ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII4617 good K KOG1668 Transcription Elongation factor 1 beta/delta chain
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII4617 Similar to CA4862 CaEFB1 translation elongation
factor eEF1beta
(185 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YAL003w [K] KOG1668 Elongation factor 1 beta/delta chain 187 9e-48
SPCC1450.04 [K] KOG1668 Elongation factor 1 beta/delta chain 119 2e-27
CE00548 [K] KOG1668 Elongation factor 1 beta/delta chain 104 8e-23
7302868 [K] KOG1668 Elongation factor 1 beta/delta chain 103 1e-22
Hs4503479 [K] KOG1668 Elongation factor 1 beta/delta chain 102 2e-22
Hs22057527 [K] KOG1668 Elongation factor 1 beta/delta chain 100 9e-22
Hs22051469 [K] KOG1668 Elongation factor 1 beta/delta chain 99 3e-21
Hs4503477 [K] KOG1668 Elongation factor 1 beta/delta chain 99 3e-21
Hs14150205 [K] KOG1668 Elongation factor 1 beta/delta chain 98 6e-21
CE18378 [K] KOG1668 Elongation factor 1 beta/delta chain 93 2e-19
7297627 [K] KOG1668 Elongation factor 1 beta/delta chain 90 2e-18
7297626 [K] KOG1668 Elongation factor 1 beta/delta chain 90 2e-18
Hs17463402 [K] KOG1668 Elongation factor 1 beta/delta chain 82 4e-16
Hs22045475 [K] KOG1668 Elongation factor 1 beta/delta chain 79 4e-15
At1g30230 [K] KOG1668 Elongation factor 1 beta/delta chain 78 6e-15
At5g12110 [K] KOG1668 Elongation factor 1 beta/delta chain 77 2e-14
At2g18110 [K] KOG1668 Elongation factor 1 beta/delta chain 75 4e-14
Hs18573093 [K] KOG1668 Elongation factor 1 beta/delta chain 75 5e-14
Hs18566774 [K] KOG1668 Elongation factor 1 beta/delta chain 75 5e-14
At5g19510 [K] KOG1668 Elongation factor 1 beta/delta chain 75 5e-14
Hs17448940 [K] KOG1668 Elongation factor 1 beta/delta chain 67 1e-11
Hs20469472 [K] KOG1668 Elongation factor 1 beta/delta chain 34 0.100
Hs17456323 [K] KOG1668 Elongation factor 1 beta/delta chain 29 3.2
CE20035 [L] KOG3548 DNA damage checkpoint protein RHP9/CRB2/53BP1 28 7.2
CE20034 [L] KOG3548 DNA damage checkpoint protein RHP9/CRB2/53BP1 28 7.2
>YAL003w [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 206
Score = 187 bits (474), Expect = 9e-48
Identities = 101/181 (55%), Positives = 115/181 (62%), Gaps = 3/181 (1%)
Query: 6 TSATQADVSAFKAFQSTYPEFSRWFNHIASKADQFEXXXXXXXXXXXXXXXXXXXXXXXX 65
T+ +QADV+ FKAFQS YPEFSRWFNHIASKAD+F+
Sbjct: 28 TAVSQADVTVFKAFQSAYPEFSRWFNHIASKADEFDSFPAASAAAAEEEEDDDVDLFGSD 87
Query: 66 XXXXXXXXXAEQLKAKRIAEYN-EXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKN 124
AE+LKA+RIA YN + SIVTLDVKPWDDET+LEE+VANVK
Sbjct: 88 DEEADAE--AEKLKAERIAAYNAKKAAKPAKPAAKSIVTLDVKPWDDETNLEEMVANVKA 145
Query: 125 IEMDGLNWGAHQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXXXXHVQSTDVAAMQK 184
IEM+GL WGAHQ+IPIGFGIKKLQIN V+ED KVS HVQSTD+AAMQK
Sbjct: 146 IEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLDDLQQSIEEDEDHVQSTDIAAMQK 205
Query: 185 L 185
L
Sbjct: 206 L 206
>SPCC1450.04 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 214
Score = 119 bits (299), Expect = 2e-27
Identities = 69/184 (37%), Positives = 93/184 (50%), Gaps = 7/184 (3%)
Query: 9 TQADVSAFKAF-----QSTYPEFSRWFNHIASK--ADQFEXXXXXXXXXXXXXXXXXXXX 61
+QAD FKA + YP +RW+ IA+ A
Sbjct: 31 SQADAVVFKAVGVAPDTAKYPNGARWYKQIATYDLATLPGTAKEVSAYGPEGAAAAEEDE 90
Query: 62 XXXXXXXXXXXXXAEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVAN 121
AE++KA+R+AEYN+ S+VTLDVKPWDDET ++EL
Sbjct: 91 IDLFGSDEEEDPEAERIKAERVAEYNKKKAAKPKAVHKSLVTLDVKPWDDETPMDELEKA 150
Query: 122 VKNIEMDGLNWGAHQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXXXXHVQSTDVAA 181
V++I+MDGL WG + +P+GFG+ K QIN+V+ED KVS +VQSTD+AA
Sbjct: 151 VRSIQMDGLVWGLSKLVPVGFGVNKFQINLVVEDDKVSLEALQEELEGFEDYVQSTDIAA 210
Query: 182 MQKL 185
M KL
Sbjct: 211 MSKL 214
>CE00548 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 213
Score = 104 bits (259), Expect = 8e-23
Identities = 66/168 (39%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
Query: 21 STYPEFSRWFNHIASKADQFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEQLKA 80
STYP +RW+ ++AS D E AE+ K
Sbjct: 47 STYPNVARWYANVASYTDA-ERKTWASAGGSAPAAAAADGDDFDLFGSDDEEEDAEKAKI 105
Query: 81 --KRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGAHQWI 138
+R+A Y E S V LDVKPWDDETDL E+ V++IEMDGL WG + I
Sbjct: 106 VEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLI 165
Query: 139 PIGFGIKKLQINMVIEDAKVS-XXXXXXXXXXXXXHVQSTDVAAMQKL 185
PIG+GIKKLQI VIED KVS HVQS D+ A K+
Sbjct: 166 PIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVAFNKI 213
>7302868 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 222
Score = 103 bits (257), Expect = 1e-22
Identities = 53/111 (47%), Positives = 67/111 (59%)
Query: 75 AEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGA 134
AE++K +R+A Y S V LDVKPWDDETD++E+ NV+ IEMDGL WGA
Sbjct: 112 AERIKQERVAAYAAKKSKKPALIAKSSVLLDVKPWDDETDMKEMENNVRTIEMDGLLWGA 171
Query: 135 HQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXXXXHVQSTDVAAMQKL 185
+ +P+G+GI KLQI VIED KVS VQS D+AA K+
Sbjct: 172 SKLVPVGYGINKLQIMCVIEDDKVSIDLLQEKIEEFEDFVQSVDIAAFNKI 222
>Hs4503479 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 281
Score = 102 bits (255), Expect = 2e-22
Identities = 49/111 (44%), Positives = 68/111 (61%)
Query: 75 AEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGA 134
A QL+ +R+ +Y E S + LDVKPWDDETD+ +L A V++I++DGL WGA
Sbjct: 171 AAQLREERLRQYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGA 230
Query: 135 HQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXXXXHVQSTDVAAMQKL 185
+ +P+G+GI+KLQI V+ED KV HVQS D+AA K+
Sbjct: 231 SKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNKI 281
>Hs22057527 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 225
Score = 100 bits (250), Expect = 9e-22
Identities = 61/195 (31%), Positives = 86/195 (43%), Gaps = 18/195 (9%)
Query: 9 TQADVSAFKAFQSTYP----EFSRWFNHIASKADQFEXX--------------XXXXXXX 50
+QADV+ F+A S P RW+NHI S +
Sbjct: 31 SQADVAVFEAVSSPLPADLCHALRWYNHIKSYEKEKASLPGVKKALGKYGPADVEDTTGS 90
Query: 51 XXXXXXXXXXXXXXXXXXXXXXXXAEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWD 110
A++L+ +R+A+Y S + LDVKPWD
Sbjct: 91 GATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSSILLDVKPWD 150
Query: 111 DETDLEELVANVKNIEMDGLNWGAHQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXX 170
DETD+ +L V++I+ DGL WG+ + +P+G+GIKKLQI V+ED KV
Sbjct: 151 DETDMAKLEERVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAF 210
Query: 171 XXHVQSTDVAAMQKL 185
+VQS DVAA K+
Sbjct: 211 EDYVQSMDVAAFNKI 225
>Hs22051469 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 256
Score = 99.4 bits (246), Expect = 3e-21
Identities = 50/111 (45%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 75 AEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGA 134
A QL+ +R+ +Y E SI+ LDVKPWDDETD+ +L A V++IE+DGL WG
Sbjct: 147 AAQLREERLRQYAEKAKKPALVAKSSIL-LDVKPWDDETDMAQLEACVRSIELDGLVWGT 205
Query: 135 HQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXXXXHVQSTDVAAMQKL 185
+ +P+G+GI+KLQI V+ED KV HVQS D+AA K+
Sbjct: 206 SKLMPVGYGIRKLQIQCVVEDDKVGTYLLEEEITKFEEHVQSVDIAAFNKI 256
>Hs4503477 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 225
Score = 99.0 bits (245), Expect = 3e-21
Identities = 61/195 (31%), Positives = 86/195 (43%), Gaps = 18/195 (9%)
Query: 9 TQADVSAFKAFQSTYP----EFSRWFNHIASKADQFEXX--------------XXXXXXX 50
+QADV+ F+A S P RW+NHI S +
Sbjct: 31 SQADVAVFEAVSSPPPADLCHALRWYNHIKSYEKEKASLPGVKKALGKYGPADVEDTTGS 90
Query: 51 XXXXXXXXXXXXXXXXXXXXXXXXAEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWD 110
A++L+ +R+A+Y S + LDVKPWD
Sbjct: 91 GATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSSILLDVKPWD 150
Query: 111 DETDLEELVANVKNIEMDGLNWGAHQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXX 170
DETD+ +L V++I+ DGL WG+ + +P+G+GIKKLQI V+ED KV
Sbjct: 151 DETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAF 210
Query: 171 XXHVQSTDVAAMQKL 185
+VQS DVAA K+
Sbjct: 211 EDYVQSMDVAAFNKI 225
>Hs14150205 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 647
Score = 98.2 bits (243), Expect = 6e-21
Identities = 47/111 (42%), Positives = 67/111 (60%)
Query: 75 AEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGA 134
A QL+ +R+ +Y E S + LDVKPWDDETD+ +L A V++I++DGL WGA
Sbjct: 537 AAQLREERLRQYAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGA 596
Query: 135 HQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXXXXHVQSTDVAAMQKL 185
+ +P+G+GI+KLQI ++EDAKV VQS D+ A K+
Sbjct: 597 SKLVPVGYGIRKLQIQCLVEDAKVGTNLVEEEIPKFEERVQSVDIPAFNKI 647
>CE18378 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 285
Score = 92.8 bits (229), Expect = 2e-19
Identities = 52/106 (49%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Query: 81 KRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGAHQWIPI 140
+R+A Y S V LDVKPWDDETDL E+ V++IEMDGL WG + IPI
Sbjct: 180 ERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPI 239
Query: 141 GFGIKKLQINMVIEDAKVS-XXXXXXXXXXXXXHVQSTDVAAMQKL 185
G+GIKKLQI VIED KVS HVQS D+ A K+
Sbjct: 240 GYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVAFNKI 285
>7297627 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 229
Score = 90.1 bits (222), Expect = 2e-18
Identities = 44/111 (39%), Positives = 63/111 (56%)
Query: 75 AEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGA 134
A +++ +R+A Y S + LDVKPWDDETDL+ + ++ I DGL WGA
Sbjct: 119 AARIREERLAAYAAKKAKKVQIIAKSNIILDVKPWDDETDLKVMETEIRKITQDGLLWGA 178
Query: 135 HQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXXXXHVQSTDVAAMQKL 185
+++P+ FGI+KL I+ V+ED KVS VQS D+AA K+
Sbjct: 179 SKFVPVAFGIQKLSISCVVEDDKVSIDWLTEEIEKLEDFVQSVDIAAFNKI 229
>7297626 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 256
Score = 90.1 bits (222), Expect = 2e-18
Identities = 44/111 (39%), Positives = 63/111 (56%)
Query: 75 AEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGA 134
A +++ +R+A Y S + LDVKPWDDETDL+ + ++ I DGL WGA
Sbjct: 146 AARIREERLAAYAAKKAKKVQIIAKSNIILDVKPWDDETDLKVMETEIRKITQDGLLWGA 205
Query: 135 HQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXXXXHVQSTDVAAMQKL 185
+++P+ FGI+KL I+ V+ED KVS VQS D+AA K+
Sbjct: 206 SKFVPVAFGIQKLSISCVVEDDKVSIDWLTEEIEKLEDFVQSVDIAAFNKI 256
>Hs17463402 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 185
Score = 82.0 bits (201), Expect = 4e-16
Identities = 42/111 (37%), Positives = 66/111 (58%), Gaps = 1/111 (0%)
Query: 75 AEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGA 134
