ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII4434 good J KOG2159 Translation, ribosomal structure and biogenesis tRNA nucleotidyltransferase/poly(A) polymerase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII4434 1567375 1565909 -489
(489 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YER168c [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polymerase 422 e-118
SPCC645.10 [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polym... 290 3e-78
SPAC1093.04c [J] KOG2159 tRNA nucleotidyltransferase/poly(A) pol... 243 6e-64
At1g22660 [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polyme... 241 1e-63
ECU03g1440 [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polym... 200 5e-51
Hs7705763 [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polyme... 69 1e-11
At5g23690 [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polyme... 53 1e-06
CE26815 [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polymerase 52 2e-06
>YER168c [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polymerase
Length = 546
Score = 422 bits (1084), Expect = e-118
Identities = 242/520 (46%), Positives = 312/520 (59%), Gaps = 35/520 (6%)
Query: 2 FKMVASKIQLNKVESEICTLVKEFCSHYN-KANAETEPLVARITGGWVRDKLLGNDSNDL 60
F + A KI L KVE IC L+ ++ YN K + + EPL RITGGWVRDKLLG S+DL
Sbjct: 23 FVLNAPKITLTKVEQNICNLLNDYTDLYNQKYHNKPEPLTLRITGGWVRDKLLGQGSHDL 82
Query: 61 DIAINNMTGEQFAEKLCAFLQDR----GLETHSLHTIDKNPSKSKHLETCTTKLFDVPVD 116
DIAIN M+GEQFA L +LQ G + H++H IDKNP KSKHLET TTKLF V VD
Sbjct: 83 DIAINVMSGEQFATGLNEYLQQHYAKYGAKPHNIHKIDKNPEKSKHLETATTKLFGVEVD 142
Query: 117 FVNLRSEEYTMESRIPKVEFGTPYDDAMRRDATLNAMFYNITEDKIEDFTKKGFQDLNDG 176
FVNLRSE+YT SRIPKV FGTP +DA+RRDATLNA+FYNI + ++EDFTK+G QDL DG
Sbjct: 143 FVNLRSEKYTELSRIPKVCFGTPEEDALRRDATLNALFYNIHKGEVEDFTKRGLQDLKDG 202
Query: 177 ILRTPLPPRQTFIDDPLRVLRLIRFASRFNFQIDPQTYQAMRDPGIHQSFNHKISKGRVY 236
+LRTPLP +QTF+DDPLRVLRLIRFASRFNF IDP+ M DP I+ +FN KIS+ RV
Sbjct: 203 VLRTPLPAKQTFLDDPLRVLRLIRFASRFNFTIDPEVMAEMGDPQINVAFNSKISRERVG 262
Query: 237 TEMHKTLTSANPFYALDLIQGAHLSRVIFTTNESSPEIESIYEN---------------L 281
EM K L P AL LIQ AHL VIF + S ++ EN L
Sbjct: 263 VEMEKILVGPTPLLALQLIQRAHLENVIFFWHNDSSVVKFNEENCQDMDKINHVYNDNIL 322
Query: 282 DQHLKSLVETIPKLLKSHTTFASVF---PGMQEPLILSLVLSGFKGLK--GPDPAKPKNS 336
+ HLKS +E P L+ PG Q+ ILS +LS L+ G K N
