ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII4722 good R KOG2423 General function prediction only Nucleolar GTPase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIII4722 1673466 1672639 -276
(276 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YNR053c [R] KOG2423 Nucleolar GTPase 410 e-114
SPAC6F6.03c [R] KOG2423 Nucleolar GTPase 295 4e-80
Hs7019419 [R] KOG2423 Nucleolar GTPase 212 5e-55
CE20083 [R] KOG2423 Nucleolar GTPase 207 1e-53
CE20084 [R] KOG2423 Nucleolar GTPase 205 6e-53
At1g52980 [R] KOG2423 Nucleolar GTPase 201 9e-52
7302756 [R] KOG2423 Nucleolar GTPase 190 2e-48
ECU09g1650 [R] KOG2423 Nucleolar GTPase 166 3e-41
7300220 [R] KOG2484 GTPase 71 1e-12
At3g07050 [R] KOG2484 GTPase 68 1e-11
Hs7657048 [R] KOG2484 GTPase 67 3e-11
Hs9506611 [R] KOG2484 GTPase 60 3e-09
At1g08410 [R] KOG1424 Predicted GTP-binding protein MMR1 59 1e-08
SPBC26H8.08c [R] KOG2484 GTPase 58 1e-08
At2g27200 [R] KOG1424 Predicted GTP-binding protein MMR1 58 1e-08
CE26362 [R] KOG1424 Predicted GTP-binding protein MMR1 56 5e-08
YER006w [R] KOG2484 GTPase 55 1e-07
CE02270 [R] KOG2484 GTPase 54 2e-07
Hs14149720 [R] KOG1424 Predicted GTP-binding protein MMR1 53 4e-07
>YNR053c [R] KOG2423 Nucleolar GTPase
Length = 486
Score = 410 bits (1054), Expect = e-114
Identities = 200/273 (73%), Positives = 224/273 (81%), Gaps = 1/273 (0%)
Query: 1 MGTGKKEKQRRIREGNTKDGNLRVKGENFYRDTKRVQFLNMYKGGRSVRNAKGDIIKAAP 60
MGTGKKEK RRIREG+TKDGNLRVKGENFYRD+KRV+FLNMY G+ +RN KG++I+AA
Sbjct: 1 MGTGKKEKSRRIREGDTKDGNLRVKGENFYRDSKRVKFLNMYTSGKEIRNKKGNLIRAAS 60
Query: 61 LQDTAAPTARVAPDRRWFGNTRVISQDSLSHFREALGENKRDSYQVLLRRNKLPMSLLNE 120
QD+ P ARV PDRRWFGNTRVISQD+L HFR ALGE ++D+YQVLLRRNKLPMSLL E
Sbjct: 61 FQDSTIPDARVQPDRRWFGNTRVISQDALQHFRSALGETQKDTYQVLLRRNKLPMSLLEE 120
Query: 121 KDSAESPTAKILETEPFEQTFGPKAQRKKPRXXXXXXXXXXXXXXXDNKTFEEKQELDST 180
KD+ ESP A+IL+TE + FGPKAQRK+PR D +EEKQ LD+T
Sbjct: 121 KDADESPKARILDTESYADAFGPKAQRKRPRLAASNLEDLVKATNEDITKYEEKQVLDAT 180
Query: 181 LGLMGKQEE-EDGWTQAAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCK 239
LGLMG QE+ E+GWT AAKEAIF KGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCK
Sbjct: 181 LGLMGNQEDKENGWTSAAKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCK 240
Query: 240 SVTDYMTNETPHKHLIYVLNKCDLVPTWVAVCF 272
SV +YM ETPHKHLIYVLNKCDLVPTWVA +
Sbjct: 241 SVEEYMKKETPHKHLIYVLNKCDLVPTWVAAAW 273
>SPAC6F6.03c [R] KOG2423 Nucleolar GTPase
Length = 537
Score = 295 bits (756), Expect = 4e-80