A +L+ +R+ Y + SI+ LD+KPWD++TD+ +L A V++I++DGL GA
Sbjct: 76 ARRLREERLRLYAKKAKNPSLVAKSSIL-LDIKPWDNKTDMTQLEACVRSIQLDGLVSGA 134
Query: 135 HQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXXXXHVQSTDVAAMQKL 185
+ +G+GI+K+QI V+ED KV HVQS D+AA+ K+
Sbjct: 135 SKLASVGYGIRKMQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAALNKI 185
>Hs22045475 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 336
Score = 79.0 bits (193), Expect = 4e-15
Identities = 36/86 (41%), Positives = 54/86 (61%)
Query: 100 SIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGAHQWIPIGFGIKKLQINMVIEDAKVS 159
S + LDVKPWD+ETD+ +L A ++I++D L WGA + +P+G+GI+KLQI V+ED K+
Sbjct: 103 SSILLDVKPWDNETDMAQLEACARSIQLDRLVWGASKLVPMGYGIQKLQIQCVMEDDKLG 162
Query: 160 XXXXXXXXXXXXXHVQSTDVAAMQKL 185
HVQ ++ A K+
Sbjct: 163 TDLLEEEITKFEEHVQPVNITAFNKI 188
>At1g30230 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 242
Score = 78.2 bits (191), Expect = 6e-15
Identities = 40/89 (44%), Positives = 55/89 (60%), Gaps = 3/89 (3%)
Query: 100 SIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGAHQWIPIGFGIKKLQINMVIEDAKVS 159
S V +D+KPWDDETD+++L VK+I+M+GL WGA + +P+G+GIKKLQI I D VS
Sbjct: 143 SSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDLVS 202
Query: 160 XXXXXXXXXX---XXXHVQSTDVAAMQKL 185
+VQS D+ A K+
Sbjct: 203 IDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
>At5g12110 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 228
Score = 76.6 bits (187), Expect = 2e-14
Identities = 38/89 (42%), Positives = 54/89 (59%), Gaps = 3/89 (3%)
Query: 100 SIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGAHQWIPIGFGIKKLQINMVIEDAKVS 159
S V L+VKPWDDETD+++L V++++M GL WGA + +P+G+GIKKL I M I D VS
Sbjct: 140 SSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDDLVS 199
Query: 160 XXXXXXXXXXX---XXHVQSTDVAAMQKL 185
++QS D+ A K+
Sbjct: 200 VDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228
>At2g18110 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 231
Score = 75.5 bits (184), Expect = 4e-14
Identities = 38/89 (42%), Positives = 54/89 (59%), Gaps = 3/89 (3%)
Query: 100 SIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGAHQWIPIGFGIKKLQINMVIEDAKVS 159
S V +D+KPWDDETD+++L V++I+M+GL WGA + +P+G+GIKKL I I D VS
Sbjct: 143 SSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDLVS 202
Query: 160 XXXXXXXXXX---XXXHVQSTDVAAMQKL 185
+VQS D+ A K+
Sbjct: 203 IDTMIEEQLTVEPINEYVQSCDIVAFNKI 231
>Hs18573093 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 274
Score = 75.1 bits (183), Expect = 5e-14
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 75 AEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGA 134
A QL+ +R+ +Y E S + LD KPWDDETD+ +L A V +I+++ L
Sbjct: 171 AAQLQEERLQQYAEKKAKKPELVAKSSILLDFKPWDDETDMAQLEACVCSIQLEEL---- 226
Query: 135 HQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXXXXHVQSTDVAAMQKL 185
+P+G+GI+KLQI V+ED KV HVQS D+AA K+
Sbjct: 227 --LVPMGYGIRKLQIQCVVEDDKVG-TDLLEEITKFEEHVQSVDIAAFNKI 274
>Hs18566774 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 180
Score = 75.1 bits (183), Expect = 5e-14
Identities = 50/181 (27%), Positives = 74/181 (40%), Gaps = 8/181 (4%)
Query: 9 TQADVSAFKAFQSTYP----EFSRWFNHIASKADQFEXXXXXXXXXXXXXXXXXXXXXXX 64
+QADV+ F+A P RW+NHI S +
Sbjct: 4 SQADVAVFEAVSGPPPADLCHALRWYNHIKSYEKEKAGLPGVKKALSKYGPADVEDTTGS 63
Query: 65 XXXXXXXXXXAEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKN 124
+ + +Y E + + K +DETD+ +L V++
