VE L
Sbjct: 895 LPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQL 954
Query: 619 PSKTERILRVELSDVQTEYYKNILTKNYSALTSGI------KGGHVSLLNVMNELKKASN 672
P K E +++ ++S +Q Y+++ K LT G KGG +L+N + +L+K N
Sbjct: 955 PEKVEYVIKCDMSALQKILYRHMQAKGI-LLTDGSEKDKKGKGGAKTLMNTIMQLRKICN 1013
Query: 673 HPYLFDNAEERVLSKFGDGHKSRENILRG--LIMSSGXXXXXXXXXXXXXXDGHRVLIFS 730
HPY+F + EE G + ++ G L +SG HRVL+F
Sbjct: 1014 HPYMFQHIEESFAEHLGYSN----GVINGAELYRASGKFELLDRILPKLRATNHRVLLFC 1069
Query: 731 QMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGI 790
QM ++ I+ DY + + + RLDGT S R + FN S F+FLLSTRAGGLG+
Sbjct: 1070 QMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGL 1129
Query: 791 NLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMI 850
NL ADTV+IFDSDWNP DLQA RAHRIGQ+N V V R + ++VEE++L A+ K+
Sbjct: 1130 NLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLN 1189
Query: 851 LEYAIISLGVTDGNKISSTKK 871
++ +I G+ D S ++
Sbjct: 1190 VDQKVIQAGMFDQKSSSHERR 1210
>Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1586
Score = 395 bits (1014), Expect = e-109
Identities = 245/621 (39%), Positives = 350/621 (55%), Gaps = 60/621 (9%)
Query: 273 REDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTW 332
R D E D ++E DE EE S R E E+ K L+ N +E +
Sbjct: 628 RSDSEESDSDYEEE-DEEEE---------SSRQETEE-------KILLD---PNSEEVSE 667
Query: 333 EVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQ 392
+ A +I++ A + V + + S + S +Y E+++ Q + + G L+ +Q
Sbjct: 668 KDAKQIIETAKQDVDDEYSMQYSA---RGSQSYYTVAHAISERVEKQSALLINGTLKHYQ 724
Query: 393 LTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAW 452
L G+ WM L++ N NGILADEMGLGKT+QT++ I++L+ +R NGP+L++VPLST+ W
Sbjct: 725 LQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNW 784
Query: 453 QETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRS 512
FDKWAP + + Y G A R + PQ + K FNVLLTTYEYI+KD+
Sbjct: 785 TYEFDKWAPSVVKISYKGTPAMRRSLV-------PQLRSGK---FNVLLTTYEYIIKDKH 834
Query: 513 TLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVA-NRLLITGTPLQNNIKELAALVNFL 571
L I+W+++ VDE HR+KN L + LN+ VA R+L+TGTPLQN + EL AL+NFL
Sbjct: 835 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFL 894
Query: 572 MPGRF----TIDQEIDF------ENQDEQQEE---YIRDLHKRLQPFILRRLKKDVEKSL 618
+P F T +Q + E D +EE IR LHK L+PF+LRRLKK+VE L
Sbjct: 895 LPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQL 954
Query: 619 PSKTERILRVELSDVQTEYYKNILTKNYSALTSGI------KGGHVSLLNVMNELKKASN 672
P K E +++ ++S +Q Y+++ K LT G KGG +L+N + +L+K N
Sbjct: 955 PEKVEYVIKCDMSALQKILYRHMQAKGI-LLTDGSEKDKKGKGGAKTLMNTIMQLRKICN 1013
Query: 673 HPYLFDNAEERVLSKFGDGHKSRENILRG--LIMSSGXXXXXXXXXXXXXXDGHRVLIFS 730
HPY+F + EE G + ++ G L +SG HRVL+F
Sbjct: 1014 HPYMFQHIEESFAEHLGYSN----GVINGAELYRASGKFELLDRILPKLRATNHRVLLFC 1069
Query: 731 QMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGI 790
QM ++ I+ DY + + + RLDGT S R + FN S F+FLLSTRAGGLG+
Sbjct: 1070 QMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGL 1129
Query: 791 NLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMI 850
NL ADTV+IFDSDWNP DLQA RAHRIGQ+N V V R + ++VEE++L A+ K+
Sbjct: 1130 NLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLN 1189
Query: 851 LEYAIISLGVTDGNKISSTKK 871
++ +I G+ D S ++
Sbjct: 1190 VDQKVIQAGMFDQKSSSHERR 1210
>Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1647
Score = 392 bits (1008), Expect = e-108
Identities = 226/539 (41%), Positives = 322/539 (58%), Gaps = 37/539 (6%)
Query: 355 SKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADE 414
S+ + + +Y A E++D Q + + G L+ +Q+ G+ W+ L++ N NGILADE
Sbjct: 721 SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE 780
Query: 415 MGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQAS 474
MGLGKT+QT++ I++L+ +R NGP L++VPLST+ W FDKWAP + V Y G+ A+
Sbjct: 781 MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA 840
Query: 475 RDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAE 534
R PQ + K FNVLLTTYEYI+KD+ L I+W+++ VDE HR+KN
Sbjct: 841 RRAFV-------PQLRSGK---FNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 890
Query: 535 SSLYESLNSFKVA-NRLLITGTPLQNNIKELAALVNFLMPGRF----TIDQEIDF----- 584
L + LN+ VA RLL+TGTPLQN + EL AL+NFL+P F T +Q +
Sbjct: 891 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 950
Query: 585 -ENQDEQQEE---YIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKN 640
E D +EE IR LHK L+PF+LRRLKK+VE LP K E +++ ++S +Q Y++
Sbjct: 951 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 1010
Query: 641 ILTKNYSALTSGI------KGGHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKS 694
+ K LT G KGG +L+N + +L+K NHPY+F + EE G
Sbjct: 1011 MQAKGV-LLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLG----F 1065
Query: 695 RENILRGLIM--SSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQR 752
I++GL + +SG H+VL+F QM ++ I+ DY + +G + R
Sbjct: 1066 TGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLR 1125
Query: 753 LDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQ 812
LDGT + R + + FN S F+FLLSTRAGGLG+NL +ADTVIIFDSDWNP DLQ
Sbjct: 1126 LDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQ 1185
Query: 813 AMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKK 871
A RAHRIGQ+N V V R + ++VEE++L A+ K+ ++ +I G+ D S ++
Sbjct: 1186 AQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERR 1244
>At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1132
Score = 392 bits (1008), Expect = e-108
Identities = 251/739 (33%), Positives = 385/739 (51%), Gaps = 88/739 (11%)
Query: 341 MAPEQ---VKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQLTGIN 397
+ P+Q + E N +S + + Y + EK+ QPS ++GGELR +QL G+
Sbjct: 383 LLPDQDIDITESDNNDDSNDLLEGQRQYNSAIHSIQEKVTEQPSLLEGGELRSYQLEGLQ 442
Query: 398 WMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFD 457
WM L++ N NGILADEMGLGKT+QT+S I++L+ + GP+L+V P + +P W F
Sbjct: 443 WMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAPKAVLPNWVNEFA 502
Query: 458 KWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSI 517
W P + Y G R I++ K KFNVL+T Y+ I++D++ L I
Sbjct: 503 TWVPSIAAFLYDGRLEERKAIRE---------KIAGEGKFNVLITHYDLIMRDKAFLKKI 553
Query: 518 KWQFLAVDEAHRLKNAESSLYESL-NSFKVANRLLITGTPLQNNIKELAALVNFLMPGRF 576
+W ++ VDE HRLKN ES+L ++L +++ RLL+TGTP+QN+++EL +L+NFL+P F
Sbjct: 554 EWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIF 613
Query: 577 TIDQEID------FENQ------DEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTER 624
Q + F ++ DE++ I LH ++PFILRR K +VEK LP KT+
Sbjct: 614 NSVQNFEEWFNAPFADRGNVSLTDEEELLIIHRLHHVIRPFILRRKKDEVEKFLPGKTQV 673
Query: 625 ILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEERV 684
IL+ ++S Q YYK + L +G G SL N+ +L+K NHPYLF + +
Sbjct: 674 ILKCDMSAWQKVYYKQVTDMGRVGLQTG-SGKSKSLQNLTMQLRKCCNHPYLFVGGDYNM 732
Query: 685 LSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLS 744
K ++ +SG GHR+L+FSQM R++D+L YL+
Sbjct: 733 WKK------------PEIVRASGKFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLT 780
Query: 745 IKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSD 804
+ + RLDGT + QR + + FN DS F+FLLSTRAGGLG+NL TADTVIIFDSD
Sbjct: 781 LNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSD 840
Query: 805 WNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGN 864
WNPQ D QA RAHRIGQK V V+ VS +VEE +LERA++KM ++ +I G+
Sbjct: 841 WNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQAGL---- 896
Query: 865 KISSTKKNEPSAGELSEILKFGAGN-----------------------MFKPNDNQQKLE 901
++T + L EI++ G + MF+ D +++ +
Sbjct: 897 -FNTTSTAQDRREMLEEIMRKGTSSLGTDVPSEREINRLAARSEDEFWMFERMDEERRRK 955
Query: 902 D------LNLDEVLNHA------EDHITTPELGESNLGGEEFLRQFEVTDYKADVDWDDI 949
+ + EV A E+ + + ++ G+ ++ +D +++ W
Sbjct: 956 ENYRARLMQEQEVPEWAYTTQTQEEKLNNGKFHFGSVTGKRKRKEIVYSDTLSELQWLKA 1015
Query: 950 IPXXXXXXXXXXXQRRIDEEYVREQLDIMNRKTAAIDKIKRSVNGETFGSDSEDE---GN 1006
+ ++ Y R + + N KT+ K+ S+ + G+ EDE
Sbjct: 1016 VESGEDLS-------KLSMRYNRREENASNTKTSTSKKVIESIQTVSDGTSEEDEEEQEE 1068
Query: 1007 SKSRKRSKANNLDAFGERE 1025
++++ S +D E E
Sbjct: 1069 ERAKEMSGKQRVDKSEEEE 1087
>CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1474
Score = 390 bits (1003), Expect = e-108
Identities = 261/802 (32%), Positives = 427/802 (52%), Gaps = 81/802 (10%)
Query: 340 KMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGE----LRDFQLTG 395
KM E+ + ++ + K Q + Y + K EK+ Q + + GG+ L+ +Q+ G
Sbjct: 482 KMILEKARNEEDEYDQKTKKQMADYYATAHKIK-EKVVKQHTTMGGGDPNLLLKPYQIKG 540
Query: 396 INWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQET 455
+ WM L++ N NGILADEMGLGKT+QT+S +++L+ ++ NGP+LV+VPLST+ WQ
Sbjct: 541 LEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLSTLSNWQNE 600
Query: 456 FDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLG 515
F KWAP + + Y G + +R ++ KG FNVL+TTYEY++K+++ LG
Sbjct: 601 FAKWAPSVTTIIYKGTKDARRRVE------GQIRKGA----FNVLMTTYEYVIKEKALLG 650
Query: 516 SIKWQFLAVDEAHRLKNAESSLYESLNSFKVA-NRLLITGTPLQNNIKELAALVNFLMPG 574
I+W+++ +DE HRLKN L LN F A +RLL+TGTPLQN + EL AL+NFL+P
Sbjct: 651 KIRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLPS 710
Query: 575 RF----TIDQEIDF------ENQDEQQEE---YIRDLHKRLQPFILRRLKKDVEKSLPSK 621
F T +Q + E + QEE IR LHK L+PF+LRRLKK+VE LP K
Sbjct: 711 IFSSCGTFEQWFNAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPDK 770
Query: 622 TERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAE 681
TE +++ + S +Q Y+++ + L + + G SL+N + L+K NHP+LF N E
Sbjct: 771 TEYVIKCDQSALQKVIYRHM--QKGLLLDAKMSSGARSLMNTVVHLRKLCNHPFLFPNIE 828
Query: 682 ERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGD 741
+ + + + +++R +G GHR+L+F QM +++I D
Sbjct: 829 DSCRAYWKVNEVNGTDLMR----VAGKLELLDRILPKLKATGHRILMFFQMTSMMNIFED 884
Query: 742 YLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIF 801
+L+ + + RLDG+ +R + FNA +S+ F+F+LSTRAGGLG+NL TADTVIIF
Sbjct: 885 FLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIF 944
Query: 802 DSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVT 861
DSDWNP D+QA RAHRIGQK V V R ++ ++VEE++L AR K+ ++ +I G
Sbjct: 945 DSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGKF 1004
Query: 862 DGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLNLDEVLNHAEDHITTPEL 921
D + +K L +I++ + + ++ +D +++++ +E+ +
Sbjct: 1005 DQRSTGAERKQ-----MLEQIIQADG----EEEEEEEVPDDETVNQMVARSEEEFNIFQS 1055
Query: 922 GESNLGGEE---------FLRQFEVTD--YKADVDWDDI---IPXXXXXXXXXXXQRR-- 965
+ + EE L + E+ D K D++++ QRR
Sbjct: 1056 MDIDRRREEANQLHRKPRLLEEHEIPDDILKLSFDYEEMERAREEGREVVDQTPNQRRRR 1115
Query: 966 ----------IDEEYVREQLDIMNRKTAAIDKIKRSVNGETFGSDSEDEGNSKSRKRSKA 1015
DE+++++ ++ + A+ + K+ + G D D+ + K
Sbjct: 1116 REVDYSSDLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMAGLDENDDSMDDVVLQHKK 1175
Query: 1016 NNLDAFGEREIRALYKCILRFGDIENKFEELIADGSLPVKSIDRYKEL--YHEMIT---E 1070
D +I + IL + +N+ ELIAD +++ KEL Y+++I+ +
Sbjct: 1176 KKTDPELAEKINEMLDVILEY---KNEDGELIAD---VFQTLPTRKELPDYYQVISKPMD 1229
Query: 1071 AETLMRDEEAKRHEIFSKLEKD 1092
+ + + E R+ + +L D
Sbjct: 1230 FDRINKKIETGRYTVMEELNDD 1251
>SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1199
Score = 389 bits (999), Expect = e-107
Identities = 226/561 (40%), Positives = 325/561 (57%), Gaps = 43/561 (7%)
Query: 374 EKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYA 433
E + QPS + GG+L+++QL G+ WM L++ + NGILADEMGLGKT+QT+S I+ LI
Sbjct: 403 EVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEK 462
Query: 434 RRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKK 493
+RQNGP LV+VPLST+ W F++WAP + + Y G R + +PQ +
Sbjct: 463 KRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKAL-------HPQVR--- 512
Query: 494 HLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVAN-RLLI 552
H F VLLTTYEYI+KDR L IKW ++ +DE HR+KN +S L +L ++ + RL++
Sbjct: 513 HSNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLIL 572
Query: 553 TGTPLQNNIKELAALVNFLMPGRFTIDQEID---------------FENQDEQQEEYIRD 597
TGTPLQNN+ EL AL+NF++P F + D E +E+ IR
Sbjct: 573 TGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRR 632
Query: 598 LHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKG-- 655
LHK L+PF+LRRLKKDVE LP K E+++R ++S +Q + Y + + +G
Sbjct: 633 LHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKT 692
Query: 656 GHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXX 715
G L N + +LKK NHP++F++ E R + G + + SG
Sbjct: 693 GIKGLQNTVMQLKKICNHPFVFEDVE-RSIDPTGFNYDMLWRV-------SGKFELLDRI 744
Query: 716 XXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSN 775
GHR+L+F QM +I++I+ DYL + + RLDG+ + R + FN +
Sbjct: 745 LPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAE 804
Query: 776 DFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKD 835
+FLLSTRAGGLG+NL TADTVIIFDSDWNP DLQA RAHRIGQ V +YR +++
Sbjct: 805 VNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEK 864
Query: 836 TVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPND 895
+VEE +L RA+ K+ ++ +I G D S+ ++ E L E N + ND
Sbjct: 865 SVEENILARAQYKLDIDGKVIQAGKFDNK--STPEEREAFLRSLLE-----NENGEEEND 917
Query: 896 NQQKLEDLNLDEVLNHAEDHI 916
+ +L+D L+E+L +D +
Sbjct: 918 EKGELDDDELNEILARGDDEL 938
>Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1033
Score = 388 bits (997), Expect = e-107
Identities = 229/592 (38%), Positives = 341/592 (56%), Gaps = 72/592 (12%)
Query: 375 KLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYAR 434
+ + PS++KGG LRD+Q+ G+NW+ L+ NGILADE+
Sbjct: 170 RFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEIP------------------ 211
Query: 435 RQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKH 494
GPH+V+VP ST+ W F +W P L + ++G++ +R F + G+
Sbjct: 212 ---GPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAA-----FIRDEMMPGE-- 261
Query: 495 LKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITG 554
++V +T+YE ++K++S W++L +DEAHR+KN +S L E + FK NRLL+TG
Sbjct: 262 --WDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTG 319
Query: 555 TPLQNNIKELAALVNFLMPGRFTIDQEID--FENQD-EQQEEYIRDLHKRLQPFILRRLK 611
TPLQNN+ EL AL+NFL+P F + D F+ ++ ++ + LH L+PF+LRR+K
Sbjct: 320 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIK 379
Query: 612 KDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKAS 671
DVEKSLP K E + + LS +Q E+Y IL K+ L S K + LLN++ +L+K
Sbjct: 380 TDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCC 439
Query: 672 NHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQ 731
NHPYLFD AE G + + E+I + +SG G RVLIFSQ
Sbjct: 440 NHPYLFDGAEP------GPPYTTDEHI----VSNSGKMVVLDKLLAKLKEQGSRVLIFSQ 489
Query: 732 MVRILDILGDYLSIKGINFQRLDGTVPSAQR------------RISIDHFNAEDSNDFVF 779
M R+LDIL DY +G + RLDG P +R R +I+ FNA +S+ F+F
Sbjct: 490 MTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIF 549
Query: 780 LLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEE 839
+LSTRAGGLGINL +AD VI++DSDWNPQ DLQAM RAHRIGQK V V+R ++ +TVEE
Sbjct: 550 MLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEE 609
Query: 840 EVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQK 899
++ERA K+ L+ +I G ++ + N+ + E+ ++++ GA ++F +++
Sbjct: 610 RIVERAEIKLRLDSIVIQQG-----RLIDQQSNKLAKEEMLQMIRHGATHVFASKESE-- 662
Query: 900 LEDLNLDEVLNH-----AEDHITTPELGESNLGG-----EEFLRQFEVTDYK 941
L D ++ +L AE + ++GES+L E+ L +FE DY+
Sbjct: 663 LTDEDITTILERGEKKTAEMNERLQKMGESSLRNFRMDIEQSLYKFEGEDYR 714
>At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1041
Score = 386 bits (991), Expect = e-106
Identities = 219/543 (40%), Positives = 327/543 (59%), Gaps = 41/543 (7%)
Query: 374 EKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYA 433
EK+ QPS ++GGELR +QL G+ WM L++ + NGILADEMGLGKT+QT++ I++L+ +
Sbjct: 349 EKVTKQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLES 408
Query: 434 RRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKK 493
+ +GPHL++ P + +P W+ F WAP ++ Y G++ R I+ + G K
Sbjct: 409 KDLHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIR-------ARIAGGK 461
Query: 494 HLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNS-FKVANRLLI 552
FNVL+T Y+ I++D++ L I W ++ VDE HRLKN E +L ++L + +++ RLL+
Sbjct: 462 ---FNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLL 518
Query: 553 TGTPLQNNIKELAALVNFLMPGRF-TIDQEIDFENQ-----------DEQQEEYIRDLHK 600
TGTP+QN+++EL +L+NFL+P F +I ++ N DE++ I LH
Sbjct: 519 TGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHH 578
Query: 601 RLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSL 660
++PF+LRR K +VEK LP KT+ IL+ ++S Q YYK + L SG G SL
Sbjct: 579 VIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSG-NGKSKSL 637
Query: 661 LNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXX 720
N+ +L+K NHPYLF A+ + K ++ +SG
Sbjct: 638 QNLTMQLRKCCNHPYLFVGADYNMCKK------------PEIVRASGKFELLDRLLPKLK 685
Query: 721 XDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFL 780
GHR+L+FSQM R++D+L YLS+ + RLDG+ + QR I + FN DS F+FL
Sbjct: 686 KAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFL 745
Query: 781 LSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEE 840
LSTRAGGLG+NL TADT+IIFDSDWNPQ D QA RAHRIGQK V V+ VS ++EE
Sbjct: 746 LSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEV 805
Query: 841 VLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKL 900
+LERA++KM ++ +I G+ ++T + L EI+ G ++ + +++++
Sbjct: 806 ILERAKQKMGIDAKVIQAGL-----FNTTSTAQDRREMLEEIMSKGTSSLGEDVPSEREI 860
Query: 901 EDL 903
L
Sbjct: 861 NRL 863
>YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1703
Score = 385 bits (990), Expect = e-106
Identities = 245/683 (35%), Positives = 380/683 (54%), Gaps = 59/683 (8%)
Query: 262 DQEVRADPYTTREDIEVMDLEHE----RRIDEFEEFKVPERIIDSERF-ENEDGSGSSQL 316
D++ RA+ +E ++ + E + +D+ ++ ++ + + F ++ + Q
Sbjct: 643 DEQKRAEK-KAKERLQALKANDEEAYIKLLDQTKDTRITHLLRQTNAFLDSLTRAVKDQQ 701
Query: 317 KYLVKWRRLNYDECTWEV--ASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFE 374
KY + + E + EV S + KM E+ + + +N Y R K E
Sbjct: 702 KYTKEMIDSHIKEASEEVDDLSMVPKMKDEEYDDDDDNSNVDY-------YNVAHRIK-E 753
Query: 375 KLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYAR 434
+ QPS + GG L+D+Q+ G+ WM L++ + NGILADEMGLGKT+QT+S +++L +
Sbjct: 754 DIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMK 813
Query: 435 RQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKH 494
GP+LV+VPLST+ W F KWAP L + + G+ R QAK +
Sbjct: 814 NIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKA---------KQAKIRAG 864
Query: 495 LKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVAN-RLLIT 553
+F+V+LTT+EYI+K+R+ L +KW + +DE HR+KNA+S L +LN+ A+ RL++T
Sbjct: 865 -EFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILT 923
Query: 554 GTPLQNNIKELAALVNFLMPGRFTIDQEID---------------FENQDEQQEEYIRDL 598
GTPLQNN+ EL AL+NF++P F + D E +E+ IR L
Sbjct: 924 GTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRL 983
Query: 599 HKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKG--- 655
HK L+PF+LRRLKKDVEK LP K E++++ ++S +Q Y+ +L Y L G +
Sbjct: 984 HKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQML--KYRRLFIGDQNNKK 1041
Query: 656 --GHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXX 713
G N + +LKK NHP++F+ E+++ ++ ++I R +G
Sbjct: 1042 MVGLRGFNNQIMQLKKICNHPFVFEEVEDQI----NPTRETNDDIWR----VAGKFELLD 1093
Query: 714 XXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAED 773
GHRVLIF QM +I+DI+ D+L I + RLDG S +R + FNA D
Sbjct: 1094 RILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPD 1153
Query: 774 SNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVS 833
S F+LSTRAGGLG+NL TADTVIIFD+DWNP DLQA RAHRIGQKN V + R ++
Sbjct: 1154 SEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLIT 1213
Query: 834 KDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKP 893
++VEE +LERA KK+ ++ +I G D S++++ E L + +
Sbjct: 1214 TNSVEEVILERAYKKLDIDGKVIQAGKFDNK--STSEEQEALLRSLLDAEEERRKKRESG 1271
Query: 894 NDNQQKLEDLNLDEVLNHAEDHI 916
+ +++L+D ++E+L ++ +
Sbjct: 1272 VEEEEELKDSEINEILARNDEEM 1294
>Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 897
Score = 376 bits (965), Expect = e-103
Identities = 243/665 (36%), Positives = 362/665 (53%), Gaps = 43/665 (6%)
Query: 372 KFEKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLI 431
+ ++ D + + G LR +QL G+NW+A + + IL DEMGLGKT QT++ +L
Sbjct: 30 RVQEQDLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLA 89
Query: 432 YARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKG 491
GP L++ PLS + W+E ++APGL+CV Y G++ R +Q
Sbjct: 90 GRLNDEGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQ---------DL 140
Query: 492 KKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLL 551
K+ +F+VLLTTYE LKD S L S W L VDEAHRLKN S L+++L+ F V LL
Sbjct: 141 KQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLL 200
Query: 552 ITGTPLQNNIKELAALVNFLMPGRFTIDQEIDF--ENQD-EQQEEYIRDLHKRLQPFILR 608
+TGTP+QN+++EL +L++F+ P F+ ++ DF QD E++ E +LHK LQPF+LR
Sbjct: 201 LTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKESESGNELHKLLQPFLLR 260
Query: 609 RLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELK 668
R+K +V LP KTE ++ +S +Q +YYK IL K+ A + V L N++++L+
Sbjct: 261 RVKAEVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENET-AKKVKLQNILSQLR 319
Query: 669 KASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLI 728
K +HPYLFD E + GD L +SG GHRVL+
Sbjct: 320 KCVDHPYLFDGVEPEPF-EVGDH----------LTEASGKLHLLDKLLAFLYSGGHRVLL 368
Query: 729 FSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGL 788
FSQM ++LDIL DY+ +G +++R+DG+V +R ++I +F + FVFLLSTRAGG+
Sbjct: 369 FSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPI--FVFLLSTRAGGV 426
Query: 789 GINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKK 848
G+NL ADTVI DSD+NPQ DLQA ARAHRIGQ V V R + +DTVEE V +A K
Sbjct: 427 GMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASK 486
Query: 849 MILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLNLDEV 908
+ L II G + + K + +LSEILKFG + + +++++L+ +
Sbjct: 487 LQLTNMIIEGG---HFTLGAQKPAADADLQLSEILKFGLDKLLASEGS--TMDEIDLESI 541
Query: 909 LNHAE------DHITTPELGESNL-GGEEFLRQFEVTDYKADVDWDDIIPXXXXXXXXXX 961
L + D + E G + G+ + FE DY + +D
Sbjct: 542 LGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKED----RKSFEQLVN 597
Query: 962 XQRRIDEEYVREQLDIMNRKTAAI-DKIKRSVNGETFGSDSEDEGNSKSRKRSKANNLDA 1020
Q+ + E+ +E + N+ + I ++ S + S E E K R+ + A
Sbjct: 598 LQKTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRL 657
Query: 1021 FGERE 1025
E++
Sbjct: 658 IEEKK 662
>At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1339
Score = 364 bits (935), Expect = e-100
Identities = 236/683 (34%), Positives = 346/683 (50%), Gaps = 72/683 (10%)
Query: 235 ESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTT--REDIEVMDLE----HERRID 288
E EDL + + LK Y K+F + + + RE I ++ + + R +
Sbjct: 618 EKLEDLFKVRRERLKGFNRYAKEFHKRKERLHREKIDKIQREKINLLKINDVEGYLRMVQ 677
Query: 289 EFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPEQVKE 348
+ + +V + + ++E++ + GS + K L DE A++ + + +
Sbjct: 678 DAKSDRVKQLLKETEKYLQKLGSKLKEAKLLTSRFENEADETRTSNATDDETLIENEDES 737
Query: 349 FQNRTNS---------KIMPQNSSNYPANQRPKF-------EKLDAQPSFIKGGELRDFQ 392
Q + + +M +Y + + E ++ QPS + GG+LR++Q
Sbjct: 738 DQAKASYISAFFHLFLMVMIHTIQHYLESNEKYYLMAHSIKENINEQPSSLVGGKLREYQ 797
Query: 393 LTGINWMAFLWSKNDNGILADEMGLGKTVQ--------TVSFISWLIYARRQNGPHLVVV 444
+ G+ W+ L++ + NGILADEMGLGKTVQ +S I +L+ + GP LVVV
Sbjct: 798 MNGLRWLVSLYNNHLNGILADEMGLGKTVQMGLGKTVQVISLICYLMETKNDRGPFLVVV 857
Query: 445 PLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTY 504
P S +P WQ + WAP ++ + Y G R + + H KFNVLLTTY
Sbjct: 858 PSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIV---------HQKFNVLLTTY 908
Query: 505 EYILK--DRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIK 562
EY++ DR L I W ++ +DE HR+KNA L L + ++RLL+TGTPLQNN++
Sbjct: 909 EYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLE 968
Query: 563 ELAALVNFLMPGRFTIDQEID------FENQDEQ-----QEE---YIRDLHKRLQPFILR 608
EL AL+NFL+P F ++ F++ E +EE I LH+ L+PF+LR
Sbjct: 969 ELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSALLSEEENLLIINRLHQVLRPFVLR 1028
Query: 609 RLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELK 668
RLK VE LP K ER++R E S Q K + S + + H S++ EL+
Sbjct: 1029 RLKHKVENELPEKIERLIRCEASAYQKLLMKRVEDNLGSIGNAKSRAVHNSVM----ELR 1084
Query: 669 KASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLI 728
NHPYL E E+ L ++ G HRVL
Sbjct: 1085 NICNHPYLSQLHSE-------------EHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLF 1131
Query: 729 FSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGL 788
FS M R+LD++ DYL++KG + RLDG R ID FN S F+FLLS RAGG+
Sbjct: 1132 FSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGV 1191
Query: 789 GINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKK 848
G+NL ADTVI+FD+DWNPQ DLQA ARAHRIGQK V+V RF + ++VEE+V A K
Sbjct: 1192 GVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHK 1251
Query: 849 MILEYAIISLGVTDGNKISSTKK 871
+ + I+ G D N + +K
Sbjct: 1252 LGVANQSITAGFFDNNTSAEDRK 1274
>SPBP35G2.10 [R] KOG0383 Predicted helicase
Length = 1418
Score = 357 bits (917), Expect = 6e-98
Identities = 217/565 (38%), Positives = 326/565 (57%), Gaps = 35/565 (6%)
Query: 378 AQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQN 437
+QPSFIKGG L +QL G+NW+ W + ILADEMGLGKTVQ +SFIS L Y R +
Sbjct: 546 SQPSFIKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFY-RHKC 604
Query: 438 GPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKF 497
P LV+VP +T+ W+ KWAP L +G++ +R L++DY K KH+
Sbjct: 605 FPVLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLINQ---KDPKHVST 661
Query: 498 NVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPL 557
+VL+ + + ++ S L +W+ L VDE RLKN +SSL+ L+S K +LL+TGTPL
Sbjct: 662 HVLVISASNVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPL 721
Query: 558 QNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKS 617
QNN++EL L+ FL P + E++ + E + +LH+ L+PF LRR+K +V +
Sbjct: 722 QNNVRELFNLLQFLNPMKINA-AELE-KRYSIIDTEKVTELHQILKPFFLRRVKSEVLDN 779
Query: 618 LPSKTERILRVELSDVQTEYYKNILTKNYSAL-------TSGIKGGH--VSLLNVMNELK 668
P+K E I+ + ++ VQ YK+IL+KN S L + GG SL N++ +L+
Sbjct: 780 FPTKVEVIIPLSMTPVQKGLYKSILSKNLSLLRNITGYANTSSSGGQRTTSLNNILMQLR 839
Query: 669 KASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLI 728
K HPY++ E D + E +R L +S GHR+L+
Sbjct: 840 KTLAHPYIYSPDIE-------DRNLPYELAMRSLEEASCKFLILRLLVPKLITRGHRILL 892
Query: 729 FSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGL 788
FSQ ++ LDIL D+ K I + R DG +R+ +ID FNA +S FLLSTRAGG+
Sbjct: 893 FSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLSTRAGGV 952
Query: 789 GINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKK 848
GINL +ADTVII D D+NP D+QA+ARAHR GQK V+V+ ++D+VEE++++ A+KK
Sbjct: 953 GINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQNAQKK 1012
Query: 849 MILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQ--KLEDLNLD 906
++L++ I + S +N S +L IL+ GA +F+ ++ K + +++
Sbjct: 1013 LVLDHLI----------VESLDQNHNSEKDLESILRHGARALFEEAGDEPSIKYNEYSVE 1062
Query: 907 EVLNHAEDHITTPELGESNLGGEEF 931
+++ AE T ES++ +F
Sbjct: 1063 LLISEAEKQEDT-STDESDIKSNKF 1086
>ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 823
Score = 353 bits (907), Expect = 9e-97
Identities = 202/469 (43%), Positives = 285/469 (60%), Gaps = 26/469 (5%)
Query: 387 ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPL 446
ELRD+Q+ G+NW+ + + N ILADEMGLGKT+QT++F+ ++ Y +++ HL+++P
Sbjct: 52 ELRDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAFLGYIRYVKKERKRHLIILPK 111
Query: 447 STMPAWQETFDKWAPGLNC-VYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYE 505
ST+ W+ F K+ P V+Y + R +A+ +++ LTTYE
Sbjct: 112 STLANWRREFRKFMPNYKVRVFYSSRKEMRR-----------EAEEIMSSRWDACLTTYE 160
Query: 506 YILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELA 565
+ RS L ++KW ++ +DEAHR+KN S L + + F +RLLITGTPLQNN+ EL
Sbjct: 161 MCINARSILNTVKWSYIVIDEAHRIKNEHSLLSKIVRIFSCDHRLLITGTPLQNNVHELW 220
Query: 566 ALVNFLMPGRFTIDQEID--FENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTE 623
AL+NF++P F ++ + N DE E IR + LQ F LRR K DVE SLP K
Sbjct: 221 ALLNFIVPEIFNDAEKFESYVMNIDEGDGEAIRRIRSVLQLFFLRREKIDVEMSLPPKKI 280
Query: 624 RILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEER 683
L +LS +Q E+Y+ +L ++ S L S + L+NV+ +L+K NHPYLF +AE +
Sbjct: 281 VNLYSKLSPMQREWYRMLLKRDLSPLGS-TRDPKGMLMNVVMQLRKCCNHPYLFPDAEPK 339
Query: 684 VLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYL 743
+ D H +I +SG G RVLIFSQM +LDIL DY
Sbjct: 340 PYTN--DKH---------IIENSGKMIVLDKLLASLKAKGSRVLIFSQMSMMLDILEDYA 388
Query: 744 SIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDS 803
+ + R+DG+ R +ID FNAE S F+FLL+TRAGGLGINL TADTVI+FDS
Sbjct: 389 MFREYEYCRIDGSTSYRDRTEAIDGFNAEGSEKFLFLLTTRAGGLGINLSTADTVILFDS 448
Query: 804 DWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILE 852
DWNPQ DLQA RAHRIGQK V+V+R +S++TVEE ++ R+ +K+ L+
Sbjct: 449 DWNPQMDLQAQDRAHRIGQKKQVVVFRLISENTVEERIVYRSLQKLKLD 497
>At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 764
Score = 336 bits (861), Expect = 2e-91
Identities = 210/569 (36%), Positives = 311/569 (53%), Gaps = 65/569 (11%)
Query: 383 IKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLV 442
+ GG+L+ +QL G+ W+ LW NGILAD+MGLGKT+QT+ F+S L +GP+LV
Sbjct: 197 LTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHL-KGNGLDGPYLV 255
Query: 443 VVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLT 502
+ PLST+ W ++ P +N + Y G++ RD ++ P+ G K F +++T
Sbjct: 256 IAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHM---PKTVGPK---FPIVIT 309
Query: 503 TYEYILKD-RSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNI 561
+YE + D + L W+++ +DE HRLKN + L L K+ N+LL+TGTPLQNN+
