ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV0166 suspect: Pn E KOG1939 Amino acid transport and metabolism Oxoprolinase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV0166 51518 54523 1002
(1002 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YKL215c [E] KOG1939 Oxoprolinase 62 6e-09
SPAC11D3.15 [E] KOG1939 Oxoprolinase 62 6e-09
7291425 [E] KOG1939 Oxoprolinase 57 2e-07
>YKL215c [E] KOG1939 Oxoprolinase
Length = 1286
Score = 61.6 bits (148), Expect = 6e-09
Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 10/250 (4%)
Query: 140 IKPLDEDGLRKECANIKTLGITAVAVVATFANINNDHELRATKIIKEALPNVDVVMSHTI 199
IK DE +R + GI ++A+ + DHE I +E + + S
Sbjct: 175 IKKPDESSVRSILKVLYASGIKSIAIAFLHSYTFPDHERIVGNIAREIGFSHVSLSSEVS 234
Query: 200 SGLGFIERENASILNASIKKFGRKIIKSFIHATKEIGLNCTVLLSQNDGTVLSTKDALET 259
+ F+ R ++S+ +A + +K + S I A + + Q+DG ++ +
Sbjct: 235 PMIKFLPRAHSSVADAYLTPVIKKYLNS-ISAGLSHAEDTHIQFMQSDGGLVD--GGKFS 291
Query: 260 PIRTFSSGATNSMRGAAILCSDDPDVKNKSVIVCDIGGTTSDVGQLLPSGFPRQSSTFSY 319
+++ SG + G + C D + N +I D+GGT++DV + G R F
Sbjct: 292 GLKSILSGPAGGVIGYSSTCYDKNN--NIPLIGFDMGGTSTDVSRY---GDGRLEHVFET 346
Query: 320 V-GGVKMNFSMPHVESVGLGGGSIVRDQDGKLTAGPDSTGADIIKEAILFGGDI-VTTSD 377
V G+ + + +V GG SI+ ++G GPDS AD A GG + +T ++
Sbjct: 347 VTAGIIIQSPQLDIHTVAAGGSSILSWKNGLFRVGPDSAAADPGPAAYRKGGPLTITDAN 406
Query: 378 VNIGKRVDEF 387
+ +G+ V EF
Sbjct: 407 LFLGRLVPEF 416
>SPAC11D3.15 [E] KOG1939 Oxoprolinase
Length = 1317
Score = 61.6 bits (148), Expect = 6e-09
Identities = 96/410 (23%), Positives = 168/410 (40%), Gaps = 51/410 (12%)
Query: 140 IKPLDEDGLRKECANIKTLGITAVAVVATFANINNDHELRATKIIKEALPNVDVVMSHTI 199
+K +D D LRK+ + G T++AV + DHEL KI +E + + + +
Sbjct: 172 MKKVDCDALRKDLQALYDEGFTSIAVCLAHSFTFPDHELLVGKIAEEVGFSNISLSTKLM 231
Query: 200 SGLGFIERENASILNASIKKFGRKII----KSFIHATK----EIGLNCTVLLSQNDGTVL 251
+ ++ R ++ +A + R+ + F+H K G+ C + Q+DG ++
Sbjct: 232 PMIKYVPRATSATADAYLSPVVRRYLAGFQSGFLHGLKTKDNSKGVRCEFM--QSDGGLV 289
Query: 252 STKDALETPIRTFSSGATNSMRGAAILCSDDPDVKNKSVIVCDIGGTTSDVGQLLPSGFP 311
+ + SG + G A L S D DVK VI D+GGT++DV + G
Sbjct: 290 DVNKF--SGLHAILSGPAGGVVGFA-LTSYDEDVK-IPVIGFDMGGTSTDVSRY---GGS 342
Query: 312 RQSSTFSYVGGVKMNFSMPHVESVGLGGGSIVRDQDGKLTAGPDSTGADIIKEAILFGGD 371
+ + GV + + +V GGGS + ++G GP+S GA GG
Sbjct: 343 YEHVFETTTAGVTIQSPQLDINTVAAGGGSRLFWKNGLFVVGPESAGAHPGPVCYRKGGY 402
Query: 372 I-VTTSDVNIGKRVDE-----FGVESLDPALKMGTVTNVKGRFTDEFKIRYDK------- 418
+ VT +++ +G+ + E FG D +L + + + T E +K
