ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII4719 good R KOG2423 General function prediction only Nucleolar GTPase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII4719 1672278 1671448 -277
(277 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YNR053c [R] KOG2423 Nucleolar GTPase 383 e-106
SPAC6F6.03c [R] KOG2423 Nucleolar GTPase 318 5e-87
Hs7019419 [R] KOG2423 Nucleolar GTPase 264 1e-70
CE20084 [R] KOG2423 Nucleolar GTPase 261 6e-70
CE20083 [R] KOG2423 Nucleolar GTPase 261 6e-70
At1g52980 [R] KOG2423 Nucleolar GTPase 250 1e-66
7302756 [R] KOG2423 Nucleolar GTPase 248 9e-66
ECU09g1650 [R] KOG2423 Nucleolar GTPase 219 3e-57
At3g07050 [R] KOG2484 GTPase 127 2e-29
CE02270 [R] KOG2484 GTPase 125 7e-29
Hs9506611 [R] KOG2484 GTPase 122 7e-28
7300220 [R] KOG2484 GTPase 109 4e-24
Hs7657048 [R] KOG2484 GTPase 97 3e-20
SPBC26H8.08c [R] KOG2484 GTPase 94 3e-19
At2g27200 [R] KOG1424 Predicted GTP-binding protein MMR1 93 4e-19
At1g08410 [R] KOG1424 Predicted GTP-binding protein MMR1 93 5e-19
7290165 [R] KOG1424 Predicted GTP-binding protein MMR1 88 2e-17
Hs14149720 [R] KOG1424 Predicted GTP-binding protein MMR1 84 2e-16
SPAC3F10.16c [R] KOG1424 Predicted GTP-binding protein MMR1 83 4e-16
YER006w [R] KOG2484 GTPase 82 6e-16
CE26362 [R] KOG1424 Predicted GTP-binding protein MMR1 82 1e-15
YGL099w [R] KOG1424 Predicted GTP-binding protein MMR1 78 2e-14
Hs13376500 [R] KOG2484 GTPase 77 2e-14
7298708 [R] KOG1424 Predicted GTP-binding protein MMR1 70 4e-12
ECU08g0240 [R] KOG1424 Predicted GTP-binding protein MMR1 69 7e-12
At4g02790 [R] KOG2484 GTPase 66 6e-11
SPBC25B2.04c [R] KOG2485 Conserved ATP/GTP binding protein 64 3e-10
Hs4885289 [R] KOG1424 Predicted GTP-binding protein MMR1 61 2e-09
Hs20555662 [R] KOG1424 Predicted GTP-binding protein MMR1 61 2e-09
7300920 [R] KOG2485 Conserved ATP/GTP binding protein 49 6e-06
>YNR053c [R] KOG2423 Nucleolar GTPase
Length = 486
Score = 383 bits (984), Expect = e-106
Identities = 190/229 (82%), Positives = 205/229 (88%), Gaps = 8/229 (3%)
Query: 1 MESTPSRKHNWLLIHICDYNFTNTIFPIFDSQQAAWVKHLSKERPTLAFHASITNSFGKG 60
M+ KH +++ CD + P + + AAWVKHLSKERPTLAFHASITNSFGKG
Sbjct: 246 MKKETPHKHLIYVLNKCD------LVPTWVA--AAWVKHLSKERPTLAFHASITNSFGKG 297
Query: 61 SLIQLLRQFSQLHKDRHQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYIT 120
SLIQLLRQFSQLH DR QISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYIT
Sbjct: 298 SLIQLLRQFSQLHTDRKQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYIT 357
Query: 121 LMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYE 180
LMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHV+HPEQYIPG+LKRC+ +HLERTYE
Sbjct: 358 LMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVTHPEQYIPGVLKRCQVKHLERTYE 417
Query: 181 ISGWKDSVDFIEMIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFV 229
ISGWKD+ +FIE++ARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFV
Sbjct: 418 ISGWKDATEFIEILARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFV 466
>SPAC6F6.03c [R] KOG2423 Nucleolar GTPase
Length = 537
Score = 318 bits (815), Expect = 5e-87
Identities = 155/229 (67%), Positives = 183/229 (79%), Gaps = 8/229 (3%)
Query: 1 MESTPSRKHNWLLIHICDYNFTNTIFPIFDSQQAAWVKHLSKERPTLAFHASITNSFGKG 60
+ + S KH L+++ D T S AAWVK L+KE PT+AFHASI NSFGKG
Sbjct: 241 LRNEASHKHMILVLNKVDLVPT--------SVAAAWVKILAKEYPTIAFHASINNSFGKG 292
Query: 61 SLIQLLRQFSQLHKDRHQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYIT 120