Sbjct: 310 SYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNL 369
Query: 562 KELAALVNFLMPGRFTIDQEI----DF----------ENQDEQQEEYIRDLHKRLQPFIL 607
EL +L+NF++P FT E DF E +++++ + + LH L+PFIL
Sbjct: 370 SELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFIL 429
Query: 608 RRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTS-------GIKGGHVSL 660
RR+K DVE SLP K E I+ ++D Q ++ ++++ A G KG L
Sbjct: 430 RRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKG---KL 486
Query: 661 LNVMNELKKASNHP----------YLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXX 710
N++ +L+K NHP YL+ EE V G + +L L++
Sbjct: 487 NNLVIQLRKNCNHPDLLQGQIDGSYLYPPVEEIV------GQCGKFRLLERLLVR----- 535
Query: 711 XXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFN 770
+ H+VLIFSQ ++LDI+ Y S KG R+DG+V +RR I F+
Sbjct: 536 --------LFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFS 587
Query: 771 AEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYR 830
E S+ +FLLSTRAGGLGINL ADT I++DSDWNPQ DLQAM R HRIGQ V VYR
Sbjct: 588 DEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR 647
Query: 831 FVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNM 890
+ ++E VL+RA K+ LE+ +I G + S+ E ++ +LK
Sbjct: 648 LSTAQSIETRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEEE--DILALLK--EDET 703
Query: 891 FKPNDNQQKLEDLNLDEVLNHAEDHITTP 919
+ Q + D +LD +L+ ++ IT P
Sbjct: 704 AEDKLIQTDISDADLDRLLDRSDLTITAP 732
>Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 838
Score = 313 bits (802), Expect = 1e-84
Identities = 206/600 (34%), Positives = 307/600 (50%), Gaps = 73/600 (12%)
Query: 379 QPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNG 438
QP GG +R +Q+ G+ W+ LW NGILADEMGLGKTVQ ++ I+ +I R G
Sbjct: 214 QPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQ-RGVPG 272
Query: 439 PHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFN 498
P LV PLST+P W F ++ P + + Y G Q R + + K K L+ +
Sbjct: 273 PFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIY------KRKGTLQIH 326
Query: 499 -VLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPL 557
V++T++E ++DR+ L W++L VDE HR+KN + L L F N+LL+TGTPL
Sbjct: 327 PVVITSFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPL 386
Query: 558 QNNIKELAALVNFLMPGRF----TIDQEIDFENQDEQQEEYIRD---------LHKRLQP 604
QNN+ EL +L+NFL+P F + + D + E E+ I LH+ L P
Sbjct: 387 QNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQNVLHMLHQILTP 446
Query: 605 FILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLL--- 661
F+LRRLK DV +P K E ++ LS Q +Y I+ + + + + + L
Sbjct: 447 FLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPTG 506
Query: 662 NVMNELKKASNHPYL--FDNAEERVLSKF------------------GDGHKSRENIL-- 699
+K+ N+ + F N E+++S+ + + +NI+
Sbjct: 507 RPKRRTRKSINYSKIDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMML 566
Query: 700 -------------------------RGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVR 734
L+ +SG GH+VL+FSQM
Sbjct: 567 LRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTS 626
Query: 735 ILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMT 794
+LDIL DY ++ NF RLDG++ ++R ++ FN D F+FL+STRAGGLGINL
Sbjct: 627 MLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLGINLTA 685
Query: 795 ADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYA 854
ADTVII+DSDWNPQ+DLQA R HRIGQ V+VYR V+ +T++++++ERA K LE
Sbjct: 686 ADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKL 745
Query: 855 IISLGVTDGNKIS-STKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLNLDEVLNHAE 913
II G + + KN EL E+LK ++ + D +L+ +L+ ++
Sbjct: 746 IIHKNHFKGGQSGLNLSKNFLDPKELMELLKSRDYEREIKGSREKVISDKDLELLLDRSD 805
>At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 1245
Score = 309 bits (791), Expect = 3e-83
Identities = 186/480 (38%), Positives = 266/480 (54%), Gaps = 53/480 (11%)
Query: 379 QPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNG 438
QPS ++ G LRD+QL G+ WM L++ NGILADEMGLGKTVQ ++ I++L+ + G
Sbjct: 25 QPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYG 84
Query: 439 PHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFN 498
PHL++VP + + W+ W P ++C+YY+G + R + K KFN
Sbjct: 85 PHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQV----------KFEKFN 134
Query: 499 VLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQ 558
VL+TTYE+I+ DRS L + W+++ +DEA R+K+ ES L L+ ++ RLL+TGTPLQ
Sbjct: 135 VLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQ 194
Query: 559 NNIKELAALVNFLMPGRFT------------IDQEIDFEN------QDEQQEEYIRDLHK 600
N++KEL +L+N L+P F +E N + E++ I LH+
Sbjct: 195 NDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQ 254
Query: 601 RLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILT----------KNYSALT 650
L+PF+LRR +DVE SLP+K +LR +S +Q+ Y I + A
Sbjct: 255 ILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQK 314
Query: 651 SGIKGGHV--SLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGX 708
+ I + +L N EL+KA NHP L F D K L+ S G
Sbjct: 315 NPIYQAKIYRTLNNRCMELRKACNHPLLN-------YPYFNDFSKDF------LVRSCGK 361
Query: 709 XXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDH 768
GHRVL+FS M ++LDIL +YL + + ++R+DGT R +I
Sbjct: 362 LWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVD 421
Query: 769 FNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMV 828
FN D++ F+FLLS RA G G+NL TADTV+I+D D NP+ + QA+ARAHRIGQ V V
Sbjct: 422 FNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKV 481
>At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 861
Score = 308 bits (790), Expect = 3e-83
Identities = 203/575 (35%), Positives = 310/575 (53%), Gaps = 56/575 (9%)
Query: 388 LRDFQLTGINWMAFLWSKNDNGILA-DEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPL 446
L+ Q+ G++W+ + N +L D+MGLGKT+Q +SF+S+L + + GP LV+ PL
Sbjct: 51 LKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPL 110
Query: 447 STMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEY 506
S W +++ P L + Y+G++ R L Y + L F+VLLTTY+
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVGDKYCR-LDMRKSMYDHGH-----FLPFDVLLTTYDI 164
Query: 507 ILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESL-NSFKVANRLLITGTPLQNNIKELA 565
L D+ L I WQ+ +DEA RLKN S LY L F + RLLITGTP+QNN+ EL
Sbjct: 165 ALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELW 224
Query: 566 ALVNFLMPGRF-TIDQEIDFENQD------EQQEEYIRDLHKRLQPFILRRLKKDVEKS- 617
AL++F MP F T+DQ + + +E + L L F+LRR K + +S
Sbjct: 225 ALMHFCMPLVFGTLDQFLSAFKETGDGLDVSNDKETYKSLKFILGAFMLRRTKSLLIESG 284
Query: 618 ---LPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGG--HVSLLNVMNELKKASN 672
LP TE + V L +Q + Y +IL K L GG H SL N++ +L+KA +
Sbjct: 285 NLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACS 344
Query: 673 HPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQM 732
HPYLF E F +G L+ +SG GHRVL+FSQM
Sbjct: 345 HPYLFPGIEPE---PFEEGEH--------LVQASGKLLVLDQLLKRLHDSGHRVLLFSQM 393
Query: 733 VRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNA----------EDSNDFVFLLS 782
LDIL D++ ++ +++RLDG+V + +R +I +F+A + SN FVF++S
Sbjct: 394 TSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMIS 453
Query: 783 TRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVL 842
TRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV+ V++ +VEE +L
Sbjct: 454 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVIL 513
Query: 843 ERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLED 902
RA +K+ L + ++ + ++ E G+L ++ FG + ++ ++
Sbjct: 514 RRAERKLQLSHNVVG---------DNMEEKEEDGGDLRSLV-FGLQRFDPEEIHNEESDN 563
Query: 903 LNLDEVLNHAEDHITTPELGESNLGGEEFLRQFEV 937
L + E+ + AE + N+ ++ R+FE+
Sbjct: 564 LKMVEISSLAEKVVAI----RQNVEPDKEERRFEI 594
>YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 778
Score = 307 bits (787), Expect = 7e-83
Identities = 197/551 (35%), Positives = 283/551 (50%), Gaps = 78/551 (14%)
Query: 379 QPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNG 438
QP +K L+ +QL G+NW+ L+ NGILADEMGLGKTVQ+++ +++ IY G
Sbjct: 213 QPRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAF-IYEMDTKG 271
Query: 439 PHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFN 498
P LV PLST+ W F K+AP L + Y G ++ + + K+H
Sbjct: 272 PFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFF------KQHGGTG 325
Query: 499 VLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQ 558
+++T+YE IL+D + S W+FL VDE HRLKN L + L +NRLL+TGTPLQ
Sbjct: 326 IVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQ 385
Query: 559 NNIKELAALVNFLMPGRFT----IDQEIDFEN----------------QDEQQEEYIRDL 598
NN+ EL +L+NF+MP F ++ DF++ DE Q+ I +L
Sbjct: 386 NNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNL 445
Query: 599 HKRLQPFILRRLKKDV-EKSLPSKTERILRVELSDVQTEYYK------------NILTKN 645
H L+PF+LRRLKK V LP K E I+ ++ Q ++YK L K+
Sbjct: 446 HTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYKAGLNGKLKKTMFKELIKD 505
Query: 646 YSALTSGIKGGHVSLLNVMN--ELKKASNHPYLFDNAEERVLSKFGD----------GHK 693
+ L GHVS ++ + K + N DN L + +K
Sbjct: 506 FFTLNDEYI-GHVSNRSIRDFINYKLSGNETSNTDNKINPTLLQMDKLYKKNLQMEISNK 564
Query: 694 SRENI-------------------------LRGLIMSSGXXXXXXXXXXXXXXDGHRVLI 728
+N+ L L+ +SG +GH+VLI
Sbjct: 565 KLQNMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEGHKVLI 624
Query: 729 FSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGL 788
+SQ V +LD++ D+ + R+DG+V + R+ ++ FN+ +FLLSTRA GL
Sbjct: 625 YSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGL 684
Query: 789 GINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKK 848
GINL+ ADTV++FDSDWNPQ DLQAM R HRIGQ++ V+VYR +T+E +L RA K
Sbjct: 685 GINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAANK 744
Query: 849 MILEYAIISLG 859
LE +I +G
Sbjct: 745 RNLERMVIQMG 755
>CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1038
Score = 288 bits (737), Expect = 5e-77
Identities = 258/905 (28%), Positives = 400/905 (43%), Gaps = 173/905 (19%)
Query: 35 DSDSDEEVIRPRRGKQKRKAVKQEHNYDXXXXXXXXIDDFSDTDDFGSKRKPTRAPSAKR 94
D D +EE R R+ K+K V NY +R+ + P +
Sbjct: 100 DDDYEEEGPRKRKAPSKKKLVYPRENY---------------------RREDSETPEPEM 138
Query: 95 GRKRVSAGNSKSKRQAKRVEESDEENV--VLPTRFSSRNNNKVINYTLNDDS-----NDE 147
R R + +S + K E + V+ T+ + R+ ++D+S NDE
Sbjct: 139 KRIRTLSDSSDDEWMTKPRLNGSESPIGNVMRTQMAKRSAASKRKIVIDDESEDDFINDE 198
Query: 148 DLME------SSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSIDIVVDHRLKEGVDNS 201
++ E S +E+ EG DSE ++ ++ S+ + KE +
Sbjct: 199 EISEKGSGKGSEKEESEGSGKDSETEEVT---------MKQGQSLKAAMAKAQKEQKKKA 249
Query: 202 GSTKNRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIIL 261
S ++ D D + A+ D++ +S K TK K ++ +
Sbjct: 250 ESDEDWEEDEDDMNAD-------GDETPSDDSDIEERRAKRGETKNQKECREFFNK---- 298
Query: 262 DQEVRADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVK 321
+ DL + RI++ K+ + ++ + FE G+ +++K + +
Sbjct: 299 --------------AKKEDLLQQARIND----KIADFVLANRPFEIY-GAMVAKMKGVTR 339
Query: 322 WRRLNYDECTWEVASEIVKMAPEQVKEFQNRTN--SKIMPQNSSNYPANQRPKFEKLDAQ 379
A E EF + S+I+ + ++ FE+
Sbjct: 340 GTN-----------------AIEAYMEFLEKRGILSRIL-DDCKDHAHTVTKDFERCTEG 381
Query: 380 PSFI----KGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARR 435
P + +G L D+QL G+ W+ +++K+ N IL DEMGLGKT+Q V+F+S+L +
Sbjct: 382 PLQLPLLKEGCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQIGK 441
Query: 436 QNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHL 495
GPHL+VVP ST+ W F KW P + + Y G+Q R ++ + K K H+
Sbjct: 442 -TGPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLR------HRVKKQKDHI 494
Query: 496 KFNVLLTTYEYILK---DRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLI 552
+V+LTTY + D+ + ++ DE H LKN +S Y L K ++L+
Sbjct: 495 --DVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILL 552
Query: 553 TGTPLQNNIKELAALVNFLMPGRFT---------------IDQEIDFENQDEQQEEYIRD 597
TGTPLQNN+ EL +L+ F++ F + +D +N+ Q++ I +
Sbjct: 553 TGTPLQNNLIELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEE 612
Query: 598 LHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGH 657
LQP+ILRRLK V SLPSK+E+I+ VE+ Q + Y NI+ + SG G
Sbjct: 613 AKAILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEALQQSEESGDSYGS 672
Query: 658 VSLLNVMNELKKASNHPYL-FDNAEERVLSKFGDGHKSREN------------------- 697
+ L++A+NHP L ++ L K RE
Sbjct: 673 ------LMRLRQAANHPLLRRSEYTDQKLDKIAKMLCLREKAYADKKWQHVSEDLAWLSD 726
Query: 698 -----------------ILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILG 740
+ L + SG G +VLIFSQ +LDIL
Sbjct: 727 IKIHQLCERFRCTSKFLLNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILE 786
Query: 741 DYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVII 800
YL+I+G +++RLDG P R+ I+ FN + FVFLLSTRAGGLGINL +A+ +II
Sbjct: 787 VYLNIRGYSYKRLDGQTPVLDRQEMINEFNL-SKDLFVFLLSTRAGGLGINLTSANHIII 845
Query: 801 FDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGV 860
D D+NP D QA R HR+GQ+ V V R VSK TVE +L A+KK+ LE V
Sbjct: 846 HDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQ-----V 900
Query: 861 TDGNK 865
TDG K
Sbjct: 901 TDGVK 905
>7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 844
Score = 281 bits (719), Expect = 6e-75
Identities = 189/534 (35%), Positives = 272/534 (50%), Gaps = 66/534 (12%)
Query: 379 QPSFIKGG-ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQN 437
QP + G +L D+Q+ G+NW+ + + NGILADEMGLGKT+Q ++F+++L
Sbjct: 279 QPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLSQ 338
Query: 438 GPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKF 497
HL+VVP ST+ W+ +W P L Y G+Q R ++ + G F
Sbjct: 339 AAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGR--FAKDGFTG-----F 391
Query: 498 NVLLTTYEYI---LKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITG 554
+VLLTTY + ++R K ++ DEAH LKN + Y +L + R+L+TG
Sbjct: 392 DVLLTTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTG 451
Query: 555 TPLQNNIKELAALVNFLMPGRFTIDQEI-------------DFENQDEQQEEYIRDLHKR 601
TPLQNN+ EL +L+ F+MP F E D + + QE I+ +
Sbjct: 452 TPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRI 511
Query: 602 LQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNIL---TKNYSALTSGIKGGHV 658
++PF+LRRLKKDV K+LP K + +V +S Q YY ++ + N + S + +
Sbjct: 512 MKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGEVCSSSERAGI 571
Query: 659 SLLNVMNELKKASNHPYL----FDNAEERVLSK----FGDGHKSRE-------------- 696
+ +M E+++ +NHP L F +A R SK K+ E
Sbjct: 572 A---IMMEMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKTNEQYIFEELAVMSDFQ 628
Query: 697 -------------NILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYL 743
I LI SG +GHRVL+FSQ +LDI+ +YL
Sbjct: 629 VYQMMNKHEFYDVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYL 688
Query: 744 SIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDS 803
I+ F RLDG R+ I FN +DS FVFLLST+AGG+GINL ADT +I D
Sbjct: 689 RIRKFGFCRLDGATAVNVRQDLITDFNGDDS-IFVFLLSTKAGGVGINLTAADTCVIHDI 747
Query: 804 DWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 857
D+NP D QA R HR+GQ+ V +YR +S+ T+EE +L A +K+ LE I S
Sbjct: 748 DFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDITS 801
>Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1026
Score = 276 bits (706), Expect = 2e-73
Identities = 186/524 (35%), Positives = 277/524 (52%), Gaps = 62/524 (11%)
Query: 379 QPSFIKGG-ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQN 437
QPS + L+ +Q G+NW+A + NGILADEMGLGKT+Q ++F+++L Y N
Sbjct: 487 QPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYL-YQEGNN 545
Query: 438 GPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKF 497
GPHL+VVP ST+ W + W P L + Y G+Q R I+ + ++ ++ +
Sbjct: 546 GPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR-FNIHS-------RYEDY 597
Query: 498 NVLLTTYEYILK---DRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITG 554
NV++TTY + DRS +K + DE H LKN S Y+ L + NRLL+TG
Sbjct: 598 NVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTG 657
Query: 555 TPLQNNIKELAALVNFLMPGRFTID-QEI------DFENQDEQ---QEEYIRDLHKRLQP 604
TP+QNN+ EL +L+NF+MP F+ EI ++ DEQ ++E I + ++P
Sbjct: 658 TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKP 717
Query: 605 FILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVM 664
FILRR+K++V K LP K +RI +S+ Q + Y + + ++ + K + + NVM
Sbjct: 718 FILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEK--NTEMCNVM 775
Query: 665 NELKKASNHPYL---FDNAEE--------------------------RVLSKF------- 688
+L+K +NHP L + AE+ V++ F
Sbjct: 776 MQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCK 835
Query: 689 GDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGI 748
H + + LI+ SG G RV++FSQ +LDIL L
Sbjct: 836 QYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQH 895
Query: 749 NFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQ 808
+ RLDG ++R ID FN D + FVFLLST+AGGLGINL +A+ VI+ D D NP
Sbjct: 896 RYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPY 954
Query: 809 ADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILE 852
D QA R HR+GQ V+V + +S+ T+EE +L+ ++K+ LE
Sbjct: 955 NDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLE 998
>At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 763
Score = 269 bits (688), Expect = 2e-71
Identities = 219/691 (31%), Positives = 324/691 (46%), Gaps = 105/691 (15%)
Query: 235 ESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTREDIEVMDLEHERRIDEFEEFK 294
E E+++E TK + R ++F+I D+E D D E E E +EF
Sbjct: 90 EDEEEVEE--TKVVMRAARVGRRFVIEDEEASDDD----------DDEAESSASE-DEFG 136
Query: 295 VPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPEQVKEFQNRTN 354
R E+ED G K L K +++ D + E+ + +
Sbjct: 137 GGGGGSGGRRGEDEDVVG----KALQKCAKISAD-----LRKELYGTSSGVTDRYSEVET 187
Query: 355 S--KIMPQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNG-IL 411
S +I+ QN + K E D QP L+ +QL G+N++ L+ K G IL
Sbjct: 188 STVRIVTQND----IDDACKAEDSDFQPI------LKPYQLVGVNFLLLLYKKGIEGAIL 237
Query: 412 ADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGN 471
ADEMGLGKT+Q +++++ L GPHLVV P S + W+ KW P + Y G
Sbjct: 238 ADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPASVLENWERELRKWCPSFTVLQYHG- 296
Query: 472 QASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTY-------EYILKDRSTLGSIKWQFLAV 524
A+R Y N +K K FNVLL Y E DR L +W + +
Sbjct: 297 -AAR---AAYSRELNSLSKAGKPPPFNVLLVCYSLFERHSEQQKDDRKVLKRWRWSCVLM 352
Query: 525 DEAHRLKNAESSLYESLNSF--KVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEI 582
DEAH LK+ S +++L S RL++TGTPLQN++ EL +L+ F++P FT +
Sbjct: 353 DEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLEFMLPDIFTTENVD 412
Query: 583 DFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNIL 642
+ + + E I + L PFILRRLK DV + L K +R+ V + Q + YK +
Sbjct: 413 LKKLLNAEDTELITRMKSILGPFILRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAI 472
Query: 643 ---------------TKNYSALTSGIKGGHVSLLNVMNELKKASNHPYL----------- 676
+K+ ++L + +S N + +K +NHP L
Sbjct: 473 EEYRAASQARLVKLSSKSLNSLAKALPKRQIS--NYFTQFRKIANHPLLIRRIYSDEDVI 530
Query: 677 -------------FDNAEERVLSK---FGD-----------GHKSRENILRGLIMSSGXX 709
F+ + +RV+ + F D + ++ + +M S
Sbjct: 531 RIARKLHPIGAFGFECSLDRVIEEVKGFNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKC 590
Query: 710 XXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHF 769
GHRVLIFSQ +LDIL L + G+ ++RLDG+ R+ +D F
Sbjct: 591 RTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTF 650
Query: 770 NAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVY 829
N D + F LLSTRAGG G+NL ADTVII D D+NPQ D QA R HRIGQ V ++
Sbjct: 651 N-NDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIF 709
Query: 830 RFVSKDTVEEEVLERARKKMILEYAIISLGV 860
R V+K TV+E + E A++K++L+ A++ GV
Sbjct: 710 RLVTKSTVDENIYEIAKRKLVLDAAVLESGV 740
>YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1085
Score = 261 bits (667), Expect = 6e-69
Identities = 234/818 (28%), Positives = 383/818 (46%), Gaps = 146/818 (17%)
Query: 188 IVVDHRLKEGVDNSGSTKNRRW--DVDSIRANFEFLIKWADQSHLHNSWESYEDLKENGT 245
I V L++ + N S R D+D I++ + L + DQ + G+
Sbjct: 82 ISVKQNLRDQIKNLQSDDIERVLKDIDDIQSRIKELKEQVDQG-----------AENKGS 130
Query: 246 K-GLKRIENYYKQFIILDQEVRADPYTTREDIEVMDLEH----ERRIDEFEEFKVPERII 300
K GL+R K+F+I ++ A + ++ + E+ E++ ++FE E+++
Sbjct: 131 KEGLQRPGETEKEFLIRTGKITAFGHKAGFSLDTANREYAKNDEQKDEDFE--MATEQMV 188
Query: 301 DSERFENEDGSGSSQLKYLVKWRRL-------NYDECTWEVASEIVKMAPEQVKE----- 348
E +ED + S Q Y + + N D+ E+ + P + K+
Sbjct: 189 --ENLTDEDDNLSDQ-DYQMSGKESEDDEEEENDDKILKELEDLRFRGQPGEAKDDGDEL 245
Query: 349 -FQNRTNSKIMP-----QNSSNYPANQRPKFEKLDAQ--PSFIKGGE----LRDFQLTGI 396
+Q R + Q SS+ P +RP DA+ F GE L ++Q T +
Sbjct: 246 YYQERLKKWVKQRSCGSQRSSDLPEWRRPHPNIPDAKLNSQFKIPGEIYSLLFNYQKTCV 305
Query: 397 NWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETF 456
W+ L+ +N GI+ DEMGLGKT+Q ++FI+ L ++ GP L+V P + M W F
Sbjct: 306 QWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTGPVLIVCPATVMKQWCNEF 365
Query: 457 DKWAPGLNCV--YYMGNQASRD------------LIQD-------YEFYTNPQAKGKKHL 495
W P L V + MG+ + D LI + YE + N + KK L
Sbjct: 366 QHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNSKPSDFSYEDWKN-STRTKKAL 424
Query: 496 KFN---------------VLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYES 540
+ + +L+TTY + L +KWQ+ +DE H+++N +S + +
Sbjct: 425 ESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIRNPDSEISLT 484
Query: 541 LNSFKVANRLLITGTPLQNNIKELAALVNFLMPGR----------FTIDQEID-FENQDE 589
K NR++++GTP+QNN+ EL +L +F+ PG+ F I I + N
Sbjct: 485 CKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGGYANATN 544
Query: 590 QQEEY-------IRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNIL 642
Q + +RDL + P++LRR+K DV K LP K E +L +L+ Q Y L
Sbjct: 545 IQVQTGYKCAVALRDL---ISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEFL 601
Query: 643 TKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKS-RENILRG 701
+S+ + I+ G ++L ++ L+K NHP L D +R +GD +S + +++
Sbjct: 602 ---HSSDLNQIQNGKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDPKRSGKMQVVKQ 658
Query: 702 LIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKG-----INFQRLDGT 756
L++ G++ L+F+Q ++LDIL +++S K +N+ R+DGT
Sbjct: 659 LLL-------------LWHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGT 705
Query: 757 VPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMAR 816
R+ +D FN E + VFLL+TR GGLG+NL A+ +IIFD DWNP D+QA R
Sbjct: 706 TNIKGRQSLVDRFNNESFD--VFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARER 763
Query: 817 AHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSA 876
A RIGQK V +YR + ++EE++ R K L I++ +K
Sbjct: 764 AWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILT---------DPKQKRFFKI 814
Query: 877 GELSEILKFGAGNMFKPNDNQQKLEDLNLDEVLNHAED 914
EL ++ G +N E+LN +EV H E+
Sbjct: 815 HELHDLFSLG-------GENGYSTEELN-EEVQKHTEN 844
>SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1284
Score = 256 bits (654), Expect = 2e-67
Identities = 190/555 (34%), Positives = 273/555 (48%), Gaps = 79/555 (14%)
Query: 371 PKFEKLDAQPSFIKGG-ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISW 429
PKF + QP + +L+ +QL G+NW+ L+ + +GILADEMGLGKT Q V+F +
Sbjct: 534 PKF--VTEQPKTLASDVQLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFA- 590
Query: 430 LIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQA 489
L+ + +GPHLVVVP ST+ W ++ P L Y G+Q R I++ A
Sbjct: 591 LLLEQGHHGPHLVVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANIRE--------A 642
Query: 490 KGKKHLKFNVLLTTYEYIL---KDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKV 546
+ +K+++L+TTY+ +DRS L + DE H LKN S Y+ L +
Sbjct: 643 IEENEIKYDILVTTYQLATNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMNLNA 702
Query: 547 ANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQ-------------EIDFENQDEQQEE 593
RLL+TGTPLQNN+KEL +L+ F++P F D + D E Q ++
Sbjct: 703 NFRLLLTGTPLQNNLKELVSLLAFILPNMFDSDMDDLDVIFKAKPTADADIE-QALLSKQ 761
Query: 594 YIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKN--ILTKNY----- 646
I + PF+LRR K V LP KT+ I +LS+ Q E Y L KN
Sbjct: 762 RISRAKTMMTPFVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAALQKNQQLRRD 821
Query: 647 ------SALTSGIKGGHVSLLNVMNELKKASNHPYLF----------------------D 678
S G +S +V+ +L+KA+NH LF
Sbjct: 822 DKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFRKFYDDEKLKQMAKDIMQEEQYK 881
Query: 679 NAEER-------VLSKFGDGHKSRE-------NILRGLIMSSGXXXXXXXXXXXXXXDGH 724
NA E+ V+S F R + M SG +G
Sbjct: 882 NANEQYIYEDMEVMSDFELHRLCRSFPTLQSYTLKDDPWMDSGKIRVLKELLPKMKEEGS 941
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
R+L+FSQ ++LDIL L I++ RLDG+ R+ ID F+ E+ + VFLLST+
Sbjct: 942 RILLFSQFTQMLDILEQVLDTLKISYVRLDGSTQVEVRQDIIDQFHKEE-DVTVFLLSTK 1000
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLER 844
AGG GINL A+ VI++D +NP DLQA RAHR+GQ V V R ++ +T+EE + +
Sbjct: 1001 AGGFGINLACANVVILYDCSYNPFDDLQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKL 1060
Query: 845 ARKKMILEYAIISLG 859
A K+ L+ ++ S G
Sbjct: 1061 ANTKLALDMSLSSDG 1075
>SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 944
Score = 253 bits (645), Expect = 2e-66
Identities = 187/547 (34%), Positives = 265/547 (48%), Gaps = 65/547 (11%)
Query: 373 FEKLDAQPSFIKGG-ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLI 431
+E QPS I G L+ +Q+ G+NW+ ++ +GILADEMGLGKT Q +SF++ L
Sbjct: 398 YEYNSQQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVISFLASLK 457
Query: 432 YARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKG 491
QN HLVVVP ST+ W F+K+ P L Y G Q+ R + Y T+
Sbjct: 458 EKGIQNR-HLVVVPSSTLGNWLREFEKFCPSLRVESYSGTQSERINKRYYLMDTD----- 511
Query: 492 KKHLKFNVLLTTYEYIL---KDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVAN 548
F+VL+TTY+ DRS L ++ DE H LKN S Y+ L +
Sbjct: 512 -----FDVLVTTYQLASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHLMNIPANF 566
Query: 549 RLLITGTPLQNNIKELAALVNFLMPGRF---------------TIDQEIDFENQDEQQEE 593
RLLITGTPLQNN+KEL +L+ F++P F T D +I+ + +E
Sbjct: 567 RLLITGTPLQNNLKELISLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDIE---RAYLSQE 623
Query: 594 YIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYY------KNILTKNYS 647
I + PFILRR K++V LP K + + + + Q Y KN++ N
Sbjct: 624 RISRAKTIMNPFILRRRKENVLSDLPPKIQHVEYCHMEETQLSLYLSVLELKNLVNANRE 683
Query: 648 ALTSGIKGG--HVSLLNVMNELKKAS---------------NHPYLFDNAE---ERVLSK 687
+ ++ H L L+ S N Y+F++ E + L K
Sbjct: 684 NILMQLRKAALHQLLFRSQYNLETLSLMSKRILREDAYLDANPQYIFEDMEVMSDFELHK 743
Query: 688 FGDGHKSRENI-LRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIK 746
D ++ L+G R+LIFSQ ++LDIL L+
Sbjct: 744 LADQYRHLHPFALKGKPWMDSAKVKKLCSLLKKSRPNERILIFSQFTQVLDILEYVLNTL 803
Query: 747 GINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWN 806
+ F RLDG+ P R+ ID F+ + N VFLLST++GG GINL A+ VI+FD +N
Sbjct: 804 DLEFLRLDGSTPVETRQQLIDDFHTNE-NYKVFLLSTKSGGFGINLTCANIVILFDCSFN 862
Query: 807 PQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKI 866
P D+QA RAHR+GQ V VYR ++K+T+EE + A K+ LE ++ TD KI
Sbjct: 863 PFDDMQAEDRAHRVGQTRPVHVYRLITKNTIEENIRRLANTKLTLESSL----TTDSEKI 918
Query: 867 SSTKKNE 873
E
Sbjct: 919 QKEISGE 925
>YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1867
Score = 251 bits (640), Expect = 8e-66
Identities = 167/524 (31%), Positives = 267/524 (50%), Gaps = 67/524 (12%)
Query: 388 LRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNG--------- 438
LR +Q G+NW+AFL + +GIL D+MGLGKT+QT+ I+ Y R+++
Sbjct: 1272 LRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKEDYEKTRSVESR 1331
Query: 439 --PHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLK 496
P L++ P S W+ FD++AP L V Y G R ++ PQ
Sbjct: 1332 ALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPTVRLTLR-------PQLSDA---- 1380
Query: 497 FNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTP 556
++++T+Y+ D + L ++ + +DE H +KN++S L +++ +RL++TGTP
Sbjct: 1381 -DIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTP 1439
Query: 557 LQNNIKELAALVNFLMPG----------RFT--IDQEIDFENQDEQQEEYI---RDLHKR 601
+QNN+ EL +L +FLMPG RF I + + ++QE + LHK+
Sbjct: 1440 IQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQ 1499
Query: 602 LQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVS-- 659
+ PF+LRRLK+DV LP K + EL D+Q + Y + K + + I+ ++
Sbjct: 1500 VLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIENSEIADG 1559
Query: 660 ---LLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKS------------RENILRGLIM 704
+ + ++K NHP L + L++ D K + + LR L+
Sbjct: 1560 KQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTGLDLHDIINAPKLSALRTLLF 1619
Query: 705 SSGXXXXXXXXXXXXXXD--------GHRVLIFSQMVRILDILGDYLSIK---GINFQRL 753
G + HR LIF Q+ +LD++ + L K + + RL
Sbjct: 1620 ECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKKYMPSVTYMRL 1679
Query: 754 DGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQA 813
DG++ R+ + FN + S D + LL+T+ GGLG+NL ADTVI + DWNP DLQA
Sbjct: 1680 DGSIDPRDRQKVVRKFNEDPSIDCL-LLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQA 1738
Query: 814 MARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 857
M RAHRIGQK V VYR ++K T+EE+++ + KM + +++
Sbjct: 1739 MDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVN 1782
>7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2237
Score = 250 bits (639), Expect = 1e-65
Identities = 161/516 (31%), Positives = 268/516 (51%), Gaps = 47/516 (9%)
Query: 91 SAKRGRKRVSAGNSKSKRQAKRVEESDEENVVLPTRFSSRNNNKVINYTLNDDSNDEDLM 150
S K + + K++ +K +EE D+ + VL + + +++ +ND+
Sbjct: 1746 SDKESKPEEQSETVKTEENSKAIEE-DKSSTVLTADHAKEPETVLEKMEVDEKANDD--- 1801
Query: 151 ESSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSIDIVVD-HRLKEGVDNSGSTKNRRW 209
+S+ + EG S++ D + ++ S++I + R+KEG ++ + +
Sbjct: 1802 QSAVSKAEG----SDEKSTDDSNPEEATTEKNKESLEIEGEKERVKEGEESVKKENDEKT 1857