Identities = 154/274 (56%), Positives = 189/274 (68%), Gaps = 8/274 (2%)
Query: 1 MGTGKKEKQRRIREG--NTKDGNLRVKGENFYRDTKRVQFLNMYKGGRSVRNAKGDIIKA 58
MGT KKEK R REG K GNLRVKGENFYR+ K V +NMY+GG++ NA G++++A
Sbjct: 1 MGTYKKEKSRIGREGANEKKPGNLRVKGENFYRNAKDVARVNMYRGGKAKYNAAGELVRA 60
Query: 59 APLQDTAAPTARVAPDRRWFGNTRVISQDSLSHFREALGENKRDSYQVLLRRNKLPMSLL 118
A Q + P AR+ PDRRWF NTRVI+Q +L+ FREA+G+ D YQVLLRRNKLPMSLL
Sbjct: 61 AEFQSSEVPKARIQPDRRWFNNTRVIAQPTLTQFREAMGQKLNDPYQVLLRRNKLPMSLL 120
Query: 119 NEKDSAESPTAKILETEPFEQTFGPKAQRKKPRXXXXXXXXXXXXXXXDNKTFEEKQELD 178
E + E P ++LE+EPFE TFGPK+QRK+P+ +EEK E
Sbjct: 121 QE--NTEIPKVRVLESEPFENTFGPKSQRKRPKISFDSVAELAKESDEKQNAYEEKIE-- 176
Query: 179 STLGLMGKQEEEDGWTQAAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRC 238
++ +E D AA++AIF KGQSKRIWNELYKVIDSSDV+I VLDARDP+GTRC
Sbjct: 177 --ERILANPDESDDVMLAARDAIFSKGQSKRIWNELYKVIDSSDVLIQVLDARDPVGTRC 234
Query: 239 KSVTDYMTNETPHKHLIYVLNKCDLVPTWVAVCF 272
+V Y+ NE HKH+I VLNK DLVPT VA +
Sbjct: 235 GTVERYLRNEASHKHMILVLNKVDLVPTSVAAAW 268
>Hs7019419 [R] KOG2423 Nucleolar GTPase
Length = 731
Score = 212 bits (539), Expect = 5e-55
Identities = 113/256 (44%), Positives = 156/256 (60%), Gaps = 10/256 (3%)
Query: 14 EGNTKDGNLRVKGENFYRDTKRVQFLNMYKGGRSVRNAKGDIIKAAPLQDTAAP--TARV 71
+ +T ++ G RD ++ LNMY+ + RN++G IIK Q T A ARV
Sbjct: 16 KASTNPDRVQGAGGQNMRDRATIRRLNMYRQ-KERRNSRGKIIKPLQYQSTVASGTVARV 74
Query: 72 APDRRWFGNTRVISQDSLSHFREALGENKRDSYQVLLRRNKLPMSLLNEKDSAESPTAKI 131
P+ +WFGNTRVI Q SL F+E + +D Y+V+++++KLPMSLL+++ + I
Sbjct: 75 EPNIKWFGNTRVIKQSSLQKFQEEMDTVMKDPYKVVMKQSKLPMSLLHDRIRPHNLKVHI 134
Query: 132 LETEPFEQTFGPKAQRKKPRXXXXXXXXXXXXXXXDNKTFEEKQELDSTLGLMGKQEEED 191
L+TE FE TFGPK+QRK+P +++++ ++ D E+
Sbjct: 135 LDTESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVT-------EDT 187
Query: 192 GWTQAAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPH 251
G A+E I+ KGQSKRIW ELYKVIDSSDVV+ VLDARDP+GTR + Y+ E P
Sbjct: 188 GVRNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPW 247
Query: 252 KHLIYVLNKCDLVPTW 267
KHLI+VLNKCDLVPTW
Sbjct: 248 KHLIFVLNKCDLVPTW 263
>CE20083 [R] KOG2423 Nucleolar GTPase
Length = 698
Score = 207 bits (527), Expect = 1e-53
Identities = 109/240 (45%), Positives = 151/240 (62%), Gaps = 12/240 (5%)
Query: 31 RDTKRVQFLNMYKGGRSVRNAKGDIIKAAPLQDTAAP--TARVAPDRRWFGNTRVISQDS 88
R + L MYK + +R++KG I+KAAP QDT A AR+ P+R+WFGNTR+I Q+
Sbjct: 50 RSKATINRLRMYKSFKPIRDSKGKILKAAPFQDTLASGTQARIEPNRKWFGNTRIIGQEQ 109
Query: 89 LSHFREALGENKRDSYQVLLRRNKLPMSLLNEKDSAESPTAKILETEPFEQTFGPKAQRK 148