SLIQ+LRQF+ LH D+ QISVG IG+PN GKSSIINTLRKKKVC VAPIPGETKVWQY+
Sbjct: 293 SLIQILRQFASLHSDKKQISVGLIGFPNAGKSSIINTLRKKKVCNVAPIPGETKVWQYVA 352
Query: 121 LMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYE 180
LMKRIFLIDCPGIVPPSS DS+ ++L +GVVRVE+VS+PE YIP +L RCK +HLERTYE
Sbjct: 353 LMKRIFLIDCPGIVPPSSNDSDAELLLKGVVRVENVSNPEAYIPTVLSRCKVKHLERTYE 412
Query: 181 ISGWKDSVDFIEMIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFV 229
ISGW DS +F+ +A+K GRLLKGGEPDE+ V+K +LNDF RGKIPWF+
Sbjct: 413 ISGWNDSTEFLAKLAKKGGRLLKGGEPDEASVAKMVLNDFMRGKIPWFI 461
>Hs7019419 [R] KOG2423 Nucleolar GTPase
Length = 731
Score = 264 bits (674), Expect = 1e-70
Identities = 129/222 (58%), Positives = 170/222 (76%), Gaps = 9/222 (4%)
Query: 8 KHNWLLIHICDYNFTNTIFPIFDSQQAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLR 67
KH +++ CD + P + +++ WV LS++ PTLAFHAS+TN FGKG+ IQLLR
Sbjct: 248 KHLIFVLNKCD------LVPTWATKR--WVAVLSQDYPTLAFHASLTNPFGKGAFIQLLR 299
Query: 68 QFSQLHKDRHQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFL 127
QF +LH D+ QISVGFIGYPN GKSS+INTLR KKVC VAPI GETKVWQYITLM+RIFL
Sbjct: 300 QFGKLHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKVWQYITLMRRIFL 359
Query: 128 IDCPGIVPPSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISGWKDS 187
IDCPG+V P S+DSE DI+ +GVV+VE + PE +I +L+R K +++ +TY+I W+++
Sbjct: 360 IDCPGVVYP-SEDSETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYISKTYKIDSWENA 418
Query: 188 VDFIEMIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFV 229
DF+E +A + G+LLKGGEPD V K +LND+ RG+IP+FV
Sbjct: 419 EDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFV 460
>CE20084 [R] KOG2423 Nucleolar GTPase
Length = 639
Score = 261 bits (668), Expect = 6e-70
Identities = 126/194 (64%), Positives = 153/194 (77%), Gaps = 1/194 (0%)
Query: 36 WVKHLSKERPTLAFHASITNSFGKGSLIQLLRQFSQLHKDRHQISVGFIGYPNTGKSSII 95
W+ LSKE PT+AFHASI NSFGKG++I LLRQF++LH DR QISVGFIGYPN GKSS++
Sbjct: 224 WIGELSKEMPTIAFHASINNSFGKGAVINLLRQFAKLHPDRPQISVGFIGYPNVGKSSLV 283
Query: 96 NTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEH 155
NTLRKKKVC+ API GETKVWQY+ LM+RI+LID PG+V P DSE I+ +GVVRVE+
Sbjct: 284 NTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYPQG-DSETQIILKGVVRVEN 342
Query: 156 VSHPEQYIPGILKRCKRQHLERTYEISGWKDSVDFIEMIARKQGRLLKGGEPDESGVSKQ 215
V PE ++ G+L RCK +HL R Y I + D DF+ IA KQGRLLKGG+PD VSK
Sbjct: 343 VKDPENHVQGVLDRCKPEHLRRQYGIPEFTDVDDFLTKIAIKQGRLLKGGDPDIVAVSKV 402
Query: 216 ILNDFNRGKIPWFV 229
+LN+F RGK+P+FV
Sbjct: 403 VLNEFQRGKLPYFV 416
>CE20083 [R] KOG2423 Nucleolar GTPase
Length = 698
Score = 261 bits (668), Expect = 6e-70
Identities = 126/194 (64%), Positives = 153/194 (77%), Gaps = 1/194 (0%)
Query: 36 WVKHLSKERPTLAFHASITNSFGKGSLIQLLRQFSQLHKDRHQISVGFIGYPNTGKSSII 95
W+ LSKE PT+AFHASI NSFGKG++I LLRQF++LH DR QISVGFIGYPN GKSS++
Sbjct: 283 WIGELSKEMPTIAFHASINNSFGKGAVINLLRQFAKLHPDRPQISVGFIGYPNVGKSSLV 342
Query: 96 NTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEH 155
NTLRKKKVC+ API GETKVWQY+ LM+RI+LID PG+V P DSE I+ +GVVRVE+
Sbjct: 343 NTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVYPQG-DSETQIILKGVVRVEN 401
Query: 156 VSHPEQYIPGILKRCKRQHLERTYEISGWKDSVDFIEMIARKQGRLLKGGEPDESGVSKQ 215
V PE ++ G+L RCK +HL R Y I + D DF+ IA KQGRLLKGG+PD VSK
Sbjct: 402 VKDPENHVQGVLDRCKPEHLRRQYGIPEFTDVDDFLTKIAIKQGRLLKGGDPDIVAVSKV 461
Query: 216 ILNDFNRGKIPWFV 229
+LN+F RGK+P+FV
Sbjct: 462 VLNEFQRGKLPYFV 475
>At1g52980 [R] KOG2423 Nucleolar GTPase