Query: 210 DVDSIRANF-------EFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILD 262
+ D E+ +K+ + S+LH W + E+L KG +R+ ++F
Sbjct: 1858 EADMENKPEPVFIDVEEYFVKYRNFSYLHCEWRTEEEL----LKGDRRVAAKIRRF---- 1909
Query: 263 QEVRADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKW 322
Q+ ++ E+IE ++F +R++D ++ SG + YLVKW
Sbjct: 1910 QQKQSQQLNIFENIEDEPFN--------QDFTEVDRVLDMS-VHTDETSGETTKHYLVKW 1960
Query: 323 RRLNYDECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPK---FEKLDAQ 379
+ L Y++CTWE+ ++ EQ F +PQ S + + +RP ++KL+
Sbjct: 1961 KSLPYEDCTWELEEDVDNDKIEQYLRFNK------IPQRSE-WKSKKRPHPELWKKLEKT 2013
Query: 380 PSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGP 439
P + G LR +QL G+NW+ F W N ILADEMGLGKT+Q+++F+ +Y GP
Sbjct: 2014 PVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVH-SVYEYGIRGP 2072
Query: 440 HLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKG--KKHLKF 497
LV+ PLST+P WQ F+ W +N V Y G+ S+ +IQDYE+Y ++ K+ +KF
Sbjct: 2073 FLVIAPLSTIPNWQREFEGWTD-MNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKF 2131
Query: 498 NVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPL 557
NVL+TT+E I+ D L + W+ +DEAHRLKN L E L + +R+L++GTPL
Sbjct: 2132 NVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPL 2191
Query: 558 QNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEE 593
QNNI EL +L+NFL P +F+ +E E + EE
Sbjct: 2192 QNNISELFSLLNFLEPSQFSSQEEFMSEFGSLRTEE 2227
>YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1131
Score = 249 bits (636), Expect = 2e-65
Identities = 185/571 (32%), Positives = 278/571 (48%), Gaps = 84/571 (14%)
Query: 352 RTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGG-ELRDFQLTGINWMAFLWSKNDNGI 410
R N+ ++ S N ++P + +P + L+D+Q TGINW+ L+ + I
Sbjct: 538 RKNTHVISTTSRN---GRKPIVKFFKGKPRLLSPEISLKDYQQTGINWLNLLYQNKMSCI 594
Query: 411 LADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMG 470
LAD+MGLGKT Q +SF ++L + GPHLVVVP ST+ W F K+AP L Y G
Sbjct: 595 LADDMGLGKTCQVISFFAYLKQIN-EPGPHLVVVPSSTLENWLREFQKFAPALKIEPYYG 653
Query: 471 NQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIK---WQFLAVDEA 527
+ R+ ++D + K++V++TTY ++ + +K + + DE
Sbjct: 654 SLQEREELRDI--------LERNAGKYDVIVTTYNLAAGNKYDVSFLKNRNFNVVVYDEG 705
Query: 528 HRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQ 587
H LKN+ S + L + RLL+TGTPLQNN+KEL +L+ F+MP F I ++ F+
Sbjct: 706 HMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLKELMSLLEFIMPNLF-ISKKESFDAI 764
Query: 588 DEQQ---------------EEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSD 632
+Q+ +E I ++PFILRR K V K LP K I EL+
Sbjct: 765 FKQRAKTTDDNKNHNPLLAQEAITRAKTMMKPFILRRRKDQVLKHLPPKHTHIQYCELNA 824
Query: 633 VQTEYYK---NILTKNYSALTSG---------IKGGHVSLLNVMNELKKASNHPYLFDNA 680
+Q + Y I+ ++ + G K S N++ L+KAS HP LF N
Sbjct: 825 IQKKIYDKEIQIVLEHKRMIKDGELPKDAKEKSKLQSSSSKNLIMALRKASLHPLLFRNI 884
Query: 681 -EERVLSKFGDG----------------------------HK---------SRENILRGL 702
+++++K D HK S+ +
Sbjct: 885 YNDKIITKMSDAILDEPAYAENGNKEYIKEDMSYMTDFELHKLCCNFPNTLSKYQLHNDE 944
Query: 703 IMSSGXXXXXXXXXXXXXXD-GHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQ 761
M SG D +VLIFS ++LDIL LS F RLDG+
Sbjct: 945 WMQSGKIDALKKLLKTIIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVND 1004
Query: 762 RRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIG 821
R++ ID F ED + +F+LST+AGG GINL+ A+ VIIFD +NP D QA RAHR+G
Sbjct: 1005 RQLLIDKF-YEDKDIPIFILSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVG 1063
Query: 822 QKNHVMVYRFVSKDTVEEEVLERARKKMILE 852
Q V + ++KD++EE++ + A+ K+ L+
Sbjct: 1064 QTKEVNITTLITKDSIEEKIHQLAKNKLALD 1094
>SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 635
Score = 249 bits (635), Expect = 3e-65
Identities = 183/580 (31%), Positives = 289/580 (49%), Gaps = 88/580 (15%)
Query: 387 ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQ---------- 436
+LR +Q G+NW+AFL +GIL D+MGLGKT+QT+ ++ Y R++
Sbjct: 39 DLRKYQQEGVNWLAFLNKYELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEESGSPKF 98
Query: 437 -NGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHL 495
+ P L+V P + WQ+ +AP L Y+G A R I+ K
Sbjct: 99 AHVPSLIVCPSTLAGHWQQELSTYAPFLKVSAYVGPPAERAKIRS------------KMK 146
Query: 496 KFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGT 555
K +V++T+Y+ D L I W + +DE H +KNA + L +++ S + +RL+++GT
Sbjct: 147 KSDVVVTSYDICRNDVDELVKIDWNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGT 206
Query: 556 PLQNNIKELAALVNFLMPG----------RFT--IDQEIDFENQDEQQEE---YIRDLHK 600
P+QNN+ EL +L +FLMPG RF I D ++ +++E + +HK
Sbjct: 207 PIQNNVLELWSLFDFLMPGFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHK 266
Query: 601 RLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTK---------NYSALTS 651
++ PF+LRRLK+DV LP K + ++SD+Q + + +++ + + T
Sbjct: 267 QVLPFMLRRLKEDVLADLPPKIIQDYYCDMSDLQRKLLNDFVSQLNINEELEDDETEKTQ 326
Query: 652 GI---KGGHVSLLNVMNELKKASNHPYLF-------DNAEERVLSKFGDG-----HKSRE 696
G K + + ++K NHP L NA + L+K G H +
Sbjct: 327 GTRKKKSQKAHIFQALQYMRKLCNHPALILTEKHPKRNAIVKQLAKENSGLHDLKHAPKL 386
Query: 697 NILRGLIMSSGXXXXXXXX-----XXXXXXDGHRVLIFSQMVRILDILGDYL---SIKGI 748
L L+ G HRVLIF Q+ +LD++ L ++ +
Sbjct: 387 TALGQLLRDCGLGNSSVNSNGIDSALTNAVSEHRVLIFCQLKDMLDMVEKDLLQATMPDV 446
Query: 749 NFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQ 808
+ RLDG+V +R+ ++ FN + S D V LL+T GGLG+NL ADTVI + DWNP
Sbjct: 447 TYMRLDGSVEPTKRQEAVTKFNNDPSID-VLLLTTHVGGLGLNLTGADTVIFVEHDWNPM 505
Query: 809 ADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISS 868
DLQAM RAHRIGQK V VYR +++ +EE+++ R KM ++S
Sbjct: 506 RDLQAMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKM---------------NVAS 550
Query: 869 TKKNEPSAGELSEILKFGAGNMFKPN-DNQQKLEDLNLDE 907
T N+ +AG LS I ++F D QQ +++++ +E
Sbjct: 551 TVVNQQNAG-LSSIGTDQILDLFNTTADEQQTVQNIDKEE 589
>Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 336
Score = 246 bits (627), Expect = 3e-64
Identities = 140/335 (41%), Positives = 204/335 (60%), Gaps = 9/335 (2%)
Query: 415 MGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQAS 474
MGLGKT+Q+++F+ + I GP L++ PLST+ W+ F W +N V Y G+ S
Sbjct: 1 MGLGKTIQSITFL-YEILLTGIRGPFLIIAPLSTIANWEREFRTWTD-INVVVYHGSLIS 58
Query: 475 RDLIQDYEFYTNPQAKGK---KHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLK 531
R +IQ YE Y ++G+ +F ++TT+E IL L +I+W+ + +DEAHRLK
Sbjct: 59 RQMIQQYEMYFR-DSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLK 117
Query: 532 NAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQ 591
N L E L + +++L+TGTPLQN ++EL +L++FL P RF + E D +
Sbjct: 118 NKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLET 177
Query: 592 EEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTS 651
EE ++ L L+P +LRRLK+DVEK L K E I+ VEL+++Q +YY+ IL KN+S L+
Sbjct: 178 EEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSK 237
Query: 652 GIKGGHV-SLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHK--SRENILRGLIMSSGX 708
G +V +L+N M EL+K NHPYL AEE++L +F D + + + L+ +I S+G
Sbjct: 238 GAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGK 297
Query: 709 XXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYL 743
GH+VLIFSQMVR LDIL DYL
Sbjct: 298 LVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYL 332
>Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1493
Score = 245 bits (626), Expect = 3e-64
Identities = 153/499 (30%), Positives = 251/499 (49%), Gaps = 46/499 (9%)
Query: 387 ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQN--------- 437
+L +Q TG+ W+ L + GIL DEMGLGKT+Q ++F++ L Y++ +
Sbjct: 506 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEG 565
Query: 438 -GPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLK 496
GP ++V P + M W + F W P ++ + YT+ + K + +
Sbjct: 566 LGPTVIVCPTTVMHQWVKEFHTWWPPFRVA----------ILHETGSYTHKKEKLIRDVA 615
Query: 497 F--NVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITG 554
+L+T+Y YI + + W ++ +DE H+++N +++ + F+ +R++++G
Sbjct: 616 HCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSG 675
Query: 555 TPLQNNIKELAALVNFLMPGRF--------TIDQEIDFENQDEQQEEYIRDLHK------ 600
+P+QNN++EL +L +F+ PG+ I ++ +K
Sbjct: 676 SPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLR 735
Query: 601 -RLQPFILRRLKKDVEKSL--PSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGH 657
+ P++LRR+K DV+ SL P K E++L L+D Q + Y+N + S I G
Sbjct: 736 DTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVD---SKEVYRILNGE 792
Query: 658 VSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXX 717
+ + + + L+K NHP LF + L D + G SG
Sbjct: 793 MQIFSGLIALRKICNHPDLFSGGPKN-LKGLPDDELEEDQF--GYWKRSGKMIVVESLLK 849
Query: 718 XXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDF 777
G RVL+FSQ ++LDIL +L + + ++DGT A R+ I +N ED++ F
Sbjct: 850 IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYN-EDTSIF 908
Query: 778 VFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTV 837
VFLL+TR GGLG+NL A+ V+I+D DWNP D QA RA RIGQK V VYR ++ T+
Sbjct: 909 VFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTI 968
Query: 838 EEEVLERARKKMILEYAII 856
EE++ R K L ++
Sbjct: 969 EEKIYHRQIFKQFLTNRVL 987
>ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1256
Score = 245 bits (625), Expect = 4e-64
Identities = 161/485 (33%), Positives = 250/485 (51%), Gaps = 60/485 (12%)
Query: 387 ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPL 446
+LRD+Q+ G+ W+ FL+S + NGILAD+MGLGKT+Q ++F+ IY + N LV+ P
Sbjct: 796 KLRDYQMEGVKWLNFLYSFSLNGILADDMGLGKTLQVLTFLCSEIY--KTNRKVLVICPS 853
Query: 447 STMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEY 506
S W+ K+ P + Y + RD +++L+++YE
Sbjct: 854 SLTGHWKSEVKKFFPFVAAEIY--KREDRDT-------------------YSILISSYET 892
Query: 507 ILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAA 566
D W ++ VDE H L+N ++ LY +N + + ++++TGTP+ N++++L +
Sbjct: 893 FRNDYLNFIEKDWFYVVVDEGHVLRNKQTILYSRMNMIRCSRKMVLTGTPVHNSVEDLIS 952
Query: 567 LVNFLMPGRFTIDQEIDFEN------QDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPS 620
L NFLMP ++E N + E+ + + LH+++ PFILRRLK DV K LP
Sbjct: 953 LFNFLMPNYIGPEKEYGSLNVKMSDSEIEKTHKRLDLLHRKVLPFILRRLKIDVLKDLPP 1012
Query: 621 KTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNA 680
K R + VEL VQ + Y+ I KGG SL + E K F
Sbjct: 1013 KIIRDITVELGPVQEKLYREI----------DEKGGKESLGDAELEYGKVDQKNVGFKRT 1062
Query: 681 EERVLSKFGDGH-------KSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMV 733
+ L+ GH + L +I G G ++LIF Q
Sbjct: 1063 RDLFLAVSHIGHFKDSTEVSCKVKALEDIISLCGGEDL-----------GSKILIFFQFK 1111
Query: 734 RILD-ILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINL 792
+D ++ D + + RLDG+VPSA R + FN + + L+T+ GGLG+NL
Sbjct: 1112 STIDLVIKDIMKKYKFKYSRLDGSVPSAARTKIAEEFNTGTTQ--MLFLTTQVGGLGLNL 1169
Query: 793 MTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILE 852
ADTV++++ DWNP DLQAM RAHRIGQK V V+RF++++T+EE+V+ KM +
Sbjct: 1170 TGADTVVMYEHDWNPFNDLQAMDRAHRIGQKRTVNVFRFIARNTLEEKVMNLQSFKMFVA 1229
Query: 853 YAIIS 857
+++S
Sbjct: 1230 NSLVS 1234
>7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1861
Score = 242 bits (617), Expect = 4e-63
Identities = 164/520 (31%), Positives = 269/520 (51%), Gaps = 68/520 (13%)
Query: 387 ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQ----NGPHLV 442
ELR +Q GINW+ FL N +GIL D+MGLGKT+QT+ ++ R+ N P LV
Sbjct: 1287 ELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSLV 1346
Query: 443 VVPLSTMPAWQETFDKWAPG---LNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNV 499
+ P + W +K+ L ++Y G R+ + + K N+
Sbjct: 1347 ICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKL-----------RSDIGTKCNL 1395
Query: 500 LLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQN 559
++ +Y+ + KD I + + +DE H +KN ++ +++ K +RL+++GTP+QN
Sbjct: 1396 VVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQN 1455
Query: 560 NIKELAALVNFLMPGRFTIDQEI------------DFENQDEQQEEYI---RDLHKRLQP 604
N+ EL +L +FLMPG +++ D ++ ++QE + LH+++ P
Sbjct: 1456 NVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLP 1515
Query: 605 FILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNY-------------SALTS 651
F+LRR+K+DV K LP K + L ELS +Q Y++ K+ S +T
Sbjct: 1516 FLLRRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTE 1575
Query: 652 GIKGGHVSLLNVMNELKKASNHPYLFDNAEE---RVLSKFGDGHKSRENI--------LR 700
+ + + L+ NHP L E +V S+ + S ++I L+
Sbjct: 1576 NLSA-KTHIFQALRYLQNVCNHPKLVLRQSEELTKVTSQLALSNSSLDDIEHSAKLPALK 1634
Query: 701 GLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYL---SIKGINFQRLDGTV 757
L++ G HR LIF Q+ +LDI+ L + + + RLDG+V
Sbjct: 1635 QLLLDCGIGVQTESVSQ------HRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSV 1688
Query: 758 PSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARA 817
P++QR+ +++FN++ S D V LL+T GGLG+NL ADTVI + DWNP DLQAM RA
Sbjct: 1689 PASQRQDIVNNFNSDPSID-VLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRA 1747
Query: 818 HRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 857
HRIGQK V VYR ++++++EE+++ + K++ ++S
Sbjct: 1748 HRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVS 1787
>At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1187
Score = 239 bits (609), Expect = 3e-62
Identities = 157/512 (30%), Positives = 246/512 (47%), Gaps = 62/512 (12%)
Query: 387 ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPL 446
+L D+Q G+ W+ L + GI+ DEMGLGKT+Q +SF+ L +++ P +++ P+
Sbjct: 384 KLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLHFSKMYK-PSIIICPV 442
Query: 447 STMPAWQETFDKWAPGLNCVYY------------MGNQASRDLIQDYEFYTNPQAKGKKH 494
+ + W+ KW P + G + D + ++ + K K
Sbjct: 443 TLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDHEPKSKNT 502
Query: 495 LKFN------------VLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLN 542
K++ +L+TTYE + L +I+W + +DE HR++N S +
Sbjct: 503 KKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLVCK 562
Query: 543 SFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFE-----------NQDEQQ 591
+ +R+++TG P+QN + EL +L +F+ PG+ + + E N Q
Sbjct: 563 QLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQ 622
Query: 592 EE-------YIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTK 644
+RDL + P++LRR+K DV L KTE +L L+ Q Y+ L
Sbjct: 623 VSTAYRCAVVLRDL---IMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLA- 678
Query: 645 NYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIM 704
S+ I G+ + L ++ ++K NHP L + +G+ +S
Sbjct: 679 --SSEVEQIFDGNRNSLYGIDVMRKICNHPDLLEREHSHQNPDYGNPERS---------- 726
Query: 705 SSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRI 764
G GHRVL+FSQ ++LDIL +L +++R+DG P QR
Sbjct: 727 --GKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMA 784
Query: 765 SIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKN 824
ID FN + FVF+L+T+ GGLG NL A+ VIIFD DWNP D+QA RA RIGQK
Sbjct: 785 LIDEFNNSEDM-FVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKK 843
Query: 825 HVMVYRFVSKDTVEEEVLERARKKMILEYAII 856
V VYR +++ T+EE+V R K L I+
Sbjct: 844 DVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 875
>At4g31900 [R] KOG0383 Predicted helicase
Length = 1067
Score = 238 bits (607), Expect = 5e-62
Identities = 192/644 (29%), Positives = 313/644 (47%), Gaps = 89/644 (13%)
Query: 608 RRLKKDVEKS-LPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNE 666
+RLKKDV K +P K E ILRV++S Q E YK ++T NY LT K + NV+ +
Sbjct: 325 KRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLT---KKRDAKISNVLMK 381
Query: 667 LKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRV 726
L++ +HPYL + E R F D +++ +L +SG GHRV
Sbjct: 382 LRQVCSHPYLLPDFEPR----FEDANEAFTKLLE----ASGKLQLLDKMMVKLKEQGHRV 433
Query: 727 LIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAG 786
LI++Q L +L DY + K N++R+DG + +R++ ID FNAE+SN F FLLSTRAG
Sbjct: 434 LIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAG 493
Query: 787 GLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERAR 846
G+GINL TADTVII+DSDWNP ADLQAMAR HR+GQ N VM+YR + K TVEE ++E +
Sbjct: 494 GIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITK 553
Query: 847 KKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQ------KL 900
KM+LE+ ++ K EL +I+K+G+ +F +++
Sbjct: 554 NKMLLEHLVVG-------------KQHLCQDELDDIIKYGSKELFSEENDEAGRSGKIHY 600
Query: 901 EDLNLDEVLNHAEDHITTPELGESNLGGEEFLRQFEVTDYK-ADVDWDDIIPXXXXXXXX 959
+D ++++L+ +H+ E+ + +FL+ F+V ++ D + +
Sbjct: 601 DDAAIEQLLD--RNHVDAVEVSLDDEEETDFLKNFKVASFEYVDDENEAAALEEAQAIEN 658
Query: 960 XXXQRRID-----EEYVREQLDIMN-RKTAAIDKIKRS----------VNGETFGSDSED 1003
R D ++ ++++ ++ + +A+ K KR+ ++G SD ED
Sbjct: 659 NSSVRNADRTSHWKDLLKDKYEVQQAEELSALGKRKRNGKQVMYAEDDLDGLEEISDEED 718
Query: 1004 EG-----NSKSRKRSKANNLDAFGEREIRALYKCILRFGDIENKFEELIADGSLPVKSID 1058
E S + +A+ +A +R+ R + + R +N E + +G
Sbjct: 719 EYCLDDLKVTSDEEEEADEPEAARQRKPRTVTR-PYRKRARDNSEEIPLMEGE------G 771
Query: 1059 RYKELYHEMITEAETLMRDEEAKRHEIFSKLEKDAAEYRQKIKNLEIKPEDDAGKETPIT 1118
RY + TE + +R KR+ I +K++ P D++ IT
Sbjct: 772 RYLMVLGFNETERDIFLR--TFKRYGILF------------LKHIAENPTDNSTNFKVIT 817
Query: 1119 -LLSAKRREKRAILFEFHDTKALNADTLVNRRDNLKFLSNFVERNYKDDPLQFKFVNKNP 1177
++ A K I D ++ ++ ++ +FL N P F N
Sbjct: 818 AMVYADGVPKEGI---SSDELLVSMTFMMLVKEKCQFLDN--------HPTAPVFSNYVI 866
Query: 1178 KPVSAWNCVWGKEDDEKLLI-GIYKYGYGAWMQIRDDPFLGLTE 1220
+ N + KE+ +++LI + K+GYG W+ I +D +G E
Sbjct: 867 SKYNLRNGAFSKEEHDRILIPAVSKHGYGRWVAIVEDEEIGFQE 910
Score = 151 bits (381), Expect = 9e-36
Identities = 109/359 (30%), Positives = 175/359 (48%), Gaps = 46/359 (12%)
Query: 142 DDSNDEDLMESSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSIDIVVDHRLKEGVDNS 201
+D DE + E E+ G N D P E I+ ++D + N+
Sbjct: 20 EDKLDEYIREEQVEETGGSNQDC--------------PLGE---IEKILDREWRPTASNN 62
Query: 202 GSTKNRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIIL 261
++ + ++ ++L+KW S+LH SW ++ E YK L
Sbjct: 63 PNSSDN--GTPTLVVVKQYLVKWKGLSYLHCSWVPEQEF-----------EKAYKSHPHL 109
Query: 262 DQEVRADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVK 321
++R + D+ + + I E+K +RII E +DG +YLVK
Sbjct: 110 KLKLRVTRFNAAMDVFIAENGAHEFIAIRPEWKTVDRIIACR--EGDDGE-----EYLVK 162
Query: 322 WRRLNYDECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPS 381
++ L+Y WE S+I E ++ F++ +S + N R +F++ D P
Sbjct: 163 YKELSYRNSYWESESDISDFQNE-IQRFKDINSSSRRDKYVEN--ERNREEFKQFDLTPE 219
Query: 382 FIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHL 441
F+ G L +QL G+N++ + WSK N ILADEMGLGKT+Q+++F++ L PHL
Sbjct: 220 FLTG-TLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLF--EENLSPHL 276
Query: 442 VVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVL 500
VV PLST+ W+ F WAP +N V Y G+ +RD+I ++EFY ++G+K LK +VL
Sbjct: 277 VVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYF---SEGRKRLKKDVL 332
>SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 973
Score = 238 bits (606), Expect = 7e-62
Identities = 173/543 (31%), Positives = 271/543 (49%), Gaps = 74/543 (13%)
Query: 365 YPANQRPKFEKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTV 424
+P+ + FE P I+ R +Q+T + W+ L+ + GI+ DEMGLGKT+Q V
Sbjct: 255 HPSKKGQTFEGGFTIPGDIRPHLFR-YQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIV 313
Query: 425 SFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYY----MGNQASRDLIQD 480
SF+S L ++ + P L+V P + M W F W L V G +ASR+ Q
Sbjct: 314 SFLSSLHHSGKFQKPALIVCPATLMKQWVNEFHTWWAPLRVVVLHATGSGQRASREKRQY 373
Query: 481 YEFYTNPQAKGKK-----------------------HLKFNVLLTTYEYILKDRSTLGSI 517
+ +A+ K + ++L+TTY + +
Sbjct: 374 ESDASESEAEESKTSIKLRGASSSFHRYAKNLVESVFTRGHILITTYAGLRIYGDLILPR 433
Query: 518 KWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGR-- 575
+W + +DE H+++N +S + S + NR++++GTP+QNN+ EL L +F+ PGR
Sbjct: 434 EWGYCVLDEGHKIRNPDSEISISCKQIRTVNRIILSGTPIQNNLTELWNLFDFVFPGRLG 493
Query: 576 --------FTIDQEID-FENQDEQQEE-------YIRDLHKRLQPFILRRLKKDVEKSLP 619
F + I + N Q + +RDL + P++LRR+K DV LP
Sbjct: 494 TLPVFQNQFALPINIGGYANASNVQVQTAYKCACMLRDL---ISPYLLRRMKLDVAADLP 550
Query: 620 SKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDN 679
K+E++L +L+ +Q + Y++ L + I G +L ++ L+K NHP L
Sbjct: 551 KKSEQVLFCKLTPLQRKAYQDFLQ---GSDMQKILNGKRQMLYGIDILRKICNHPDLV-- 605
Query: 680 AEERVLSK----FGDGHKSRE-NILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVR 734
E +L K +GD KS + ++R L+ GHR L+FSQ +
Sbjct: 606 TREYLLHKEDYNYGDPEKSGKLKVIRALL-------------TLWKKQGHRTLLFSQTRQ 652
Query: 735 ILDILGDYLS-IKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLM 793
+LDIL L + +++ R+DG+ A R+ +D+FN + D VFLL+TR GGLG+NL
Sbjct: 653 MLDILEIGLKDLPDVHYCRMDGSTSIALRQDLVDNFNKNEYFD-VFLLTTRVGGLGVNLT 711
Query: 794 TADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEY 853
AD VI+FD DWNP D QA RA R+GQK V+VYR ++ T+EE++ R K L
Sbjct: 712 GADRVILFDPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQFLTN 771
Query: 854 AII 856
I+
Sbjct: 772 KIL 774
>Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1849
Score = 232 bits (592), Expect = 3e-60
Identities = 166/531 (31%), Positives = 265/531 (49%), Gaps = 75/531 (14%)
Query: 387 ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISW------LIYARRQNG-- 438
ELR +Q G+NW+AFL +GIL D+MGLGKT+Q++ ++ YAR +
Sbjct: 1265 ELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAEC 1324
Query: 439 ---PHLVVVPLSTMPAWQETFDKWAPG--LNCVYYMGNQASRDLIQDYEFYTNPQAKGKK 493
P LVV P + W + K+ LN ++Y G R +Q + K+
Sbjct: 1325 MPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQH---------QVKR 1375
Query: 494 HLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLIT 553
H N+++ +Y+ + D +IK+ + +DE H +KN ++ L +++ R++++
Sbjct: 1376 H---NLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILS 1432
Query: 554 GTPLQNNIKELAALVNFLMPGRFTIDQEI------------DFENQDEQQEEYIRD---L 598
GTP+QNN+ EL +L +FLMPG +++ D + +QE + L
Sbjct: 1433 GTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDAL 1492
Query: 599 HKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNIL----------TKNYSA 648
H+++ PF+LRR+K+DV + LP K + LS +Q + Y++ T + +
Sbjct: 1493 HRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSAT 1552
Query: 649 LTSGIKG------GHVSLLNVMNELKKASNHPYL--------FDNAEERVL----SKFGD 690
L+ + GHV + L+K NHP L F E++ S
Sbjct: 1553 LSEETEKPKLKATGHV--FQALQYLRKLCNHPALVLTPQHPEFKTTAEKLAVQNSSLHDI 1610
Query: 691 GHKSRENILRGLIMSSGXXXXXXXXXXXXXXDG-HRVLIFSQMVRILDILGDYL---SIK 746
H + + L+ L++ G HR+LIF Q+ +LDI+ L +
Sbjct: 1611 QHAPKLSALKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLP 1670
Query: 747 GINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWN 806
+ + RLDG++P QR + FN + S D V LL+T GGLG+NL ADTV+ + DWN
Sbjct: 1671 SVTYLRLDGSIPPGQRHSIVSRFNNDPSID-VLLLTTHVGGLGLNLTGADTVVFVEHDWN 1729
Query: 807 PQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 857
P DLQAM RAHRIGQK V VYR +++ T+EE+++ + KM + +IS
Sbjct: 1730 PMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVIS 1780
>ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 695
Score = 231 bits (589), Expect = 7e-60
Identities = 156/505 (30%), Positives = 256/505 (49%), Gaps = 60/505 (11%)
Query: 380 PSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGP 439
P F+ L +Q G+ WM L+ G+LAD+MGLGKT+Q + F+ L+++R +
Sbjct: 144 PGFL-WSSLFPYQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVIVFLGALLHSRVVSKA 202
Query: 440 HLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNV 499
L++ P + + W + + ++ P ++ + + N +G V
Sbjct: 203 -LILCPATIVSQWMDEWKRFYP---------------FVRIFFGFPNEDCEG-------V 239
Query: 500 LLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQN 559
L +YE K ++ + + W L +DE HR+KN + + S+ + R +++GTP+QN
Sbjct: 240 YLMSYE---KFKAGVKNFLWDVLILDEGHRIKNKNAQITLSVKKARSRGRFVLSGTPIQN 296
Query: 560 NIKELAALVNFLMPGRF----TIDQEID-------FENQDEQQEE--YIRDLHKR--LQP 604
N+ EL ++ +F+ PG + ++E + + N Q E Y L R ++P
Sbjct: 297 NLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRSLIEP 356
Query: 605 FILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVM 664
+ILRR K V LPSK ++I+ L+ Q E Y +L + + G +LL+ +
Sbjct: 357 YILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYNRVLESKH---IMKVLTGKANLLSGI 413
Query: 665 NELKKASNHPYLF---------DNAEERVLSKFGDGHKSR---ENILRGLIMSSGXXXXX 712
+ L+K NHP L D EE K G+ ++ L+ SS
Sbjct: 414 SMLRKVCNHPRLLFPRKLGVSEDCEEEASDEKNGEDEALELPGADVSYDLVSSSCKIKIL 473
Query: 713 XXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAE 772
+G++VL+FSQ +R+LDI+ ++ + R+DG P++ R +D FN E
Sbjct: 474 VDLLKKWRSEGNKVLVFSQTIRMLDIIER--CVRKYTYLRMDGRTPTSSRPGLVDRFN-E 530
Query: 773 DSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFV 832
D + F+FLL+T+ GGLG+NL A ++I+D DWNP D QA RA R GQK V +YRFV
Sbjct: 531 DEDVFLFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQAKERAWRYGQKKGVEIYRFV 590
Query: 833 SKDTVEEEVLERARKKMILEYAIIS 857
KDT+EE+V ++ K +L ++S
Sbjct: 591 CKDTIEEKVYQKQIFKDLLGKKVLS 615
>YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1514
Score = 221 bits (562), Expect = 9e-57
Identities = 166/585 (28%), Positives = 286/585 (48%), Gaps = 95/585 (16%)
Query: 129 SRNNNKVINYTLNDDSNDEDLMESSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSIDI 188
S ++N V++ + DD D++L SS+E +E +D G SP+ + T + +
Sbjct: 476 SSDSNDVLSES--DDDMDDELSTSSDEDEE--------VDADVGLENSPASTEATPTDES 525
Query: 189 VVDHRLKE--GVDNSGSTKNRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDLKENGTK 246
+ +LKE G N ST +D + F L K S + E + ++
Sbjct: 526 LNLIQLKEKYGHFNGSSTV---YDSRNKDEKFPTLDKHESSSSESSVMTGEESSIYSSSE 582
Query: 247 GLKRIENYYKQFIILDQEVRADPYTTREDIEVM-----DLEHERRIDEFEEFKVPERIID 301
+ EN D+E +D T + + + + + +D+ E+F V ++
Sbjct: 583 NESQNEN--------DRE--SDDKTPSVGLSALFGKGEESDGDLDLDDSEDFTVNSSSVE 632
Query: 302 SERFENEDGSGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPEQ---VKEFQNRTNSKIM 358
E E + S+ T+E A + V E +K+ + +K+
Sbjct: 633 GEELEKDQVDNSA---------------ATFERAGDFVHTQNENRDDIKDVEEDAETKV- 676
Query: 359 PQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLG 418
Q + +D + G LR +Q G+NW+A L++ + NGILADEMGLG
Sbjct: 677 ----------QEEQLSVVDVPVPSLLRGNLRTYQKQGLNWLASLYNNHTNGILADEMGLG 726
Query: 419 KTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLI 478
KT+QT+S +++L + GPHL+VVP S + W+ F ++APG + Y G+ R
Sbjct: 727 KTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRK-- 784
Query: 479 QDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLY 538
+ + + P A F+V + +Y+ +++D+ + +WQ++ +DEAH +KN S+ +
Sbjct: 785 EKRKGWNKPDA-------FHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRW 837
Query: 539 ESLNSFKVANRLLITGTPLQNNIKELAALVNFLMP----------------------GRF 576
++L +F RLL+TGTPLQNN+ EL +L+ FLMP GR
Sbjct: 838 QALLNFNTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGR- 896
Query: 577 TIDQEIDFE---NQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDV 633
+D+ I+ QD++ ++ + LH+ L+P++LRRLK DVEK +P+K E I+ +LS
Sbjct: 897 PVDKIIETGQNFGQDKETKKTVAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKR 956
Query: 634 QTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFD 678
Q Y + +++ + T G +S++N + +L+K NHP LF+
Sbjct: 957 QRFLYDDFMSRAQTKATLA-SGNFMSIVNCLMQLRKVCNHPNLFE 1000
Score = 140 bits (353), Expect = 2e-32
Identities = 80/193 (41%), Positives = 109/193 (56%), Gaps = 2/193 (1%)
Query: 722 DGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLL 781
+GHR LIF+QM ++LD+L +L+ G + RLDG R+I + FN DS VF+L
Sbjct: 1261 NGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNT-DSRITVFIL 1319
Query: 782 STRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEV 841
S+R+GGLGINL ADTVI +DSDWNP D Q R HRIGQ V +YRFVS+ T+E +
Sbjct: 1320 SSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNI 1379
Query: 842 LERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLE 901
L++A +K L+ +I G + S + EL E G + D K +
Sbjct: 1380 LKKANQKRQLDNVVIQEGDFTTDYFSKLSVRDLLGSELPENASGGDKPLIADADVAAK-D 1438
Query: 902 DLNLDEVLNHAED 914
L+ +L AED
Sbjct: 1439 PRQLERLLAQAED 1451
>Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 2971
Score = 216 bits (551), Expect = 2e-55
Identities = 116/303 (38%), Positives = 177/303 (58%), Gaps = 20/303 (6%)
Query: 386 GELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVP 445
G+LR++Q G++W+ ++ K NGILADEMGLGKT+QT+S ++ L + GPHL++VP
Sbjct: 419 GQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVP 478
Query: 446 LSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYE 505
S M W+ +W P + Y G Q R L + + +T P A F+V +T+Y+
Sbjct: 479 TSVMLNWEMELKRWCPSFKILTYYGAQKERKLKR--QGWTKPNA-------FHVCITSYK 529
Query: 506 YILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELA 565
+L+D W++L +DEA +KN +S ++SL +F RLL+TGTPLQN++ EL
Sbjct: 530 LVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLMELW 589
Query: 566 ALVNFLMPGRFTIDQEID----------FENQDEQQEEYIRDLHKRLQPFILRRLKKDVE 615
+L++FLMP F +E E E E ++ LHK L+PF+LRR+K DVE
Sbjct: 590 SLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVE 649
Query: 616 KSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPY 675
K +P K E ++R LS Q Y + + + + T G +S++N++ +L+K NHP
Sbjct: 650 KQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLA-TGHFMSVINILMQLRKVCNHPN 708
Query: 676 LFD 678
LFD
Sbjct: 709 LFD 711
Score = 137 bits (346), Expect = 1e-31
Identities = 67/130 (51%), Positives = 92/130 (70%), Gaps = 1/130 (0%)
Query: 722 DGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLL 781
+GHRVLIF+QM R+LD+L +L+ G + RLDG+ QR+ ++ FNA D F F+L
Sbjct: 1799 EGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNA-DKRIFCFIL 1857
Query: 782 STRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEV 841
STR+GG+G+NL ADTV+ +DSDWNP D QA R HRIGQ V +YR +S+ TVEE +
Sbjct: 1858 STRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENI 1917
Query: 842 LERARKKMIL 851
L++A +K +L
Sbjct: 1918 LKKANQKRML 1927
>CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1933