Sbjct: 323 NSHLKSFIELYPMFLEKLPILREKIGRSPGFQQNFILSAILSPMANLQIIGNPKKKINNL 382
Query: 337 IPLAGVITKEGLNFPNTQVDNVIACVESEDSYHNLV---KNGKSMKRSELGFALRKLGKN 393
+ + I KEGL + V+S SY ++ + +K+SE+G LR
Sbjct: 383 VSVTESIVKEGLKLSKNDAAVIAKTVDSICSYEEILAKFADRSQLKKSEIGIFLRNFNGE 442
Query: 394 WQMVHFYNLCLDYL-------RHGDEPIPHYDEFYKHVHDCKLDDVYTLKHIINGKELAK 446
W+ HF +L +L + + +Y+EFY ++ D L++ + LK I++GK++AK
Sbjct: 443 WETAHFASLSDAFLKIPKLETKKIELLFQNYNEFYSYIFDNNLNNCHELKPIVDGKQMAK 502
Query: 447 LLDRKPGIWMGETLDRILIWQLDNPDISKETFIENLNDIV 486
LL KPG W+G+ + + WQ DNP + + I +L I+
Sbjct: 503 LLQMKPGPWLGKINNEAIRWQFDNPTGTDQELITHLKAIL 542
>SPCC645.10 [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polymerase
Length = 484
Score = 290 bits (743), Expect = 3e-78
Identities = 167/497 (33%), Positives = 261/497 (51%), Gaps = 35/497 (7%)
Query: 7 SKIQLNKVESEICTLVKEFCSHYNKANAETEPLVARITGGWVRDKLLGNDSNDLDIAINN 66
S+I LN VE ++ L+K+ ++ + L R+ GGWVRDKLLG S+DLD+ +N
Sbjct: 3 SRIVLNDVEKKVVNLLKKTADFIESKSSSSSSLEVRLAGGWVRDKLLGLSSDDLDVTLNK 62
Query: 67 MTGEQFAEKLCAFLQDRGLET-----HSLHTIDKNPSKSKHLETCTTKLFDVPVDFVNLR 121
+TG FA + ++ ++ +L + NP +SKHLET T LFD+ +DFV LR
Sbjct: 63 VTGVDFANSIFEYVHSLDSDSVIPYKDALGKLTVNPDQSKHLETATLSLFDLDIDFVGLR 122
Query: 122 SEEYTMESRIPKVEFGTPYDDAMRRDATLNAMFYNITEDKIEDFTKKGFQDLNDGILRTP 181
+E Y +SRIP V GT DA+RRD T+N +F+NI +KIED TK+G++DL +L TP
Sbjct: 123 AESYDDKSRIPSVTPGTVETDALRRDFTVNTLFFNIRTEKIEDITKRGYKDLQTKVLVTP 182
Query: 182 LPPRQTFIDDPLRVLRLIRFASRFNFQIDPQTYQAMRDPGIHQSFNHKISKGRVYTEMHK 241
+ P Q+F++DPLR+LR IRFASRF F IDP A++DP + ++F K+SK RV E+ K
Sbjct: 183 ISPLQSFLEDPLRILRGIRFASRFEFTIDPSVVSAIQDPKVCKAFEKKVSKERVGEEIEK 242
Query: 242 TLTSANPFYALDLIQGAHLSRVIFTT--NESSPEIESIYENLDQHLKSLVETIPKLLKSH 299
L AN AL L+ + + F T E +I E + +SL T PKL+K
Sbjct: 243 MLKGANAKLALQLLYSTNTYQFTFDTLPAEKEFQIPKALEATESLFQSLALTFPKLMKLS 302
Query: 300 T-------TFASVFPGMQEPLILSLVLSGFKGLKGPDPAKPKNSIPLAGVITKEGLNFPN 352
+ ++ P + +++ K + +I K+ L +
Sbjct: 303 EDEKIGLWLYVALIPWSSQTVMVK-----------------KKQFYIPAIIAKDKLKLRS 345
Query: 353 TQVDNVIACVESEDSYHNLVKNGKSMKRSELGFALRKLGKNWQMVH----FYNLCLDYLR 408
T V+ + C + LV + + S +G +R+L K+W++V Y+ C
Sbjct: 346 TYVNQLNQCCTFNPIFDELVNDTSTKNCSSIGSLIRQLNKSWEVVFLTSVIYSCCKTPAA 405
Query: 409 HGDEPIPHYDEFYKHVHDCKLDDVYTLKHIINGKELAKLLDRKPGIWMGETLDRILIWQL 468
Y Y ++D L + Y +K +++GK++ K + KPG + ET+D ++ WQ