Length = 576
Score = 250 bits (639), Expect = 1e-66
Identities = 123/222 (55%), Positives = 165/222 (73%), Gaps = 9/222 (4%)
Query: 8 KHNWLLIHICDYNFTNTIFPIFDSQQAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLR 67
KH LL++ CD + P + ++ W++ LSKE PTLAFHAS+ SFGKGSL+ +LR
Sbjct: 247 KHMILLLNKCD------LVPAWATK--GWLRVLSKEYPTLAFHASVNKSFGKGSLLSVLR 298
Query: 68 QFSQLHKDRHQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFL 127
QF++L D+ ISVGF+GYPN GKSS+INTLR K VC+VAPIPGETKVWQYITL KRIFL
Sbjct: 299 QFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFL 358
Query: 128 IDCPGIVPPSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISGWKDS 187
IDCPG+V S+D+E DI+ +GVVRV ++ ++I +L+R K++HL+R Y+I W+D
Sbjct: 359 IDCPGVV-YQSRDTETDIVLKGVVRVTNLEDASEHIGEVLRRVKKEHLQRAYKIKDWEDD 417
Query: 188 VDFIEMIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFV 229
DF+ + + G+LLKGGEPD +K IL+D+ RG+IP+FV
Sbjct: 418 HDFLLQLCKSSGKLLKGGEPDLMTGAKMILHDWQRGRIPFFV 459
>7302756 [R] KOG2423 Nucleolar GTPase
Length = 674
Score = 248 bits (632), Expect = 9e-66
Identities = 120/222 (54%), Positives = 165/222 (74%), Gaps = 9/222 (4%)
Query: 8 KHNWLLIHICDYNFTNTIFPIFDSQQAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLR 67
KH + +++ D + P++ +Q+ WV LS E PT+AFHAS+ + FGKG+LI L R
Sbjct: 253 KHLFFILNKVD------LVPVWVTQR--WVAILSAEYPTIAFHASLQHPFGKGALINLFR 304
Query: 68 QFSQLHKDRHQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFL 127
Q +LH D+ QISVGFIGYPN GKSS+IN LR KKVC+VAPI GETKVWQYITLMKRIFL
Sbjct: 305 QLGKLHLDKKQISVGFIGYPNVGKSSVINALRSKKVCKVAPIAGETKVWQYITLMKRIFL 364
Query: 128 IDCPGIVPPSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISGWKDS 187
IDCPG+V P+++ E +L +GVVRVE V++PE Y+ +LKR + +++ + Y+I W S
Sbjct: 365 IDCPGVVYPTAETDTEKVL-KGVVRVELVTNPEDYVDSLLKRVRPEYISKNYKIEHWNTS 423
Query: 188 VDFIEMIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFV 229
F+E +A+K G+LLKGGEPD + ++ +LND+ RGK+P++V
Sbjct: 424 THFLEQLAQKTGKLLKGGEPDVTVTARMVLNDWQRGKLPFYV 465
>ECU09g1650 [R] KOG2423 Nucleolar GTPase
Length = 418
Score = 219 bits (559), Expect = 3e-57
Identities = 112/197 (56%), Positives = 152/197 (76%), Gaps = 7/197 (3%)
Query: 34 AAWVKHLSKERPTLAFHA-SITNSFGKGSLIQLLRQFSQLHKDRHQISVGFIGYPNTGKS 92
A W++H S+ PT+A+H+ SITN++GK +LI LL+Q S+L+K H +SVGF+GYPNTGKS
Sbjct: 219 AKWLRHFSRLHPTIAYHSNSITNNYGKANLISLLKQLSKLYKKSH-LSVGFVGYPNTGKS 277
Query: 93 SIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVR 152
SIINTLR K+VC+VAPIPGETKVWQYITL + I+LIDCPGIVP S+ D + RG VR
Sbjct: 278 SIINTLRNKEVCKVAPIPGETKVWQYITLTRGIYLIDCPGIVPISNYD---QAVLRGAVR 334
Query: 153 VEHVSHPEQYIPGILKRCKRQHLERTYEISGWKDSVDFIEMIARKQGRLLKGGEPDESGV 212
+E++ +PE Y+ I+++ R + +TY+I + DS D +E +A K G+L KGGEP+ + V
Sbjct: 335 IENIENPEDYVDMIVEKA-RDSIVKTYKIR-FLDSADLVERLAIKFGKLQKGGEPNTNVV 392
Query: 213 SKQILNDFNRGKIPWFV 229
SK IL+D+ RGKIP+FV
Sbjct: 393 SKMILHDWVRGKIPYFV 409
>At3g07050 [R] KOG2484 GTPase
Length = 582
Score = 127 bits (319), Expect = 2e-29
Identities = 71/216 (32%), Positives = 114/216 (51%), Gaps = 23/216 (10%)
Query: 36 WVKHLSKERPTLAFHASI-----------------------TNSFGKGSLIQLLRQFSQL 72
W+ +L +E P +AF S ++ G +LI+LL+ +S+
Sbjct: 188 WLMYLREEFPAVAFKCSTQEQRSNLGWKSSKASKPSNMLQTSDCLGADTLIKLLKNYSRS 247
Query: 73 HKDRHQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPG 132
H+ + I+VG IG PN GKSS+IN+L++ V V PG T+ Q + L K + L+DCPG
Sbjct: 248 HELKKSITVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQEVHLDKNVKLLDCPG 307
Query: 133 IVPPSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISGWKDSVDFIE 192
+V S ++ I R R+E + P + ILK C + L Y+I ++ DF+
Sbjct: 308 VVMLKSSGNDASIALRNCKRIEKLDDPVSPVKEILKLCPKDMLVTLYKIPSFEAVDDFLY 367
Query: 193 MIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWF 228
+A +G+L KGG D ++ +L+D+N GKIP++
Sbjct: 368 KVATVRGKLKKGGLVDIDAAARIVLHDWNEGKIPYY 403
>CE02270 [R] KOG2484 GTPase
Length = 556
Score = 125 bits (314), Expect = 7e-29
Identities = 65/214 (30%), Positives = 118/214 (54%), Gaps = 21/214 (9%)
Query: 36 WVKHLSKERPTLAFHASI--------------------TNSFGKGSLIQLLRQFSQLHKD 75
W+++L + PT+AF AS + G ++++L + +
Sbjct: 197 WLEYLRGQFPTIAFKASTQEQKSNIGRFNSAILNNTETSKCVGADIVMKILANYCRNKDI 256
Query: 76 RHQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVP 135
+ I VG +G+PN GKSS+IN+L+++K C V +PG TK Q + L K I LID PG++
Sbjct: 257 KTSIRVGVVGFPNVGKSSVINSLKRRKACNVGNLPGITKEIQEVELDKNIRLIDSPGVIL 316
Query: 136 PSSKDSEE-DILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISGWKDSVDFIEMI 194
S KD + ++ + +RV+++ P + IL+RC ++ + Y ++ + F+ +
Sbjct: 317 VSQKDLDPIEVALKNAIRVDNLLDPIAPVHAILRRCSKETIMLHYNLADFNSVDQFLAQL 376
Query: 195 ARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWF 228
AR+ G+L +G PD + +K++LND+N GK+ ++
Sbjct: 377 ARRIGKLRRGARPDVNAAAKRVLNDWNTGKLRYY 410
>Hs9506611 [R] KOG2484 GTPase
Length = 582
Score = 122 bits (305), Expect = 7e-28
Identities = 70/218 (32%), Positives = 114/218 (52%), Gaps = 26/218 (11%)
Query: 36 WVKHLSKERPTLAFHASITNS------------------------FGKGSLIQLLRQFSQ 71
W+ +L E PT+AF AS + FG +L+++L + +
Sbjct: 186 WLDYLRNELPTVAFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNYCR 245
Query: 72 LHKDRHQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCP 131
L + R I VG +G PN GKSS+IN+L++ + C V +PG TK Q + L K I L+D P
Sbjct: 246 LGEVRTHIRVGVVGLPNVGKSSLINSLKRSRACSVGAVPGITKFMQEVYLDKFIRLLDAP 305
Query: 132 GIVPPSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISGWKDSVDFI 191
GIVP +SE + R V V+ ++ P + IL+RC + + Y +SG++ + F+
Sbjct: 306 GIVP--GPNSEVGTILRNCVHVQKLADPVTPVETILQRCNLEEISNYYGVSGFQTTEHFL 363
Query: 192 EMIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFV 229
+A + G+ KGG + +K +L D+ GKI +++
Sbjct: 364 TAVAHRLGKKKKGGLYSQEQAAKAVLADWVSGKISFYI 401
>7300220 [R] KOG2484 GTPase
Length = 581
Score = 109 bits (273), Expect = 4e-24
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 36 WVKHLSKERPTLAFHASITNS-----------------------FGKGSLIQLLRQFSQL 72
W+K+ + P AF AS + G L+ +L + +
Sbjct: 202 WIKYFRRSGPVTAFKASTQDQANRLGRRKLREMKTEKAMQGSVCIGAELLMSMLGNYCRN 261
Query: 73 HKDRHQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPG 132
+ I VG +G PN GKSSIIN+L + + C V PG TK Q + L +I LIDCPG
Sbjct: 262 KGIKTSIRVGVVGIPNVGKSSIINSLTRGRSCMVGSTPGVTKSMQEVELDSKIKLIDCPG 321
Query: 133 IVPPSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISGWKDSVDFIE 192
IV S ++ +L + RV V P +LKR +++ Y+I+ + +F
Sbjct: 322 IVFTSGGENSHAVL-KNAQRVGDVKDPFTIAESVLKRASKEYFCTMYDITNYDTFEEFFA 380
Query: 193 MIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPW 227
A + G+ LK G PD ++ +LND+N GKI +
Sbjct: 381 KKAARMGKFLKKGVPDVVAAARSVLNDWNTGKIKY 415
>Hs7657048 [R] KOG2484 GTPase
Length = 560
Score = 97.1 bits (240), Expect = 3e-20
Identities = 65/217 (29%), Positives = 109/217 (49%), Gaps = 27/217 (12%)
Query: 35 AWVKHLSKERPTLAFHAS--------ITNS---------------FGKGSLIQLLRQFSQ 71
+W+ +L KE PT+ F AS IT FGK L +LL F +
Sbjct: 190 SWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQE 249