Score = 214 bits (545), Expect = 8e-55
Identities = 118/308 (38%), Positives = 182/308 (58%), Gaps = 22/308 (7%)
Query: 382 FIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHL 441
F+ G+LR++Q+ G++WM L+ KN NGILADEMGLGKT+QT+S ++ + + GPHL
Sbjct: 591 FLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHMACSESIWGPHL 650
Query: 442 VVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLL 501
+VVP S + W+ F KW P L + Y G +++ + + + P F+V +
Sbjct: 651 IVVPTSVILNWEMEFKKWCPALKILTYFG--TAKERAEKRKGWMKPNC-------FHVCI 701
Query: 502 TTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNI 561
T+Y+ + +D WQ+L +DEA +KN +S +++L + + RLL+TGTPLQN++
Sbjct: 702 TSYKTVTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSL 761
Query: 562 KELAALVNFLMPGRFTIDQEID----------FENQDEQQEEYIRDLHKRLQPFILRRLK 611
EL +L++FLMP F+ + E E I LHK L+PFILRRLK
Sbjct: 762 MELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPFILRRLK 821
Query: 612 KDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGH-VSLLNVMNELKKA 670
K+VEK LP KTE I+ LS Q Y + +++ + +K G+ +S+LN++ +L+K
Sbjct: 822 KEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRR--STKENLKSGNMMSVLNIVMQLRKC 879
Query: 671 SNHPYLFD 678
NHP LF+
Sbjct: 880 CNHPNLFE 887
Score = 135 bits (339), Expect = 7e-31
Identities = 70/139 (50%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
Query: 724 HRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLST 783
HR LIF+QM ++LD+L +LS G + RLDGT QR+ ++ FNA D F F+LST
Sbjct: 1256 HRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNA-DPKVFCFILST 1314
Query: 784 RAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLE 843
R+GG+G+NL ADTVI +DSDWNP D QA R HRIGQ +V +YR +S+ T+EE +L
Sbjct: 1315 RSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEENILR 1374
Query: 844 RA-RKKMILEYAIISLGVT 861
+A +K+ + E AI G T
Sbjct: 1375 KATQKRRLGELAIDEAGFT 1393
>At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1048
Score = 213 bits (543), Expect = 1e-54
Identities = 134/418 (32%), Positives = 217/418 (51%), Gaps = 29/418 (6%)
Query: 273 REDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTW 332
+ED D+ + F + + I+DS+ EN + + +L+ + C+
Sbjct: 11 KEDFGGKDISEDESESSFAVSE--DSIVDSD--ENRQQADLDDDNVDLTECKLDPEPCSE 66
Query: 333 EVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQ 392
V ++A + K+ ++ S+ P K+ + F+ LR++Q
Sbjct: 67 NVEGTFHEVAEDNDKDSSDKIADAAAAARSAQ-PTGFTYSTTKVRTKLPFLLKHSLREYQ 125
Query: 393 LTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAW 452
G++W+ ++ K NGILADEMGLGKT+ T++ ++ L + GPHL+VVP S M W
Sbjct: 126 HIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNW 185
Query: 453 QETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRS 512
+ F KW P + Y G+ R L + N F+V +TTY +++D
Sbjct: 186 ETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLN---------SFHVCITTYRLVIQDSK 236
Query: 513 TLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLM 572
KW++L +DEAH +KN +S +++L +F R+L+TGTPLQN++ EL +L++FLM
Sbjct: 237 MFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM 296
Query: 573 PGRFTIDQEID----------FENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKT 622
P F QE E Q++ +E I LH L+PF+LRRLK+DVEK LPSK
Sbjct: 297 PHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQLPSKH 356
Query: 623 ERILRVELSDVQTEYYKNIL--TKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFD 678
E ++ LS Q Y++ + T+ + LTS G +++++ +L+K NHP LF+
Sbjct: 357 EHVIFCRLSKRQRNLYEDFIASTETQATLTS---GSFFGMISIIMQLRKVCNHPDLFE 411
Score = 141 bits (355), Expect = 9e-33
Identities = 65/137 (47%), Positives = 96/137 (69%), Gaps = 1/137 (0%)
Query: 723 GHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLS 782
GHR LIF+QM ++LD+L ++++ G + RLDG+ P +R+ + FN + F+F+LS
Sbjct: 676 GHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFNT-NPKIFLFILS 734
Query: 783 TRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVL 842
TR+GG+GINL+ ADTVI +DSDWNP D QA R HRIGQ V +YR +S+ T+EE +L
Sbjct: 735 TRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENIL 794
Query: 843 ERARKKMILEYAIISLG 859
++A +K +L+ +I G
Sbjct: 795 KKANQKRVLDNLVIQNG 811
>At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 2049
Score = 213 bits (542), Expect = 2e-54
Identities = 158/541 (29%), Positives = 254/541 (46%), Gaps = 83/541 (15%)
Query: 387 ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNG------PH 440
+LR +Q GINW+ FL +GIL D+MGLGKT+Q + ++ RR + P
Sbjct: 1443 QLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPS 1502
Query: 441 LVVVPLSTMPAWQETFDKWAPG--LNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFN 498
++V P + + W +K+ L+ + Y+G+ ++D + E + N N
Sbjct: 1503 IIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGS--AQDRVSLREQFNN----------HN 1550
Query: 499 VLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQ 558
V++T+Y+ + KD L W + +DE H +KNA+S + ++ K +RL+++GTP+Q
Sbjct: 1551 VIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQ 1610
Query: 559 NNIKELAALVNFLMPGRFTIDQEIDFE---------------NQDEQQEEYIRDLHKRLQ 603
NNI EL +L +FLMPG +++ E + LHK++
Sbjct: 1611 NNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVM 1670
Query: 604 PFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGI---------- 653
PF+LRR K++V LP K + +LS VQ + Y+ + S I
Sbjct: 1671 PFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSG 1730
Query: 654 ------KGGHVSLLNVMNELKKASNHPYLF--DNAEERVLSKFG-----------DGHKS 694
+ + L K +HP L D E V S + HK
Sbjct: 1731 NADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKV 1790
Query: 695 REN----ILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYL---SIKG 747
+ + L+ ++ G HRVLIF+Q +LDI+ L +K
Sbjct: 1791 QHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKS 1850
Query: 748 INFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNP 807
+ + RLDG+V +R + FN++ + D V LL+T GGLG+NL +ADT++ + DWNP
Sbjct: 1851 VTYMRLDGSVVPEKRFEIVKAFNSDPTID-VLLLTTHVGGLGLNLTSADTLVFMEHDWNP 1909
Query: 808 QAD-----------LQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAII 856
D QAM RAHR+GQK V V+R + + T+EE+V+ + K+ + +I
Sbjct: 1910 MRDHQFANIELNKLWQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVI 1969
Query: 857 S 857
+
Sbjct: 1970 N 1970
>Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family
Length = 808
Score = 209 bits (531), Expect = 4e-53
Identities = 163/557 (29%), Positives = 267/557 (47%), Gaps = 68/557 (12%)
Query: 354 NSKIMPQNSSNYP-ANQRPKFEKLDAQPSFIKGGELRDFQLTGINW-----MAFLWSKND 407
NS +MP+ N+ + F +D LR Q GI + M +
Sbjct: 159 NSLVMPRPDKNHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRC 218
Query: 408 NGILADEMGLGKTVQTVSFISWLIYARRQNGPH---------LVVVPLSTMPAWQETFDK 458
ILADEMGLGKT+Q +S LI+ + GP+ L+V P S + W++ F K
Sbjct: 219 GAILADEMGLGKTLQCIS----LIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQK 274
Query: 459 WAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIK 518
W +G++ + D + K + ++VL+ +YE +L+ + +IK
Sbjct: 275 W---------LGSERIKIFTVDQDHKVEEFIKS---IFYSVLIISYEMLLRSLDQIKNIK 322
Query: 519 WQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPG---- 574
+ L DE HRLKN+ +L S R+++TGTP+QN+++E AL++F+ PG
Sbjct: 323 FDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGS 382
Query: 575 ----RFTIDQEIDFENQDEQQEEYIRDLHKRLQP--------FILRRLKKDVEKSLPSKT 622
R ++ I + EE ++L +R FILRR ++ + K LP K
Sbjct: 383 LSSYRKIYEEPIILSREPSASEEE-KELGERRAAELTCLTGLFILRRTQEIINKYLPPKI 441
Query: 623 ERILRVELSDVQTEYYKNILTKNYSAL-TSGIKGGHVSLLNVMNELKKASNHP-YLFDNA 680
E ++ +Q E Y+ +L G+ L+ + LKK NHP LF++
Sbjct: 442 ENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENSPHLI-CIGALKKLCNHPCLLFNSI 500
Query: 681 EERVLSKFGDGHKSRENILRGLI--------------MSSG--XXXXXXXXXXXXXXDGH 724
+E+ S D ++ + ++ +GL+ SG
Sbjct: 501 KEKECSSTCDKNEEK-SLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTE 559
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
+V++ S + L+IL + G + RLDG P +QR+ +D FN++ S+ F+FLLS++
Sbjct: 560 KVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSK 619
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLER 844
AGG+G+NL+ +I++D DWNP D+QAM+R R GQK V +YR ++ T+EE++ +R
Sbjct: 620 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQR 679
Query: 845 ARKKMILEYAIISLGVT 861
K L A++ L T
Sbjct: 680 QISKQGLCGAVVDLTKT 696
>YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1489
Score = 207 bits (526), Expect = 1e-52
Identities = 121/373 (32%), Positives = 204/373 (54%), Gaps = 26/373 (6%)
Query: 333 EVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQ 392
E AS + + K+F + N+ + ++ + I L+++Q
Sbjct: 651 ENASNALAETRAKAKQFDDHANAHEEEEEEDELNFQNPTSLGEITIEQPKILACTLKEYQ 710
Query: 393 LTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAW 452
L G+NW+A L+ + NGILADEMGLGKTVQ++S ++ L GP LVV P ST+ W
Sbjct: 711 LKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTPASTLHNW 770
Query: 453 QETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRS 512
K+ P + Y GN R +++ +F+ + K+ F+V++T+Y+ ++ D +
Sbjct: 771 VNEISKFLPQFKILPYWGNANDRKVLR--KFWDRKNLRYNKNAPFHVMVTSYQMVVTDAN 828
Query: 513 TLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLM 572
L +KWQ++ +DEA +K+++SS +++L SF NRLL+TGTP+QN+++EL AL++F+M
Sbjct: 829 YLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIM 888
Query: 573 PGRFTIDQEI------DFENQDEQ----QEEYIRDLHKRLQPFILRRLKKDVEKSLPSKT 622
P F E D E+ E ++ +R LH L+PF+LRR+KK+V+ L K
Sbjct: 889 PSLFDSHDEFNEWFSKDIESHAEANTKLNQQQLRRLHMILKPFMLRRVKKNVQSELGDKI 948
Query: 623 ERILRVELSDVQTEYY---KNILTKNYSAL-----------TSGIKGGHVSLLNVMNELK 668
E + +L+ Q + Y K+ ++ NY A+ ++ G +L+N + + +
Sbjct: 949 EIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDSTSNSASNSGSDQNLINAVMQFR 1008
Query: 669 KASNHPYLFDNAE 681
K NHP LF+ A+
Sbjct: 1009 KVCNHPDLFERAD 1021
Score = 131 bits (330), Expect = 7e-30
Identities = 70/152 (46%), Positives = 98/152 (64%), Gaps = 2/152 (1%)
Query: 722 DGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLL 781
+GHRVLI+ QM +++D++ +YL+ + N RLDG+ RR + H + FVFLL
Sbjct: 1314 EGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRR-DLVHDWQTNPEIFVFLL 1372
Query: 782 STRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEV 841
STRAGGLGINL ADTVI +DSDWNP D QAM RAHR+GQ V VYR + + T+EE +
Sbjct: 1373 STRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERM 1432
Query: 842 LERARKKMILEYAIISLGVTDGNKISSTKKNE 873
+RA++K ++ ++ G T I + + E
Sbjct: 1433 RDRAKQKEQVQQVVME-GKTQEKNIKTIEVGE 1463
>SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 852
Score = 205 bits (522), Expect = 4e-52
Identities = 144/477 (30%), Positives = 226/477 (47%), Gaps = 37/477 (7%)
Query: 410 ILADEMGLGKTVQTVSFISWLIYARRQNGPH-----LVVVPLSTMPAWQETFDKWA--PG 462
I+ADEMGLGKT+Q ++ + L+ Q G ++ P S + W KW
Sbjct: 291 IMADEMGLGKTLQCIALLWTLLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKDA 350
Query: 463 LNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFL 522
+ G + ++LI + + + + + VL+ +YE + L + + L
Sbjct: 351 ITPFILDGKSSKQELIMALQQWASVHGR---QVTRPVLIASYETLRSYVEHLNNAEIGML 407
Query: 523 AVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEI 582
DE HRLKN++S + +L+ V R++++GTP+QN++ E +L+NF PG QE
Sbjct: 408 LCDEGHRLKNSDSLTFTALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEF 467
Query: 583 ---------------DFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILR 627
E E + + +L K + FI+RR + K LP K E ++
Sbjct: 468 RKNYEIPILKGRDADGTEKDKENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVF 527
Query: 628 VELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAE--ERVL 685
LS+ Q YK+ +T + ++G L + LKK NHP L + E E
Sbjct: 528 CNLSEFQLSLYKHFITS--PEINKILRGTGSQPLKAIGLLKKICNHPDLLNLTEDLEGCE 585
Query: 686 SKFGDGHKSRENILRGL------IMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDIL 739
+ F G RE LRG +S ++++ S LD+
Sbjct: 586 ALFPPGFIPRE--LRGRDRNIDSSLSGKMLVLERMLYQIKQETDDKIVLISNYTSTLDLF 643
Query: 740 GDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVI 799
+G RLDGT+ +R+ +D FN + + FVFLLS++AGG GINL+ A+ +I
Sbjct: 644 EQLCRARGYKALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINLIGANRLI 703
Query: 800 IFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAII 856
+FD DWNP AD QA+AR R GQK VYRF++ T+EE++ +R K L ++
Sbjct: 704 LFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVV 760
>CE25143 [L] KOG0390 DNA repair protein SNF2 family
Length = 818
Score = 204 bits (520), Expect = 7e-52
Identities = 165/554 (29%), Positives = 256/554 (45%), Gaps = 51/554 (9%)
Query: 359 PQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQLTGINWMAFLWS--------KNDNGI 410
P++ S + + K K+ + G LR Q G+ F+W + I
Sbjct: 173 PEHLSEHAQLKEDKDRKVHVVADPVVGKILRPHQRDGVK---FMWDCVTGINIPEFHGCI 229
Query: 411 LADEMGLGKTVQTVSFISWLIYARRQNGP----HLVVVPLSTMPAWQETFDKW-APGLNC 465
+ADEMGLGKT+Q +S + L+ P ++V P S + W + KW LN
Sbjct: 230 MADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNA 289
Query: 466 VYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVD 525
+ + + + F A K VL+ +YE + L S + D
Sbjct: 290 MPVDSGKREQIIACLNSF----MADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICD 345
Query: 526 EAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEI--- 582
E HRLKN+E+ Y++L+ K A R+LI+GTP+QN++ E +LVNF+ PG E
Sbjct: 346 EGHRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKK 405
Query: 583 -----------DFENQDEQQ-EEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVEL 630
D ++D+++ EE +++ ++ I+RR + K LP K E I+ +
Sbjct: 406 FENAILKGRDADASSEDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKN 465
Query: 631 SDVQ-TEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLF-------DNA-E 681
S +Q T Y K I + + + KG S L+ + LKK NHPYL DN
Sbjct: 466 STLQETLYNKLIECEKQNRIVEKDKGATASALSFITHLKKLCNHPYLVYDEFQKPDNRFR 525
Query: 682 ERVLSKFGDGH--KSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDIL 739
+ LS F + KS + G + D VL+ S + +D
Sbjct: 526 NKCLSIFPESFNPKSFDPSFSGKM----KVLDYILAVTRKTTDDKFVLV-SNYTQTIDQF 580
Query: 740 GDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVI 799
+ ++G +F RLDG++ QR +D FN S F FLLS++AGG G+NL+ A+ ++
Sbjct: 581 MELCKLRGYDFVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNLIGANRLV 640
Query: 800 IFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLG 859
+FD DWNP D QAMAR R GQK +YR ++ ++EE++ +R K L ++ G
Sbjct: 641 MFDPDWNPANDDQAMARVWRDGQKKMCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAG 700
Query: 860 VTDGNKISSTKKNE 873
SS + E
Sbjct: 701 EDVARHFSSEQLRE 714
>YGL163c [L] KOG0390 DNA repair protein SNF2 family
Length = 898
Score = 204 bits (519), Expect = 9e-52
Identities = 145/482 (30%), Positives = 239/482 (49%), Gaps = 43/482 (8%)
Query: 410 ILADEMGLGKTVQTVSFISWLIYARRQNGPHLV-----VVPLSTMPAWQETFDKWAPGLN 464
I+ADEMGLGKT+Q ++ + W + + G L+ V P S + W KW G N
Sbjct: 332 IMADEMGLGKTLQCIALM-WTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWL-GPN 389
Query: 465 CVYYM---GNQASR---DLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIK 518
+ + G ++S + + QA+G+ +K VL+ +YE + ++ L +
Sbjct: 390 TLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVK-PVLIISYETLRRNVDQLKNCN 448
Query: 519 WQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTI 578
+ DE HRLKN +S + +L+S R++++GTP+QN++ E AL++F PG
Sbjct: 449 VGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGS 508
Query: 579 DQEI--DFEN-------------QDEQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTE 623
E +FEN + + E ++ L + FI+RR + K LP K E
Sbjct: 509 RAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYE 568
Query: 624 RILRVELSDVQTEYYKNIL-TKNYSALTSGIKGGHVSLLNVMNELKKASNHPYL------ 676
++ V L +Q E Y ++ ++ + G+ G L + LKK NHP L
Sbjct: 569 HVIFVNLKPLQNELYNKLIKSREVKKVVKGVGGSQP--LRAIGILKKLCNHPNLLNFEDE 626
Query: 677 FDNAEERVLSKFGD--GHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVR 734
FD+ ++ L + G K+R+ + S+ ++++ S +
Sbjct: 627 FDDEDDLELPDDYNMPGSKARDVQTK---YSAKFSILERFLHKIKTESDDKIVLISNYTQ 683
Query: 735 ILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMT 794
LD++ K + RLDGT+ +R+ +D FN + +F+FLLS++AGG GINL+
Sbjct: 684 TLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIG 743
Query: 795 ADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYA 854
A+ +I+ D DWNP AD QA+AR R GQK +YRF+S T+EE++ +R KM L
Sbjct: 744 ANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSC 803
Query: 855 II 856
++
Sbjct: 804 VV 805
>Hs4506397 [L] KOG0390 DNA repair protein SNF2 family
Length = 747
Score = 201 bits (512), Expect = 6e-51
Identities = 156/507 (30%), Positives = 243/507 (47%), Gaps = 51/507 (10%)
Query: 388 LRDFQLTGINWMAFLW----SKNDNG----ILADEMGLGKTVQTVSFISWLIYARRQNGP 439
LR Q G+ FLW S+ G I+ADEMGLGKT+Q ++ + L+ + P
Sbjct: 153 LRPHQREGVK---FLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKP 209
Query: 440 HL----VVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHL 495
+ VV P S + W KW G + + ++ Q E + N + +
Sbjct: 210 EIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGA---RV 266
Query: 496 KFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGT 555
+L+ +YE L + DE HRLKN+E+ Y++L+S + R+LI+GT
Sbjct: 267 SSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGT 326
Query: 556 PLQNNIKELAALVNFLMPGRFTIDQEID--FE-----------NQDEQQ--EEYIRDLHK 600
P+QN++ E +LV+F+ G E FE ++ ++Q EE +R+L
Sbjct: 327 PIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRELTS 386
Query: 601 RLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNIL--TKNYSALTSGIKGGHV 658
+ ++RR + K LP K E+++ L+ +QTE YK L K L G V
Sbjct: 387 IVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELLEGKMS--V 444
Query: 659 SLLNVMNELKKASNHPYL-FDNAEER------VLSKFGDGHKSR--ENILRGLIMSSGXX 709
S L+ + LKK NHP L +D E L F G+ S+ E L G ++
Sbjct: 445 SSLSSITSLKKLCNHPALIYDKCVEEEDGFVGALDLFPPGYSSKALEPQLSGKML----- 499
Query: 710 XXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHF 769
+V++ S + LD+ + + RLDGT+ +R ++ F
Sbjct: 500 VLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERF 559
Query: 770 NAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVY 829
N+ S DFVF+LS++AGG G+NL+ A+ +++FD DWNP D QAMAR R GQK +Y
Sbjct: 560 NSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIY 619
Query: 830 RFVSKDTVEEEVLERARKKMILEYAII 856
R +S T+EE++ +R K L ++
Sbjct: 620 RLLSAGTIEEKIFQRQSHKKALSSCVV 646
>7295868 [L] KOG0390 DNA repair protein SNF2 family
Length = 784
Score = 201 bits (510), Expect = 1e-50
Identities = 149/485 (30%), Positives = 237/485 (48%), Gaps = 46/485 (9%)
Query: 406 NDNG-ILADEMGLGKTVQTVSFISWLIYARRQNGPH--------LVVVPLSTMPAWQETF 456
N NG I+ADEMGLGKT+Q V+ L++ + GP +VV P S + W++ F
Sbjct: 177 NFNGCIMADEMGLGKTLQCVT----LVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEF 232
Query: 457 DKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGS 516
KW G M + I+ E ++ A+ L VLL +YE L
Sbjct: 233 TKWLHGRLLCLPMEGGTKENTIRALEQFSMTSAR----LGTPVLLISYETFRIYAEILCK 288
Query: 517 IKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMP--- 573
+ + DE HRLKN+++ Y++L K R+L++GTP+QN++ E +LVNF+ P
Sbjct: 289 YEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEML 348
Query: 574 -----------GRFTIDQEIDFENQDEQQE-EYIRDLHKRLQPFILRRLKKDVEKSLPSK 621
Q D Q+ Q+ E ++L + I+RR + + K LP K
Sbjct: 349 GTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVK 408
Query: 622 TERILRVELSDVQTEYYKNILTKNY--SALTSGIKGGHVSLLNVMNELKKASNHPYLFDN 679
E ++ +L+ +Q E Y N L + +L + ++ L + LKK +HP D
Sbjct: 409 FEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHP---DL 465
Query: 680 AEERVLSKFGDGHKSRENILRGLIMS-------SGXXXXXXXXXXXXXXDGH-RVLIFSQ 731
E++ ++ G ++ +N+L SG +G+ +V++ S
Sbjct: 466 IYEKLTAR-EKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISN 524
Query: 732 MVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGIN 791
+ LD+ + F RLDGT+ +R +D FN +S+ F+F+LS++AGG G+N
Sbjct: 525 YTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLN 584
Query: 792 LMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMIL 851
L+ A+ + +FD DWNP D QAMAR R GQK +YR V+ ++EE++L+R K L
Sbjct: 585 LIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSL 644
Query: 852 EYAII 856
II
Sbjct: 645 SSTII 649
>CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1785
Score = 200 bits (508), Expect = 2e-50
Identities = 168/588 (28%), Positives = 269/588 (45%), Gaps = 54/588 (9%)
Query: 347 KEFQNRTNSKIMPQNSSNYPANQRPKFEKL--DAQPSFIKGG---ELRDFQLTGINWMAF 401
K F+ R + K+ P+ +S + E+ ++P + G +L FQ G+ W+
Sbjct: 149 KNFKARID-KLKPEATSELVDTRMVTSEEYGKSSKPWKVNAGVWNKLHKFQQEGVEWLQK 207
Query: 402 LWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQN------GPHLVVVPLSTMPAWQET 455
GILADEMGLGKT+Q+V F+ + R + L+V +S + W +
Sbjct: 208 KTDHRSGGILADEMGLGKTIQSVVFLRSIQETARTHYKTTGLDTALIVCHVSIIAQWIKE 267
Query: 456 FDKWAPGLNCVYYMGNQASRDLIQDY--EFYTNPQAKGKKHLKFNVLLTTYEYILKDRST 513
++W P V+ + + S +DY + Q + K++ ++LTTY K +
Sbjct: 268 LNQWFPKAR-VFLLHSHCSTGRQEDYVGSIFRKLQRRRKEYPDGAIILTTYSLFTKLKKP 326
Query: 514 LGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMP 573
+ WQ + +DE H ++N + ++ R ++TGTP QN + E LV+F+ P
Sbjct: 327 IVKHLWQVVILDEGHYIRNENTKCSIAMRKLMTTQRFILTGTPFQNRLSEFWKLVDFVHP 386
Query: 574 GRFT------------IDQEIDFENQDE---QQEEYIRDLHKRLQPFILRRLKKDVEK-- 616
GR + I+ + E + E + LH ++P ILRRL++D ++
Sbjct: 387 GRLSDSATFHRNFTHIINAGANLNCSPEAAAKAYECLVALHIAVKPLILRRLQEDHKEVL 446
Query: 617 SLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYL 676
LP K E +L ELS Q Y + S + I + +N L NHP +
Sbjct: 447 QLPEKQEIVLSCELSKRQRRLY---MEYGNSHQVNEIIERRLKAFVGINHLTNICNHPGI 503
Query: 677 FDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXX-XXXDGHRVLIFSQMVRI 735
+ + KFG I SG +RV++F+Q +
Sbjct: 504 YRSLSP-ASPKFGS------------IKDSGKVEMTFKLFDDWFKSPTNRVILFTQRRTV 550
Query: 736 LDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTA 795
+ ++ +L+ KGI L G +A R I F +D + VFL++TRAGGLG+NL A
Sbjct: 551 ITMMEYFLAEKGIKCVSLTGADSAAARPKIIKKFE-DDVSIKVFLMTTRAGGLGLNLTCA 609
Query: 796 DTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAI 855
+ VIIFD DWNPQAD QA R +R+GQ N V +YR VS T+E+ + +K L +
Sbjct: 610 NKVIIFDPDWNPQADNQAKNRIYRMGQTNDVAIYRLVSNGTIEDLKFFKQVQKENLAARL 669
Query: 856 ISLGVTD----GNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQK 899
+ D N ++ + +P E SEI + G + + +QK
Sbjct: 670 LHNAEIDQFVPNNTLADLFRLKPKGLEGSEIGVYLDGEIAREGSKKQK 717
>CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1529
Score = 198 bits (504), Expect = 5e-50
Identities = 156/514 (30%), Positives = 252/514 (48%), Gaps = 70/514 (13%)
Query: 383 IKGG----ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNG 438
I+GG LR++QL GI W+ FL + +GILAD+MGLGKT+QT+ I+ + +
Sbjct: 973 IRGGFDTSMLREYQLEGITWIRFLRTYGLHGILADDMGLGKTLQTMCSIALSVDRDEMSE 1032
Query: 439 PH---LVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHL 495
H L+V P + + W ++++ P AS++L T +
Sbjct: 1033 FHRCSLIVCPRTLVDHWCLEWNRFFP-------QRVPASKNL-------TRCHGAEICVI 1078
Query: 496 KFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGT 555
++ L T Y + DR W ++ +DE H ++N++ ++ + +RL+++GT
Sbjct: 1079 AYDELKTAY---MMDRV------WNYIVLDEGHVMRNSKLRAWKFASQLVGKSRLILSGT 1129
Query: 556 PLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQ-----------------EEYIRDL 598
P+QN+ +L +L +LMPG + E F +Q ++ I L
Sbjct: 1130 PVQNSPADLWSLFAWLMPGY--LGSEKQFRSQFLKKIMKCRLPKANEADLKAGSAAISQL 1187
Query: 599 HKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHV 658
HK + PF++RRLK +V K LP K + EL++ Q E Y+ ++ + TS + +
Sbjct: 1188 HKLVLPFVMRRLKTEVLKELPEKNVQDYECELTEDQKEIYRFVVDR----CTSSQEDVGL 1243
Query: 659 SLLNVMNELKKASNHPYLFDN------AEERVLSKFGDGHKSRENILRGLIM------SS 706
S L + L+K ++H L + A + +LSK + L+ L++ +
Sbjct: 1244 SSLVTLITLRKLTDHTKLVHDTLAKIGAPQYILSKALAAKSGKMEALKQLLIECEICKNP 1303
Query: 707 GXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSI----KGINFQRLDGTVPSAQR 762
GHR LIF Q ++ D L ++ LDG+VP+ R
Sbjct: 1304 DEEVEQPEDLGGLVASGHRALIFCQWKTSAKLVSDALKSGEFGSVVSHLVLDGSVPAGDR 1363
Query: 763 RISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQ 822
++ FN ED V +L+T GG+G+NL ADTVI D DWNP DLQA+ RAHR+GQ
Sbjct: 1364 MKMVNRFN-EDKTIDVLILTTHVGGVGLNLTGADTVIFLDHDWNPMKDLQAIDRAHRLGQ 1422
Query: 823 KNHVMVYRFVSKDTVEEEVLERARKKMILEYAII 856
+V VYR +++ TVEE+V+ A+ K+ A+I
Sbjct: 1423 TRNVNVYRLITQGTVEEKVMSLAKFKLNTAQALI 1456
>At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1496
Score = 197 bits (500), Expect = 1e-49
Identities = 111/320 (34%), Positives = 181/320 (55%), Gaps = 19/320 (5%)
Query: 386 GELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVP 445
G L+++Q+ G+ W+ + + NGILADEMGLGKT+Q ++F++ L + GP LVV P
Sbjct: 584 GTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAP 643
Query: 446 LSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYE 505
S + W + ++ P L + Y G R +++ NP+ ++ F++L+T+Y+
Sbjct: 644 ASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKN---INPKRMYRRDAGFHILITSYQ 700
Query: 506 YILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELA 565
++ D +KWQ++ +DEA +K++ S +++L SF NRLL+TGTP+QNN+ EL
Sbjct: 701 LLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELW 760
Query: 566 ALVNFLMPGRFTIDQEID------FENQDEQ----QEEYIRDLHKRLQPFILRRLKKDVE 615
AL++F+MP F + + EN E E + LH L+PF+LRR+KKDV
Sbjct: 761 ALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVV 820
Query: 616 KSLPSKTERILRVELSDVQTEYYKNILTK-NYSALTSGIKGGH-----VSLLNVMNELKK 669
L +KTE + +LS Q +Y+ I K + + L +G ++L+N++ +L+K
Sbjct: 821 SELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRK 880
Query: 670 ASNHPYLFDNAEERVLSKFG 689
NHP LF+ E FG
Sbjct: 881 VCNHPELFERNEGSSYLYFG 900
Score = 124 bits (312), Expect = 9e-28
Identities = 70/163 (42%), Positives = 96/163 (57%), Gaps = 10/163 (6%)
Query: 702 LIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQ 761
L+ SG HRVL+F+QM ++L+IL DY++ + + RLDG+
Sbjct: 1201 LLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMD 1260
Query: 762 RRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIG 821
RR + F S+ FVFLLSTRAGGLGINL ADTVI ++SDWNP DLQAM RAHR+G
Sbjct: 1261 RRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG 1319
Query: 822 QKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGN 864
Q +TVEE++L RA +K ++ +++ G G+
Sbjct: 1320 Q---------TKDETVEEKILHRASQKNTVQQLVMTGGHVQGD 1353
>SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 768
Score = 193 bits (490), Expect = 2e-48
Identities = 143/475 (30%), Positives = 236/475 (49%), Gaps = 48/475 (10%)
Query: 408 NGILADEMGLGKTVQTVSFISWLI----YARRQNGPH--LVVVPLSTMPAWQETFDKWAP 461
+ ILADEMGLGKT+QT++ + L+ YA R + + +VV P++ + W+ F W
Sbjct: 187 SAILADEMGLGKTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLG 246
Query: 462 GLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLG-SIKWQ 520
Y+ A +D++ +T+ + +++++T YE + G I
Sbjct: 247 HERIHVYIARCA-----EDFQEFTSNKT-------YSIIITGYETVCTYLRNYGCGIDID 294
Query: 521 FLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQ 580
L DEAHRLK+ S + +LN K RLL+TGTPLQN++ E ++VNF++PG ++
Sbjct: 295 LLICDEAHRLKSMSSQTWITLNKLKTRKRLLLTGTPLQNDLSEYFSMVNFIIPG--SLGT 352
Query: 581 EIDFENQDEQQEEYIRDLHK----------RLQP-------FILRRLKKDVEKSLPSKTE 623
F+ Q E+ R ++ RLQ F LRR + K LP +T+
Sbjct: 353 PNSFKAQYERPILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANILAKHLPPRTD 412
Query: 624 RILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEER 683
+L ++ + Q Y ++L S++ KG + L ++ L K N L N +E
Sbjct: 413 IVLFIKPTHQQENVYGHVLDGFKSSVDQ--KGYY---LKILTRLSKICNSTILLRNEKEN 467
Query: 684 VLS-KFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDY 742
LS + D H + +++SS + +I SQ L+++ +
Sbjct: 468 FLSTELQDKHVFEQE---NMLLSSSKLQILAALLKSFQRGCQKAVIVSQYKETLELIELF 524
Query: 743 LSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDF-VFLLSTRAGGLGINLMTADTVIIF 801
LSI + F +L G+ P ++R + + +FN +F V LLS++AGG G+NL + +II+
Sbjct: 525 LSILHVRFCKLLGSTPFSERDLIVHNFNTSSFKEFSVLLLSSKAGGCGLNLTGSTRLIIY 584
Query: 802 DSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAII 856
+ WNP DLQA++R +R GQK V +Y F+S ++E + R K L + I
Sbjct: 585 EPSWNPAQDLQALSRIYRSGQKRPVCIYTFLSSGMLDERIFIRQNTKQGLSSSFI 639
>ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 883
Score = 187 bits (474), Expect = 1e-46
Identities = 114/315 (36%), Positives = 182/315 (57%), Gaps = 33/315 (10%)
Query: 379 QPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNG 438
QPS +K L+++QL G+NW+ L+ K NGILAD+MGLGKTVQ++S ++ L G
Sbjct: 267 QPSILKC-TLKEYQLRGLNWLVSLYDKGINGILADDMGLGKTVQSISLLAHLYETEEVPG 325
Query: 439 PHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFN 498
P LVV ST+ W + F ++ P + G+ + R ++ K+ +
Sbjct: 326 PFLVVTISSTLDNWAQEFARFLPSFRVCRFSGSPSERKELK------------KRFKNSD 373
Query: 499 VLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQ 558
V++TTY+ + D L IKWQ++ +DEA +K++ S +++L SFK NRLL+TGTP+Q
Sbjct: 374 VVITTYQTAVSDEKMLKKIKWQYMILDEAQAIKSSMSRRWKTLLSFKARNRLLLTGTPIQ 433
Query: 559 NNIKELAALVNFLMPGRF-TIDQEIDFENQDEQ---------QEEYIRDLHKRLQPFILR 608
N+++EL AL++F+MP F ++++ D+ +++ + E+ ++ LH L+PF+LR
Sbjct: 434 NSMQELWALLHFIMPTLFDSLNEFSDWFSKEIETSAIMKKTVDEKSLQRLHAILKPFMLR 493
Query: 609 RLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELK 668
R K DV L KT+ L +LS Q YK I T++ S++ + N++ +LK
Sbjct: 494 RHKSDVIHELGQKTQIDLYCDLSYRQKVLYKEI-TRSCSSM---------EMENLLMQLK 543
Query: 669 KASNHPYLFDNAEER 683
K NHP LF E R
Sbjct: 544 KVCNHPDLFKKLEPR 558
Score = 145 bits (365), Expect = 6e-34
Identities = 76/165 (46%), Positives = 104/165 (62%), Gaps = 2/165 (1%)
Query: 699 LRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVP 758
L I SG +GHR+L++ QM R++D++ DYL KG + RLDG++
Sbjct: 718 LNTFISDSGKLVVLDELLPKLKAEGHRLLMYFQMTRMIDLIEDYLVRKGYTYLRLDGSLK 777
Query: 759 SAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAH 818
++ R I + A D F+FLLSTRAGGLGINL ADTV+ +DSDWNP AD QAM RAH
Sbjct: 778 ASARAEVIRDWQASDK--FIFLLSTRAGGLGINLTAADTVVFYDSDWNPTADQQAMDRAH 835