Sbjct: 406 SVSNTFSSYKSLYDFIYDKNLQNAYNMKPLLDGKQIMKNVGVKPGPQLKETMDNMISWQF 465
Query: 469 DNPDISKETFIENLNDI 485
+P+ S E + L +
Sbjct: 466 KHPEGSVEDCVAYLQSL 482
>SPAC1093.04c [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polymerase
Length = 534
Score = 243 bits (619), Expect = 6e-64
Identities = 160/493 (32%), Positives = 262/493 (52%), Gaps = 30/493 (6%)
Query: 6 ASKIQLNKVESEICTLVKEFCSHYNKANAETEPLVARITGGWVRDKLLGNDSNDLDIAIN 65
+S ++LN+ E E+ + + + + EP V R GGWVRDKLL +S+D+D+AI+
Sbjct: 39 SSILELNETEKELSDIFLNVSKKIGQMDRK-EPEV-RFAGGWVRDKLLRIESHDIDVAID 96
Query: 66 NMTGEQFAEKLCAFL--QDRGLETHSLHTIDKNPSKSKHLETCTTKLFDVPVDFVNLRSE 123
M+G +FA+ L ++L Q ET + ID NP KSKHLET T ++ + +D VNLR
Sbjct: 97 CMSGFEFAQHLQSYLAQQHPDWETKVIK-IDANPLKSKHLETATARIMGMDIDIVNLRHH 155
Query: 124 EYTMESRIPKVEFGTPYDDAMRRDATLNAMFYNITEDKIEDFTKKGFQDLNDGILRTPLP 183
+YT + K+ FGTP +DA+RRDAT+NA+FYN+ +EDFT KG DL++ I+RTPL
Sbjct: 156 DYTNSNSSNKLVFGTPLEDALRRDATINALFYNLKSKTVEDFTGKGLVDLSNKIIRTPLV 215
Query: 184 PRQTFIDDPLRVLRLIRFASRFNFQIDPQTYQAMRDPGIHQSFNHKISKGRVYTEMHKTL 243
+TF DDPLR +R IRFA++++F I +T + +++P +H+ IS+ R+ E+ K L
Sbjct: 216 ADETFGDDPLRAVRCIRFATKYDFNIHEETIKGLKNPELHERLRSSISRERIGVEVDKML 275
Query: 244 TSANPFYALDLIQGAHLSRVIF------TTNESSPEIESIYENLDQHLKSLVETIPKLLK 297
N AL +I + IF T S IES+ + ++ L K
Sbjct: 276 KHCNTNRALKIIHSLGMFACIFGPLEIHTKKLQSKNIESL-----SLIPYAIDLFGYLQK 330
Query: 298 SHTTFASVFPGMQEPLILSLVLSGFKGLKGPDPAKPKNSIPLAGVITKEGLNFPN---TQ 354
+ ++ I L ++ K K I L ++ ++ L + +Q
Sbjct: 331 KDVSIKNL--SSSSKYIFWLAIATLPWYNWSILEKSKIKI-LPPILIRDSLKYSKPIMSQ 387
Query: 355 VDNVIACVESEDSYHNLVKNGKSMKRSELGFALRKLGKNWQMV----HFYNLCL---DYL 407
V+N S N+++ + R G +R+LG +W+ + F N + D
Sbjct: 388 VENFFVHYPLIMSKINVLEKEGKLTRLGCGRLVRELGPHWRDIIDWAFFMNTLISNSDIQ 447
Query: 408 R-HGDEPIPHYDEFYKHVHDCKLDDVYTLKHIINGKELAKLLDRKPGIWMGETLDRILIW 466
R + DE + + KH+ + +++ Y ++ IING E+ ++L +PG + + LD + W
Sbjct: 448 RLNKDEEVTWFHVLVKHIEEYGMEEAYNIQPIINGNEITRILGIRPGPHLRKMLDDSIEW 507
Query: 467 QLDNPDISKETFI 479
++ NP+ +KE +I
Sbjct: 508 RIQNPESTKEDYI 520
>At1g22660 [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polymerase
Length = 605
Score = 241 bits (616), Expect = 1e-63
Identities = 161/498 (32%), Positives = 245/498 (48%), Gaps = 65/498 (13%)
Query: 42 RITGGWVRDKLLGNDSNDLDIAINNMTGEQFAEKLCAFLQDRGLETHSLHTIDKNPSKSK 101
R+ GGWVRDKLLG +S+D+DIAI+NM+G +F +K +L R E I++NP +SK