Query: 72 LHKDRHQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCP 131
I VG IG+PN GKSSIIN+L+++++C V G T+ Q + L K+I +ID P
Sbjct: 250 TCSKA--IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSP 307
Query: 132 GIVPPSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISGWKDSVDFI 191
+ S +S + R +E V P + IL + + + Y + G+++S++F
Sbjct: 308 SFI-VSPLNSSSALALRSPASIE-VVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFF 365
Query: 192 EMIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWF 228
M+A+++G KGG P+ G +K + +++ + ++
Sbjct: 366 TMLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYY 402
>SPBC26H8.08c [R] KOG2484 GTPase
Length = 470
Score = 93.6 bits (231), Expect = 3e-19
Identities = 69/225 (30%), Positives = 108/225 (47%), Gaps = 33/225 (14%)
Query: 36 WVKHLSKERPTLAF------------HASITNSFGKGSLIQLLRQFSQLHKDRHQISVGF 83
WV +L PT+ H S + S +L++ L+ +S K + ++VG
Sbjct: 215 WVTYLRNFFPTIPMRSASGSGNSNLKHQSASASSTISNLLKSLKSYSAKKKLKSSLTVGV 274
Query: 84 IGYPNTGKSSIINTLRKKKV------CQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPS 137
IGYPN GKSS+IN L + C + G T + + L ++ L+D PGIV PS
Sbjct: 275 IGYPNVGKSSVINALVNRSANGRSAPCPAGNVAGMTTSLREVKLDNKLRLVDSPGIVFPS 334
Query: 138 SKDSEED---ILFRGVVRVEHVSHPE----------QYIPGILKRC-KRQHLERTYEISG 183
S DS++D ++ V V P +PG L+R +R L S
Sbjct: 335 S-DSKDDLYRLVMLNAVSSTKVDDPVAVASYILQFLSRVPGQLERMFQRYELPPLLNTSD 393
Query: 184 WKDSVDFIEMIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWF 228
+ DF+ IARK+GRL +GG P+ + + ++ND++ G+I W+
Sbjct: 394 IDTATDFLVNIARKRGRLGRGGIPNLNAAANIVINDWHAGRIEWW 438
>At2g27200 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 537
Score = 93.2 bits (230), Expect = 4e-19
Identities = 53/162 (32%), Positives = 85/162 (51%), Gaps = 11/162 (6%)
Query: 78 QISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPS 137
Q+ VGF+GYPN GKSS IN L +K V PG+TK +Q + + + + L DCPG+V PS
Sbjct: 304 QVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISEDLMLCDCPGLVFPS 363
Query: 138 SKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISGWKD----------- 186
S +++ GV+ ++ ++ + I + + R +E Y IS K
Sbjct: 364 FSSSRYEMVASGVLPIDRMTEHLEAIKVVAELVPRHAIEDVYNISLPKPKSYEPQSRPPL 423
Query: 187 SVDFIEMIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWF 228
+ + + +G + G PDE+ ++QIL D+ GK+P F
Sbjct: 424 ASELLRTYCLSRGYVASSGLPDETRAARQILKDYIEGKLPHF 465
>At1g08410 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 589
Score = 92.8 bits (229), Expect = 5e-19
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 76 RHQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVP 135
R Q VGF+GYPN GKSS IN L +K V PG+TK +Q + + + L DCPG+V
Sbjct: 306 RDQAVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVF 365
Query: 136 PSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISGWK---------- 185
PS S +++ GV+ ++ ++ + I + + R+ +E Y IS K
Sbjct: 366 PSFSSSRYEMIASGVLPIDRMTEHREAIQVVADKVPRRVIESVYNISLPKPKTYERQSRP 425
Query: 186 -DSVDFIEMIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWF 228
+ + ++ +G + G PDE+ ++ IL D+ GK+P +
Sbjct: 426 PHAAELLKSYCASRGYVASSGLPDETKAARLILKDYIGGKLPHY 469
>7290165 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 606
Score = 87.8 bits (216), Expect = 2e-17
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 43 ERPTLAFHASITNSFGKGSLIQLLRQF--SQLHKDRHQISVGFIGYPNTGKSSIINTLRK 100
E P L + + LI+ LR H ++H ++VG +GYPN GKSS IN+L
Sbjct: 301 ELPRLPGDKNSPRLLSRLELIEFLRNIYTGPRHTEQH-VTVGMVGYPNVGKSSTINSLMT 359