Query: 819 RIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDG 863
R+GQ V VYR +++ TVEE+VLE A +K ++ +I + +G
Sbjct: 836 RLGQTRDVTVYRLITRGTVEEKVLESANRKDEIQKMVIHGNIFEG 880
>At3g19210 [L] KOG0390 DNA repair protein SNF2 family
Length = 688
Score = 186 bits (472), Expect = 2e-46
Identities = 142/510 (27%), Positives = 228/510 (43%), Gaps = 48/510 (9%)
Query: 388 LRDFQLTGINWM-----AFLWSKNDNG-ILADEMGLGKTVQTVSFISWLIYARRQNGPH- 440
LR Q G+ +M S N NG ILAD+MGLGKT+Q+++ + L+ P
Sbjct: 76 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMV 135
Query: 441 ---LVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKF 497
++V P S + W+ KW + + D++ + +T P++
Sbjct: 136 KKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSA------L 189
Query: 498 NVLLTTYE-YILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTP 556
VL+ +YE + + S L DEAHRLKN ++ +L S R+L++GTP
Sbjct: 190 QVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTP 249
Query: 557 LQNNIKELAALVNFLMPG--------RFTIDQEIDFENQDEQQEE-------YIRDLHKR 601
+QN+++E A+VNF PG R + I + EE +L +
Sbjct: 250 MQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSK 309
Query: 602 LQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLL 661
+ FILRR + LP K ++ +++ +Q+ Y + ++ +L
Sbjct: 310 VNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVL 369
Query: 662 NVMNELKKASNHPYL--------------FDNAEERVLSKFGDGHKSRENILRG--LIMS 705
+ LKK NHP L F+N E ++ G G + +S
Sbjct: 370 AYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELS 429
Query: 706 SGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRIS 765
R+++ S + LD+ + F RLDG+ ++R+
Sbjct: 430 GKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKL 489
Query: 766 IDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNH 825
++ N ++F FLLS++AGG G+NL+ A+ +++FD DWNP D QA AR R GQK
Sbjct: 490 VNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKR 549
Query: 826 VMVYRFVSKDTVEEEVLERARKKMILEYAI 855
V VYRF+S T+EE+V +R K L+ I
Sbjct: 550 VYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 579
>YBR073w [L] KOG0390 DNA repair protein SNF2 family
Length = 958
Score = 180 bits (457), Expect = 1e-44
Identities = 148/482 (30%), Positives = 238/482 (48%), Gaps = 62/482 (12%)
Query: 410 ILADEMGLGKTVQTVSFISWLI----YARR----QNG--------PHLVVVPLSTMPAWQ 453
+LAD+MGLGKT+ +++ I LI +A + Q+G LVV P++ + W+
Sbjct: 343 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 402
Query: 454 ETFDKWAPGLNC----VYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILK 509
F KW LN V + ++ S D+ D N K + VL+ YE +L
Sbjct: 403 REFGKW---LNLSRIGVLTLSSRNSPDM--DKMAVRNFL---KVQRTYQVLIIGYEKLLS 454
Query: 510 DRSTLGSIKW--QFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAAL 567
L K L DE HRLKN S + +L S + +LL+TGTP+QN++ E +
Sbjct: 455 VSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTI 514
Query: 568 VNFLMPG----------RFTID-----QEIDFENQD--EQQEEYIRDLHKRLQPFILRRL 610
++F+ PG RF I + N++ E+ EE +++ + + FILRR
Sbjct: 515 IDFINPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRT 574
Query: 611 KKDVEKSLPSKTERILRVELSDVQTEYYKNILTK---NYSALTSGIKGGHVSLLN-VMNE 666
+EK LP KT+ IL + Q +K+IL ++ LT G ++LL V N
Sbjct: 575 NAILEKYLPPKTDIILFCKPYSQQILAFKDILQGARLDFGQLTFSSSLGLITLLKKVCNS 634
Query: 667 LKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRV 726
+ PY + ++ +S+++ R L S +V
Sbjct: 635 PGLVGSDPYYKSHIKDT---------QSQDSYSRSL-NSGKLKVLMTLLEGIRKGTKEKV 684
Query: 727 LIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAG 786
++ S + LDI+ + +++ G++ RLDG++P+ QR + FN + F FLLS ++G
Sbjct: 685 VVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAI-FGFLLSAKSG 743
Query: 787 GLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERAR 846
G+G+NL+ +I+FD+DWNP DLQAM+R HR GQK +YR V+ ++E++L+R
Sbjct: 744 GVGLNLVGRSRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQL 803
Query: 847 KK 848
K
Sbjct: 804 MK 805
>At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26
(contains SNF2 family DNA-dependent ATPase domain)
Length = 1053
Score = 179 bits (455), Expect = 2e-44
Identities = 141/476 (29%), Positives = 222/476 (46%), Gaps = 48/476 (10%)
Query: 392 QLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPA 451
Q G+NW+ L ++ GIL D+MGLGKT+Q SF++ L +++ LVV P + +P
Sbjct: 381 QREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRA-LVVAPKTLLPH 439
Query: 452 WQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDR 511
W + Y G ++Y+ + Q KG +LLTTY+ + +
Sbjct: 440 WMKELATVGLSQMTREYYGTSTKA---REYDLHHILQGKG-------ILLTTYDIVRNNT 489
Query: 512 STL------------GSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQN 559
L KW ++ +DE H +KN + +SL ++R++I+GTP+QN
Sbjct: 490 KALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQN 549
Query: 560 NIKELAALVNFLMPGRFTIDQEIDFENQDEQQ---EEYIRDLHKRLQPFILRRLKKDV-- 614
N+K L + F I + D D +Q ++L + +QPF LRRLK +V
Sbjct: 550 NLKAL-SFNRFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFLRRLKSEVFG 608
Query: 615 ----EKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKA 670
L K E ++ + L+ Q + Y+ L N + S G ++ L + LKK
Sbjct: 609 DDGATSKLSKKDEIVVWLRLTACQRQLYEAFL--NSEIVLSAFDGSPLAALTI---LKKI 663
Query: 671 SNHPYLF-DNAEERVLSKFGDGHKSRE-NILRGLIMSSGXXXXXXXXXXXXXXDGHRVLI 728
+HP L A E VL E + L M I
Sbjct: 664 CDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAERLAMHIADNVDTDDFQTKNDS------I 717
Query: 729 FSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGL 788
++ I+ +L D L+ G +F R+DGT + R +++ F E +FLL+++ GGL
Sbjct: 718 SCKLSFIMSLL-DSLTSNGYSFLRIDGTTKAPDRLKTVEEFQ-EGHVAPIFLLTSQVGGL 775
Query: 789 GINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLER 844
G+ L AD VI+ D WNP D Q++ RA+RIGQ V+VYR ++ TVEE++ +
Sbjct: 776 GLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRK 831
>HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 757
Score = 179 bits (454), Expect = 3e-44
Identities = 168/547 (30%), Positives = 253/547 (45%), Gaps = 70/547 (12%)
Query: 723 GHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLS 782
GH+VLIFSQMVR LDIL DYL + ++R+DG V R+ +ID F DS+ FVFLL
Sbjct: 22 GHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLC 81
Query: 783 TRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVL 842
TRAGGLGINL ADT IIFDSDWNPQ DLQA AR HRIGQ V VYR +++++ E E+
Sbjct: 82 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 141
Query: 843 ERARKKMILEYAIISLGVTDGNKISSTK-KNEPSAGELSEILKFGA-GNMFKPNDNQQKL 900
++A K+ L+ A++ D N+ T + S E+ ++L+ GA G + D K
Sbjct: 142 DKASLKLGLDKAVLQ----DINRKGGTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKF 197
Query: 901 EDLNLDEVLNHAEDHITTPELGESNLGGEEFLR-QFEVTDYKADVDWDDIIPXXXXXXXX 959
+ ++D++L IT G+ G F + F + + D+ DD P
Sbjct: 198 CEEDIDQILQRRTHTITIQSEGK----GSTFAKASFVASGNRTDISLDD--PNFWQKWAK 251
Query: 960 XXXQRRIDEEYVREQLDIMNRKTAAIDKIKRSVNGETFGSDSEDE-------GNSKSRKR 1012
+D E E +++ ID+ + + + S EDE + +
Sbjct: 252 IA---ELDTEAKNE------KESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERP 302
Query: 1013 SKANNLDAFGEREIRA----LYKCILRFG---------------DIENKFEELIADGSLP 1053
+++ L+ R +RA + K +L FG + K E+I +L
Sbjct: 303 TRSRRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMIC-RALL 361
Query: 1054 VKSIDRYK--ELYHEMITEAETLMRDEEAKRHEIFSKLEKDAAEYR--QKIKNL----EI 1105
V + YK E I E T +D +A+ + S L R +K KN E+
Sbjct: 362 VYCVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLIPEL 421
Query: 1106 KPEDDAGKETPITLLSAKRREKRAILFEFHDTKALNADTLVNRRDNLKFLSNFVERNYKD 1165
K D P +L +K + H K L ++ + L E+ ++
Sbjct: 422 KDADWLATCNPEVVLHDDGYKKH---LKQHCNKVLLRVRMLYYL-KAEILGEAAEKAFEG 477
Query: 1166 DP-----LQFKFVNKNPKPVSAWNCVWGKEDDEKLLIGIYKYGYGAWMQIRDDPFLGLTE 1220
P + ++ PV W W E D+ LLIG++K+GY + +R DP L E
Sbjct: 478 SPARELDVPLPDIDYMEIPVD-W---WDAEADKSLLIGVFKHGYERYNAMRADPALCFLE 533
Query: 1221 KLFLNNE 1227
K+ + +E
Sbjct: 534 KVGMPDE 540
>Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 3124
Score = 177 bits (448), Expect = 1e-43
Identities = 102/298 (34%), Positives = 163/298 (54%), Gaps = 16/298 (5%)
Query: 386 GELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVP 445
G LRD+Q G++W+A L+ KN NGILADE GLGKTVQ ++F + L GPHLVVV
Sbjct: 1053 GALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVR 1112
Query: 446 LSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYE 505
+ W+ +W PGL + Y+G+ R+L + + P + F+V +T+Y
Sbjct: 1113 SCNILKWELELKRWCPGLKILSYIGSH--RELKAKRQEWAEPNS-------FHVCITSYT 1163
Query: 506 YILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELA 565
+ + ++W+ L +DE R+K +E++ + + RLL+ +PL N EL
Sbjct: 1164 QFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELW 1223
Query: 566 ALVNFLMPGRFTIDQEIDFENQDEQQEEY----IRDLHKRLQPFILRRLKKDVEKSLPSK 621
+V+FL+PG E+ ++Y + LH+ QPFILRR K+DVEK L K
Sbjct: 1224 TMVHFLVPGISRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKK 1283
Query: 622 TERILRVELSDVQTEYYKNILTKNYSALTSGIKGGH-VSLLNVMNELKKASNHPYLFD 678
E +L+ LS+ Q Y++++ + +K GH V++L+++ L++ NHP L +
Sbjct: 1284 YEHVLKCRLSNRQKALYEDVILQ--PGTQEALKSGHFVNVLSILVRLQRICNHPGLVE 1339
Score = 97.8 bits (242), Expect = 1e-19
Identities = 63/184 (34%), Positives = 94/184 (50%), Gaps = 7/184 (3%)
Query: 699 LRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVP 758
LR + SG +G RVLI SQM+ +LDIL +L+ + + R+D
Sbjct: 1854 LRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENAS 1913
Query: 759 SAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAH 818
S QR+ + FN D F +LST + GINL+ ADTV+ +D+D NP D +A
Sbjct: 1914 SEQRQELMRSFN-RDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCD 1972
Query: 819 RIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGE 878
RIG+ + +YR VS +++EE++L+ K +I E A GN S + + E
Sbjct: 1973 RIGRCKDIHIYRLVSGNSIEEKLLKNGTKDLIREVA------AQGNDYSMAFLTQRTIQE 2026
Query: 879 LSEI 882
L E+
Sbjct: 2027 LFEV 2030
>SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1063
Score = 171 bits (433), Expect = 8e-42
Identities = 97/281 (34%), Positives = 160/281 (56%), Gaps = 26/281 (9%)
Query: 333 EVASEIVKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGE----- 387
E A E V+ A E + F N + P NSS+ F+ P+ + E
Sbjct: 783 ESAQEAVQKAREHSQLFD--ANRQQSPNNSSSDMNEGEMNFQN----PTLVNAFEVKQPK 836
Query: 388 -----LRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLV 442
L+++QL G+NW+A L+ + NGILADEMGLGKTVQ++S +++L GP LV
Sbjct: 837 MLMCKLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIWGPFLV 896
Query: 443 VVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLT 502
+ P ST+ WQ+ ++ P L C+ Y G+ R +++ +F+ ++ F+V++T
Sbjct: 897 IAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILR--KFWCRKNMTYDENSPFHVVVT 954
Query: 503 TYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIK 562
+Y+ ++ D S+KWQ++ +DEA +K++ SS ++SL +FK NRLL+TGTP+QN ++
Sbjct: 955 SYQLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQ 1014
Query: 563 ELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQ 603
EL AL++F+MP F++ +E E + +D+ Q
Sbjct: 1015 ELWALLHFIMPSL--------FDSHNEFSEWFSKDIESHAQ 1047
>Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 348
Score = 171 bits (433), Expect = 8e-42
Identities = 102/258 (39%), Positives = 147/258 (56%), Gaps = 10/258 (3%)
Query: 657 HVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXX 716
++ L N+M L+K NHPYL + + V +F I L+ +SG
Sbjct: 67 NLKLQNIMMLLRKCCNHPYLIEYPIDPVTQEF--------KIDEELVTNSGKFLILDRML 118
Query: 717 XXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSND 776
GH+VL+FSQM +LDIL DY ++ NF RLDG++ ++R ++ FN D
Sbjct: 119 PELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEV 177
Query: 777 FVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDT 836
F+FL+STRAGGLGINL ADTVII+DSDWNPQ+DLQA R HRIGQ V+VYR V+ +T
Sbjct: 178 FIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANT 237
Query: 837 VEEEVLERARKKMILEYAIISLGVTDGNKIS-STKKNEPSAGELSEILKFGAGNMFKPND 895
++++++ERA K LE II G + + KN EL E+LK
Sbjct: 238 IDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLNLSKNFLDPKELMELLKSRDYEREIKGS 297
Query: 896 NQQKLEDLNLDEVLNHAE 913
++ + D +L+ +L+ ++
Sbjct: 298 REKVISDKDLELLLDRSD 315
>7293730 [R] KOG0383 Predicted helicase
Length = 884
Score = 167 bits (423), Expect = 1e-40
Identities = 116/365 (31%), Positives = 175/365 (47%), Gaps = 49/365 (13%)
Query: 219 EFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTR----- 273
E+ IKW + S+ H W L + ++ + Y E D TR
Sbjct: 513 EYFIKWHNMSYWHCEWVPEVQLDVHHPLMIRSFQRKYDMEEPPKFEESLDEADTRYKRIQ 572
Query: 274 --EDIEVMDLEHERRIDEFEEFK---VPERIIDSERFENEDGSGSSQLKYLVKWRRLNYD 328
+D M + + E +K PE +I +R N + YLVKWR L YD
Sbjct: 573 RHKDKVGMKANDDAEVLEERFYKNGVKPEWLI-VQRVINHRTARDGSTMYLVKWRELPYD 631
Query: 329 ECTWEVASEIVKMAPEQVKEFQNRT-------------------NSKIMPQNSSNYPAN- 368
+ TWE + ++ + + +Q+ SK+ ++ + P
Sbjct: 632 KSTWEEEGDDIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKH 691
Query: 369 -----QRPKFE---KLDAQPSFIKGG--ELRDFQLTGINWMAFLWSKNDNGILADEMGLG 418
++P + K + QP+F++G +L +Q+ GINW+ + W + + ILADEMGLG
Sbjct: 692 YTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLG 751
Query: 419 KTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLI 478
KT+QTV+F+ L GP LV VPLST+ W+ F+ WAP C+ Y+G++ SR +I
Sbjct: 752 KTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVI 811
Query: 479 QDYEF-YTNPQAKGKK-------HLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRL 530
++ E + +G K KFNVLLT+YE I D + LGSI W L VDEAHRL
Sbjct: 812 RENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRL 871
Query: 531 KNAES 535
K+ +S
Sbjct: 872 KSNQS 876
>HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 310
Score = 166 bits (420), Expect = 3e-40
Identities = 99/248 (39%), Positives = 141/248 (55%), Gaps = 10/248 (4%)
Query: 667 LKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRV 726
L+K NHPYL + + V +F I L+ +SG GH+V
Sbjct: 4 LRKCCNHPYLIEYPIDPVTQEF--------KIDEELVTNSGKFLILDRMLPELKKRGHKV 55
Query: 727 LIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAG 786
L+FSQM +LDIL DY ++ NF RLDG++ ++R ++ FN D F+FL+STRAG
Sbjct: 56 LLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAG 114
Query: 787 GLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERAR 846
GLGINL ADTVII+DSDWNPQ+DLQA R HRIGQ V+VYR V+ +T++++++ERA
Sbjct: 115 GLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 174
Query: 847 KKMILEYAIISLGVTDGNKIS-STKKNEPSAGELSEILKFGAGNMFKPNDNQQKLEDLNL 905
K LE II G + + KN EL E+LK ++ + D +L
Sbjct: 175 AKRKLEKLIIHKNHFKGGQSGLNLSKNFLDPKELMELLKSRDYEREIKGSREKVISDKDL 234
Query: 906 DEVLNHAE 913
+ +L+ ++
Sbjct: 235 ELLLDRSD 242
>7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1477
Score = 165 bits (418), Expect = 5e-40
Identities = 107/338 (31%), Positives = 175/338 (51%), Gaps = 56/338 (16%)
Query: 370 RPKFEKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISW 429
RP+ + L QP KG L+ +Q+ G+ W+A ++ + +GILADEMGLGKTVQ+++F+
Sbjct: 519 RPEMKDLP-QPKMFKG-TLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCH 576
Query: 430 LIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQA 489
+ E + + P V Y G+ A R +++ +
Sbjct: 577 IA----------------------EHYGVFVPDFKVVPYWGSPAERKILRQFW------- 607
Query: 490 KGKKHL-----KFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSF 544
+KHL F+V++T+Y+ ++ D IKWQ++ +DEA +K+A S ++ L F
Sbjct: 608 -DQKHLHTRDASFHVVITSYQLVVSDYKYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGF 666
Query: 545 KVANRLLITGTPLQNNIKELAALVNFLMPGR----------FTIDQEIDFENQDEQQEEY 594
NRLL++GTP+QN++ EL AL++F+MP F+ D E EN+ E+
Sbjct: 667 SCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQ 726
Query: 595 IRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYK---------NILTKN 645
I LH L+PF+LRR+KKDVE L K E ++ L+ Q Y+ ++L
Sbjct: 727 ISRLHMILKPFMLRRIKKDVENELSDKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLT 786
Query: 646 YSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEER 683
+ T+ +L+N++ + +K NHP LF+ + R
Sbjct: 787 SGSTTTSSSSSASNLMNLVMQFRKVCNHPELFERRDAR 824
Score = 75.5 bits (184), Expect = 6e-13
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 702 LIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQ 761
LI +G +GHRVLI+SQM +++D+L +Y+ + + RLDG+ +
Sbjct: 1082 LITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISA 1141
Query: 762 RRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADL 811
RR + F ++ FVFLLSTRAGGLGINL ADT+ + + P+ +L
Sbjct: 1142 RRDMVADFQTR-ADIFVFLLSTRAGGLGINLTAADTLKSSVTPYRPKPNL 1190
>SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 922
Score = 163 bits (412), Expect = 2e-39
Identities = 115/327 (35%), Positives = 162/327 (49%), Gaps = 41/327 (12%)
Query: 381 SFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPH 440
SF +L+D+Q+ GINW+ L+ GILADEMGLGKT QT++F S L+ + NGPH
Sbjct: 380 SFSPDIKLQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFS-LLMDKNINGPH 438
Query: 441 LVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVL 500
LV+ P STM W F K+ P L Y G+Q R+ I++ +N + +NV+
Sbjct: 439 LVIAPASTMENWLREFAKFCPKLKIELYYGSQVEREEIRE-RINSNKDS-------YNVM 490
Query: 501 LTTYEYILK---DRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPL 557
LTTY DR L + K+ DE H LKN S Y L S R+L+TGTPL
Sbjct: 491 LTTYRLAATSKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPL 550
Query: 558 QNNIKELAALVNFLMPGRFTI-------------DQEIDFENQDEQQEEYIRDLHKRLQP 604
QNN+KEL +L+ F++P F E DFE + E+ + + P
Sbjct: 551 QNNLKELISLLAFILPHVFDYGLKSLDVIFTMKKSPESDFE-RALLSEQRVSRAKMMMAP 609
Query: 605 FILRRLKKDVEKSLPSKTERILRVELSDVQTEYY--------------KNILTKNYSALT 650
F+LRR K V +LP KT I E S+ + Y +N++ N
Sbjct: 610 FVLRRKKSQVLDALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNLDTNA 669
Query: 651 SGIKGGHVSLLNVMNELKKASNHPYLF 677
+ K + V+ +L+K ++HP LF
Sbjct: 670 NLAKKKSTAGF-VLVQLRKLADHPMLF 695
Score = 116 bits (290), Expect = 3e-25
Identities = 63/131 (48%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Query: 722 DGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLL 781
+G RV++FSQ ++LDIL + + F R DG+ R+ ID F A++S + VFLL
Sbjct: 776 NGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESIN-VFLL 834
Query: 782 STRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEV 841
ST+AGG GINL A+ VI++D +NP DLQA RAHR+GQK V VY+FV KDT+EE +
Sbjct: 835 STKAGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHI 894
Query: 842 LERARKKMILE 852
A K+ L+
Sbjct: 895 QRLANAKIALD 905
>CE23323 [L] KOG0390 DNA repair protein SNF2 family
Length = 751
Score = 162 bits (411), Expect = 3e-39
Identities = 125/432 (28%), Positives = 198/432 (44%), Gaps = 39/432 (9%)
Query: 441 LVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVL 500
L++VP S + W+ FDKW + + A+ P L
Sbjct: 188 LIIVPSSLVNNWKAEFDKWWRLMRFPAVIALTANDITTYQSTIKLMPY-----------L 236
Query: 501 LTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNN 560
+ +Y+ + L I++ + DE H+LKN + L ++L S ++ RL++TGTP+QN+
Sbjct: 237 VISYDLAQRHVEKLKIIRFDVMVCDEGHKLKNLDGKLRKTLLSLEIPRRLILTGTPMQND 296
Query: 561 IKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDVE-KSLP 619
+E +L++F+ P F ++F + E + +L + +LRR DV+ K LP
Sbjct: 297 FEEFYSLLDFVRPSVF--GSIVEFRKMCSDRPEQLNEL---IDECMLRRTAADVDLKHLP 351
Query: 620 SKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHP-YLFD 678
K E IL S +Q + S + + G +SL+ +L +NHP L D
Sbjct: 352 EKHEYILFCAASPIQKHVH--------SEICDYMTGDALSLIFFARQL---ANHPKLLLD 400
Query: 679 NAEERVLSKFGDGHKSRENIL--------RGLIMSSGXXXXXXXXXXXXXXDGHRVLIFS 730
N E+ ++ HK +L RG + SG +I S
Sbjct: 401 NLREK--TEKSKAHKHSPLLLAFDGAHMPRGGVKESGKLTALVDMIKCFRLLQECTVIVS 458
Query: 731 QMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGI 790
+ LD++ RLDG R+ + FN +FLLST+AGG+G+
Sbjct: 459 NYIETLDMIQQLCEYLNFKVLRLDGKTQVPDRQKLVRTFNDHRDPSNIFLLSTKAGGVGL 518
Query: 791 NLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMI 850
NL+ A +++FDSDWNP D QAMAR R GQ +YR ++ T+EE++L+R KK
Sbjct: 519 NLIGASRLVLFDSDWNPANDQQAMARIWRDGQVRPCHIYRLITTGTIEEKMLQRQIKKTG 578
Query: 851 LEYAIISLGVTD 862
L I ++ V D
Sbjct: 579 LGCVIDAIEVGD 590
>At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1447
Score = 156 bits (394), Expect = 3e-37
Identities = 153/555 (27%), Positives = 238/555 (42%), Gaps = 104/555 (18%)
Query: 387 ELRDFQLTGINWMAFLWSK----------NDNG---ILADEMGLGKTVQTVSFISWLIYA 433
+L+ Q+TGI F+W D G ILA MGLGKT Q ++F+ +
Sbjct: 686 KLKVHQVTGIR---FMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRC 742
Query: 434 RRQN-GPHLVVVPLSTMPAWQETFDKWAPG--LNCVYYMGNQASRDLIQDYEFYTNPQAK 490
L+V P++ + W+ F+KW P +M SR+ + ++ T + K
Sbjct: 743 VDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRE--RRFDLLTKWRKK 800
Query: 491 GKKHLK--FNVLLTTYEYILKDRSTLGSI------KWQFLAVDEAHRLKNAESSLYESLN 542
G L N + +KD + I L DEAH +KN ++ ++L
Sbjct: 801 GGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQALK 860
Query: 543 SFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEID--FENQDEQ---------- 590
K R+ +TG+PLQNN+ E +V+F+ G E F+N E
Sbjct: 861 QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAED 920
Query: 591 -----QEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILT-- 643
Q +I L+++L+ F+ R V+K LP KT ++ V+LS +Q Y+ L
Sbjct: 921 VKIMNQRSHI--LYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLELY 978
Query: 644 ------------KNYSALTSGIKG--GHVSLLNVMNELKKASNHPYLFD-----NAEERV 684
KN+ A + H + + +E K + D +++E +
Sbjct: 979 GFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENI 1038
Query: 685 LSKFGDGHKSR-----ENILRGLIMS-----------------SGXXXXXXXXXXXXXXD 722
G K R ++ + G + SG
Sbjct: 1039 DYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILSMSADV 1098
Query: 723 GHRVLIFSQMVRILDILGDYLSI------------KGINFQRLDGTVPSAQRRISIDHFN 770
G + L+FSQ + LD++ YLS KG ++ R+DG S++R+ +D FN
Sbjct: 1099 GDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFN 1158
Query: 771 AEDSNDF-VFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVY 829
D+ L+STRAG LGINL A+ VII D WNP DLQA+ RA R GQK V Y
Sbjct: 1159 EPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAY 1218
Query: 830 RFVSKDTVEEEVLER 844
R +++ T+EE++ +R
Sbjct: 1219 RLMARGTIEEKIYKR 1233
>At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 874
Score = 129 bits (325), Expect = 3e-29
Identities = 101/320 (31%), Positives = 160/320 (49%), Gaps = 31/320 (9%)
Query: 723 GHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLS 782
G ++L+FS VR+LDIL +L KG +F RLDG+ P+ R+ +D FNA S VFL+S
Sbjct: 556 GDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVDDFNASPSKQ-VFLIS 614
Query: 783 TRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVL 842
T+AGGLG+NL++A+ V+IFD +WNP DLQA R+ R GQK HV+V+R +S ++EE V
Sbjct: 615 TKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVY 674
Query: 843 ERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKLED 902
R K L ++ G + + + GEL FG N+F+ D KL
Sbjct: 675 TRQVYKQQLSNIAVA-GKMETRYFEGVQDCKEFQGEL-----FGISNLFR--DLSDKLFT 726
Query: 903 LNLDEVLNHAE-DHITTPELGESNLGGEEFLRQFEV-TDYKADVDWDDIIPXXXXXXXXX 960
++ E+ + D L E+ + +E ++ EV YK +++ +
Sbjct: 727 SDIVELHRDSNIDENKKRSLLETGVSEDE--KEEEVMCSYKPEMEKPIL----------- 773
Query: 961 XXQRRIDEEYVREQLDIMNRKTAAIDKIKRSVNGETFGSDSEDEGNSKSRKRSKANNLDA 1020
+ + Y DI+N +R +NG+ +S D K + S+ ++ +
Sbjct: 774 ---KDLGIVYAHRNEDIINIGETTTSTSQR-LNGD---GNSADRKKKKRKGCSEEEDMSS 826
Query: 1021 FGEREIRALYKCILRFGDIE 1040
+ R YK + F +E
Sbjct: 827 SNREQKREKYKMLAEFKGME 846
Score = 121 bits (304), Expect = 7e-27
Identities = 81/282 (28%), Positives = 140/282 (48%), Gaps = 40/282 (14%)
Query: 388 LRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYAR-----------RQ 436
L + Q G+ +M L+ N GIL D+MGLGKT+QT++F++ +Y +
Sbjct: 151 LLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLA-AVYGKDGDAGESCLLESD 209
Query: 437 NGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLK 496
GP L++ P S + W+ F +WA Y G+ +RD+I + +A+G +
Sbjct: 210 KGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGS--NRDMILE-----KLKARGVE--- 259
Query: 497 FNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTP 556
VL+T+++ L I W+ + DEAHRLKN +S LYE+ K R+ +TGT
Sbjct: 260 --VLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTV 317
Query: 557 LQNNIKELAALVNFLMPG--------RFTIDQEIDFENQDEQQEEYIRDLHKR------- 601
+QN I EL L ++ PG R D+ + + E +++ KR
Sbjct: 318 MQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSL 377
Query: 602 LQPFILRRLKKD-VEKSLPSKTERILRVELSDVQTEYYKNIL 642
L+ ++LRR K++ + + K + ++ ++S +Q Y+ ++
Sbjct: 378 LRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMI 419
>At3g24340 [L] KOG0390 DNA repair protein SNF2 family
Length = 1132
Score = 119 bits (297), Expect = 5e-26
Identities = 131/515 (25%), Positives = 216/515 (41%), Gaps = 68/515 (13%)
Query: 394 TGINWMAFLWSKNDNG-ILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAW 452
T IN + + K G I++ + G GKT TV F+ + R N +V+ P + M W
Sbjct: 596 TKINELNSVGVKGSGGCIISHKAGTGKTRLTVVFLQSYL-KRFPNSHPMVIAPATLMRTW 654
Query: 453 QETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLK---------------- 496
++ KW +N +Y N +D E + + +G +H
Sbjct: 655 EDEVRKW--NVNIPFYNMNSLQLSGYEDAEAVS--RLEGNRHHNSIRMVKLVSWWKQKSI 710
Query: 497 FNVLLTTYEYILKDRSTLGSIKWQ--------FLAVDEAHRLKNAESSLYESLNSFKVAN 548
+ YE + +++T G ++ L +DE H +N S +++ L +
Sbjct: 711 LGISYPLYEKLAANKNTEGMQVFRRMLVELPGLLVLDEGHTPRNQSSLIWKVLTEVRTEK 770
Query: 549 RLLITGTPLQNNIKELAALVNFLMPG-RFTIDQEIDFENQDEQQEEYIR--------DLH 599
R+ ++GT QNN KEL+ ++ P + TI I ++ Q+ E+ R DL
Sbjct: 771 RIFLSGTLFQNNFKELSNVLCLARPADKDTISSRIHELSKCSQEGEHGRVNEENRIVDLK 830
Query: 600 KRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKN----YSALTSGIKG 655
+ F+ +++SLP + ++ + Q + I T + S +
Sbjct: 831 AMIAHFVHVHEGTILQESLPGLRDCVVVLNPPFQQKKILDRIDTSQNTFEFEHKLSAVSV 890
Query: 656 GHVSLLNVMNELKKASN--HPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXX 713
H SL N KK P + R+ K+ +G K++ L I SG
Sbjct: 891 -HPSLYLCCNPTKKEDLVIGPATLGTLK-RLRLKYEEGVKTK--FLIDFIRISGTVK--- 943
Query: 714 XXXXXXXXDGHRVLIFSQMVRILDILGDYLSIK-----GINFQRLDGTVPSAQRRISIDH 768
+VL++SQ + L ++ + L + G + G V R+ ID+
Sbjct: 944 ----------EKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDN 993
Query: 769 FNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMV 828
FN DS V L ST+A GI+L+ A V+I D WNP + QA++RA RIGQK V +
Sbjct: 994 FNKPDSGSKVLLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFI 1053
Query: 829 YRFVSKDTVE-EEVLERARKKMILEYAIISLGVTD 862
Y + KDT E + +++ K I E S D
Sbjct: 1054 YHLMVKDTSEWNKYCKQSEKHRISELVFSSTNEKD 1088
>Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 220
Score = 118 bits (295), Expect = 8e-26
Identities = 72/186 (38%), Positives = 104/186 (55%), Gaps = 9/186 (4%)
Query: 395 GINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQE 454
G NW+A + + IL DEMGLGKT QT++ +L GP L++ P E
Sbjct: 15 GSNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPYVCF----E 70
Query: 455 TFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTL 514
++ + ++ N S D E Q K+ +F+VLLTTYE LKD S L
Sbjct: 71 QLERRNAEICSRSFLCNICS-----DKEERACLQQDLKQESRFHVLLTTYEICLKDASFL 125
Query: 515 GSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPG 574
S W L VDEAHRLKN S L+++L+ F V LL+TGTP+QN+++EL +L++F+ P
Sbjct: 126 KSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPD 185
Query: 575 RFTIDQ 580
F+ ++
Sbjct: 186 LFSKEE 191
>CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 689
Score = 118 bits (295), Expect = 8e-26
Identities = 136/550 (24%), Positives = 229/550 (40%), Gaps = 91/550 (16%)
Query: 326 NYDEC--TWEVASEIVKMAPEQVKEFQNRTNSKI----MPQNS---SNYPANQRPKFEKL 376
NYD +W VAS +K N T K+ +PQN +N+ P
Sbjct: 133 NYDPAKRSWTVASSDHITISNILK---NATAVKVELEPLPQNIIGLTNFKPKAAPSDLNT 189
Query: 377 DAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQ 436
PS I+ L +Q G+ F ++ +LADEMGLGK+VQ ++ + +
Sbjct: 190 VMDPSLIE--RLFPYQKEGV---IFALERDGRILLADEMGLGKSVQALTIARYY----KA 240
Query: 437 NGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLK 496
+ P L+V P S AW++ + + P ++ ++ + S D + D
Sbjct: 241 DWPLLIVCPASVKGAWKKQLNTFFPIIHRIFIVDK--SSDPLPDV------------CTS 286
Query: 497 FNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSF-KVA-NRLLITG 554
V + +YE ++ L K++ + DE+H LK+ ++ + KVA + +L++G
Sbjct: 287 NTVAIMSYEQMVLKHDILKKEKYRTIIFDESHMLKDGKARRTKVATDLSKVALHVILLSG 346
Query: 555 TPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQ-------------EEYIRDLHKR 601
TP + EL + + FT E D +Q EE + KR
Sbjct: 347 TPALSRPSELFTQIRLIDHKLFTNFHEFAIRYCDGKQGRFCFEAKGCTNSEELAAIMFKR 406
Query: 602 LQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLL 661
L ++RRLK DV K LP K ++ V +
Sbjct: 407 L---MIRRLKADVLKDLPEKRREVVYVSGPTIDAR------------------------- 438
Query: 662 NVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENI--LRGLIMSSGXXXXXXXXXXXX 719
M++L+KA A+ ++ H+S L G++ ++
Sbjct: 439 --MDDLQKA--------RADYEKVNSMERKHESLLEFYSLTGIVKAAAVCEHILENYFYP 488
Query: 720 XXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVF 779
+VLIF+ +LD + ++ + + R+DG PS +R D F +D N V
Sbjct: 489 DAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDD-NIRVA 547
Query: 780 LLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEE 839
+LS A G+GI L A V+ + +NP +QA RAHR+GQK+ V V ++K T ++
Sbjct: 548 VLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADD 607
Query: 840 EVLERARKKM 849
+ ++K+
Sbjct: 608 VMWNMVQQKL 617
>CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 687
Score = 118 bits (295), Expect = 8e-26
Identities = 136/550 (24%), Positives = 229/550 (40%), Gaps = 91/550 (16%)
Query: 326 NYDEC--TWEVASEIVKMAPEQVKEFQNRTNSKI----MPQNS---SNYPANQRPKFEKL 376
NYD +W VAS +K N T K+ +PQN +N+ P
Sbjct: 131 NYDPAKRSWTVASSDHITISNILK---NATAVKVELEPLPQNIIGLTNFKPKAAPSDLNT 187
Query: 377 DAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQ 436
PS I+ L +Q G+ F ++ +LADEMGLGK+VQ ++ + +