L F+ LG+ D +QV++++ KLP+SLL EK A++ + ETE FE TFG K+ RK
Sbjct: 110 LQKFQANLGKVLSDPFQVVMKQTKLPISLLQEK--AKTQRVHVTETESFEYTFGKKSLRK 167
Query: 149 KPRXXXXXXXXXXXXXXXDNKTFEEKQELDSTLGLMGKQEEEDGWTQAAKEAIFHKGQSK 208
K + +++ + K ELD + +E+E G +F GQS
Sbjct: 168 KAKLTEASLEEMSKSA--EDRDVKYKPELDLS------REKELGDRPENMNPLFRAGQSN 219
Query: 209 RIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLVPTWV 268
R+W ELYKVIDSSDVV+ V+DARDP+GTRC+ V +++ E PHKHL+ V+NK DLVPTWV
Sbjct: 220 RVWGELYKVIDSSDVVVQVVDARDPMGTRCRHVEEFLRKEKPHKHLVTVINKVDLVPTWV 279
>CE20084 [R] KOG2423 Nucleolar GTPase
Length = 639
Score = 205 bits (521), Expect = 6e-53
Identities = 107/230 (46%), Positives = 148/230 (63%), Gaps = 12/230 (5%)
Query: 41 MYKGGRSVRNAKGDIIKAAPLQDTAAP--TARVAPDRRWFGNTRVISQDSLSHFREALGE 98
MYK + +R++KG I+KAAP QDT A AR+ P+R+WFGNTR+I Q+ L F+ LG+
Sbjct: 1 MYKSFKPIRDSKGKILKAAPFQDTLASGTQARIEPNRKWFGNTRIIGQEQLQKFQANLGK 60
Query: 99 NKRDSYQVLLRRNKLPMSLLNEKDSAESPTAKILETEPFEQTFGPKAQRKKPRXXXXXXX 158
D +QV++++ KLP+SLL EK A++ + ETE FE TFG K+ RKK +
Sbjct: 61 VLSDPFQVVMKQTKLPISLLQEK--AKTQRVHVTETESFEYTFGKKSLRKKAKLTEASLE 118
Query: 159 XXXXXXXXDNKTFEEKQELDSTLGLMGKQEEEDGWTQAAKEAIFHKGQSKRIWNELYKVI 218
+++ + K ELD + +E+E G +F GQS R+W ELYKVI
Sbjct: 119 EMSKSA--EDRDVKYKPELDLS------REKELGDRPENMNPLFRAGQSNRVWGELYKVI 170
Query: 219 DSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLVPTWV 268
DSSDVV+ V+DARDP+GTRC+ V +++ E PHKHL+ V+NK DLVPTWV
Sbjct: 171 DSSDVVVQVVDARDPMGTRCRHVEEFLRKEKPHKHLVTVINKVDLVPTWV 220
>At1g52980 [R] KOG2423 Nucleolar GTPase
Length = 576
Score = 201 bits (511), Expect = 9e-52
Identities = 116/271 (42%), Positives = 149/271 (54%), Gaps = 19/271 (7%)
Query: 5 KKEKQRRIR-------EGNTKDGNLRVKGENFYRDTKRVQFLNMYKGGRSVRNAKGDIIK 57
KKEK+ + + N DG K R V L MYK R RNA G I+
Sbjct: 3 KKEKKANVSGKPKHSLDANRADGK---KKTTETRSKSTVNRLKMYKT-RPKRNAGGKIL- 57
Query: 58 AAPLQDTAAPTARVAPDRRWFGNTRVISQDSLSHFREALGENKRDSYQVLLRRNKLPMSL 117
+ Q P +R+APDRRWFGNTRV++Q L +FRE L +Y V+L+ KLPMSL
Sbjct: 58 SNEYQSKELPNSRIAPDRRWFGNTRVVNQKELEYFREELQTKMSSNYNVILKERKLPMSL 117
Query: 118 LNEKDSAESPTAKILETEPFEQTFGPKAQRKKPRXXXXXXXXXXXXXXXDNKTFEEKQEL 177
L D+ + +L+ EPF+ FG K +RK+P+ FEEK
Sbjct: 118 LT--DNKKQSRVHLLDMEPFQDAFGRKTKRKRPKLVASDYEALVKKAAESQDAFEEK--- 172
Query: 178 DSTLGLMGKQ-EEEDGWTQAAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGT 236
+ G G+ EEEDG+ + +F KGQSKRIW ELYKVIDSSDV++ V+DARDP GT
Sbjct: 173 -NGAGPSGEGGEEEDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVIVQVIDARDPQGT 231
Query: 237 RCKSVTDYMTNETPHKHLIYVLNKCDLVPTW 267