Sbjct: 111 RVAGGWVRDKLLGKESDDIDIAIDNMSGSEFLDKFKEYLSSRDEEVQGDTVIERNPDQSK 170
Query: 102 HLETCTTKLFDVPVDFVNLRSEEYTMESRIPKVEFGTPYDDAMRRDATLNAMFYNITEDK 161
HLET +++D +DFVNLRSEEYT SRIP ++FGT DDA RRD T+N++FYNI
Sbjct: 171 HLETAKLRIYDQWIDFVNLRSEEYTENSRIPTMKFGTAKDDAFRRDLTINSLFYNINSGA 230
Query: 162 IEDFTKKGFQDLNDGILRTPLPPRQTFIDDPLRVLRLIRFASRFNFQIDPQTYQAMRDPG 221
+ED T++G DL G + TPLP + TF+DDPLRVLR +RF +RF F +D + +A
Sbjct: 231 VEDLTERGIDDLKSGKIVTPLPAKATFLDDPLRVLRAVRFGARFGFTLDEELKEAASSEE 290
Query: 222 IHQSFNHKISKGRVYTEMHKTLTSANPFYALDLIQGAHLSRVIFTTNESSPEIESIYENL 281
+ + KIS+ R+ E+ ++ P A+ + L V+F S+ S EN
Sbjct: 291 VRVALGEKISRERIGNEIDLMISGNGPVSAVTYLSDLKLFSVVFALPSSAE--PSPPENC 348
Query: 282 DQHLKSLVETIPKLLKSHTTFASVFPGMQEPLILSLVL------SGFKGLKGPDPAKPKN 335
+S +E + LLK T F G Q L L + + +K KG
Sbjct: 349 GSLSQSYLEAMWSLLK--TPRPGKFSGEQRRLALYAAMFLPFRKTVYKDTKG-------K 399
Query: 336 SIPLAGVITKEGLNFPNTQVDNVIACVESEDSYHNLVKNGKSMKRSEL------------ 383
SIP+ I K + + + V+ ++ + + +L+ + + K EL
Sbjct: 400 SIPVVNHIFKFSMKRKTSDAETVMNIHQTTERFRSLIPSLEVKKDVELDELTWAADILEH 459
Query: 384 ---------------------GFALRKLGKNWQMVHFYNLCLDYLRHG----------DE 412
GF LR + W++ +L L G D
Sbjct: 460 WKSITLNDPVIPATSKIRVLTGFLLRDIKDFWRVSLLTSLLLSATVDGSNDHQDIGQLDF 519
Query: 413 PIPHYDEFY----KHVHDCKLDDVYTLKHIINGKELAKLLDRKPGI-WMGETLDRILIWQ 467
+ E Y +H+ LD ++ K ++NG+E+ ++ + K G + E ++L WQ
Sbjct: 520 QLERMRETYLTVEATIHELGLDKIWDAKPLVNGREIMQIAELKGGSRLIREWQQKLLTWQ 579
Query: 468 LDNPDISKETFIENLNDI 485
L P+ + E E + DI
Sbjct: 580 LAYPNGTAEECKEWMRDI 597
>ECU03g1440 [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polymerase
Length = 464
Score = 200 bits (508), Expect = 5e-51
Identities = 152/481 (31%), Positives = 238/481 (48%), Gaps = 34/481 (7%)
Query: 8 KIQLNKVESEICTLVKEFCSHYNKANAETEPLVARITGGWVRDKLLGNDSNDLDIAINNM 67
+I + E +I +L++ + +V R+ GGWVRDK++GN S D+DIA+ N+
Sbjct: 4 RINCTEAEKDIFSLIRSHAKGFGN-------VVPRVAGGWVRDKIMGNPSFDMDIALENI 56
Query: 68 TGEQFAEKLCAFLQDRGLETHSLHTIDKNPSKSKHLETCTTKLFDVPVDFVNLRSEEYTM 127
+G +FA L G + +H I NP KSKHLET ++ VDFVNLR+E Y+
Sbjct: 57 SGYKFAVGLVQ--SATGQKLTDVHVIKDNPEKSKHLETAVVRINGFCVDFVNLRNETYS- 113
Query: 128 ESRIPKVEFGTPYDDAMRRDATLNAMFYNITEDKIEDFTKKGFQDLNDGILRTPLPPRQT 187
E+RIP V+ GTP +DA RRD T+N++FYN+ ++IED+T +G +D+ +L TPL PR T
Sbjct: 114 ETRIPNVKPGTPQEDAFRRDLTINSLFYNLFTEEIEDYTGRGLEDIGRKVLATPLDPRTT 173