Sbjct: 188 VMDPSLIE--RLFPYQKEGV---IFALERDGRILLADEMGLGKSVQALTIARYY----KA 238
Query: 437 NGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLK 496
+ P L+V P S AW++ + + P ++ ++ + S D + D
Sbjct: 239 DWPLLIVCPASVKGAWKKQLNTFFPIIHRIFIVDK--SSDPLPDV------------CTS 284
Query: 497 FNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSF-KVA-NRLLITG 554
V + +YE ++ L K++ + DE+H LK+ ++ + KVA + +L++G
Sbjct: 285 NTVAIMSYEQMVLKHDILKKEKYRTIIFDESHMLKDGKARRTKVATDLSKVALHVILLSG 344
Query: 555 TPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQ-------------EEYIRDLHKR 601
TP + EL + + FT E D +Q EE + KR
Sbjct: 345 TPALSRPSELFTQIRLIDHKLFTNFHEFAIRYCDGKQGRFCFEAKGCTNSEELAAIMFKR 404
Query: 602 LQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLL 661
L ++RRLK DV K LP K ++ V +
Sbjct: 405 L---MIRRLKADVLKDLPEKRREVVYVSGPTIDAR------------------------- 436
Query: 662 NVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENI--LRGLIMSSGXXXXXXXXXXXX 719
M++L+KA A+ ++ H+S L G++ ++
Sbjct: 437 --MDDLQKA--------RADYEKVNSMERKHESLLEFYSLTGIVKAAAVCEHILENYFYP 486
Query: 720 XXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVF 779
+VLIF+ +LD + ++ + + R+DG PS +R D F +D N V
Sbjct: 487 DAPPRKVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDD-NIRVA 545
Query: 780 LLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEE 839
+LS A G+GI L A V+ + +NP +QA RAHR+GQK+ V V ++K T ++
Sbjct: 546 VLSITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADD 605
Query: 840 EVLERARKKM 849
+ ++K+
Sbjct: 606 VMWNMVQQKL 615
>Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 954
Score = 114 bits (286), Expect = 9e-25
Identities = 123/492 (25%), Positives = 215/492 (43%), Gaps = 75/492 (15%)
Query: 371 PKFEKLDAQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWL 430
P+ + + P + L FQ G+N F +K +LAD+MGLGKT+Q + ++
Sbjct: 421 PEADLSEVDPKLVSN--LMPFQRAGVN---FAIAKGGRLLLADDMGLGKTIQAICIAAFY 475
Query: 431 IYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAK 490
R+ P LVVVP S W++ F +W P L S D I N
Sbjct: 476 ----RKEWPLLVVVPSSVRFTWEQAFLRWLPSL----------SPDCI-------NVVVT 514
Query: 491 GKKHLKFNVL-LTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESS-LYESLNSFKVAN 548
GK L ++ + +++ + K L ++ + +DE+H LKN+ ++ ++ KVA
Sbjct: 515 GKDRLTAGLINIVSFDLLSKLEKQL-KTPFKVVIIDESHFLKNSRTARCRAAMPVLKVAK 573
Query: 549 R-LLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEY---------IRDL 598
R +L++GTP + EL + + P F D ++ + + +L
Sbjct: 574 RVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGEL 633
Query: 599 HKRLQPFI-LRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGH 657
L+ + LRRLK DV LP+K +I+ + I + +AL + K
Sbjct: 634 KLLLEEAVMLRRLKSDVLSQLPAKQRKIVVIAPG--------RINARTRAALDAAAK--E 683
Query: 658 VSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXX 717
++ + + +K + + AE ++ S E IL ++ SG
Sbjct: 684 MTTKDKTKQQQKDALILFFNRTAEAKIPSVI-------EYILD--LLESGR--------- 725
Query: 718 XXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDF 777
+ L+F+ +LD + L K + R+DG+ SA+R F + +
Sbjct: 726 ------EKFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERH-A 778
Query: 778 VFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTV 837
V +LS A +G+ +AD V+ + WNP +QA R HRIGQ + V ++ V+K T
Sbjct: 779 VAVLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTA 838
Query: 838 EEEVLERARKKM 849
++ + ++K+
Sbjct: 839 DDYLWPLIQEKI 850
>Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2492
Score = 108 bits (269), Expect = 9e-23
Identities = 73/254 (28%), Positives = 127/254 (49%), Gaps = 42/254 (16%)
Query: 723 GHRVLIFSQMVRILDILGDYLSI----------------------KGINFQRLDGTVPSA 760
G +VL+FSQ + LD++ D+L + + I++ RLDG+ +
Sbjct: 2034 GDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQ 2093
Query: 761 QRRISIDHFNAEDS-NDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHR 819
R+ + FN E + +F++ST+AG LGINL+ A+ VIIFD+ WNP D+Q++ R +R
Sbjct: 2094 SRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYR 2153
Query: 820 IGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGEL 879
GQ V VYRF+++ T+E+++ +R K L + ++ + + EL
Sbjct: 2154 FGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD---------QQQVERHFTMNEL 2204
Query: 880 SEILKFGAGNMFKPNDNQQKL-------EDLNLDEVLNHAEDHITTPELGESNLGGEEFL 932
+E+ F + PN ++K +D L E+L ++HI +S L +E
Sbjct: 2205 TELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKE-- 2262
Query: 933 RQFEVTDYKADVDW 946
+ E+T+ + W
Sbjct: 2263 -EEELTEEERKAAW 2275
Score = 103 bits (257), Expect = 2e-21
Identities = 161/704 (22%), Positives = 265/704 (36%), Gaps = 150/704 (21%)
Query: 26 ITHNTYAGLDSDSDEEVIRPRRGKQKRKAVKQEHNYDXXXXXXXXIDDFSDTDDFGSKRK 85
I N + D SD+E P GK++ +E+ D + SD+++ +K
Sbjct: 1280 IKANLSSDEDGSSDDE---PEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEE---SKK 1333
Query: 86 PTRAPSAKRGRKRVSAGNSKSKRQAKRVEESDEENVVLPTRFSSRNNNKVINYTLNDDSN 145
P R + VS G S +++ K E + + RN KV + +DS
Sbjct: 1334 PRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKG---------RNRRKVSS----EDSE 1380
Query: 146 DEDLMESSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSIDIVVDHRLKEGVDNSGSTK 205
D D ES ++ + D + + A Q ++ R+K D+S K
Sbjct: 1381 DSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYK-QKKKRRRIKVQEDSSSENK 1439
Query: 206 NRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEV 265
+ + + + E ++ E D ++ KG K+I I+ D ++
Sbjct: 1440 SNSEEEEEEKEEEE-----EEEEEEEEEEEDENDDSKSPGKGRKKIRK-----ILKDDKL 1489
Query: 266 RADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRL 325
R + ++ E E +RI E E ER E E ED S +
Sbjct: 1490 RTETQNALKEEE----ERRKRIAERER----EREKLREVIEIEDASPT------------ 1529
Query: 326 NYDECTWEVASEIVKMAPEQVKE--FQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFI 383
+C + +++V E+ KE Q N I
Sbjct: 1530 ---KCP--ITTKLVLDEDEETKEPLVQVHRNMVI-------------------------- 1558
Query: 384 KGGELRDFQLTGINWMAFLW------------SKNDNGILADEMGLGKTVQTVSFISWLI 431
+L+ Q+ G+ F+W S ILA MGLGKT+Q VSF+ ++
Sbjct: 1559 ---KLKPHQVDGVQ---FMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVL 1612
Query: 432 YARRQN-GPHLVVVPLSTMPAWQETFDKWAPGLNCVY-----------------YMGNQA 473
+ + LVV PL+T W F+KW GL YM +
Sbjct: 1613 LCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRW 1672
Query: 474 SRD---LIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRL 530
D +I YE Y N A+G+ ++K L + L D F+ DE H L
Sbjct: 1673 QEDGGVMIIGYEMYRN-LAQGR-NVKSRKLKEIFNKALVDPGP------DFVVCDEGHIL 1724
Query: 531 KNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQ 590
KN S++ +++NS + R+++TGTPLQNN+ E +VNF+ +E +
Sbjct: 1725 KNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPI 1784
Query: 591 QEEYIRD---------------LHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQT 635
Q D L++ L + R+ + K LP K E +L V ++ +Q
Sbjct: 1785 QNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQC 1844
Query: 636 EYYKNILTKNYSALTSGIKGGH----VSLLNVMNELKKASNHPY 675
+ Y+ L + + + + +GG L L + HP+
Sbjct: 1845 KLYQYYL-DHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPW 1887
>Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2288
Score = 108 bits (269), Expect = 9e-23
Identities = 73/254 (28%), Positives = 127/254 (49%), Gaps = 42/254 (16%)
Query: 723 GHRVLIFSQMVRILDILGDYLSI----------------------KGINFQRLDGTVPSA 760
G +VL+FSQ + LD++ D+L + + I++ RLDG+ +
Sbjct: 1830 GDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQ 1889
Query: 761 QRRISIDHFNAEDS-NDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHR 819
R+ + FN E + +F++ST+AG LGINL+ A+ VIIFD+ WNP D+Q++ R +R
Sbjct: 1890 SRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYR 1949
Query: 820 IGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGEL 879
GQ V VYRF+++ T+E+++ +R K L + ++ + + EL
Sbjct: 1950 FGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD---------QQQVERHFTMNEL 2000
Query: 880 SEILKFGAGNMFKPNDNQQKL-------EDLNLDEVLNHAEDHITTPELGESNLGGEEFL 932
+E+ F + PN ++K +D L E+L ++HI +S L +E
Sbjct: 2001 TELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKE-- 2058
Query: 933 RQFEVTDYKADVDW 946
+ E+T+ + W
Sbjct: 2059 -EEELTEEERKAAW 2071
Score = 103 bits (257), Expect = 2e-21
Identities = 161/704 (22%), Positives = 265/704 (36%), Gaps = 150/704 (21%)
Query: 26 ITHNTYAGLDSDSDEEVIRPRRGKQKRKAVKQEHNYDXXXXXXXXIDDFSDTDDFGSKRK 85
I N + D SD+E P GK++ +E+ D + SD+++ +K
Sbjct: 1076 IKANLSSDEDGSSDDE---PEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEE---SKK 1129
Query: 86 PTRAPSAKRGRKRVSAGNSKSKRQAKRVEESDEENVVLPTRFSSRNNNKVINYTLNDDSN 145
P R + VS G S +++ K E + + RN KV + +DS
Sbjct: 1130 PRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKG---------RNRRKVSS----EDSE 1176
Query: 146 DEDLMESSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSIDIVVDHRLKEGVDNSGSTK 205
D D ES ++ + D + + A Q ++ R+K D+S K
Sbjct: 1177 DSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYK-QKKKRRRIKVQEDSSSENK 1235
Query: 206 NRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEV 265
+ + + + E ++ E D ++ KG K+I I+ D ++
Sbjct: 1236 SNSEEEEEEKEEEE-----EEEEEEEEEEEDENDDSKSPGKGRKKIRK-----ILKDDKL 1285
Query: 266 RADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRL 325
R + ++ E E +RI E E ER E E ED S +
Sbjct: 1286 RTETQNALKEEE----ERRKRIAERER----EREKLREVIEIEDASPT------------ 1325
Query: 326 NYDECTWEVASEIVKMAPEQVKE--FQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFI 383
+C + +++V E+ KE Q N I
Sbjct: 1326 ---KCP--ITTKLVLDEDEETKEPLVQVHRNMVI-------------------------- 1354
Query: 384 KGGELRDFQLTGINWMAFLW------------SKNDNGILADEMGLGKTVQTVSFISWLI 431
+L+ Q+ G+ F+W S ILA MGLGKT+Q VSF+ ++
Sbjct: 1355 ---KLKPHQVDGVQ---FMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVL 1408
Query: 432 YARRQN-GPHLVVVPLSTMPAWQETFDKWAPGLNCVY-----------------YMGNQA 473
+ + LVV PL+T W F+KW GL YM +
Sbjct: 1409 LCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRW 1468
Query: 474 SRD---LIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRL 530
D +I YE Y N A+G+ ++K L + L D F+ DE H L
Sbjct: 1469 QEDGGVMIIGYEMYRN-LAQGR-NVKSRKLKEIFNKALVDPGP------DFVVCDEGHIL 1520
Query: 531 KNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQ 590
KN S++ +++NS + R+++TGTPLQNN+ E +VNF+ +E +
Sbjct: 1521 KNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPI 1580
Query: 591 QEEYIRD---------------LHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQT 635
Q D L++ L + R+ + K LP K E +L V ++ +Q
Sbjct: 1581 QNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQC 1640
Query: 636 EYYKNILTKNYSALTSGIKGGH----VSLLNVMNELKKASNHPY 675
+ Y+ L + + + + +GG L L + HP+
Sbjct: 1641 KLYQYYL-DHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPW 1683
>Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2454
Score = 108 bits (269), Expect = 9e-23
Identities = 73/254 (28%), Positives = 127/254 (49%), Gaps = 42/254 (16%)
Query: 723 GHRVLIFSQMVRILDILGDYLSI----------------------KGINFQRLDGTVPSA 760
G +VL+FSQ + LD++ D+L + + I++ RLDG+ +
Sbjct: 1996 GDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQ 2055
Query: 761 QRRISIDHFNAEDS-NDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHR 819
R+ + FN E + +F++ST+AG LGINL+ A+ VIIFD+ WNP D+Q++ R +R
Sbjct: 2056 SRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYR 2115
Query: 820 IGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGEL 879
GQ V VYRF+++ T+E+++ +R K L + ++ + + EL
Sbjct: 2116 FGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVD---------QQQVERHFTMNEL 2166
Query: 880 SEILKFGAGNMFKPNDNQQKL-------EDLNLDEVLNHAEDHITTPELGESNLGGEEFL 932
+E+ F + PN ++K +D L E+L ++HI +S L +E
Sbjct: 2167 TELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKE-- 2224
Query: 933 RQFEVTDYKADVDW 946
+ E+T+ + W
Sbjct: 2225 -EEELTEEERKAAW 2237
Score = 103 bits (257), Expect = 2e-21
Identities = 161/704 (22%), Positives = 265/704 (36%), Gaps = 150/704 (21%)
Query: 26 ITHNTYAGLDSDSDEEVIRPRRGKQKRKAVKQEHNYDXXXXXXXXIDDFSDTDDFGSKRK 85
I N + D SD+E P GK++ +E+ D + SD+++ +K
Sbjct: 1242 IKANLSSDEDGSSDDE---PEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEE---SKK 1295
Query: 86 PTRAPSAKRGRKRVSAGNSKSKRQAKRVEESDEENVVLPTRFSSRNNNKVINYTLNDDSN 145
P R + VS G S +++ K E + + RN KV + +DS
Sbjct: 1296 PRYRHRLLRHKLTVSDGESGEEKKTKPKEHKEVKG---------RNRRKVSS----EDSE 1342
Query: 146 DEDLMESSEEQDEGHNLDSEDMDLQDGYSASPSPQQETHSIDIVVDHRLKEGVDNSGSTK 205
D D ES ++ + D + + A Q ++ R+K D+S K
Sbjct: 1343 DSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYK-QKKKRRRIKVQEDSSSENK 1401
Query: 206 NRRWDVDSIRANFEFLIKWADQSHLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEV 265
+ + + + E ++ E D ++ KG K+I I+ D ++
Sbjct: 1402 SNSEEEEEEKEEEE-----EEEEEEEEEEEDENDDSKSPGKGRKKIRK-----ILKDDKL 1451
Query: 266 RADPYTTREDIEVMDLEHERRIDEFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRL 325
R + ++ E E +RI E E ER E E ED S +
Sbjct: 1452 RTETQNALKEEE----ERRKRIAERER----EREKLREVIEIEDASPT------------ 1491
Query: 326 NYDECTWEVASEIVKMAPEQVKE--FQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFI 383
+C + +++V E+ KE Q N I
Sbjct: 1492 ---KCP--ITTKLVLDEDEETKEPLVQVHRNMVI-------------------------- 1520
Query: 384 KGGELRDFQLTGINWMAFLW------------SKNDNGILADEMGLGKTVQTVSFISWLI 431
+L+ Q+ G+ F+W S ILA MGLGKT+Q VSF+ ++
Sbjct: 1521 ---KLKPHQVDGVQ---FMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVL 1574
Query: 432 YARRQN-GPHLVVVPLSTMPAWQETFDKWAPGLNCVY-----------------YMGNQA 473
+ + LVV PL+T W F+KW GL YM +
Sbjct: 1575 LCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRW 1634
Query: 474 SRD---LIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRL 530
D +I YE Y N A+G+ ++K L + L D F+ DE H L
Sbjct: 1635 QEDGGVMIIGYEMYRN-LAQGR-NVKSRKLKEIFNKALVDPGP------DFVVCDEGHIL 1686
Query: 531 KNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQ 590
KN S++ +++NS + R+++TGTPLQNN+ E +VNF+ +E +
Sbjct: 1687 KNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPI 1746
Query: 591 QEEYIRD---------------LHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQT 635
Q D L++ L + R+ + K LP K E +L V ++ +Q
Sbjct: 1747 QNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTSIQC 1806
Query: 636 EYYKNILTKNYSALTSGIKGGH----VSLLNVMNELKKASNHPY 675
+ Y+ L + + + + +GG L L + HP+
Sbjct: 1807 KLYQYYL-DHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPW 1849
>7298963 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1061
Score = 107 bits (267), Expect = 1e-22
Identities = 56/144 (38%), Positives = 89/144 (60%), Gaps = 5/144 (3%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
+ ++ SQ +LDIL D+LS G+ L+GT+P R+ ++ FN ++ V LLS
Sbjct: 910 KAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLT 969
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLER 844
AGG+G+NL+ A+ +++ D WNPQ + QA R +R+GQK +V++Y+F+ DTVE+ +
Sbjct: 970 AGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGL 1029
Query: 845 ARKKMILEYAIISLGVTDGNKISS 868
KK+ L + GV G K+SS
Sbjct: 1030 QDKKLDL-----ADGVLTGAKVSS 1048
Score = 81.6 bits (200), Expect = 9e-15
Identities = 89/372 (23%), Positives = 158/372 (41%), Gaps = 75/372 (20%)
Query: 325 LNYDECTWEVASEI--VKMAPEQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSF 382
L++DE + E +EI V + + F N+ + + P E L P
Sbjct: 376 LDWDELS-EAVNEIKPVYTGAQGMATFNNQKALTLESLKDLHVSLEDLPGPEVLAEDPVG 434
Query: 383 IKGGELRDFQLTGINWMAFLWSKNDNG-ILADEMGLGKTVQTVSFI-------------- 427
+K L + Q + WM++ K G ILAD+MGLGKT+ +S +
Sbjct: 435 LKVS-LMNHQKHALAWMSWRERKLPRGGILADDMGLGKTLTMISSVLACKNGQEMSEGKD 493
Query: 428 -------------------SWLIYARR--QNGPHLVVVPLSTMPAWQETFDKWAPGLN-- 464
W R+ + G LVV P S + W+ +
Sbjct: 494 ESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEVESKVSRQKLT 553
Query: 465 -CVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSI---KWQ 520
CV++ GN N + KGK +++++TTY+ + ++ +L ++ KW+
Sbjct: 554 VCVHH-GN--------------NRETKGKYLRDYDIVVTTYQIVAREHKSLSAVFGVKWR 598
Query: 521 FLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRF---- 576
+ +DEAH ++N +S ++ + R +TGTP+QN ++ AL+ FL F
Sbjct: 599 RIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSPFDDLH 658
Query: 577 TIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDVE-----KSLPSKTERILRVELS 631
T + ID ++ Q L+ ++ +LRR K ++ SLP+K R++ + L
Sbjct: 659 TWKKWIDNKSAGGQNR-----LNLLMKSLMLRRTKAQLQSDGKLNSLPNKELRLIEISLD 713
Query: 632 DVQTEYYKNILT 643
+ Y+ ++T
Sbjct: 714 KEEMNVYQTVMT 725
>At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 1178
Score = 107 bits (266), Expect = 2e-22
Identities = 139/552 (25%), Positives = 226/552 (40%), Gaps = 87/552 (15%)
Query: 388 LRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLS 447
L FQL G+ F + +ADEMGLGKT+Q ++ I G LVV P
Sbjct: 204 LLPFQLDGLR---FGLRRGGRCFIADEMGLGKTLQAIAIAGCFI----SEGSILVVCPAV 256
Query: 448 TMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYI 507
W E ++W P +C+ D+ + NP + V++ +Y+ +
Sbjct: 257 LRFTWAEELERWLP--SCL-------PSDVHLVFGHQDNPAYLPRWP---KVVVISYKML 304
Query: 508 LKDRSTLGSIKWQFLAVDEAHRLK--NAESSLYESLNSFKVANR----LLITGTP----- 556
R+T+ +W L VDE+H L+ +S E VA + +L++GTP
Sbjct: 305 QHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGTPSVSRP 364
Query: 557 --LQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRL-QPFILRRLKKD 613
L + E A + G Q F QD + + +L+ L Q ++RRLK+
Sbjct: 365 GLLGKDKYEFAK--TYCEVGLVRGIQGKIF--QDFSKGTRLLELNILLNQTVMIRRLKQH 420
Query: 614 VEKSLPSKTERILRVEL--SDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKAS 671
+ LP K +I+ + L SD+ A+ S K + + E
Sbjct: 421 LLTQLPPKRRQIVTILLKKSDIALAM----------AIVSEAKKQKDGAIAEVTEKSHEP 470
Query: 672 NHPYLFDNAEERVLSKFGDGHKS-RENILRGLIMSSGXXXXXXXXXXXXXX--------- 721
+ N V ++ DG S +EN L G +
Sbjct: 471 DQNARGSNEAGHVNAENSDGPNSDKENQLCGKLSYQQLGIAKLSAFREWLSLHPLLSGLD 530
Query: 722 ------DGHR----VLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNA 771
DG R +++F+ ++LD + +++ KGI F R+DGT R++++ F
Sbjct: 531 YTPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQF 590
Query: 772 EDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRF 831
S + ++ AGG+G++ A V+ + P LQA RAHR GQ + V VY F
Sbjct: 591 S-SEVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIF 649
Query: 832 VSKDTVEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMF 891
+KDT++E + KK+ + I S TDG T+ ++ G ++F
Sbjct: 650 CAKDTMDESNWQNLNKKL---HRISS--TTDGKYDGKTE------------IEIGGASIF 692
Query: 892 KPNDNQQKLEDL 903
KP + + E L
Sbjct: 693 KPAEESSEREVL 704
>SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2
and related ATPases (DNA/RNA helicase superfamily)
Length = 430
Score = 105 bits (262), Expect = 6e-22
Identities = 49/89 (55%), Positives = 66/89 (74%)
Query: 774 SNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVS 833
S+ ++F+LSTRAGGLG+NL TADTVIIFD+DWNP DLQA RAHRIGQ V + R ++
Sbjct: 4 SDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLIT 63
Query: 834 KDTVEEEVLERARKKMILEYAIISLGVTD 862
+ ++EE +L RA+ K+ L+ +I G D
Sbjct: 64 EKSIEENILSRAQYKLDLDGKVIQAGKFD 92
>At1g05480 [L] KOG0390 DNA repair protein SNF2 family
Length = 588
Score = 103 bits (257), Expect = 2e-21
Identities = 119/500 (23%), Positives = 205/500 (40%), Gaps = 66/500 (13%)
Query: 410 ILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWA-----PGLN 464
I++ G GKT T+ F+ + P +++ P S + W E F KW L+
Sbjct: 38 IMSHAPGTGKTRLTIIFLQAYLQCFPDCKP-VIIAPASLLLTWAEEFKKWNISIPFHNLS 96
Query: 465 CVYYMGNQASRDL---------------IQDYEFYTNPQAKGKKHLKFNVLLTTYEYILK 509
+ + G + S L I+ + Y+ ++K + +N+ +
Sbjct: 97 SLDFTGKENSAALGLLMQKNATARSNNEIRMVKIYSWIKSKSILGISYNLYEKLAGVKDE 156
Query: 510 DRST-----------LGSIKW------QFLAVDEAHRLKNAESSLYESLNSFKVANRLLI 552
D+ T L I+ L +DEAH +N S ++++L+ + R+L+
Sbjct: 157 DKKTKMVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILL 216
Query: 553 TGTPLQNNIKELAALVNFLMP------------GRFTIDQEIDFENQDEQQEEYIRDLHK 600
+GTP QNN EL ++ P T+ + +E I +L
Sbjct: 217 SGTPFQNNFLELCNVLGLARPKYLERLTSTLKKSGMTVTKRGKKNLGNEINNRGIEELKA 276
Query: 601 RLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSL 660
+ PF+ ++ SLP E ++ + ++Q ++I +T K +V
Sbjct: 277 VMLPFVHVHKGSILQSSLPGLRECVVVLNPPELQRRVLESI------EVTHNRKTKNV-- 328
Query: 661 LNVMNELKKASNHPYLFDNAE--ERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXX 718
++L S HP L + E+ + ++ +R S
Sbjct: 329 FETEHKLSLVSVHPSLVSRCKISEKERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVEL 388
Query: 719 XXXDGHRVLIFSQMVRILDILGDYLSIK-----GINFQRLDGTVPSAQRRISIDHFNAED 773
+VL+FSQ + L ++ +L + G + G + QR+ I+ FN
Sbjct: 389 CEVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPK 448
Query: 774 SNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVS 833
S VFL ST+A GI+L+ A VI+ D WNP + QA++RA+RIGQK V Y V+
Sbjct: 449 SKAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVA 508
Query: 834 KDTVE-EEVLERARKKMILE 852
K T E + ++A+K I E
Sbjct: 509 KGTPEGPKYCKQAQKDRISE 528
>CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1274
Score = 99.4 bits (246), Expect = 4e-20
Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 15/156 (9%)
Query: 723 GHRVLIFSQMVRILDILGDYLSIKGI--------------NFQRLDGTVPSAQRRISIDH 768
G ++LIFSQ + LD+L + L + I N+ RLDGT A R I+
Sbjct: 793 GEKILIFSQNLTALDMLEEILKKRQIRGKDGPGQRWEKNRNYLRLDGTTSGADREKLINR 852
Query: 769 FNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMV 828
FN+E +FL+STRAG LGINL++A+ II D+ WNP D QA+ R +R GQ+ V
Sbjct: 853 FNSEPGLS-LFLISTRAGSLGINLVSANRCIIIDACWNPCHDAQAVCRVYRYGQQKKTFV 911
Query: 829 YRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGN 864
YR + +++E + R K L+ ++ D N
Sbjct: 912 YRLIMDNSMERSIFNRQISKHGLQQRVVDDAQVDAN 947
Score = 53.5 bits (127), Expect = 2e-06
Identities = 36/135 (26%), Positives = 67/135 (48%), Gaps = 19/135 (14%)
Query: 525 DEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMP-----GRFTID 579
DE H++KN + + +L + R+++TG PLQNN+ E +++F+ P + ID
Sbjct: 463 DEGHKIKNITAEISMTLGAINTKRRIVLTGYPLQNNLLEYFCMIDFVRPKYLGTRKSFID 522
Query: 580 ---------QEIDFENQDEQ---QEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILR 627
Q +D D + Q ++ L + ++ F+ RR ++K LP E +L
Sbjct: 523 RFEKPIKNGQCVDSSPDDVKIALQRTHV--LVELVKGFVQRRTHHLLKKILPESKEYVLL 580
Query: 628 VELSDVQTEYYKNIL 642
+ S +Q + Y+N +
Sbjct: 581 LRKSQIQRQLYRNFV 595
>SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 897
Score = 98.6 bits (244), Expect = 7e-20
Identities = 55/149 (36%), Positives = 89/149 (58%), Gaps = 3/149 (2%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
++L++SQ + L ++ L ++ I R DGT+ + QR+ S+ FN D + V L+S +
Sbjct: 743 KILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFN-NDKDVLVMLVSLK 801
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLER 844
AG +G+NL A+ VI+ + +NP + QA+ R HR+GQ+ V VYRF++KDT+EE ++
Sbjct: 802 AGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITKDTIEERIVSV 861
Query: 845 ARKKMILEYAIISLGVTDGNKISSTKKNE 873
RKK L +L + N +S K E
Sbjct: 862 QRKKRQLVKE--ALDSNENNPLSRLDKEE 888
Score = 70.5 bits (171), Expect = 2e-11
Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 57/327 (17%)
Query: 392 QLTGINWMAFL-WSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGP----HLVVVPL 446
Q+ G WM + S G++AD+MGLGKT+QT++ L+ ++ P +L+VV +
Sbjct: 254 QVEGHAWMESMEQSSKCGGVMADDMGLGKTIQTIA----LLLTQKSQDPLRKTNLIVVSV 309
Query: 447 STMPAWQETFD-KWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYE 505
+ + W E K P Y+ + +++ + YE +++V+LTTY
Sbjct: 310 ALLHQWAEELSTKVHPSKKLSVYIHHGSTKKNLDSYELS-----------QYDVVLTTYS 358
Query: 506 ---YILKDRSTLGS----------------IKWQFLAVDEAHRLKNAESSLYESLNSFKV 546
Y +K + W + +DEAH ++N ++ +
Sbjct: 359 MLAYEMKQNDAFNNNNPATATPPPACSLLETSWYRIVLDEAHTIRNRDTLAAKCCVKLDA 418
Query: 547 ANRLLITGTPLQNNIKELAALVNFL------MPGRFTIDQEIDFEN-QDEQQEEYIRDLH 599
R ++GTP+QN+I E +L+ FL + F D ++ + + E ++ L
Sbjct: 419 KYRWCLSGTPIQNHIDEFYSLLKFLRIKPYCVWSLFAKDISRPLKSYRADIVEAALKRLR 478
Query: 600 KRLQPFILRRLKKDVEK-----SLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIK 654
L + RR K+ +LP KT R + V L + Y ++ S + +
Sbjct: 479 ILLASTVFRRTKETRVNNLPIVNLPPKTIRTVSVNLLPEERALYNEQMSSAQSLVDNYFN 538
Query: 655 GGH-----VSLLNVMNELKKASNHPYL 676
H LL + L++ HP+L
Sbjct: 539 NDHDLSRYGFLLVSLLRLRQFCCHPWL 565
>At2g21450 [L] KOG0390 DNA repair protein SNF2 family
Length = 816
Score = 98.6 bits (244), Expect = 7e-20
Identities = 133/541 (24%), Positives = 208/541 (37%), Gaps = 84/541 (15%)
Query: 387 ELRDFQLTGINWMAFLWSKNDNG--ILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVV 444
E+R Q G ++ + ++ G ILA G GKT +SF+ + Q P LVV+
Sbjct: 264 EMRPHQTEGFRFLCNNLAADEPGGCILAHAPGSGKTFLLISFLQSFMAMDPQARP-LVVL 322
Query: 445 PLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKF------- 497
P + +W+ F W + I +FY+ K+ LK
Sbjct: 323 PKGIIESWKREFTLWEV--------------EKIPLLDFYSVKAESRKQQLKVLGQWIKE 368
Query: 498 -NVLLTTYEYILK------------DRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSF 544
++L Y+ + D + K L +DE H +N E+ + SL
Sbjct: 369 RSILFLGYQQFTRIICDDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSLARV 428
Query: 545 KVANRLLITGTPLQNNIKELAALVNFLMP------------GRFTIDQEIDFENQDEQQE 592
K ++++TGT QNN++E+ +++ + P R EI Q Q
Sbjct: 429 KTRRKVVLTGTLFQNNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSS 488
Query: 593 EYIRDLHKRLQPFILRR-----LKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYS 647
I L+R K + K L T IL +D L S
Sbjct: 489 SSIEGTFFAAVELTLQRSTNFSAKASLIKDLREMTRNILHYHKADFSG------LLPGLS 542
Query: 648 ALT-----SGIKGGHVSLLNVMNELKKASN------HPYLFDNAEERVLSK---FGDGHK 693
T S I+ V L M K+ S HP L EE + F D +
Sbjct: 543 EFTVMLNLSSIQRDEVKGLRKMELFKQISLGAALYIHPKLKSFLEENPSNGEKGFSDNNT 602
Query: 694 S---RENILRGLIMSSGXXXXXXXXXXXX-XXDGHRVLIFSQMVRILDILGDYLS-IKGI 748
+ + +L+ + + G G ++L+FSQ + + L +S +KG
Sbjct: 603 TVMKLDKMLKKINVRDGVKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGW 662
Query: 749 NFQR----LDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSD 804
+ + G + QR S++ FN VF S +A G GI+L+ A V+I D
Sbjct: 663 RLGKEMFTITGDSSNEQREWSMERFN-NSLEAKVFFGSIKACGEGISLVGASRVLILDVH 721
Query: 805 WNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGN 864
NP QA+ARA+R GQK V Y+ V+ D+ EEE E +K ++ V G
Sbjct: 722 LNPSVTQQAVARAYRPGQKRKVYAYKLVAADSPEEENYETCTRKEMMSKMWFEWNVGSGR 781
Query: 865 K 865
+
Sbjct: 782 E 782
>7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 701
Score = 98.6 bits (244), Expect = 7e-20
Identities = 118/503 (23%), Positives = 209/503 (41%), Gaps = 77/503 (15%)
Query: 387 ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPL 446
+L FQ G+ F ++ ++ DEMGLGKT Q ++ + + + P LV
Sbjct: 246 QLMPFQQDGV---CFAIAQKGRIMICDEMGLGKTYQALAVADYF----KDDWPLLVCTTA 298
Query: 447 STMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEY 506
ST +W + P + Y ++ + + Y +AK VL+T+Y
Sbjct: 299 STRDSWAKHIMDLLPKVPIHYVQ-------VLNNNQLYVG-EAK--------VLITSYNM 342
Query: 507 ILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSF--KVANRLLITGTPLQNNIKEL 564
+ + L K+ F+ DE+H LKN+++ + + +L++GTP + EL
Sbjct: 343 MERHEDKLMQRKFGFIIFDESHTLKNSKAKCTTTAKRLTDQAKRVVLLSGTPALSRPLEL 402
Query: 565 AALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQ----------PFILRRLKKDV 614
+ ++ G+F E D +Q + D + + ++LRR K +V
Sbjct: 403 FTQLQ-MIDGKFMNFMEFTTRYCDGKQSTFGWDANGQSNLEELKVILHLKYMLRRTKVEV 461
Query: 615 EKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMN-ELKKASNH 673
L K + ++ + V T N TK L+ N ELK A
Sbjct: 462 LPQLAEKNRETVVLDPALVWT----NAETKE--------------TLDAFNKELKTAKGR 503
Query: 674 PYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXXXXXXXXXXXDGHRVLIFSQMV 733
A E +L +F ++ E R + + + +IF+
Sbjct: 504 ------ATEEILLRFYA--RTAEVKTRAVC----------AYLKTLVKEQKKFIIFAHHR 545
Query: 734 RILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLM 793
++D + D+LS +++ R+DG S R S+D F + S V LLS +A GI L
Sbjct: 546 VMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCK-VALLSLKACNSGITLT 604
Query: 794 TADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEY 853
A+ ++ + DWNP QA +RAHRIGQ V+ ++ +T ++ + + K +
Sbjct: 605 AAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNK---QE 661
Query: 854 AIISLGVTDGNKISSTKKNEPSA 876
+ +G+ N +T P++
Sbjct: 662 VLSKVGIFAENLQKATHTAAPTS 684
>At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1277
Score = 97.8 bits (242), Expect = 1e-19
Identities = 54/134 (40%), Positives = 78/134 (57%), Gaps = 2/134 (1%)
Query: 723 GHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLS 782
G + ++FSQ LD+L L +G F R DG + R + FN E + L+S
Sbjct: 1127 GEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFN-ETKQKTILLMS 1185
Query: 783 TRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVL 842
+AGG+G+NL A +V + D WNP + QA+ R HRIGQK V V RF+ KDTVEE +
Sbjct: 1186 LKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQ 1245
Query: 843 E-RARKKMILEYAI 855
+ +ARK+ ++ A+
Sbjct: 1246 QVQARKQRMIAGAL 1259
Score = 74.7 bits (182), Expect = 1e-12
Identities = 71/322 (22%), Positives = 135/322 (41%), Gaps = 71/322 (22%)
Query: 409 GILADEMGLGKTVQTVSFI-----------------------------SWLIYARRQNGP 439
GILAD MGLGKTV T++ I + + G
Sbjct: 683 GILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAKGG 742
Query: 440 HLVVVPLSTMPAWQETFDKWAPG--LNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKF 497
L++ P++ + W++ + + ++ + Y G + D K
Sbjct: 743 TLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHD--------------AKAIASH 788
Query: 498 NVLLTTYEYILKD------RSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLL 551
+V+LTTY + S I W + +DEAH +K+ ++ ++ R
Sbjct: 789 DVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWC 848
Query: 552 ITGTPLQNNIKELAALVNFLMP------GRFTIDQEIDFENQDEQQEEYIRDLHKRLQPF 605
+TGTPLQN +++L +L+ FL ++ + +EN D + + I+ + L+P
Sbjct: 849 LTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAI---LRPL 905
Query: 606 ILRRLKKDVEK------SLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHV- 658