RC + + HKH+I +LNKCDLVP W
Sbjct: 232 RCHHLEKTLKEHHKHKHMILLLNKCDLVPAW 262
>7302756 [R] KOG2423 Nucleolar GTPase
Length = 674
Score = 190 bits (482), Expect = 2e-48
Identities = 99/247 (40%), Positives = 149/247 (60%), Gaps = 11/247 (4%)
Query: 24 VKGENFYRDTKRVQFLNMYKGGRSVRNAKGDIIKAAPLQDT--AAPTARVAPDRRWFGNT 81
+KG R ++ L MY+ ++ R+ G I+ AP Q A ARV P +WF N+
Sbjct: 32 LKGVAHPRTKGTIKRLQMYRNFKAKRDRTGKILTPAPFQGRLPAGTMARVEPTPKWFSNS 91
Query: 82 RVISQDSLSHFREALGENKRDSYQVLLRRNKLPMSLLNEKDSAESPTAKILETEPFEQTF 141
RVISQ +L F++ +G+ +D YQV+++ ++LP++LLNE +A+ +L+TE F+ TF
Sbjct: 92 RVISQTALQKFQDEIGKAVKDPYQVIMKPSQLPVTLLNE--AAKYKRVHLLDTESFDSTF 149
Query: 142 GPKAQRKKPRXXXXXXXXXXXXXXXDNKTFEEKQELDSTLGLMGKQEEEDGWTQAAKEAI 201
GPK QRK+ ++ ++LD E+ G +A ++ +
Sbjct: 150 GPKKQRKRVSLKVRDLEDLSKAADDQADKYDSAKDLDLI-------REDTGEKKAVRDWV 202
Query: 202 FHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKC 261
F GQSKRIWNEL+KV+D+SDV++ VLDARDP+GTR K + +++ E PHKHL ++LNK
Sbjct: 203 FGAGQSKRIWNELHKVVDASDVLLQVLDARDPMGTRSKYIEEFLRKEKPHKHLFFILNKV 262
Query: 262 DLVPTWV 268
DLVP WV
Sbjct: 263 DLVPVWV 269
>ECU09g1650 [R] KOG2423 Nucleolar GTPase
Length = 418
Score = 166 bits (421), Expect = 3e-41
Identities = 94/242 (38%), Positives = 137/242 (55%), Gaps = 34/242 (14%)
Query: 27 ENFYRDTKRVQFLNMYKGGRSVRNAKGDIIKAAPLQDTAAPTARVAPDRRWFGNTRVISQ 86
EN+Y + K++++L M + GR +N++G+I+K AP Q + A R+ P R+WF ++ IS
Sbjct: 10 ENYY-NKKKLKYLEMLRSGRPKKNSRGEIVKDAPFQSSKAEVGRIEPSRKWFTGSKTISP 68
Query: 87 DSLSHFREALGENKRDSYQVLLRRNKLPMSLLNEKDSAESPTAKILETEPFEQTFGPKAQ 146
L FR + Y VLL K+P SLL++ + K + F + FG K+
Sbjct: 69 TELDAFRSEM--KIETPYNVLLSTGKVPYSLLDD-------STKRKRLKDFGEVFGKKSV 119
Query: 147 RKKPRXXXXXXXXXXXXXXXDNKTFEEKQELDSTLGLMGKQEEEDGWTQAAKEAIFHKGQ 206
RK+P N + +EL ++ ++ +A K+ + KGQ
Sbjct: 120 RKRP-----------------NLRYSSLEELSRQA-----RDVKEEKVEAKKDHV--KGQ 155
Query: 207 SKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLVPT 266
S RIW ELYKV+DSSDV+IHVLDARDP+GT C+ + Y+ E PHKHL+YVLNK DL+PT
Sbjct: 156 SHRIWLELYKVLDSSDVIIHVLDARDPMGTMCEKIASYIKEEAPHKHLMYVLNKVDLIPT 215
Query: 267 WV 268
V
Sbjct: 216 GV 217
>7300220 [R] KOG2484 GTPase
Length = 581
Score = 71.2 bits (173), Expect = 1e-12
Identities = 41/101 (40%), Positives = 61/101 (59%), Gaps = 4/101 (3%)
Query: 169 KTFE---EKQELDSTL-GLMGKQEEEDGWTQAAKEAIFHKGQSKRIWNELYKVIDSSDVV 224
KT E E ++ ST+ G+M + + +D + K A+ + K+ + E KVI+++DVV
Sbjct: 95 KTLESMVEDADMRSTVHGIMHENDAQDQDEKKYKNAVTKEQSLKQYFKEFRKVIENADVV 154