Query: 188 FIDDPLRVLRLIRFASRFNFQIDPQTYQAMRDPGIHQSFNHKISKGRVYTEMHKTLTSAN 247
+DDPLR++R+ RF S+ F ID + +A+ D + + K+S R++ E+ K L
Sbjct: 174 LLDDPLRLVRIFRFHSKLGFTIDKKIDEALEDKRVKVALAKKVSNERIHIEIFKILRYPR 233
Query: 248 PFYALDLIQGAHLSRVIFTTNESSPEIESIYENLDQHLKSLV--ETIPKLLKSHTTFASV 305
Y L I IF P +ES + K LV E + K+ T
Sbjct: 234 GQYGLLEIVRRDYVEPIF-----KPPVES----RTSYEKGLVFCEVVEKI-----TNLWG 279
Query: 306 FPGMQEPLILSLVLSGFKGLKGPDPAKPKNSIPLAGVITKEGLNFPNTQVDNVIACVESE 365
P +E L L VL F L P ++S+ I K L + V + ES
Sbjct: 280 RPYRREVLNLYTVLCFFSRLTVPG---GRDSVFSNTYIVKTSLPSSKSFVKMINKIEESL 336
Query: 366 DSYHNLVKNGKSMKRSELGFALRKLGKNWQMVHFYNLCLDYLRHGDEPIPHYDEFYKHVH 425
+ K K +L +R +G+ W ++++R G E + +
Sbjct: 337 VFLDGC--DMKKPKNEDLIRMVRFMGETWYESLVIYSAIEHMRGGHEKYENGLRVIYSII 394
Query: 426 DCKLDDVYTLKHIINGKELAKLLD-RKPGIWMGETLDRILIWQLDNPDISKETFIENLND 484
++ + Y + II+ LAK L+ KP I ++ +++QL + S E +++L
Sbjct: 395 QQEIGECYLSRPIIDTSRLAKTLEIPKPDIRF--YIEESIVYQLLSGTESPEEIVDHLRG 452
Query: 485 I 485
I
Sbjct: 453 I 453
>Hs7705763 [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polymerase
Length = 405
Score = 69.3 bits (168), Expect = 1e-11
Identities = 80/298 (26%), Positives = 123/298 (40%), Gaps = 35/298 (11%)
Query: 8 KIQLNKVESEICTLVKEFCSHYNKANAETEPLVARITGGWVRDKLLGNDSNDLDIAIN-- 65
K+Q + +S +K + K N E RI GG VRD L G D+D A
Sbjct: 2 KLQSPEFQSLFTEGLKSLTELFVKENHEL-----RIAGGAVRDLLNGVKPQDIDFATTAT 56
Query: 66 -NMTGEQFAEKLCAFLQDRGLETHSLHTIDKNPSKSKHLETCTTKLFDVPVDFVNLRSEE 124
E F + +RG E H T T +L + + LR +
Sbjct: 57 PTQMKEMFQSAGIRMINNRG-EKHG---------------TITARLHEENFEITTLRID- 99
Query: 125 YTMESRIPKVEFGTPYD-DAMRRDATLNAMFYNITEDKIEDFTKKGFQDLNDGILRTPLP 183
T + R +VEF T + DA RRD T+N+MF + F G++DL + +R
Sbjct: 100 VTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFDGTLFDYFN--GYEDLKNKKVRFVGH 157
Query: 184 PRQTFIDDPLRVLRLIRFASRF---NFQIDPQTYQAMRDPGIHQSFNHKISKGRVYTEMH 240
+Q +D LR+LR RF R DP+T +A+ + + IS R++ E+
Sbjct: 158 AKQRIQEDYLRILRYFRFYGRIVDKPGDHDPETLEAIAE---NAKGLAGISGERIWVELK 214
Query: 241 KTLTSANPFYALDLIQGAHLSRVI-FTTNESSPEIESIYENLDQHLKSLVETIPKLLK 297
K L + + + LI ++ I N S E + + +N+D V + L K
Sbjct: 215 KILVGNHVNHLIHLIYDLDVAPYIGLPANASLEEFDKVSKNVDGFSPKPVTLLASLFK 272
>At5g23690 [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polymerase
Length = 499
Score = 52.8 bits (125), Expect = 1e-06