+LRR K+ +K LP +++ E S+ + ++Y + ++ + G V
Sbjct: 906 MLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVL 965
Query: 659 ----SLLNVMNELKKASNHPYL 676
++L ++ L++ NHP+L
Sbjct: 966 HNYANILELLLRLRQCCNHPFL 987
>At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1029
Score = 97.8 bits (242), Expect = 1e-19
Identities = 54/130 (41%), Positives = 76/130 (57%), Gaps = 3/130 (2%)
Query: 723 GHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLS 782
G + ++FSQ LD+L LS +F RLDGT+ QR + F+ ED + V L+S
Sbjct: 879 GSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFS-EDGSILVLLMS 937
Query: 783 TRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEE--E 840
+AGG+GINL A + D WNP + QA+ R HRIGQ V + RF+ K TVEE E
Sbjct: 938 LKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERME 997
Query: 841 VLERARKKMI 850
++ +++MI
Sbjct: 998 AVQARKQRMI 1007
Score = 93.6 bits (231), Expect = 2e-18
Identities = 88/353 (24%), Positives = 155/353 (42%), Gaps = 88/353 (24%)
Query: 409 GILADEMGLGKTVQTVSFI---SW-----------------------------------L 430
GILAD MGLGKTV T+S + SW L
Sbjct: 415 GILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFL 474
Query: 431 IYARR--------QNGPHLVVVPLSTMPAWQETFDKWA-PGLNCVYYMGNQASRDLIQDY 481
+ +R QNG +L+V P++ + W+ + A PG VY
Sbjct: 475 GFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYV------------- 521
Query: 482 EFYTNPQAKGKKHL-KFNVLLTTYEYILK--------DRSTLGSIKWQFLAVDEAHRLKN 532
Y + K K L + +V++TTY + D + +++W + +DEAH +KN
Sbjct: 522 -HYGQSRPKDAKLLSQSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKN 580
Query: 533 AESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMP---GRFTIDQEIDFENQDE 589
++S + + + R +TGTP+QNN+++L +L+ FL G + ++ + +E
Sbjct: 581 SKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEE 640
Query: 590 QQEEYIRDLHKRLQPFILRRLKKDVEKS------LPSKTERILRVELSDVQTEYYKNILT 643
E ++ + L+P +LRR K ++ LP R++ ELS+ + ++Y +
Sbjct: 641 GDERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFK 700
Query: 644 KNYSALTSGIKGGHV-----SLLNVMNELKKASNHPYLF----DNAEERVLSK 687
++ ++ G V S+L ++ L++ +HP+L D AE L+K
Sbjct: 701 RSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNK 753
>Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1009
Score = 96.3 bits (238), Expect = 3e-19
Identities = 54/148 (36%), Positives = 79/148 (52%), Gaps = 1/148 (0%)
Query: 727 LIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHF-NAEDSNDFVFLLSTRA 785
L+ SQ L ++ L G F RLDG++ +R SI F N E + + LLS +A
Sbjct: 855 LVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKA 914
Query: 786 GGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERA 845
GG+G+NL A V + D WNP A+ Q R HR+GQK V++ +F+ KD+VEE +L+
Sbjct: 915 GGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQ 974
Query: 846 RKKMILEYAIISLGVTDGNKISSTKKNE 873
KK L + +++ K NE
Sbjct: 975 NKKRELAAGAFGTKKPNADEMKQAKINE 1002
Score = 79.0 bits (193), Expect = 6e-14
Identities = 74/286 (25%), Positives = 127/286 (43%), Gaps = 42/286 (14%)
Query: 441 LVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHL--KFN 498
L++ PLS + W + F G D+ ++ Y P + L K +
Sbjct: 479 LIICPLSVLSNWIDQF-------------GQHIKSDVHLNFYVYYGPDRIREPALLSKQD 525
Query: 499 VLLTTYEYILKDRSTLG-----SIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLIT 553
++LTTY + D T G SI+W + +DE H ++N + +++ + R ++T
Sbjct: 526 IVLTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLT 585
Query: 554 GTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQ----QEEYIRDLHKRLQPFILRR 609
GTP+QN++K+L +L++FL F ID+E E +R L ++ LRR
Sbjct: 586 GTPIQNSLKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRR 644
Query: 610 LKKDVEK-----SLPSKTERILRVELSDVQTEYYKNILTKNYSALTSG-------IKGGH 657
K K LP + I + LSD + + Y+++ KN T G + +
Sbjct: 645 TKTSKIKGKPVLELPERKVFIQHITLSDEERKIYQSV--KNEGRATIGRYFNEGTVLAHY 702
Query: 658 VSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLI 703
+L ++ L++ H YL NA V S G+ + E + + LI
Sbjct: 703 ADVLGLLLRLRQICCHTYLLTNA---VSSNGPSGNDTPEELRKKLI 745
>Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1359
Score = 96.3 bits (238), Expect = 3e-19
Identities = 51/145 (35%), Positives = 85/145 (58%), Gaps = 19/145 (13%)
Query: 723 GHRVLIFSQMVRILDILGDYLS------------------IKGINFQRLDGTVPSAQRRI 764
G ++L+FSQ + L ++ ++L ++ I++ RLDG+ P+ +R
Sbjct: 629 GDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVRNISYFRLDGSTPAFERER 688
Query: 765 SIDHFNAEDS-NDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQK 823
I+ FN + ++FLLSTRAG LG+NL+ A+ V++FD+ WNP D QA+ R +R GQK
Sbjct: 689 LINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQK 748
Query: 824 NHVMVYRFVSKDTVEEEVLERARKK 848
+YR V+ T+E+++ +R K
Sbjct: 749 KPCYIYRLVADYTLEKKIYDRQISK 773
Score = 69.7 bits (169), Expect = 3e-11
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 525 DEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQE--- 581
DE HR+KN ++S ++L + + R+++TG PLQNN+ E +V+F+ P QE
Sbjct: 355 DEGHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSN 414
Query: 582 -----------IDFENQDEQQEEY-IRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVE 629
ID QD + Y LH L+ F+ RR ++ LP+K E ++ V
Sbjct: 415 MFERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVR 474
Query: 630 LSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHP 674
LS +Q + Y + + +SG G ++ L K NHP
Sbjct: 475 LSKIQRDLYTQFMDRFRDCGSSGWLG--LNPLKAFCVCCKIWNHP 517
>At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 678
Score = 95.1 bits (235), Expect = 7e-19
Identities = 127/522 (24%), Positives = 210/522 (39%), Gaps = 110/522 (21%)
Query: 409 GILADEMGLGKTVQTVSFISWLIYARRQN---------GPHLVVVPLSTMPAWQETFDKW 459
GILADEMG+GKT+Q +S L+ ARR+ G LV+VP + W + +
Sbjct: 156 GILADEMGMGKTIQAIS----LVLARREVDRAKSREAVGHTLVLVPPVALSQWLDEISRL 211
Query: 460 -APGLNCVY-YMGNQASRDL--IQDYEFY--TNPQAKGKKH--------------LKFNV 499
+PG V Y G + +++ + +Y+F T+P + + +K+N
Sbjct: 212 TSPGSTRVLQYHGPKRDKNVQKLMNYDFVLTTSPIVENEYRKDEGVDETMSPLHSIKWNR 271
Query: 500 LLTTYEYILKDRSTLGSIKWQFLAVDEAHR-------LKNAESSLYESLNSFKVANRLLI 552
++ + +K+RS+ + K F A++ +R L+N LY SL S+ N
Sbjct: 272 IIVDEAHDIKNRSSR-TAKAVF-ALEATYRWALSGTPLQNDVDELY-SLVSYSFLNFFYS 328
Query: 553 TGTPLQNNIKELA----ALVNFLMPGRFT-IDQEIDFENQDEQQEEYIRDLHKRLQPFIL 607
T + V FL+ G + + EN +
Sbjct: 329 TYASFAFRHTHITFARNVTVKFLIGGNILPLSIPVRIEN-------------------VP 369
Query: 608 RRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSG-IKGGHVSLLNVMNE 666
L + SL K L V +D YK T + +G + + + ++
Sbjct: 370 AVLIMQINTSLGGKRRDALSVVEADFYESLYKVSKTTFDGYIQAGTLMNNYAHIFGLLIR 429
Query: 667 LKKASNHPYLFD--------------NAEERVLSKFGDG-----------HKSRENILRG 701
L++A +HPYL N E+ FG H++ + L+G
Sbjct: 430 LRQAVDHPYLVSYSSPSGANANLLDANKNEKECG-FGHDPSKDYFVTSSEHQASKTKLKG 488
Query: 702 LIMSSGXXXXXXXXXXXXXXD---------------GHRVLIFSQMVRILDILGDYLSIK 746
SS + ++FSQ LD++ L
Sbjct: 489 FRASSILNRINLDDFKTSTKIEALREEIRFMVERDWSAKAIVFSQFTSFLDLISYALGKS 548
Query: 747 GINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWN 806
G++ +L G++ A + ++ +F E+ + V L+S +AGG+ +NL A V + D WN
Sbjct: 549 GVSCVQLVGSMSKAAKDAALKNFK-EEPDCRVLLMSLQAGGVALNLTAASHVFMMDPWWN 607
Query: 807 PQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKK 848
P + QA R HRIGQ V V RF+ + TVEE++L +KK
Sbjct: 608 PAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQKKK 649
>SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 830
Score = 94.7 bits (234), Expect = 1e-18
Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 5/147 (3%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
+ +IFSQ LDI+ +L GI F R DG + + R S+D + DS V L S +
Sbjct: 672 KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRS-DSGTQVLLCSLK 730
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLER 844
G LG+NL A VI+ D WNP + QA+ R HRIGQ+ V+VY+ V ++T+EE+++E
Sbjct: 731 CGALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVEL 790
Query: 845 ARKKMILEYAIISLGVTDGNKISSTKK 871
K + A +LG DG K T K
Sbjct: 791 QNLKR--DLAKQALG--DGKKSVFTSK 813
Score = 93.6 bits (231), Expect = 2e-18
Identities = 94/346 (27%), Positives = 156/346 (44%), Gaps = 50/346 (14%)
Query: 372 KFEKLDAQPSFIKGGELR--DFQLTGINWM----AFLWSKNDNGILADEMGLGKTVQTVS 425
K + + Q SFI G +R D Q+ G+ W+ S GILAD+MGLGKT+Q ++
Sbjct: 215 KDDSMQRQSSFIPGMHIRLLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIA 274
Query: 426 FISWLIYARRQNG--PHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASR----DLIQ 479
I ++++ LVV PLS + W+ + L + Y G ASR +I
Sbjct: 275 LILSHPLPKKKHSIKSTLVVAPLSLIKQWESEVQTKSK-LTAIVYHG--ASRYKLLKVIH 331
Query: 480 DYEFY-TNPQAKGKKHLKFNVLLT---------TYEYILKDRSTLGSIKWQFLAVDEAHR 529
+Y+ T Q + + N T +YE K + +L + W + +DEAH
Sbjct: 332 EYDVVITTYQILVSEWVSHNTTGTDGKSPTEAKSYE---KKKPSLFAFYWWRIILDEAHT 388
Query: 530 LKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQ-----EIDF 584
+KN S + + + NR +TGTPLQNN+ EL +LV FL F DQ +I
Sbjct: 389 IKNKSSKSALACCALQGINRWCLTGTPLQNNVDELYSLVKFLHINPFN-DQSVWKDQISL 447
Query: 585 ENQDEQQEEYIRDLHKRLQPFILRRLKKDVEK---------SLPSKTERILRV--ELSDV 633
++ + L L +LRR K +E +L + +V + +
Sbjct: 448 PLCQGEENLVFKRLRMLLSVIMLRRTKTLLEANAGKDGTGGALKLSKRLVYKVICKFEES 507
Query: 634 QTEYYKNILTKNYSALTSGIKGG-----HVSLLNVMNELKKASNHP 674
+ ++Y N+ +++ + G + ++L ++ L++A NHP
Sbjct: 508 ERDFYSNLARNMERTMSNFVNSGKLGKNYTNILCLLLRLRQACNHP 553
>At2g16390 [L] KOG0390 DNA repair protein SNF2 family
Length = 888
Score = 94.0 bits (232), Expect = 2e-18
Identities = 117/507 (23%), Positives = 213/507 (41%), Gaps = 55/507 (10%)
Query: 387 ELRDFQLTGINWMAFLWSKNDNG--ILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVV 444
E++ Q+ G ++ +D G I+A G GKT +SF+ + Q P LVV+
Sbjct: 349 EMKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKP-LVVL 407
Query: 445 PLSTMPAWQETFDKWA----PGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVL 500
P +P W++ F +W P L+ ++ L ++ + +F+ +
Sbjct: 408 PKGILPTWKKEFVRWQVEDIPLLDFYSAKAENRAQQLSILKQWMEKKSILFLGYQQFSTI 467
Query: 501 --------LTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLI 552
L+ E +LK S L +DE H +N +++L +SL + ++++
Sbjct: 468 VCDDTTDSLSCQEILLKVPS--------ILILDEGHTPRNEDTNLLQSLAQVQTPRKVVL 519
Query: 553 TGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIR-DLHKRL---QPFILR 608
+GT QN++KE+ ++N + P +D ++ ++ Y D+ RL +
Sbjct: 520 SGTLYQNHVKEVFNILNLVRPKFLKLDTS---KSAVKRILAYTPCDVRGRLTGSNSDMAS 576
Query: 609 RLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKG--GHVSLLNV--- 663
+ VE +L + +++++ E K +L + G +LN+
Sbjct: 577 MFNETVEHTLQKSEDFTVKIKVIQDLREMTKKVLHYYKGDFLDELPGLADFTVVLNLSPK 636
Query: 664 -MNELKKASNHPYLFD----------NAEERVLSKFGD--GHKSRENILRGLIMSSGXXX 710
+NE+KK F + + +V S D + + ++ L ++ G
Sbjct: 637 QLNEVKKLRREKRKFKVSAVGSAIYLHPKLKVFSDKSDDVSDTTMDEMVEKLDLNEGVKA 696
Query: 711 XXXXXXXXXXXD-GHRVLIFSQMVRILDILGDYLSI-KGINFQR----LDGTVPSAQRRI 764
G ++L+FSQ + L L ++ KG + L G S QR
Sbjct: 697 KFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSEQREW 756
Query: 765 SIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKN 824
S++ FN+ +F S +A G GI+L+ A ++I D NP QA+ RA R GQK
Sbjct: 757 SMETFNSSPDAK-IFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPGQKK 815
Query: 825 HVMVYRFVSKDTVEEEVLERARKKMIL 851
V YR ++ + EEE KK ++
Sbjct: 816 MVHAYRLIAGSSPEEEDHNTCFKKEVI 842
>Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 619
Score = 92.4 bits (228), Expect = 5e-18
Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 379 QPSFIKGG-ELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQN 437
QPS + L+ +Q G+NW+A + NGILADEMGLGKT+Q ++F+++L Y N
Sbjct: 487 QPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYL-YQEGNN 545
Query: 438 GPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQ 479
GPHL+VVP ST+ W + W P L + Y G+Q R I+
Sbjct: 546 GPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR 587
>At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1287
Score = 92.4 bits (228), Expect = 5e-18
Identities = 50/129 (38%), Positives = 77/129 (58%), Gaps = 1/129 (0%)
Query: 723 GHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLS 782
G + ++FSQ ++L++L L I ++RLDGT+ A R ++ FN V ++S
Sbjct: 1130 GEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVT-VMIMS 1188
Query: 783 TRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVL 842
+A LG+N++ A V++ D WNP + QA+ RAHRIGQ V V RF KDTVE+ +L
Sbjct: 1189 LKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRIL 1248
Query: 843 ERARKKMIL 851
+KK ++
Sbjct: 1249 ALQQKKRMM 1257
>At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1227
Score = 92.0 bits (227), Expect = 6e-18
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Query: 723 GHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLS 782
G + ++F+Q ++LD+L L GI ++R DG + R ++ FN V ++S
Sbjct: 1072 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVS-VMIMS 1130
Query: 783 TRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVL 842
+A LG+N++ A VI+ D WNP + QA+ RAHRIGQ V V RF KDTVE+ +L
Sbjct: 1131 LKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRIL 1190
Query: 843 ERARKK 848
+KK
Sbjct: 1191 ALQQKK 1196
Score = 67.4 bits (163), Expect = 2e-10
Identities = 82/367 (22%), Positives = 143/367 (38%), Gaps = 86/367 (23%)
Query: 380 PSFIKGGELRDFQLTGINWMAFLWSKND---NGILADEMGLGKTVQTVSFI--------- 427
P + L Q ++WM+ + + GILAD+ GLGKTV T++ I
Sbjct: 534 PDGVLAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYL 593
Query: 428 ----------------SWLIYAR-------------RQNGPHLVVVPLSTMPAWQETFDK 458
S +++ R L+V P S M W + K
Sbjct: 594 PCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRK 653
Query: 459 WAP---GLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDR---- 511
L+ + Y G ++D + K++V++TTY + K +
Sbjct: 654 KVTLEAHLSVLVYHGCSRTKD--------------PHELAKYDVVITTYSLVSKRKHMDC 699
Query: 512 -------STLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKEL 564
L + W + +DEA +KN ++ + + R ++GTP+QN+I +L
Sbjct: 700 EPVEFLSGPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADL 759
Query: 565 AALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFI----LRRLKKDVEK---- 616
+ FL ++ Q E Y + +K LQ + LRR K +
Sbjct: 760 YSYFRFLKYDPYSSYQTF-CETIKNPISSYPGEGYKTLQAILKKVMLRRTKDTLLDGKPV 818
Query: 617 -SLPSKTERILRVELSDVQTEYYKNI------LTKNYSALTSGIKGGHVSLLNVMNELKK 669
SLP K+ + RV+ + + ++Y + K Y A +K +V++L ++ L++
Sbjct: 819 ISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEY-AEAGTVKQNYVNILLMLLRLRQ 877
Query: 670 ASNHPYL 676
A HP L
Sbjct: 878 ACGHPLL 884
>7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1311
Score = 91.7 bits (226), Expect = 8e-18
Identities = 54/157 (34%), Positives = 82/157 (51%), Gaps = 23/157 (14%)
Query: 723 GHRVLIFSQMVRILDILGDYLSI----------------------KGINFQRLDGTVPSA 760
G ++L+FSQ ++ LD++ +LS+ G ++ RLDG+
Sbjct: 914 GDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVE 973
Query: 761 QRRISIDHFN-AEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHR 819
QR FN + +FL+STRAGGLGINL+ A+ V+IFD WNP D Q++ R +R
Sbjct: 974 QREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYR 1033
Query: 820 IGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAII 856
GQ +YR ++ T+E++V ER K +I
Sbjct: 1034 FGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVI 1070
Score = 87.8 bits (216), Expect = 1e-16
Identities = 85/317 (26%), Positives = 135/317 (41%), Gaps = 49/317 (15%)
Query: 410 ILADEMGLGKTVQTVSFISWLIYARRQNGPH--LVVVPLSTMPAWQETFDKWAPGLNCVY 467
ILA MGLGKT+Q V+ L+ R+ G L++ PLST+ W F W
Sbjct: 486 ILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSWM------- 538
Query: 468 YMGNQASRDLIQDYE---FYTNPQAKGKKHLKFN---VLLTTYEY--ILKDRSTLGSIKW 519
A+R+ I+ Y+ + P K + FN V + Y+ IL + G K
Sbjct: 539 ---KFANRNDIEVYDISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRKK 595
Query: 520 Q--------------FLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELA 565
Q + DE H LKN ++S+ +++ + R+++TGTPLQNN++E
Sbjct: 596 QREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYY 655
Query: 566 ALVNFLMP----------GRF----TIDQEIDFENQD-EQQEEYIRDLHKRLQPFILRRL 610
++ F+ P RF T Q D +D + LHK L+ I RR
Sbjct: 656 CMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRD 715
Query: 611 KKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNELKKA 670
+ LP K E ++ LS++Q + Y +T + + G L +L++
Sbjct: 716 YSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTHREQSGGDVVGKGARLFQDFQDLRRI 775
Query: 671 SNHPYLFDNAEERVLSK 687
HP + V++K
Sbjct: 776 WTHPMNLRVNSDNVIAK 792
>At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1047
Score = 90.9 bits (224), Expect = 1e-17
Identities = 51/124 (41%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
+ +IFSQ +LD++ + GI F+RLDGT+ A R ++ F+ + V L+S +
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVK-VMLMSLK 952
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLER 844
AG LG+N++ A VI+ D WNP + QA+ RAHRIGQ V V R KDTVE+ +L+
Sbjct: 953 AGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKL 1012
Query: 845 ARKK 848
+K
Sbjct: 1013 QEEK 1016
Score = 55.1 bits (131), Expect = 9e-07
Identities = 43/181 (23%), Positives = 81/181 (43%), Gaps = 15/181 (8%)
Query: 510 DRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVN 569
D LG + W + +DEA +KN + + S + + R ++GTP+QN I +L +
Sbjct: 533 DCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFR 592
Query: 570 FLMPGRFTIDQE----IDFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEK-----SLPS 620
FL + + + I + Y + L L+ +LRR K + +LP
Sbjct: 593 FLRYDPYAVYKSFYSTIKVPISRNSCQGY-KKLQAVLRAIMLRRTKGTLLDGKPIINLPP 651
Query: 621 KTERILRVELSDVQTEYYKNILTKNYSALTSGIKGG-----HVSLLNVMNELKKASNHPY 675
K + +V+ S + +YK + + S + G + ++L ++ L++A +HP
Sbjct: 652 KVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQ 711
Query: 676 L 676
L
Sbjct: 712 L 712
>SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1040
Score = 90.5 bits (223), Expect = 2e-17
Identities = 52/145 (35%), Positives = 88/145 (59%), Gaps = 2/145 (1%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
++LIFSQ V L++ +GI + G + +A+R ++ +F D N V L+S +
Sbjct: 885 KILIFSQFVSFLELFTVPFRQEGIKYLMYTGGLSTAERNQALINFEV-DPNVRVLLISLK 943
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLE- 843
AG +G+NL A+ VII D WNP + QA+ RAHRIGQ V + R V+ +T+EE VL
Sbjct: 944 AGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEERVLAL 1003
Query: 844 RARKKMILEYAIISLGVTDGNKISS 868
+ RK+ +++ A+ G+ + +++++
Sbjct: 1004 QDRKRELIDSALGEKGLREISRLNT 1028
Score = 75.1 bits (183), Expect = 8e-13
Identities = 78/336 (23%), Positives = 139/336 (41%), Gaps = 51/336 (15%)
Query: 388 LRDFQLTGINWMAFLW-SKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPL 446
L + Q G+ W+ L S GILAD+MGLGKTVQ ++ + + L++ P+
Sbjct: 390 LMEHQKEGLMWLKRLEESSKKGGILADDMGLGKTVQALALLVTRPPESKSVKTTLIITPV 449
Query: 447 STMPAWQ-ETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYE 505
S + W E K AP Y+ + +S+ ++ + ++++LTTY
Sbjct: 450 SLLQQWHNEILTKIAPSHRPTVYIHHGSSKK-----------HKIAEQLMSYDIVLTTYN 498
Query: 506 YI-------------LKDRSTLGSIK--------WQFLAVDEAHRLKNAESSLYESLNSF 544
I ++D + + + W + +DEA +KN +
Sbjct: 499 VIAYEFKNKMAYDKSIEDNAPIKKFEHLPFFEAEWYRVILDEAQTIKNRNTLAARGCCLL 558
Query: 545 KVANRLLITGTPLQNNIKELAALVNFLMP------GRFTIDQEIDFENQDEQQEEYIRDL 598
+ R ++GTP+QN ++E +L+ FL F+ D I + ++
Sbjct: 559 ESTYRWCLSGTPMQNGVEEFYSLIKFLRIKPYSDWSSFSKDFTIPLSSNINTSAP-MKRF 617
Query: 599 HKRLQPFILRRLKKDVEK-----SLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGI 653
L+ +LRR K +LP KT +LS + E+Y + + + +
Sbjct: 618 RGLLKAVLLRRTKNTKIDGKPILTLPPKTAVKSETDLSSSEMEFYNTLQSGAQIQMRKYL 677
Query: 654 KGGHV-----SLLNVMNELKKASNHPYLFDNAEERV 684
+ G + SLL ++ L++A HP+L E V
Sbjct: 678 QEGTITTHYGSLLVLLLRLRQACCHPWLIVAREAAV 713
>YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 790
Score = 90.1 bits (222), Expect = 2e-17
Identities = 82/344 (23%), Positives = 152/344 (43%), Gaps = 61/344 (17%)
Query: 387 ELRDFQLTGINWMAFLWSKNDN----GILADEMGLGKTVQTVSFISWLIYARRQNGPHLV 442
+L FQL G++W+ S+ ++ G+LADEMG+GKT+QT++ L+ P LV
Sbjct: 183 KLLPFQLEGLHWLI---SQEESIYAGGVLADEMGMGKTIQTIA----LLMNDLTKSPSLV 235
Query: 443 VVPLSTMPAWQETFDKWAPGLNCVY-YMGNQASRDL--IQDYEFYTNPQAKGKKHL-KFN 498
V P + W+ ++ G +Y Y G + D+ +Q Y+ A + K N
Sbjct: 236 VAPTVALMQWKNEIEQHTKGQLKIYIYHGASRTTDIKDLQGYDVVLTTYAVLESVFRKQN 295
Query: 499 VLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQ 558
+ K S L +I + + +DEAH +K+ +S+ ++N+ K R ++GTPLQ
Sbjct: 296 YGFRRKNGLFKQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVNNLKTQKRWCLSGTPLQ 355
Query: 559 NNIKELAALVNFLMPGRFT----------------------------IDQEIDFENQ--- 587
N I E+ +L+ FL FT I Q +F N
Sbjct: 356 NRIGEMYSLIRFLNINPFTKYFCTKCDCASKDWKFTDRMHCDHCSHVIMQHTNFFNHFML 415
Query: 588 --------DEQQEEYIRDLHKRLQPFILRRLK--KDVEKSLPSKTERILRVELSDVQTEY 637
+ E ++ L+ +LRR K + + LP + + R ++ + +
Sbjct: 416 KNIQKFGVEGPGLESFNNIQTLLKNIMLRRTKVERADDLGLPPRIVTVRRDFFNEEEKDL 475
Query: 638 YKNILTKNYSALTSGIKGG-----HVSLLNVMNELKKASNHPYL 676
Y+++ T + S ++ G + ++ ++ +++ ++HP L
Sbjct: 476 YRSLYTDSKRKYNSFVEEGVVLNNYANIFTLITRMRQLADHPDL 519
Score = 80.9 bits (198), Expect = 1e-14
Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Query: 727 LIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAG 786
++FSQ +LD++ L G +L G++ QR +I +F + VFL+S +AG
Sbjct: 641 IVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCE-VFLVSLKAG 699
Query: 787 GLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERAR 846
G+ +NL A V I D WNP + Q+ R HRIGQ V + RF +D++E ++E
Sbjct: 700 GVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKITRFCIEDSIEARIIELQE 759
Query: 847 KKMILEYAIIS 857
KK + +A I+
Sbjct: 760 KKANMIHATIN 770
>At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 881
Score = 89.7 bits (221), Expect = 3e-17
Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Query: 727 LIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHF-NAEDSNDFVFLLSTRA 785
++FSQ ++L +L L G RLDG + +R I F N E + V L S +A
Sbjct: 729 VVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKA 788
Query: 786 GGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERA 845
G GINL A V +FD WNP + QAM R HRIGQK V + R ++++++EE VLE
Sbjct: 789 SGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQ 848
Query: 846 RKK 848
+KK
Sbjct: 849 QKK 851
Score = 68.6 bits (166), Expect = 8e-11
Identities = 71/290 (24%), Positives = 119/290 (40%), Gaps = 71/290 (24%)
Query: 409 GILADEMGLGKTVQTVSFISWLIYA------------------------RRQNGPH---- 440
G+ AD+MGLGKT+ +S I++ Y +R G
Sbjct: 281 GVFADDMGLGKTLTLLSLIAFDRYGNASTSTPTEEPLDGEGDKIEKKGKKRGRGKSSESV 340
Query: 441 --------------------LVVVPLSTMPAWQETFDKWA-PGLNCVY-YMGNQASRDLI 478
L+V P S + AW ++ PG+ VY Y G + + D+
Sbjct: 341 TRKKLKTDDVVGMNVSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDV- 399
Query: 479 QDYEFYTNPQAKGKKHLKFNVLLTTYEYILKDRSTLGS----IKWQFLAVDEAHRLKNAE 534
+ +K++++LTTY + + S S ++W + +DEAH +KNA
Sbjct: 400 -------------NELMKYDIVLTTYGTLAVEESWEDSPVKKMEWLRIILDEAHTIKNAN 446
Query: 535 SSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTID---QEIDFENQDEQQ 591
+ + K + R +TGTP+QN +L +L+ FL F+I Q + +
Sbjct: 447 AQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGN 506
Query: 592 EEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNI 641
++ + L + LRR K+ LP KT VELS + + Y ++
Sbjct: 507 KKGLSRLQVLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHM 556
>At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 833
Score = 89.7 bits (221), Expect = 3e-17
Identities = 48/127 (37%), Positives = 75/127 (58%), Gaps = 1/127 (0%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
+ ++FSQ LD++ L G++ +L G++ A R +I+ F ED + VFL+S +
Sbjct: 682 KAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFK-EDPDCRVFLMSLK 740
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLER 844
AGG+ +NL A V + D WNP + QA R HRIGQ + V RF+ ++TVEE +L
Sbjct: 741 AGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRL 800
Query: 845 ARKKMIL 851
+KK ++
Sbjct: 801 QKKKELV 807
Score = 62.8 bits (151), Expect = 4e-09
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 45/213 (21%)
Query: 509 KDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALV 568
K++S L S+KW + +DEAH +K S+ ++ + + R ++GTPLQN + EL +L+
Sbjct: 344 KEKSLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLI 403
Query: 569 NFLM--PGRFTIDQEIDFENQDEQQEE--------------------------------- 593
FL P + ++ D D +
Sbjct: 404 RFLQIRPYSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNKYVAKPITVYGSFGLG 463
Query: 594 ---YIRDLHKRLQPFILRRLK--KDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSA 648
I HK L+ +LRR K + + +LP + + R L + +YY+++ + +
Sbjct: 464 KRAMILLKHKVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKEFDYYESLYKNSQAE 523
Query: 649 LTSGIKGG-----HVSLLNVMNELKKASNHPYL 676
+ I+ G + + +++ L++A +HPYL
Sbjct: 524 FNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYL 556
>CE11083 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1091
Score = 89.0 bits (219), Expect = 5e-17
Identities = 47/147 (31%), Positives = 79/147 (52%), Gaps = 5/147 (3%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
+V+I SQ +L+++ ++ G + + G V R+ +D FN E V LLS
Sbjct: 935 KVVIVSQWTSVLNLIEIHIKSSGFKYTSITGQVLVKDRQERVDSFNREKGGARVMLLSLA 994
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLER 844
AGG+G+NL + +++ D WNP + QA R +R+GQK V ++R V+K T+E+ V+
Sbjct: 995 AGGVGLNLTGGNHLVMVDLHWNPALEQQAFDRIYRMGQKKDVFIHRLVTKGTIEQRVVML 1054
Query: 845 ARKKMILEYAIISLGVTDGNKISSTKK 871
+ K+ L +++ DGN K
Sbjct: 1055 QKDKVALASSVL-----DGNATRKMNK 1076
Score = 71.6 bits (174), Expect = 9e-12
Identities = 64/255 (25%), Positives = 103/255 (40%), Gaps = 74/255 (29%)
Query: 387 ELRDFQLTGINWMAFLWSK-NDNGILADEMGLGKTVQTVSFISWLIYARR---------- 435
EL Q G+ WM + ++ GILAD+MGLGKT+ +S I+ ARR
Sbjct: 470 ELMPHQKAGLTWMRWRETQPQPGGILADDMGLGKTLSMISLIAHQKAARRARREDGNDDK 529
Query: 436 ---------------QNGPHLVVVPLSTMPAWQETFDKWAPG--LNCVYYMGNQASRDLI 478
NG L+V P S + W D+ L+ + G + RD+
Sbjct: 530 DKEKRKVVKEQGLIPSNGT-LIVAPASLIHQWDAEIDRRLDDSVLSTYMFHGTKKQRDI- 587
Query: 479 QDYEFYTNPQAKGKKHLKFNVLLTTYEYIL------------------------------ 508
++ +++V++TT+ I
Sbjct: 588 -----------DARRLARYDVVITTFNLIANELIEKIRTKSKADDSSDGESDSNHTGIRR 636
Query: 509 ---KDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELA 565
KD S L I W + +DEAH +KN +S +++ +R ++GTP+ NN+ +L
Sbjct: 637 AVGKDDSVLAQICWSRVILDEAHTIKNRQSLASKAVCRLSAFSRWCLSGTPIHNNLWDLY 696
Query: 566 ALVNFLMPGRFTIDQ 580
+LV FL F+ D+
Sbjct: 697 SLVRFLRIRPFSDDK 711
>At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1056
Score = 87.0 bits (214), Expect = 2e-16
Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 3/128 (2%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
+ +IFSQ +LD++ L I F+RLDGT+ R ++ F+ D + V ++S +
Sbjct: 903 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFS-NDPDVKVMIMSLK 961
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEV--L 842
AG LG+N++ A VI+ D WNP + QA+ RAHRIGQ V V R K+TVE+ + L
Sbjct: 962 AGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILAL 1021
Query: 843 ERARKKMI 850
+ ++KM+
Sbjct: 1022 QEEKRKMV 1029
Score = 53.9 bits (128), Expect = 2e-06
Identities = 40/180 (22%), Positives = 81/180 (44%), Gaps = 13/180 (7%)
Query: 510 DRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVN 569
D TL + W + +DEA +KN + + + + R ++GTP+QN I +L +
Sbjct: 537 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFR 596
Query: 570 FLMPGRFTIDQEIDFENQ---DEQQEEYIRDLHKRLQPFILRRLKKDVEK-----SLPSK 621
FL + + + + + + + L L+ +LRR K + +LP K
Sbjct: 597 FLKYDPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIINLPPK 656
Query: 622 TERILRVELSDVQTEYYKNILTKNYS-----ALTSGIKGGHVSLLNVMNELKKASNHPYL 676
T + +V+ S + +Y + + + S A + + ++L ++ L++A +HP L
Sbjct: 657 TINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQL 716
>SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 963
Score = 86.3 bits (212), Expect = 3e-16
Identities = 91/366 (24%), Positives = 160/366 (42%), Gaps = 75/366 (20%)
Query: 250 RIENYYKQFIILDQEVRADPYTTREDIE------VMDLEHERRIDEFEEFKVPERIIDSE 303
R N K+F+ L ++ +D E ++D++ + D + ++PE S
Sbjct: 217 RSSNLKKKFVPLSSPEESNESEFIDDDESDEVASIIDIKEDETFDS--KVEIPEAAPSSS 274
Query: 304 RFENEDGSGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPEQVKEFQNRTNSKIMPQNSS 363
+E+ S L Y K RR++ + +S +RT +K +P +
Sbjct: 275 TESDEE---SIPLSYQSKRRRVSARASSSASSS--------------SRTQAKSIPSHER 317
Query: 364 NYPA--NQRPK----FEKLDAQ-PSFIKGGE--------LRDFQLTGINWMAFLWSKN-D 407
+ Q P+ +EKL+ + P +K E L FQ G+ W+ +
Sbjct: 318 THYRLIRQHPELEHVWEKLEEEAPREVKQIEQPKELVLNLLPFQREGVYWLKRQEDSSFG 377
Query: 408 NGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVY 467
GILADEMG+GKT+QT++ L+ + + P LVV P+ + W+E D Y
Sbjct: 378 GGILADEMGMGKTIQTIA----LLLSEPRGKPTLVVAPVVAIMQWKEEIDTHTNKALSTY 433
Query: 468 YMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTTYEYI-----------------LKD 510
QA RD+ G++ ++V+LT+Y I +K+
Sbjct: 434 LYYGQA-RDI------------SGEELSSYDVVLTSYNVIESVYRKERSGFRRKNGVVKE 480
Query: 511 RSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNF 570
+S L +++ + +DEAH +K+ + ++ + ++ ++GTPLQN I EL +L+ F
Sbjct: 481 KSLLHQMEFYRIILDEAHGIKSRTCNTARAVCGLRTTRKICLSGTPLQNRIGELFSLLRF 540
Query: 571 LMPGRF 576
L F
Sbjct: 541 LRADPF 546
Score = 82.8 bits (203), Expect = 4e-15
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 727 LIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAG 786
++FSQ +LD++ L G N +LDG + R +I+ F+ D N +FL+S +AG
Sbjct: 814 IVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFS-NDINITIFLVSLKAG 872
Query: 787 GLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERAR 846
G+ +NL A V + D WN QAM R HRIGQK + V ++++E +++E
Sbjct: 873 GVALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIENSIESKIIELQE 932