Query: 225 IHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLVP 265
+ V+DARDPLGTRC V + +K L+ VLNK DLVP
Sbjct: 155 LEVVDARDPLGTRCNEVERAVRGAPGNKRLVLVLNKADLVP 195
>At3g07050 [R] KOG2484 GTPase
Length = 582
Score = 68.2 bits (165), Expect = 1e-11
Identities = 36/88 (40%), Positives = 50/88 (55%), Gaps = 6/88 (6%)
Query: 184 MGKQEEEDGWTQAA------KEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTR 237
+G ++ED T+ K + + EL KVI+ SDV++ VLDARDPLGTR
Sbjct: 94 LGLVDDEDTKTEGETIEDLPKVVNVRDNSERAFYKELVKVIELSDVILEVLDARDPLGTR 153
Query: 238 CKSVTDYMTNETPHKHLIYVLNKCDLVP 265
C + + P+KHL+ +LNK DLVP
Sbjct: 154 CTDMERMVMQAGPNKHLVLLLNKIDLVP 181
>Hs7657048 [R] KOG2484 GTPase
Length = 560
Score = 67.0 bits (162), Expect = 3e-11
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 6/102 (5%)
Query: 169 KTFEEKQELDSTLGL----MGKQEEEDGWTQAAKEAIFHKGQSKRIW-NELYKVIDSSDV 223
K E+K++L++ + + E+E G + +A K SK+++ EL KVI++SDV
Sbjct: 84 KELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEASDV 143
Query: 224 VIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLVP 265
V+ VLDARDPLG RC V + + ++ K L+ +LNK DLVP
Sbjct: 144 VLEVLDARDPLGCRCPQVEEAIV-QSGQKKLVLILNKSDLVP 184
>Hs9506611 [R] KOG2484 GTPase
Length = 582
Score = 60.5 bits (145), Expect = 3e-09
Identities = 34/95 (35%), Positives = 50/95 (51%), Gaps = 14/95 (14%)
Query: 171 FEEKQELDSTLGLMGKQEEEDGWTQAAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDA 230
FE K+E+ L + + ++E K + E KV++ SDV++ VLDA
Sbjct: 99 FEHKEEVLQELNMFPQLDDE--------------ATRKAYYKEFRKVVEYSDVILEVLDA 144
Query: 231 RDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLVP 265
RDPLG RC + + + +K L+ VLNK DLVP
Sbjct: 145 RDPLGCRCFQMEEAVLRAQGNKKLVLVLNKIDLVP 179
>At1g08410 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 589
Score = 58.5 bits (140), Expect = 1e-08
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 210 IWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLVPT 266
IW +L++V++ SD+++ V+DARDPL RC + Y HK ++ ++NK DL+PT
Sbjct: 157 IWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKIMLLVNKADLLPT 213
>SPBC26H8.08c [R] KOG2484 GTPase
Length = 470
Score = 58.2 bits (139), Expect = 1e-08
Identities = 29/57 (50%), Positives = 40/57 (69%), Gaps = 1/57 (1%)
Query: 213 ELYKVIDSSDVVIHVLDARDPLGTRCKSV-TDYMTNETPHKHLIYVLNKCDLVPTWV 268
E KV+++SDV+++VLDARDP GTR K V + + K LI+V+NK DLVP+ V
Sbjct: 155 EFKKVVEASDVILYVLDARDPEGTRSKDVERQVLASSAEEKRLIFVINKIDLVPSEV 211
>At2g27200 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 537
Score = 58.2 bits (139), Expect = 1e-08