Query: 101 KKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVSHPE 160
K V+ PG+TK +Q + L K I L DCPG+V PS ++ D+L G++ ++ +
Sbjct: 360 VKKVSVSATPGKTKRFQTLFLDKDILLCDCPGLVMPSFVLTKADMLLNGILPIDQMRDHV 419
Query: 161 QYIPGILKRCKRQHLERTYEISGWK-----------DSVDFIEMIARKQGRLLKGGEPDE 209
+ + +R R LE Y I K S + + +G + G+PD+
Sbjct: 420 PAVNLLCERIPRHVLEDKYGIVIAKPLEGEDMERPPHSEELLLAYGYNRGFMTSNGQPDQ 479
Query: 210 SGVSKQILNDFNRGKI 225
+ ++ +L D+ G++
Sbjct: 480 ARSARYVLKDYVNGRL 495
>Hs14149720 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 658
Score = 84.3 bits (207), Expect = 2e-16
Identities = 52/177 (29%), Positives = 87/177 (48%), Gaps = 15/177 (8%)
Query: 64 QLLRQFSQLHKDRH----QISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYI 119
+LL F +LH R Q++VG +GYPN GKSS INT+ K V+ PG TK +Q +
Sbjct: 368 ELLELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTL 427
Query: 120 TLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTY 179
+ + L DCPG+V PS ++ ++ G++ ++ + + + + R LE TY
Sbjct: 428 YVEPGLCLCDCPGLVMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATY 487
Query: 180 EIS-----------GWKDSVDFIEMIARKQGRLLKGGEPDESGVSKQILNDFNRGKI 225
I+ S + + +G + G+PD+ ++ IL D+ GK+
Sbjct: 488 GINIITPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKL 544
>SPAC3F10.16c [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 616
Score = 83.2 bits (204), Expect = 4e-16
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 12/168 (7%)
Query: 70 SQLHKDRHQISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLID 129
S L + +++ G +GYPN GKSS IN L K V+ PG+TK +Q I L +++ L+D
Sbjct: 293 STLPDGKTKMTFGLVGYPNVGKSSTINALVGSKKVSVSSTPGKTKHFQTINLSEKVSLLD 352
Query: 130 CPGIVPPSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEI-------- 181
CPG+V PS ++ D++ GV+ ++ + + +R ++ LE Y I
Sbjct: 353 CPGLVFPSFATTQADLVLDGVLPIDQLREYTGPSALMAERIPKEVLETLYTIRIRIKPIE 412
Query: 182 ---SGWKDSVDFIEMIARKQGRL-LKGGEPDESGVSKQILNDFNRGKI 225
+G + + + AR +G + G PD+S ++ +L D+ GK+
Sbjct: 413 EGGTGVPSAQEVLFPFARSRGFMRAHHGTPDDSRAARILLKDYVNGKL 460
>YER006w [R] KOG2484 GTPase
Length = 520
Score = 82.4 bits (202), Expect = 6e-16
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 34/224 (15%)
Query: 36 WVKHLSKERPTLAFHAS------------ITNSFGKGSLIQLLRQFSQLHKDRHQISVGF 83
W+ +L PT+ AS ++ + +L++ L+ +S + I VG
Sbjct: 226 WLNYLKSSFPTIPLRASSGAVNGTSFNRKLSQTTTASALLESLKTYSNNSNLKRSIVVGV 285
Query: 84 IGYPNTGKSSIINTL-----RKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSS 138
IGYPN GKSS+IN L + K C V G T + I + ++ ++D PGI PS
Sbjct: 286 IGYPNVGKSSVINALLARRGGQSKACPVGNEAGVTTSLREIKIDNKLKILDSPGICFPSE 345
Query: 139 K------DSEEDILFRGVVRVEHVSHPEQYIPGILKRCKR-----QHLERTYEI------ 181
+ E ++ + +H+ P + ++KR + + ++ YEI
Sbjct: 346 NKKRSKVEHEAELALLNALPAKHIVDPYPAVLMLVKRLAKSDEMTESFKKLYEIPPIPAN 405
Query: 182 SGWKDSVDFIEMIARKQGRLLKGGEPDESGVSKQILNDFNRGKI 225
+ F+ +ARK+GRL KGG P+ + +LND+ GKI
Sbjct: 406 DADTFTKHFLIHVARKRGRLGKGGIPNLASAGLSVLNDWRDGKI 449
>CE26362 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 506
Score = 81.6 bits (200), Expect = 1e-15
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 45 PTLAFHASITNSFGKGSLIQLLRQFSQLHKD--RHQISVGFIGYPNTGKSSIINTLRKKK 102
P+ + H +TN K LI ++ + + + VG +GYPN GKSS IN L K
Sbjct: 218 PSTSTHMFVTN---KDELIAKFKELGHVSDEPSAKPVMVGMVGYPNVGKSSTINKLAGGK 274
Query: 103 VCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVSHPEQY 162
V+ PG+T+ +Q I + ++ L DCPG+V PS ++ G++ V+ +