Query: 847 KKMILEYAIISLGVTDGNKIS 867
KK + +A I N++S
Sbjct: 933 KKAQMIHATIDQDEKALNQLS 953
>CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1359
Score = 85.9 bits (211), Expect = 5e-16
Identities = 157/751 (20%), Positives = 290/751 (37%), Gaps = 143/751 (19%)
Query: 19 RRSHRAAITHNTYAGLDSDSDEEVIRPRRGKQK-----------------RKAVKQEHNY 61
++ ++ T + D DSDEE + + K K RK K + N
Sbjct: 113 KKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNK 172
Query: 62 DXXXXXXXXIDDFSDTDDFGSKRKP--------TRAPSAKRGRKRVSAGNSKSKRQAKRV 113
+ + SD D+ SK+ + + S K V KSK+ K+
Sbjct: 173 EKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKE 232
Query: 114 EESDEENVVLPTRFSSRNNNKVINYTLNDDSNDEDLMESSEEQDEGHNLDSEDMDLQDGY 173
ES++E P + + + + T +++S++ + + EE+ E + L
Sbjct: 233 SESEDE---APEKKKTEKRKR--SKTSSEESSESEKSDEEEEEKESSPKPKKKKPLA--- 284
Query: 174 SASPSPQQETHSIDI-VVDHRLKEG----VDNSGSTKNRRWDVDSIRANFEFLIKWADQS 228
S +E+ D+ V+ + K G + +S K+++ + ++ + K A +
Sbjct: 285 VKKLSSDEESEESDVEVLPQKKKRGAVTLISDSEDEKDQKSESEASDVEEKVSKKKAKKQ 344
Query: 229 HLHNSWESYEDLKENGTKGLKRIENYYKQFIILDQEVRADPYTTREDIEVMDLEHERRID 288
S ES D E ++ + K P ++ I +MD
Sbjct: 345 E---SSESGSDSSEGSITVNRKSKKKEK------------PEKKKKGI-IMDSS------ 382
Query: 289 EFEEFKVPERIIDSERFENEDGSGSSQLKYLVKWRRLNYDECTWEVASEIVKMAPEQVKE 348
K+ + ID+ER E E + K L K ++ ++ E ++ +M
Sbjct: 383 -----KLQKETIDAERAEKE------RRKRLEK-KQKEFNGIVLEEGEDLTEMLTGTSS- 429
Query: 349 FQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQLTGINWM---AF---- 401
Q + S ++ +SS + + ++ S ++ L+ Q GI +M AF
Sbjct: 430 -QRKLKSVVLDPDSSTVDEESK---KPVEVHNSLVR--ILKPHQAHGIQFMYDCAFESLD 483
Query: 402 -LWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPH---LVVVPLSTMPAWQETFD 457
L ++ GILA MGLGKT+Q ++F+ ++ + LVVVP + + W + F
Sbjct: 484 RLDTEGSGGILAHCMGLGKTLQVITFLHTVLMHEKIGEKCKRVLVVVPKNVIINWFKEFQ 543
Query: 458 KWAPG----LNCV-------------------YYMGNQASRDLIQDYEFYT------NPQ 488
KW L+ + + ++ +I Y+ + +P+
Sbjct: 544 KWLVDNDEELDTIDVNELDSYKTIEDRRRALKAWHSSKTPSVMIIGYDLFRILTVEDDPK 603
Query: 489 AKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVAN 548
K K+ + ++ R L + + DEAH+LKN +S+L + +
Sbjct: 604 KKKPKNRNRRLEKAKEDF----RKYLQNPGPDMVVCDEAHKLKNDDSALSKCMVKILTKR 659
Query: 549 RLLITGTPLQNNIKELAALVNFLMPGRFTIDQE-----IDFENQDEQQEEYIRDLH--KR 601
R+ +TGTPLQNN+ E +VNF+ PG E ++ N+ ++ ++ KR
Sbjct: 660 RICLTGTPLQNNLMEYHCMVNFVKPGLLGTKTEFANRFVNIINRGRTKDASPLEVSFMKR 719
Query: 602 LQPFILRRLKKDVEK--------SLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGI 653
+ LKK V++ ++P K E ++ V ++ Q Y L G
Sbjct: 720 RCHVLYDHLKKCVDRKDYRVLTEAIPPKQEYVINVRQTERQCALYNAFLND-----IVGD 774
Query: 654 KGGHVSLLNVMNELKKASNHPYLFDNAEERV 684
G LL + + HPY E+R+
Sbjct: 775 SGLSKRLLPDYHMFSRIWTHPYQLVLHEQRM 805
Score = 80.9 bits (198), Expect = 1e-14
Identities = 40/101 (39%), Positives = 64/101 (62%), Gaps = 1/101 (0%)
Query: 745 IKGINFQRLDGTVPSAQRRISIDHFNAE-DSNDFVFLLSTRAGGLGINLMTADTVIIFDS 803
++G ++ +DG+V S +R FN + + L+STRAG LG N++ A+ VIIFD+
Sbjct: 1011 LEGEDYMTIDGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNMVAANRVIIFDA 1070
Query: 804 DWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLER 844
WNP D Q++ R +R GQ V +YRF+++ T+EE + +R
Sbjct: 1071 CWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKR 1111
>Hs19923174 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1162
Score = 85.5 bits (210), Expect = 6e-16
Identities = 45/131 (34%), Positives = 75/131 (56%), Gaps = 1/131 (0%)
Query: 727 LIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAG 786
+I SQ +L ++ +L G+ + +DG+V QR ++ FN V L+S AG
Sbjct: 1013 VIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVEAFN-HSRGPQVMLISLLAG 1071
Query: 787 GLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERAR 846
G+G+NL + + + D WNP + QA R +R+GQ+ V+++RFV + TVEE++L+
Sbjct: 1072 GVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQE 1131
Query: 847 KKMILEYAIIS 857
KK L ++S
Sbjct: 1132 KKKDLAKQVLS 1142
Score = 69.7 bits (169), Expect = 3e-11
Identities = 82/352 (23%), Positives = 146/352 (41%), Gaps = 83/352 (23%)
Query: 392 QLTGINWMAFLW---SKNDNGILADEMGLGKTVQTVSFI------------------SWL 430
Q + W+ LW K GILAD+MGLGKT+ ++ I +WL
Sbjct: 574 QKQALAWL--LWRESQKPQGGILADDMGLGKTLTMIALILTQKNQEKKEEKEKSTALTWL 631
Query: 431 IYARR---QNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNP 487
+ L++ P S + W+ +K Y+ + +RD
Sbjct: 632 SKDDSCDFTSHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRD----------- 680
Query: 488 QAKGKKHLKFNVLLTTYEYILKDRST--------------------LGSIKWQFLAVDEA 527
++ + +++++TTY + K+ T L I W + +DEA
Sbjct: 681 -SRARVLSTYDIVITTYSLVAKEIPTNKQEAEIPGANLNVEGTSTPLLRIAWARIILDEA 739
Query: 528 HRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQ----EID 583
H +KN ++ + R +TGTP+QNN+ ++ +L+ FL F D+
Sbjct: 740 HNVKNPRVQTSIAVCKLQACARWAVTGTPIQNNLLDMYSLLKFLRCSPF--DEFNLWRSQ 797
Query: 584 FENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKS------LPSKTERILRVELSDVQTEY 637
+N ++ E + L K L +LRR K ++ + LP + ++ ++LS+ +
Sbjct: 798 VDNGSKKGGERLSILTKSL---LLRRTKDQLDSTGRPLVILPQRKFQLHHLKLSEDEETV 854
Query: 638 YKNILTKNYSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEERVLSKFG 689
Y ++ SAL S +K H S N+ ++ N+P+ RV +FG
Sbjct: 855 YNVFFARSRSALQSYLK-RHESR---GNQSGRSPNNPF------SRVALEFG 896
>CE14110 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1026
Score = 85.1 bits (209), Expect = 8e-16
Identities = 45/140 (32%), Positives = 77/140 (54%), Gaps = 8/140 (5%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
+V+I SQ +L+++ ++ G N+ + G V R+ +D FN E V LLS
Sbjct: 858 KVVIVSQWTSVLNLVEKHIQAGGHNYTSITGQVLVKDRQERVDSFNQEKGGAQVMLLSLT 917
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVY--------RFVSKDT 836
AGG+G+NL+ + +I+ D WNP + QA R +R+GQK V ++ R + K T
Sbjct: 918 AGGVGLNLIGGNHLIMVDLHWNPALEQQACDRIYRMGQKKEVFIHRLNISKFCRLIVKGT 977
Query: 837 VEEEVLERARKKMILEYAII 856
+E+ V++ KK+ L +++
Sbjct: 978 IEQRVMDLQEKKLALAASVL 997
>At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 675
Score = 85.1 bits (209), Expect = 8e-16
Identities = 90/385 (23%), Positives = 162/385 (41%), Gaps = 52/385 (13%)
Query: 490 KGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSF--KVA 547
KG HL + +Y+ + K L ++ ++ + DE+H LKN ++ + K
Sbjct: 290 KGTIHLDGVFNIVSYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKKAQ 349
Query: 548 NRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIR----------- 596
+L++GTP + EL + L P + E +I
Sbjct: 350 YAILLSGTPALSRPIELFKQLEALYPDVYRNIHEYGGRYCKGVSPLHIEKLPRSSYKGFF 409
Query: 597 ----------DLHKRLQPFIL-RRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKN 645
+LH ++ ++ RRLKKDV LPSK + + ++L+ + N L
Sbjct: 410 GTYQGASNHDELHNLMKATVMIRRLKKDVLTELPSKRRQQVFLDLAAKDMKQI-NALFHE 468
Query: 646 YSALTSGIKGG-HVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIM 704
+ S IK + + ++K + D+A ++ + EN++
Sbjct: 469 LKVVKSKIKDCISEDDIKSLKFIEKNLINKIYTDSAVAKIPAVLD----YLENVIEA--- 521
Query: 705 SSGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRI 764
G + L+F+ +L+ L +L K + R+DG+ P++ R+
Sbjct: 522 ------------------GCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQA 563
Query: 765 SIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKN 824
+ F +D +LS RA G+GI L A TVI + W P +QA RAHRIGQ +
Sbjct: 564 LVSDFQDKDEIKAA-VLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVS 622
Query: 825 HVMVYRFVSKDTVEEEVLERARKKM 849
V ++ ++ DTV++ + + + K+
Sbjct: 623 SVNIHYLLANDTVDDIIWDVVQSKL 647
>At3g42670 [L] KOG0390 DNA repair protein SNF2 family
Length = 1256
Score = 82.8 bits (203), Expect = 4e-15
Identities = 122/549 (22%), Positives = 215/549 (38%), Gaps = 70/549 (12%)
Query: 410 ILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYM 469
+++ G GKT ++F++ + P LV+ P +T+ W + F KW +
Sbjct: 709 VVSHTPGAGKTFLIIAFLASYLKIFPGKRP-LVLAPKTTLYTWYKEFIKWEIPVPVHLLH 767
Query: 470 GNQA---SRDLIQDYEFYTNPQAK-----------GKKHLKFNVLL---TTYEYILKDRS 512
G + S++ +E P K H + +VL+ T++ ++++ S
Sbjct: 768 GRRTYCMSKEKTIQFEGIPKPSQDVMHVLDCLDKIQKWHAQPSVLVMGYTSFLTLMREDS 827
Query: 513 TLGSIKWQ---------FLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKE 563
K+ L +DE H ++ +S L ++L R+L++GT QNN E
Sbjct: 828 KFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNNFCE 887
Query: 564 LAALVNFLMPGRFTIDQEIDFE-----NQDEQQEEYIRDLHKRLQPFILRRLKKDVEKSL 618
+ P +F + ++ + NQ EQ+ ++ L R + F L + K ++ +
Sbjct: 888 YFNTLCLARP-KFVHEVLVELDKKFQTNQAEQKAPHL--LENRARKFFLDIIAKKIDTKV 944
Query: 619 PSKTERILRVELSDVQTEYYKNILTKN------------YSALTSGIKGGHVSLLNVMNE 666
+ + L + L ++ + + N Y+ L + H SL + N
Sbjct: 945 GDERLQGLNM-LRNMTSGFIDNYEGSGSGSGDVLPGLQIYTLLMNSTDVQHKSLTKLQNI 1003
Query: 667 LKK--------------ASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGXXXXX 712
+ A+ HP+L +KF + + E G
Sbjct: 1004 MSTYHGYPLELELLITLAAIHPWLVKTTT--CCAKFFNPQELLEIEKLKHDAKKGSKVMF 1061
Query: 713 XXXXXXXXXDGHRVLIFSQMVR----ILDILGDYLSIK-GINFQRLDGTVPSAQRRISID 767
++LIF + L++ + K G L G + +R ID
Sbjct: 1062 VLNLVFRVVKREKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDLELFERGRVID 1121
Query: 768 HFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVM 827
F V L S A GI+L A VI+ DS+WNP QA+ARA R GQ+ V
Sbjct: 1122 KFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVY 1181
Query: 828 VYRFVSKDTVEEEVLERARKKMILEYAIISLG-VTDGNKISSTKKNEPSAGELSEILKFG 886
VY+ +S+ T+EE+ R K + I S V D ++ + K + E+ E K
Sbjct: 1182 VYQLLSRGTLEEDKYRRTTWKEWVSSMIFSEEFVEDPSQWQAEKIEDDVLREIVEEDKVK 1241
Query: 887 AGNMFKPND 895
+ +M N+
Sbjct: 1242 SFHMIMKNE 1250
>YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1169
Score = 81.3 bits (199), Expect = 1e-14
Identities = 51/138 (36%), Positives = 74/138 (52%), Gaps = 5/138 (3%)
Query: 723 GHRVLIFSQMVRILDILGDYL----SIKGINFQRLDGTVPSAQRRISIDHFNAED-SNDF 777
G +V+IFSQ LDIL L S + DG + +R + F +D S
Sbjct: 1012 GEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQK 1071
Query: 778 VFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTV 837
+ LLS +AGG+G+NL A + D W+P + QA+ R HRIGQ N V V RF+ +D++
Sbjct: 1072 ILLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSI 1131
Query: 838 EEEVLERARKKMILEYAI 855
EE++L KK + A+
Sbjct: 1132 EEKMLRIQEKKRTIGEAM 1149
Score = 69.7 bits (169), Expect = 3e-11
Identities = 87/339 (25%), Positives = 144/339 (41%), Gaps = 78/339 (23%)
Query: 409 GILADEMGLGKTVQTVSFISWLIY---------------ARRQNGPH------------- 440
GIL+DEMGLGKTV S + + A N P
Sbjct: 528 GILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIENTAVSDNLPSTWQDNKKPYASKT 587
Query: 441 -LVVVPLSTMPAWQETFDKW--APGL-NCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLK 496
L+VVP+S + W F K +P + + VYY GN +S + K
Sbjct: 588 TLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKTLLT-----------KTKTP 636
Query: 497 FNVLLTTYEYILKD----------------RSTLGSIKWQFLAVDEAHRLKNAESSLYES 540
V+LTTY + + S L S+ + + +DE H ++N + ++
Sbjct: 637 PTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRNRTTVTSKA 696
Query: 541 LNSFKVANRLLITGTPLQNNIKELAALVNFLM--PGR----FTIDQEIDFENQDEQQEEY 594
+ + + + ++TGTP+ N + +L +LV FL P R + FE+++ +Q
Sbjct: 697 VMALQGKCKWVLTGTPIINRLDDLYSLVKFLELDPWRQINYWKTFVSTPFESKNYKQAFD 756
Query: 595 IRDLHKRLQPFILRRLKKDVEK------SLPSKTERILRVELSDVQTEYYKNILTKNYSA 648
+ ++ L+P +LRR K+ +K LP K I R+ S Q YK +L K +
Sbjct: 757 V--VNAILEPVLLRRTKQMKDKDGKPLVELPPKEVVIKRLPFSKSQDLLYKFLLDKAEVS 814
Query: 649 LTSGIKGG-----HVSLLNVMNELKKASNHPYLFDNAEE 682
+ SGI G + ++L + L++ HP L + +E
Sbjct: 815 VKSGIARGDLLKKYSTILVHILRLRQVCCHPGLIGSQDE 853
>CE11450 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 518
Score = 81.3 bits (199), Expect = 1e-14
Identities = 42/124 (33%), Positives = 70/124 (55%), Gaps = 1/124 (0%)
Query: 747 GINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWN 806
G + + G V R+ +D FN E LLS AGG+G+NL+ + +I+ D WN
Sbjct: 379 GHGYTSITGEVAIKDRQERVDSFNQEKGGAQDMLLSLTAGGVGLNLIGGNHLIMVDLHWN 438
Query: 807 PQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDG-NK 865
P + QA R +R+GQK V ++R + K+T+E+ V+ KK+ L +++ T G NK
Sbjct: 439 PALEQQACDRIYRMGQKKEVHIHRLIVKETIEQRVMSLQEKKLALAASVLEGSATRGMNK 498
Query: 866 ISST 869
++++
Sbjct: 499 LTNS 502
Score = 59.3 bits (142), Expect = 5e-08
Identities = 49/198 (24%), Positives = 86/198 (42%), Gaps = 38/198 (19%)
Query: 387 ELRDFQLTGINWMAFLWSK-NDNGILADEMGLGKTVQTVSFISWLIYAR--RQNGPHLVV 443
+L Q G+ W+ + S+ + GIL +MGLGKT+ +S I AR R++ +
Sbjct: 143 DLMPHQKAGLCWLLWRESQPHSGGILGGDMGLGKTLSMISLIVHQKAARKTRKDAGDDAI 202
Query: 444 VPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNPQAKGKKHLKFNVLLTT 503
P S + W+ + + +DL+ ++ N + K LK ++ L
Sbjct: 203 APESLVHHWEAE-------------IARRLKQDLLSVLVYHGNRRHINPKDLKKHIEL-- 247
Query: 504 YEYILKDR-------------------STLGSIKWQFLAVDEAHRLKNAESSLYESLNSF 544
+Y L+D S L I W ++ +DEAH +KN + E+
Sbjct: 248 -DYDLEDEHNPCSKLRPRVCPKADKNSSPLARIAWSYVILDEAHIIKNRNAQCSEAACKI 306
Query: 545 KVANRLLITGTPLQNNIK 562
+R ++GTP+ NN++
Sbjct: 307 SAFSRWCLSGTPIHNNMR 324
>Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 122
Score = 80.5 bits (197), Expect = 2e-14
Identities = 37/74 (50%), Positives = 52/74 (70%)
Query: 405 KNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLN 464
K ++ ILADEMGLGKT+Q +SF+S+L + GP L+VVPLSTM +WQ F+ W +N
Sbjct: 28 KRNSVILADEMGLGKTIQVISFLSYLFNVHQLYGPFLIVVPLSTMTSWQREFEAWDSKMN 87
Query: 465 CVYYMGNQASRDLI 478
V Y+G+ SR+ +
Sbjct: 88 VVVYIGDINSRNSV 101
>7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1534
Score = 76.6 bits (187), Expect = 3e-13
Identities = 78/289 (26%), Positives = 119/289 (40%), Gaps = 63/289 (21%)
Query: 410 ILADEMGLGKTVQTVSFISWLIYARRQNGPH-LVVVPLSTMPAWQETFDKWAPGLNCVYY 468
ILA MGLGKT+Q VSF I+ R + L V+P++T+ W F+ W P Y
Sbjct: 415 ILAHSMGLGKTLQVVSFCD--IFLRHTSAKTVLCVMPINTLQNWLSEFNMWIPR-----Y 467
Query: 469 MGNQASRDLIQDYEFYTNPQ-----AKGKKHLKF----NVLLTTYEY-------ILKDRS 512
+ R D F N Q A+ K L + VLL YE ++K R
Sbjct: 468 STDSNVRPRNFDI-FVLNDQQKTLTARAKVILNWVHDGGVLLIGYELFRLLALKLVKTRK 526
Query: 513 TLGSIKW-----------------------QFLAVDEAHRLKNAESSLYESLNSFKVANR 549
GS+ + DE HR+KN+ + + +L + R
Sbjct: 527 RKGSVIRPDGMDSSSDLMNLVYEALVKPGPDLVICDEGHRIKNSHAGISLALKEIRTRRR 586
Query: 550 LLITGTPLQNNIKELAALVNFLMPGRFTIDQE--------------IDFENQDEQQEEY- 594
+++TG PLQNN+ E +V+F+ P E +D D + Y
Sbjct: 587 IVLTGYPLQNNLLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDSTPDDIKLMRYR 646
Query: 595 IRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILT 643
LH L F+ RR ++ +LP K E ++ V+++ Q + Y +T
Sbjct: 647 AHVLHSLLLGFVQRRSHTVLQLTLPQKYEYVILVKMTAFQRKLYDTFMT 695
>At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 638
Score = 76.3 bits (186), Expect = 4e-13
Identities = 100/392 (25%), Positives = 171/392 (43%), Gaps = 58/392 (14%)
Query: 344 EQVKEFQNRTNSKIMPQNSSNYPANQRPKFEKLDAQPSFIKGGELRDFQLTGINWMAFLW 403
E+V+E + N +++ Q + ++PK EK D P + +R Q +NWM
Sbjct: 13 EEVQEEKTTVNERVIYQAALQ--DLKQPKTEK-DLPPGVLTVPLMRH-QKIALNWMRKKE 68
Query: 404 SKNDN---GILADEMGLGKTVQTVSFI--------SWLIYARRQN-GPHLVVVPLSTMPA 451
++ + GILAD+ GLGKT+ T+S I S + QN G L+V P S +
Sbjct: 69 KRSRHCLGGILADDQGLGKTISTISLILLQKLKSQSKQRKRKGQNSGGTLIVCPASVVKQ 128
Query: 452 W-QETFDKWAPG--LNCVYYMGNQASRDL--IQDYEFYTNPQAKGKKHLKFNVLLTTYEY 506
W +E +K + L+ + + G+ ++D I Y+ A + N +L Y+
Sbjct: 129 WAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAIYDVVMTTYAIVTNEVPQNPMLNRYDS 188
Query: 507 ILKDRS------------TLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITG 554
+ S LG ++W + +DEAH +KN + + ++ S + R +TG
Sbjct: 189 MRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFSLRAKRRWCLTG 248
Query: 555 TPLQNNIKELAALVNFLMPGRFTIDQEIDFENQ---DEQQEEYIRDLHKRLQPFILRRLK 611
TP++N + +L + FL + + + D++ + L L+ +LRR K
Sbjct: 249 TPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPIDKKPLHGYKKLQAILRGIMLRRTK 308
Query: 612 KDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVM-NELKKA 670
E S K E R + + Y+A G H++ L VM L++A
Sbjct: 309 ---EWSFYRKLELNSRWKFEE-------------YAA--DGTLHEHMAYLLVMLLRLRQA 350
Query: 671 SNHPYLFDN-AEERVLSKFGDGHK--SRENIL 699
NHP L + + K DG + REN++
Sbjct: 351 CNHPQLVNGYSHSDTTRKMSDGVRVAPRENLI 382
Score = 67.4 bits (163), Expect = 2e-10
Identities = 40/96 (41%), Positives = 55/96 (56%), Gaps = 1/96 (1%)
Query: 761 QRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRI 820
Q R S + N+ L+S +AG LG+N++ A VI+ D WNP + QA+ RAHRI
Sbjct: 492 QSRHSTNKDNSISGLVCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRI 551
Query: 821 GQKNHVMVYRFVSKDTVEEEVLE-RARKKMILEYAI 855
GQ V V R K+TVEE +L RK+ I+ A+
Sbjct: 552 GQTRAVTVTRIAIKNTVEERILTLHERKRNIVASAL 587
>7298962 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 965
Score = 75.9 bits (185), Expect = 5e-13
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLD--GTVPSAQRRISIDHFNAEDSNDFVFLLS 782
++++ SQ V L I+ L + ++++ LD G + + +R I + FNA + V LLS
Sbjct: 809 KIIVTSQWVSYLAIVRKRL--QDLSWETLDFNGQLTAKEREIVLRDFNANNEKR-VLLLS 865
Query: 783 TRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEV 841
AGG+G+NL A+ ++I D WNPQ + QA R +R GQ +YR++ +DTVE+ +
Sbjct: 866 LTAGGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRI 924
Score = 56.6 bits (135), Expect = 3e-07
Identities = 60/253 (23%), Positives = 119/253 (46%), Gaps = 35/253 (13%)
Query: 407 DNGILADEMG--LGKTVQTVSFISWLIYARRQNGPH-----LVVVPLSTMPAWQETFDKW 459
D ++ DE L KT + F S NG + LVV P+S M W
Sbjct: 352 DKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSNGRYPSANTLVVCPMSVMCQW------- 404
Query: 460 APGLNCVYYMGNQASRDLIQDYEFY-TNPQAKGKKHLK-FNVLLTTYEYILKD------R 511
+ + ++ +++ I+ F+ N G + + +++++T+Y ++ +
Sbjct: 405 ------AHEVASKVAQNAIRVLTFHGPNRHEIGIEAFRSYDLVITSYNLVVNELKRYGNT 458
Query: 512 STLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFL 571
S L ++ W + +DEAH ++N++++ S+ + +TGTP+QN ++ AL+ F+
Sbjct: 459 SPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTGTPVQNRGVDVFALLRFV 518
Query: 572 MPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDVEKS-----LPSKTERIL 626
F Q+ +N +E + R L+ ++P +LRR K+ ++ S LPS ++
Sbjct: 519 NVPNFQDLQQWK-KNLNESMLGH-RRLNFIIKPLMLRRTKQKLQASGDMPALPSLKIELI 576
Query: 627 RVELSDVQTEYYK 639
V+LS + Y+
Sbjct: 577 CVQLSKTEMAVYQ 589
>At5g20420 [L] KOG0390 DNA repair protein SNF2 family
Length = 1261
Score = 75.1 bits (183), Expect = 8e-13
Identities = 116/517 (22%), Positives = 197/517 (37%), Gaps = 82/517 (15%)
Query: 410 ILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYM 469
+++ G GKT ++F++ + P LV+ P +T+ W + F KW +
Sbjct: 714 VISHSPGAGKTFLIIAFLTSYLKLFPGKRP-LVLAPKTTLYTWYKEFIKWEIPVPVHLIH 772
Query: 470 GNQA------------------SRDLIQDYEFYTNPQAKGKKHLKFNVLL---TTYEYIL 508
G + SRD++ + Q K H +VL+ T++ ++
Sbjct: 773 GRRTYCTFKQNKTVQFNGVPKPSRDVMHVLDCLEKIQ---KWHAHPSVLVMGYTSFTTLM 829
Query: 509 KDRSTLGSIKWQ---------FLAVDEAHRLKNAESSLYESLNSFKVANRLLITGTPLQN 559
++ S K+ L +DE H ++ +S L ++L R+L++GT QN
Sbjct: 830 REDSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRILLSGTLFQN 889
Query: 560 NIKEL-----AALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDV 614
N E A F+ +DQ+ N + ++ L R + L + K +
Sbjct: 890 NFCEYFNTLCLARPKFIHEVLMELDQKFK-TNHGVNKAPHL--LENRARKLFLDIIAKKI 946
Query: 615 EKSLPSKTERILRV---------------------ELSDVQ--------TEYYKNILTKN 645
+ S+ + + L + L +Q T+ ILTK
Sbjct: 947 DASVGDERLQGLNMLKNMTNGFIDNYEGSGSGSGDALPGLQIYTLVMNSTDIQHKILTK- 1005
Query: 646 YSALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMS 705
L IK L V ++ A+ HP+L ++ +KF + + E
Sbjct: 1006 ---LQDVIKTYFGYPLEVELQITLAAIHPWLVTSSN--CCTKFFNPQELSEIGKLKHDAK 1060
Query: 706 SGXXXXXXXXXXXXXXDGHRVLIFSQMVRILDILGDYLSI-----KGINFQRLDGTVPSA 760
G ++LIF + + + + +G L G +
Sbjct: 1061 KGSKVMFVLNLIFRVVKREKILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDLELF 1120
Query: 761 QRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRI 820
+R ID F + V L S A GI+L A VI+ DS+WNP QA+ARA R
Sbjct: 1121 ERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRP 1180
Query: 821 GQKNHVMVYRFVSKDTVEEEVLERARKKMILEYAIIS 857
GQ+ V VY+ +S+ T+EE+ R K + I S
Sbjct: 1181 GQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSCMIFS 1217
>ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 556
Score = 74.3 bits (181), Expect = 1e-12
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 723 GHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLS 782
G + ++F +++ L + + + + R+DG+VPS R + + F E+ V LLS
Sbjct: 394 GMKFVVFCHHTEMMESLEGFFAERNVPMIRIDGSVPSTSRHLLVKKFQ-ENEEVMVALLS 452
Query: 783 TRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVL 842
A G+ L V+ + WNP LQA R HRIGQK+ V + V+K T++E V
Sbjct: 453 ITACSTGLTLTAGRAVVFAELYWNPGVLLQAEDRIHRIGQKSSVDIIYLVAKGTIDEYVW 512
Query: 843 ERARKKM-ILEYAIISLGVTDGNKISSTKKNEPSAGE 878
+ K+ +LE SLGV N++ + + +AG+
Sbjct: 513 PKLLSKLNVLE----SLGV-GSNQLKNVGVSSQAAGQ 544
>YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1619
Score = 73.6 bits (179), Expect = 2e-12
Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLD--GTVPSAQRRISIDHFNAEDSNDFVFLLS 782
+++IFSQ +IL +L K +NF L G++ +AQRR + + D + L+S
Sbjct: 1463 KIIIFSQFTTFFEILEHFLKNK-LNFPYLKYIGSM-NAQRRSDVINEFYRDPEKRILLIS 1520
Query: 783 TRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVL 842
+AG G+ L A+ V+I D WNP + QA R +RI Q V V++ KD+VE+ +
Sbjct: 1521 MKAGNSGLTLTCANHVVIVDPFWNPYVEEQAQDRCYRISQTKKVQVHKLFIKDSVEDRIS 1580
Query: 843 E-RARKKMILEYAI 855
E + RKK +++ A+
Sbjct: 1581 ELQKRKKEMVDSAM 1594
Score = 71.2 bits (173), Expect = 1e-11
Identities = 81/361 (22%), Positives = 152/361 (41%), Gaps = 54/361 (14%)
Query: 392 QLTGINWMAFLW-SKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMP 450
Q G++W+ + S G+LAD+MGLGKT+Q ++ + + +L+V P+S +
Sbjct: 947 QRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKTNLIVAPVSVLR 1006
Query: 451 AWQ-------------ETFDKWAPGLNCVYYMGNQASRD-LIQDYEFYTNP--------- 487
W+ TF G V + + A D ++ Y+ N
Sbjct: 1007 VWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANEFKKHWPKKL 1066
Query: 488 -----QAKGKKHLK-FNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESL 541
Q H++ N L T+ EY + + +DE +KN + ++
Sbjct: 1067 DGEQNQLPAVPHIQALNRLKTSNEYY--SPFFCNDSTFYRILLDEGQNIKNKNTRASKAC 1124
Query: 542 NSFKVANRLLITGTPLQNNIKELAALVNFL------MPGRFTID------QEIDFENQDE 589
+ R +++GTP+QN++ EL +L+ FL RF +D + ++ +E
Sbjct: 1125 CTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNE 1184
Query: 590 QQEEYIRDLHKRLQPFILRRLKKDVEK-----SLPSKTERILRVELSDVQTEYYKNILTK 644
++ +R + L +LRR K D LP K + L + ++Y + +K
Sbjct: 1185 DRKNALRKVRVLLNAIMLRRSKADKIDGKPLLELPPKIVEVDESRLKGEELKFYTALESK 1244
Query: 645 NYS----ALTSGIKGGHVSLLNVMNELKKASNHPYLFDNAEERVL-SKFGDGHKSRENIL 699
N + L + +G + S+L ++ L++A H L E++ +K +G ++ L
Sbjct: 1245 NQALAKKLLNNSTRGSYSSVLTLLLRLRQACCHSELVVMGEKKAEGTKVANGKSFEDDWL 1304
Query: 700 R 700
R
Sbjct: 1305 R 1305
>SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 104
Score = 66.2 bits (160), Expect = 4e-10
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 778 VFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTV 837
V ++S +AGG+G+NL A+ V I D W+ + QA+ R HR+GQ+ V V R++ +DTV
Sbjct: 6 VLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIVRDTV 65
Query: 838 EEEVLERARKKMILEYAIISLGVTDGNK 865
EE +L+ +K + +LG+++G +
Sbjct: 66 EERMLKIQERK---NFITGTLGMSEGKQ 90
>At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1648
Score = 65.5 bits (158), Expect = 6e-10
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRIS-----------IDHFNAED 773
+VL+FS +LD+L + I R+ G S Q IS + E+
Sbjct: 1435 KVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKS-QTAISKFKGSEKETQKTNSHQKEE 1493
Query: 774 SNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVS 833
+ V LL + G G+NL+ A VI+ + NP A+ QA+ R HRIGQ+ +V+RF+
Sbjct: 1494 KSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRFLV 1553
Query: 834 KDTVEEEVLERARKK 848
TVEE + + R K
Sbjct: 1554 SGTVEESIYKLNRNK 1568
>SPAC144.05 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1375
Score = 62.8 bits (151), Expect = 4e-09
Identities = 40/124 (32%), Positives = 61/124 (48%), Gaps = 5/124 (4%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
+V++FSQ + +LD+L GI F R DG + + F E S V L R
Sbjct: 1206 KVVVFSQWLDVLDVLHKSFEANGIVFIRFDGK----SKNTCLKRFKEERSLQ-VLTLHAR 1260
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVLER 844
+ G+ L A V + + N ++QA++R HRIGQ VY ++ +DTVE +L
Sbjct: 1261 SQSSGLTLTNATHVFMCEPLLNSGIEMQAISRVHRIGQTRPTFVYYYIVEDTVEGHILNL 1320
Query: 845 ARKK 848
+ K
Sbjct: 1321 SLTK 1324
Score = 60.8 bits (146), Expect = 2e-08
Identities = 60/277 (21%), Positives = 116/277 (41%), Gaps = 47/277 (16%)
Query: 409 GILADEMGLGKTVQ----------------TVSFISWLIYARRQNGPHLVVVPLSTMPAW 452
GILADEMG+GKT++ T +F + + + L++ P + + W
Sbjct: 286 GILADEMGMGKTLEVLGLVLHHQLPISLTDTCTFDQVVGKNVKYSKATLIITPSTILDQW 345
Query: 453 QETFDKWAPGLNCVYYMGNQASRDL---------------IQDYEF---YTNPQAKGKKH 494
D P L +Y G + S L D F YT ++ +H
Sbjct: 346 LSEIDLHVPSLKVFHYQGIRKSNGLKSAKIFLDCDIVVTSYSDLRFELLYTESHSRTLRH 405
Query: 495 LKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNSFKVANRLLITG 554
K +V +S L + W + VDEA ++ ++S++ + + N ++G
Sbjct: 406 EKRHV---------SPKSPLIDVCWWRICVDEAQMVETSQSNVAQMIYRIPRVNCWTVSG 456
Query: 555 TPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEQQEEYIRDLHKRLQPFILRRLKKDV 614
TP+++ + +L L+ L + ++ + E++ +R+ + R K+DV
Sbjct: 457 TPVRSEVDDLFGLLFLLRYSPMYLYKKQAWMQIIEKKR--VREFCDLFGSLVCRHSKQDV 514
Query: 615 EK--SLPSKTERILRVELSDVQTEYYKNILTKNYSAL 649
E+ LP + + LS V+ Y+++L++ +L
Sbjct: 515 EEELKLPPQHRICMTTRLSVVEETNYQDLLSEAAKSL 551
>7295362 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1270
Score = 62.8 bits (151), Expect = 4e-09
Identities = 38/118 (32%), Positives = 58/118 (48%), Gaps = 7/118 (5%)
Query: 725 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTR 784
++++FSQ IL + LS+ GI F+ + D F SN L+
Sbjct: 1125 KIIVFSQWQAILIEIARALSLNGIQFR-------NKCTNKDFDDFKNPLSNVTCLLMPLS 1177
Query: 785 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEVL 842
G G+NL+ A V + + NP + QA+ R HR GQK V+RF+ +T+EE +L
Sbjct: 1178 KGSKGLNLIEATHVFLVEPILNPGDERQAIGRIHRFGQKRPTKVHRFIVNETIEENIL 1235
>YLR247c [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1556
Score = 61.2 bits (147), Expect = 1e-08
Identities = 43/131 (32%), Positives = 70/131 (52%), Gaps = 6/131 (4%)
Query: 722 DGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLL 781
D +V+++SQ L ++G L + I + L +A +I++F + S + LL
Sbjct: 1378 DPPQVILYSQKTEYLKVIGKVLKLYHI--EHLACLSNTANVGETINNFKRQPSVTCL-LL 1434
Query: 782 STRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEV 841
+ + G G+NL+ A + + D N +LQAM R +RIGQ V+ F+ ++TVEE +
Sbjct: 1435 NVKTLGAGLNLINAKHIFLLDPILNNSDELQAMGRNNRIGQDEETFVWNFMIRNTVEENI 1494
Query: 842 LERARKKMILE 852
L R K ILE
Sbjct: 1495 L---RYKCILE 1502
>Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 293
Score = 57.0 bits (136), Expect = 2e-07
Identities = 45/179 (25%), Positives = 86/179 (47%), Gaps = 10/179 (5%)
Query: 722 DGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLL 781
D + L+F+ + +L + + + R+DG+V S++R ++ F +D + V +L
Sbjct: 85 DSLKFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQ-KDPDTRVAIL 143
Query: 782 STRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEV 841
S +A G G+ A V+ + W+P QA RAHRIGQ + V ++ ++ T++ +
Sbjct: 144 SIQAAGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLM 203
Query: 842 LERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEILKFGAGNMFKPNDNQQKL 900
+K A ++ +G K + E E + L+F + PND+ ++L
Sbjct: 204 WGMLNRK-----AQVTGSTLNGRK--EKIQAEEGDKEKWDFLQF--AEAWTPNDSSEEL 253
>CE23294 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 540
Score = 56.2 bits (134), Expect = 4e-07
Identities = 50/220 (22%), Positives = 97/220 (43%), Gaps = 38/220 (17%)
Query: 377 DAQPS-FIKGGELRDFQLTGINWMAFLWSKNDNG-ILADEMGLGKTVQTVSFI------- 427
DA P+ F+ L Q +WM ++ +G IL G GKT ++ I
Sbjct: 32 DATPNGFVADFRLMPHQEAARDWMIDREAQEPSGGILGLAHGQGKTAIVIALILDQKIKC 91
Query: 428 SWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQDYEFYTNP 487
+ Q P L++VP + W + F ++ + + Y +Y +
Sbjct: 92 ASNDKKFEQKSPTLIIVPKRIIYQWYDEFK-------------DRLEENALSVYLYYDDE 138
Query: 488 QAKGKKHL------KFNVLLTTYEYI-LKDRSTLG---------SIKWQFLAVDEAHRLK 531
++ +K++ K++V+LTTY + +K++ G +IKW + +DEAH ++
Sbjct: 139 FSEARKNISASELQKYDVVLTTYRNVPVKEKDETGEKVSKQVLQNIKWTRIVLDEAHNIR 198
Query: 532 NAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFL 571
++ + ++ + NR +T P QN+ ++ L+ FL
Sbjct: 199 DSNTKKSTAIATLASKNRWCVTAAPFQNSEWDICNLILFL 238
>Hs22054523 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1669
Score = 53.9 bits (128), Expect = 2e-06
Identities = 33/107 (30%), Positives = 55/107 (50%), Gaps = 4/107 (3%)
Query: 735 ILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDSNDFVFLLSTRAGGLGINLMT 794
+LDI+ L+ + F ++ V + Q +S D + LL G G+ ++
Sbjct: 1550 VLDIISKALTDNNMEFAQIS-RVKTFQENLSAFK---RDPQINILLLPLHTGSNGLTIIE 1605
Query: 795 ADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEEV 841
A V++ + NP +LQA+ R HRIGQ +V+RF+ K T+EE +
Sbjct: 1606 ATHVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERM 1652
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.313 0.132 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,129,661
Number of Sequences: 60738
Number of extensions: 4302013
Number of successful extensions: 16193
Number of sequences better than 1.0e-05: 158
Number of HSP's better than 0.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 15045
Number of HSP's gapped (non-prelim): 489
length of query: 1525
length of database: 30,389,216
effective HSP length: 120
effective length of query: 1405
effective length of database: 23,100,656
effective search space: 32456421680
effective search space used: 32456421680
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)