ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIII4944  suspect: LH   G     KOG1203  Carbohydrate transport and metabolism                          Predicted dehydrogenase

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIII4944 1750548  1751546 333  
         (333 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g18660 [G] KOG1203 Predicted dehydrogenase                          55   1e-07

>At5g18660 [G] KOG1203 Predicted dehydrogenase
          Length = 417

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 62/262 (23%), Positives = 109/262 (40%), Gaps = 32/262 (12%)

Query: 3   SISNASKKAI--LVVGATSTIGSGVAKSLSKLGASTTVLVRXXX--------XXXXXXXX 52
           S  N S K I  LVVG+T  IG  V K + K G +   + R                   
Sbjct: 75  SFRNKSPKDINVLVVGSTGYIGRFVVKEMIKRGFNVIAVAREKSGIRGKNDKEETLKQLQ 134

Query: 53  XINVAVGDLAKPETLGKAFK--GIDTAFILTPPSELAPGL----------FSNALWAAKQ 100
             NV   D+ + + L K+ +  G     +++  +    G+            N+L A K+
Sbjct: 135 GANVCFSDVTELDVLEKSIENLGFGVDVVVSCLASRNGGIKDSWKIDYEATKNSLVAGKK 194

Query: 101 AGVKHIVRISAV-----KAAHDAPTINSRSHALSDSELITSGIKYTIIKPHFFMQNLLMA 155
            G KH V +SA+             +   +  +  +E   S   Y+I++P  F ++L   
Sbjct: 195 FGAKHFVLLSAICVQKPLLEFQRAKLKFEAELMDLAEQQDSSFTYSIVRPTAFFKSLGGQ 254

Query: 156 TESVKSEGKIYLPFGEG---ALGMIDSRDIVDFSVKTITDAGHDNKVYTITGP-ESINLK 211
            E VK +GK Y+ FG+G   A   I  +D+  F    + +    N+V  I GP +++   
Sbjct: 255 VEIVK-DGKPYVMFGDGKLCACKPISEQDLAAFIADCVLEENKINQVLPIGGPGKALTPL 313

Query: 212 QVAASLSKVINKPVEYVAVALD 233
           +    L K++ +  +++ V ++
Sbjct: 314 EQGEILFKILGREPKFLKVPIE 335


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.316    0.132    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,228,906
Number of Sequences: 60738
Number of extensions: 550235
Number of successful extensions: 1468
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1467
Number of HSP's gapped (non-prelim): 1
length of query: 333
length of database: 30,389,216
effective HSP length: 107
effective length of query: 226
effective length of database: 23,890,250
effective search space: 5399196500
effective search space used: 5399196500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)