Sbjct: 64 GATDSKDDDDIDLFGS----DYEEESEEAKRLREEHLAQYESKKANDETDMAKLEECVRS 119
Query: 125 IEMDGLNWGAHQWIPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXXXXHVQSTDVAAMQK 184
I+ DGL WG+ + +P+G+GIKKLQI V+ED KV +VQS DVAA K
Sbjct: 120 IQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNK 179
Query: 185 L 185
+
Sbjct: 180 I 180
>At5g19510 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 224
Score = 75.1 bits (183), Expect = 5e-14
Identities = 49/174 (28%), Positives = 70/174 (40%), Gaps = 11/174 (6%)
Query: 23 YPEFSRWFNHIAS--------KADQFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 74
+P S+W+ +AS KA +
Sbjct: 51 FPNASKWYESVASQLAKSFPGKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDET 110
Query: 75 AEQLKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGA 134
E+ KA E + S V +DVKPWDDETD+++L V+ +EM GL WGA
Sbjct: 111 EEEKKAAEEREAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGA 170
Query: 135 HQWIPIGFGIKKLQINMVIEDAKVS---XXXXXXXXXXXXXHVQSTDVAAMQKL 185
+ +P+G+GIKKL I I D VS ++QS D+ A K+
Sbjct: 171 SKLVPVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224
>Hs17448940 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 215
Score = 67.0 bits (162), Expect = 1e-11
Identities = 35/108 (32%), Positives = 54/108 (49%), Gaps = 8/108 (7%)
Query: 78 LKAKRIAEYNEXXXXXXXXXXXSIVTLDVKPWDDETDLEELVANVKNIEMDGLNWGAHQW 137
L+ +R+ +Y E S + LD+KPWDDET++ +L A GA +
Sbjct: 116 LREERLRQYTEKKAKKPMLVAESSILLDIKPWDDETNMAQLEACWSG--------GASKL 167
Query: 138 IPIGFGIKKLQINMVIEDAKVSXXXXXXXXXXXXXHVQSTDVAAMQKL 185
+P+G+ I+KL + V+ED KV HVQ+ D+AA K+
Sbjct: 168 VPVGYSIQKLLVQCVVEDDKVGTDLLEEEIIKFEEHVQNVDIAAFNKI 215
>Hs20469472 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 132
Score = 34.3 bits (77), Expect = 0.100
Identities = 14/26 (53%), Positives = 19/26 (72%)
Query: 105 DVKPWDDETDLEELVANVKNIEMDGL 130
DVKPWDD D+ +L V++I+ DGL
Sbjct: 106 DVKPWDDVADMAKLEECVRSIQADGL 131
>Hs17456323 [K] KOG1668 Elongation factor 1 beta/delta chain
Length = 122
Score = 29.3 bits (64), Expect = 3.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 138 IPIGFGIKKLQINMVIEDAK 157
IP+G+ KKLQI V+ED K
Sbjct: 86 IPVGYRFKKLQIQCVVEDDK 105
>CE20035 [L] KOG3548 DNA damage checkpoint protein RHP9/CRB2/53BP1
Length = 685
Score = 28.1 bits (61), Expect = 7.2
Identities = 13/52 (25%), Positives = 29/52 (55%)
Query: 108 PWDDETDLEELVANVKNIEMDGLNWGAHQWIPIGFGIKKLQINMVIEDAKVS 159
P+D +T++E +KNI M+ N+GA ++ +G K + +++++
Sbjct: 90 PYDLDTEMEHHPEPLKNIHMEVHNFGAVKYAKLGNSESKYSMTEKAAESRIA 141
>CE20034 [L] KOG3548 DNA damage checkpoint protein RHP9/CRB2/53BP1
Length = 1151
Score = 28.1 bits (61), Expect = 7.2
Identities = 13/52 (25%), Positives = 29/52 (55%)
Query: 108 PWDDETDLEELVANVKNIEMDGLNWGAHQWIPIGFGIKKLQINMVIEDAKVS 159
P+D +T++E +KNI M+ N+GA ++ +G K + +++++
Sbjct: 556 PYDLDTEMEHHPEPLKNIHMEVHNFGAVKYAKLGNSESKYSMTEKAAESRIA 607
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.128 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,351,946
Number of Sequences: 60738
Number of extensions: 166527
Number of successful extensions: 405
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 372
Number of HSP's gapped (non-prelim): 27
length of query: 185
length of database: 30,389,216
effective HSP length: 100
effective length of query: 85
effective length of database: 24,315,416
effective search space: 2066810360
effective search space used: 2066810360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)