Sbjct: 275 KVSVSATPGKTRHFQTIHIDSQLCLCDCPGLVMPSFSFGRSEMFLNGILPVDQMRDHFGP 334
Query: 163 IPGILKRCKRQHLERTYEI----SGWKDSVDFIEMIARKQGRLLKGGEPDESGVSKQILN 218
+L R +E TY I +++ + +A +G + G PD S ++ +
Sbjct: 335 TSLLLSRVPVHVIEATYSIMLPEMQSPSAINLLNSLAFMRGFMASSGIPDCSRAARLMFK 394
Query: 219 DFNRGKIPW 227
D GK+ W
Sbjct: 395 DVVSGKLIW 403
>YGL099w [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 640
Score = 77.8 bits (190), Expect = 2e-14
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 13/160 (8%)
Query: 79 ISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSS 138
I++G +GYPN GKSS IN+L K V+ PG+TK +Q I L + L DCPG+V P+
Sbjct: 337 INIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKTKHFQTIKLSDSVMLCDCPGLVFPNF 396
Query: 139 KDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISGWKDSVD--------- 189
++ +++ GV+ ++ + + +R + ++E Y I S D
Sbjct: 397 AYNKGELVCNGVLPIDQLRDYIGPAGLVAERIPKYYIEAIYGIHIQTKSRDEGGNGDIPT 456
Query: 190 ---FIEMIARKQGRLLKG-GEPDESGVSKQILNDFNRGKI 225
+ AR +G + +G G DE S+ IL D+ GK+
Sbjct: 457 AQELLVAYARARGYMTQGYGSADEPRASRYILKDYVNGKL 496
>Hs13376500 [R] KOG2484 GTPase
Length = 148
Score = 77.4 bits (189), Expect = 2e-14
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 36 WVKHLSKERPTLAFHASITN--SFGKGSLIQLLRQFSQLHKDRHQISVGFIGYPNTGKSS 93
W+ +L E PT+AF A + SFG +L+++L + L + R I + +G PN GKSS
Sbjct: 31 WLDYLRNELPTVAFKARTQHQVSFGAENLMRVLGNYCCLGEMRTHIHMDIVGLPNIGKSS 90
Query: 94 IINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVP-PSSK 139
+I +L+ C V IPG TK Q + L K I L+D P IVP PSS+
Sbjct: 91 LIKSLKHSHACSVGAIPGVTKFMQEVYLDKFIRLLDAPAIVPGPSSE 137
>7298708 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 575
Score = 69.7 bits (169), Expect = 4e-12
Identities = 50/145 (34%), Positives = 74/145 (50%), Gaps = 10/145 (6%)
Query: 79 ISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSS 138
+++G IG+PN GKSS+IN L+ +KV V+ PG TK +Q I L + L DCPG+V PSS
Sbjct: 333 LTIGCIGFPNVGKSSLINALKGRKVVSVSRTPGHTKHFQTIFLTPLVRLCDCPGLVFPSS 392
Query: 139 KDSEEDILFRGVVRVEHVSHPEQYIPGI-----LKRCKRQHLERTYEISGWKDSVDFIEM 193
+L G + ++ P + + + L + R HL Y+ W +V +
Sbjct: 393 TPKSLQVLL-GSFPISQLAVPYRSLKFLGEHLNLPQLLRLHLPEDYD--EW-SAVAISDA 448
Query: 194 IARKQGRL-LKGGEPDESGVSKQIL 217
A K+G L K PD + IL
Sbjct: 449 WAYKRGFLTAKAARPDRYRAANHIL 473
>ECU08g0240 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 410
Score = 68.9 bits (167), Expect = 7e-12
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 80 SVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSSK 139
+VGF+GYPN GKSS IN++ K +V+ PG+TK Q I + L+DCPG+V P
Sbjct: 245 TVGFVGYPNVGKSSTINSIMNSKRVKVSQTPGKTKHIQTIQVESGPCLLDCPGLVFPG-- 302
Query: 140 DSEEDILFRGVVRVEH---VSHPEQYIP---GILKRCKRQHLERTYEISGWKDSVDFIEM 193
+ ++ G++ V+ ++ YI GI K C+ L Y S ++I +
Sbjct: 303 HDKISLILHGILNVDQLLDLNSSLDYIVEFIGINKLCRFYSLRGFYNDSRQSKGANYINL 362
Query: 194 IARKQGRLLKGGEPDESGVSKQILNDFNRGKI 225
++ +G S K I+ DF GKI
Sbjct: 363 MSTTKGW-------TASRCLKTIVKDFASGKI 387
>At4g02790 [R] KOG2484 GTPase
Length = 375
Score = 65.9 bits (159), Expect = 6e-11
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 79 ISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSS 138
+ G IGYPN GKSS+IN L K+K+C AP PG T+ +++ L K + L+D PG++P
Sbjct: 217 VRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRI 276
Query: 139 KDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISG------WKDSVD--F 190
D I + ++ + GIL Q L R E+ +K ++
Sbjct: 277 DDQAAAIKLAICDDIGEKAYDFTDVAGILV----QMLARIPEVGAKALYNRYKIQLEGNC 332
