ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIII4705  suspect: LH   T     KOG0116  Signal transduction mechanisms                                 RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII4705 1668795 1667317 -493 
         (493 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YNR051c_1 [T] KOG0116 RasGAP SH3 binding protein rasputin contai...   141   3e-33

>YNR051c_1 [T] KOG0116 RasGAP SH3 binding protein rasputin contains NTF2 and
           RRM domains
          Length = 207

 Score =  141 bits (355), Expect = 3e-33
 Identities = 69/138 (50%), Positives = 94/138 (68%), Gaps = 2/138 (1%)

Query: 6   VKEIGYAFLRTYYERMHNDPSKLSCLYSTTAELTHVNYNEPIKHDKD-YLNTVKLIGKDN 64
           V++I +AFL+ YYERM  DPSKL+  Y++TAELTH NY     ++KD  L TVK+ G++N
Sbjct: 5   VQDICFAFLQNYYERMRTDPSKLAYFYASTAELTHTNYQSKSTNEKDDVLPTVKVTGREN 64

Query: 65  INNFFTRNSKRVQDLKVKIDSCDVQSTGYEXXXXXXXXXGELCWTDSPSYRFCQCFILEP 124
           IN FF+RN  +V+ LK+K+D+ D Q TG+          GE+ WT +P Y+FCQ FIL P
Sbjct: 65  INKFFSRNDAKVRSLKLKLDTIDFQYTGHLHKSILIMATGEMFWTGTPVYKFCQTFILLP 124

Query: 125 AEYNSKVYDLKNDIIRFI 142
           +  N   +D+ NDIIRFI
Sbjct: 125 SS-NGSTFDITNDIIRFI 141


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.311    0.130    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,969,205
Number of Sequences: 60738
Number of extensions: 766527
Number of successful extensions: 1402
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1399
Number of HSP's gapped (non-prelim): 1
length of query: 493
length of database: 30,389,216
effective HSP length: 110
effective length of query: 383
effective length of database: 23,708,036
effective search space: 9080177788
effective search space used: 9080177788
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)