ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIII4734 good R KOG2742 General function prediction only Predicted oxidoreductase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII4734 1675383  1676432 350  
         (350 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YMR315w [R] KOG2742 Predicted oxidoreductase                          394   e-109
SPAC26H5.09c [R] KOG2742 Predicted oxidoreductase                      53   8e-07
At4g09670 [GQ] KOG2741 Dimeric dihydrodiol dehydrogenase               51   2e-06

>YMR315w [R] KOG2742 Predicted oxidoreductase
          Length = 349

 Score =  394 bits (1012), Expect = e-109
 Identities = 194/348 (55%), Positives = 256/348 (72%)

Query: 3   APLNVGIVGTGIFARNKHLPTFQQHSDKFKPVACFNRTKSKADAFAVTAGIEESKVYAXX 62
           +PLNVGIVGTGIFAR++HLP++Q+  DKFK +A FNR K+KA  FA  A I E+KVY   
Sbjct: 2   SPLNVGIVGTGIFARDRHLPSYQEFPDKFKVIAAFNRHKAKALDFAKVADIPENKVYDNL 61

Query: 63  XXXXXXXXXXXXXXXXXXQFNYETAKKSVEAGKPVILEKPIEANLEQAKKLVQLAESTEL 122
                             QFN +  +K+V+AGKPVILEKPI ANL+QAK++V++AEST L
Sbjct: 62  DEILNDPHVDYIDALLPAQFNADIVEKAVKAGKPVILEKPIAANLDQAKEIVKIAESTPL 121

Query: 123 PVAIAENWLHLECVPIMKEKLAKIGPIAAFTYNSTGPFYPSSEYLATSWRKHPEHIGGFL 182
           PV +AENWL+L C+ I KE++ KIGP+ AFT+NSTGPF   ++YL T+WR+ PEHIGGFL
Sbjct: 122 PVGVAENWLYLPCIKIAKEQIEKIGPVVAFTHNSTGPFVTQNKYLTTTWRQKPEHIGGFL 181

Query: 183 SDGGVHQLALLTTLLGDIGSIAAFSNQLRKESGTNDIVFSSVKLRDSDVIGTFTYGSAFG 242
           SDGGVHQLAL+ +LLG+ GS++A + Q+R+ SG +DIVF++V+L++ +VIG+FTYGSAFG
Sbjct: 182 SDGGVHQLALVISLLGEFGSVSALTRQVRERSGADDIVFATVQLKNKEVIGSFTYGSAFG 241

Query: 243 ATEKSVFLKVYGLNGSVTMNINARTCTTIKTMIGSTGXXXXXXXXXXXXXQPFFGVEAEF 302
           ATEKSVFLKVYG NG+VT++++ +    +K  +G +                 FGV AEF
Sbjct: 242 ATEKSVFLKVYGKNGTVTVDLSDKKDPVVKVKLGGSAEDNGDEQIFKVDNDESFGVNAEF 301

Query: 303 ENFYEAVSKKDKSIVKGSPRVAFHHLAIVAAFLESAAKEGTAIVVQQP 350
            NF+EAVSKKDKS+  G+PR AFHHLA V AFL+S+AK G  + ++QP
Sbjct: 302 LNFHEAVSKKDKSLYLGTPRTAFHHLACVDAFLKSSAKNGDYVKIEQP 349


>SPAC26H5.09c [R] KOG2742 Predicted oxidoreductase
          Length = 369

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 7/205 (3%)

Query: 3   APLNVGIVGTGIFARNKHLPTFQQHSDKFKPVACFNRTKSKADAFAVTAGIEESKVYAXX 62
           AP+   ++GTG+ A   H P  +   + F+  A + R  +  ++ A  A     KVY   
Sbjct: 2   APIKTAVLGTGMSAFIFHYPFLKALPNHFEVYAAWERRATSTESKA-RAAFPNVKVYTKL 60

Query: 63  XXXXXXXXXXXXXXXXXXQFNYETAKKSVEAGKPVILEKPIEANLEQAKKLVQLAESTEL 122
                               +YE   +++ AGK V+ EKP      +AK+L  LA+S  L
Sbjct: 61  DELLADSNIELVVISLPPNVHYEVVSQALNAGKHVLCEKPFTPTYGEAKELFDLAKSKNL 120

Query: 123 PVAIAENWLHLECVPIMKEKL--AKIGPIAAFTYNSTGPFYPSSEYLATSWRKHPEHIGG 180
            + + +N          KE +   ++G +  F  +          +   +W+  P    G
Sbjct: 121 MLTVYQNRRFDGDFLTAKECIENGRLGEVVQFESH----IDRFRLFRKGNWKDVPNPGCG 176

Query: 181 FLSDGGVHQLALLTTLLGDIGSIAA 205
            + D G H +    TL G   S+ A
Sbjct: 177 LVYDLGSHLIDQAITLFGTPHSVTA 201


>At4g09670 [GQ] KOG2741 Dimeric dihydrodiol dehydrogenase
          Length = 362

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 54/220 (24%), Positives = 89/220 (39%), Gaps = 15/220 (6%)

Query: 5   LNVGIVGTGIFARNKHLPTFQQHSDKFKPVACFNRTKSKADAFAVTAGIEES-KVYAXXX 63
           + +G++G    AR          +     VA  +R+  KA AFA      ES K++    
Sbjct: 7   IRIGVMGCADIARKVSRAIHLAPNATISGVA--SRSLEKAKAFATANNYPESTKIHGSYE 64

Query: 64  XXXXXXXXXXXXXXXXXQFNYETAKKSVEAGKPVILEKPIEANLEQAKKLVQLAESTELP 123
                              + E A K+ E GK ++LEKP+  N+ +  K+V   E+  + 
Sbjct: 65  SLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124

Query: 124 VAIAENWLHLECVPIMKEKLA---KIGPIAAFTYNSTGPFYPSSEYLATSWRKHPEHIG- 179
           +     W+H     ++KE L+   + G +   T  S   F    ++L    R  P   G 
Sbjct: 125 IMDGTMWVHNPRTALLKEFLSDSERFGQLK--TVQSCFSFAGDEDFLKNDIRVKPGLDGL 182

Query: 180 GFLSDGGVHQLALLTTLLGD----IGSIAAFSNQLRKESG 215
           G L D G +  A+  TLL +      ++ AF   +  E+G
Sbjct: 183 GALGDAGWY--AIRATLLANNFELPKTVTAFPGAVLNEAG 220


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.317    0.132    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,561,427
Number of Sequences: 60738
Number of extensions: 653321
Number of successful extensions: 1567
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1562
Number of HSP's gapped (non-prelim): 3
length of query: 350
length of database: 30,389,216
effective HSP length: 107
effective length of query: 243
effective length of database: 23,890,250
effective search space: 5805330750
effective search space used: 5805330750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)