Query: 191 IEMIARKQGRLLKGGEPDESGVSKQILNDFNRGK 224
+ + G L GG+ ++ +IL DF +GK
Sbjct: 333 GKKFVKTLGLNLFGGDSHQAAF--RILTDFRKGK 364
>SPBC25B2.04c [R] KOG2485 Conserved ATP/GTP binding protein
Length = 328
Score = 63.5 bits (153), Expect = 3e-10
Identities = 67/219 (30%), Positives = 101/219 (45%), Gaps = 28/219 (12%)
Query: 31 SQQAAWVKHLSKERPTLAFHASITNSFGKG-----SLIQLLRQFSQLHKDRHQISVGFIG 85
+QQ V+ KE T A IT K L++L+R ++ V F+G
Sbjct: 93 AQQFQNVECWFKETSTPEKSAFITPYVSKAPYFAKELLRLIRTLVDQASANGRVYVYFVG 152
Query: 86 YPNTGKSSIINT-----LRKKKVCQVAPIPGETK-VWQYITLMK--RIFLIDCPGIVPPS 137
PNTGKSSI+N+ LRK K V PG TK + + + L ++++D PGI+ PS
Sbjct: 153 MPNTGKSSILNSLRNVALRKSKSAIVGNYPGVTKRISEIVRLFNDMDVYMLDTPGIMTPS 212
Query: 138 SKDSEE--DILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYE--ISGW----KDSVD 189
E+ + G V+ E + HP + +L HL R S W D +
Sbjct: 213 ITKPEDMLKLSLVGCVK-EGIVHPVTVVDYLL-----FHLNRIDPSLYSKWSLPTNDVDE 266
Query: 190 FIEMIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWF 228
F++ A K +L KGG DE+ VS ++ + G++ F
Sbjct: 267 FLQNTAYKARKLTKGGF-DENFVSNYVIQQYRIGRLGRF 304
>Hs4885289 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 430
Score = 60.8 bits (146), Expect = 2e-09
Identities = 32/97 (32%), Positives = 52/97 (52%), Gaps = 1/97 (1%)
Query: 79 ISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSS 138
+++G +G+PN GKSS+IN L +KV V+ PG T+ +Q L + L DCPG++ PS
Sbjct: 184 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL 243
Query: 139 KDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHL 175
+ +L G+ + + P + + R Q L
Sbjct: 244 LPRQLQVL-AGIYPIAQIQEPYTAVGYLASRIPVQAL 279
>Hs20555662 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 607
Score = 60.8 bits (146), Expect = 2e-09
Identities = 32/97 (32%), Positives = 52/97 (52%), Gaps = 1/97 (1%)
Query: 79 ISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLMKRIFLIDCPGIVPPSS 138
+++G +G+PN GKSS+IN L +KV V+ PG T+ +Q L + L DCPG++ PS
Sbjct: 361 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL 420
Query: 139 KDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHL 175
+ +L G+ + + P + + R Q L
Sbjct: 421 LPRQLQVL-AGIYPIAQIQEPYTAVGYLASRIPVQAL 456
>7300920 [R] KOG2485 Conserved ATP/GTP binding protein
Length = 297
Score = 49.3 bits (116), Expect = 6e-06
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 23/131 (17%)
Query: 32 QQAAWVKHLSKERPTLAFHASITNSFGKGS------------LIQLLRQFSQLHKDRHQI 79
QQ + ++ L +++P L H TN + + L+ +F++ H +
Sbjct: 61 QQKSVLQQLRRQQPELQ-HILFTNCKDQRNNGVLDILPLATRLVSESSRFNRTQAAEHNL 119
Query: 80 SVGFIGYPNTGKSSIINTLR-----KKKVCQVAPIPGETK-VWQYITLMKR--IFLIDCP 131
+ IG PN GKSS+IN LR KK +V G T+ V + I + + +++ID P
Sbjct: 120 MI--IGVPNVGKSSVINVLRNVHLKKKSAARVGAEAGITRSVGERIKIQENPPVYMIDTP 177
Query: 132 GIVPPSSKDSE 142
GI+ PS KD E
Sbjct: 178 GILQPSIKDDE 188
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,727,622
Number of Sequences: 60738
Number of extensions: 656504
Number of successful extensions: 1542
Number of sequences better than 1.0e-05: 30
Number of HSP's better than 0.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1489
Number of HSP's gapped (non-prelim): 30
length of query: 277
length of database: 30,389,216
effective HSP length: 105
effective length of query: 172
effective length of database: 24,011,726
effective search space: 4130016872
effective search space used: 4130016872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)