Identities = 58/256 (22%), Positives = 104/256 (39%), Gaps = 53/256 (20%)
Query: 43 ITGGWVRDKLLGNDSNDLDIAINNMTGEQFAEKLCAFLQDRGLETHSLHTIDKNPSKSKH 102
+ GG VRD +L D DI +T + E S T +N S++
Sbjct: 99 LVGGCVRDLILKRTPKDFDI----LTSAELRE------------VSSFSTSAQNSSRNTR 142
Query: 103 LETCTTKLFDVPVDFVNLRSEEYTMESRIPKVEFGTPYDDAMRRDATLNAMFYNITEDKI 162
E + D D + L ++ ++RD T+N + ++ +
Sbjct: 143 TECKESSGSDGDEDCIRL--------------------NNCLQRDFTINGLMFDPYAKVV 182
Query: 163 EDFTKKGFQDLNDGILRTPLPPRQTFIDDPLRVLRLIRFASRFNFQIDPQTYQAMRDPGI 222
D+ G +D+ +RT + +F D R+LR IR A+R F++ +T +++ +
Sbjct: 183 YDYLG-GMEDIRKAKVRTVIHAGTSFHQDCARILRAIRIAARLGFRMSKETAHFIKNLSL 241
Query: 223 HQSFNHKISKGRVYTEMHKTLTSANPFYALDL------------IQGAHLSRVIFTTNES 270
++ KGR+ EM+ L + +L L IQ A+L+R F +
Sbjct: 242 ---LVQRLDKGRILMEMNYMLAYGSAEASLRLLWKFGILEILLPIQAAYLARSGFRRRDK 298
Query: 271 SPE-IESIYENLDQHL 285
+ S++ NLD+ L
Sbjct: 299 RTNMLLSLFANLDKLL 314
>CE26815 [J] KOG2159 tRNA nucleotidyltransferase/poly(A) polymerase
Length = 436
Score = 52.0 bits (123), Expect = 2e-06
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 42 RITGGWVRDKLLGNDSNDLDIAIN---NMTGEQFAEKLCAFLQDRGLETHSLHTIDKNPS 98
RI GG VRD L+ D+D A E F E L RG E H TI
Sbjct: 39 RIAGGAVRDLLMNIRPADVDFASTATPTQMKEMFEEDKIRMLHKRG-EEHG--TITCRID 95
Query: 99 KSKHLETCTTKLFDVPVDFVNLRSEEYTMESRIPKVEFGTPYD-DAMRRDATLNAMFYNI 157
++ E T + VD V + R +VE+ T + DA RRD T+N++F ++
Sbjct: 96 DCENFEITTLR-----VDIV--------CDGRRAQVEYTTDWQLDANRRDLTINSLFLDL 142
Query: 158 TEDKIEDFTKKGFQDLNDGILRTPLPPRQTFIDDPLRVLRLIRFASRFN--FQIDPQTYQ 215
+ ++ F G +D+ + RQ +D LR+LR RF R + + + T Q
Sbjct: 143 HGNVVDYF--GGIRDIETRRIAFVGDARQRIQEDYLRILRYFRFFGRISDCTEHEHDTIQ 200
Query: 216 AMRDPGIHQSFNHKISKGRVYTEMHK 241
A+ + ++ IS R++TE+ K
Sbjct: 201 AIVE---NKDGMAGISAERIWTELKK 223
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.138 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,415,751
Number of Sequences: 60738
Number of extensions: 1438121
Number of successful extensions: 3476
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3453
Number of HSP's gapped (non-prelim): 9
length of query: 489
length of database: 30,389,216
effective HSP length: 110
effective length of query: 379
effective length of database: 23,708,036
effective search space: 8985345644
effective search space used: 8985345644
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)