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 210 IWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLVPTWV 268
IW +L++V++ SD+++ V+DARDPL RC + Y HK + ++NK DL+P++V
Sbjct: 157 IWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKTMLLVNKADLLPSYV 215
>CE26362 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 506
Score = 56.2 bits (134), Expect = 5e-08
Identities = 21/55 (38%), Positives = 39/55 (70%)
Query: 210 IWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLV 264
+W EL++V++ SD+++ ++DAR+PL R K + DY+ P K ++ ++NK DL+
Sbjct: 122 MWRELWRVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVNKADLL 176
>YER006w [R] KOG2484 GTPase
Length = 520
Score = 55.1 bits (131), Expect = 1e-07
Identities = 28/64 (43%), Positives = 47/64 (72%), Gaps = 2/64 (3%)
Query: 206 QSKRIWNELYK-VIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLV 264
+S++ +++++K VID+SDV+++VLDARDP TR + V + + ++ K LI +LNK DL+
Sbjct: 160 KSRKAYDKIFKSVIDASDVILYVLDARDPESTRSRKVEEAVL-QSQGKRLILILNKVDLI 218
Query: 265 PTWV 268
P V
Sbjct: 219 PPHV 222
>CE02270 [R] KOG2484 GTPase
Length = 556
Score = 54.3 bits (129), Expect = 2e-07
Identities = 28/54 (51%), Positives = 38/54 (69%), Gaps = 2/54 (3%)
Query: 212 NELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLIYVLNKCDLVP 265
+E+ K ++ +DV+I VLDARDPLG+R KSV D + K L+ +LNK DLVP
Sbjct: 139 SEVRKTVEIADVIIQVLDARDPLGSRSKSVEDQVLK--GGKRLVLLLNKIDLVP 190
>Hs14149720 [R] KOG1424 Predicted GTP-binding protein MMR1
Length = 658
Score = 53.1 bits (126), Expect = 4e-07
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Query: 186 KQEEEDGWTQAAKEAIFHKGQSKRI----------WNELYKVIDSSDVVIHVLDARDPLG 235
KQ E+D + + ++ + + + K I W +L++VI+ SD+V+ ++DAR+PL
Sbjct: 129 KQAEKDNFLEWRRQLVRLEEEQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLL 188
Query: 236 TRCKSVTDYMTNETPHKHLIYVLNKCDLV 264
RC+ + Y+ +K + ++NK DL+
Sbjct: 189 FRCEDLECYVKEMDANKENVILINKADLL 217
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,281,561
Number of Sequences: 60738
Number of extensions: 656108
Number of successful extensions: 1627
Number of sequences better than 1.0e-05: 19
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1589
Number of HSP's gapped (non-prelim): 19
length of query: 276
length of database: 30,389,216
effective HSP length: 105
effective length of query: 171
effective length of database: 24,011,726
effective search space: 4106005146
effective search space used: 4106005146
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)