Sbjct: 403 LTVTDANLLLGRLLPESFPKIFGPNE-DESLDVESTRKEFEKLTAEINSGLEKERQMTAD 461
Query: 419 VIATKFERIIDRMKTSPDPIPVIFVGGGSFIAPDTLE-----------------GTSKVI 461
+A F +I + +T PI + G I+ L G ++V+
Sbjct: 462 EVAFGFIKIAN--ETMARPIRALTEAKGHDISIHRLTSFGGAGGQHCAAIAKSLGITQVL 519
Query: 462 KPPFYQVANAIGAALGKVSCTITEMKSLADFENEKTAYIEKLIHRATEDA 511
+ + +A G AL V + E S ++ T I+K E+A
Sbjct: 520 VHKYSSILSAYGMALADVVSEVQEPSSFT-LDDSNTESIKKRFDSLKEEA 568
>7291425 [E] KOG1939 Oxoprolinase
Length = 1276
Score = 56.6 bits (135), Expect = 2e-07
Identities = 90/429 (20%), Positives = 168/429 (38%), Gaps = 99/429 (23%)
Query: 1 MTNRKLLIGVDVGGTNSDLVVL--------------DPTRLGH-PDRGVLAWHKSVTTPD 45
M+ K +D GGT +D++ + DP R P G+ K T D
Sbjct: 1 MSGTKYCFAIDRGGTFTDVLCICPNGKVRTMKLLSEDPERYSDAPREGIRRILKEETGED 60
Query: 46 VSVGIQAAIKTILENPNNHIEKSEIVSVTIGTTHFINAVIERDSSRLEKVAVIRLSGPYG 105
++ + ++ S+I V +GTT NA++ER + V ++ SG
Sbjct: 61 LAA-------------SGLVDTSKIGWVRMGTTVATNALLERKG---DPVVLVVNSG--F 102
Query: 106 RHMPPFGD------FPEDLAEIINGYYCTLDGGCRVDGK--------------------- 138
R + G+ F ++ + N Y ++ CR+ K
Sbjct: 103 RDLLYIGNQARPKIFDLNIRKPANLYKSVVEVDCRIVPKQADRCELNHSWKELEGVAGTK 162
Query: 139 --DIKPLDEDGLRKECANIKTLGITAVAVVATFANINNDHELRATKIIKEALPNVDVVMS 196
+++P+DE +R+ ++ + G+++V+VV + +HELRA + +
Sbjct: 163 YLEVRPVDEVAVRQALSDARDQGVSSVSVVLAHSYACPEHELRAMPMCR----------- 211
Query: 197 HTISGLGFIERENASILNASIKKFGRKIIKSFIHATKEIGLNCTVLLSQNDGTVLSTKDA 256
+ R + A + + + SF + VL Q+DG + + ++
Sbjct: 212 -------VVARGYTACAEAYLTPHVDRYLASFKSGFDKQLEGVDVLFMQSDGGLTNMENF 264
Query: 257 LETPIRTFSSGATNSMRGAAILCSDDPDVKNKSVIVCDIGGTTSDVGQLLPSGFPRQSST 316
R SG + G A+ + + ++ +I D+GGT++DV R + T
Sbjct: 265 --RGARAILSGPAGGVVGYALTGARETEL---PLIGFDMGGTSTDVS--------RYAGT 311
Query: 317 FSYV-----GGVKMNFSMPHVESVGLGGGSIVRDQDGKLTAGPDSTGADIIKEAILFGGD 371
+ +V GV + + +V GGGS + + G GP+S G+ GG
Sbjct: 312 YEHVIESTTAGVTIQAPQLDINTVAAGGGSRLFFRSGIFVVGPESAGSHPGPACYKKGGP 371
Query: 372 IVTTSDVNI 380
+ T +D N+
Sbjct: 372 L-TVTDANL 379
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.137 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,898,804
Number of Sequences: 60738
Number of extensions: 2572293
Number of successful extensions: 5687
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5678
Number of HSP's gapped (non-prelim): 9
length of query: 1002
length of database: 30,389,216
effective HSP length: 116
effective length of query: 886
effective length of database: 23,343,608
effective search space: 20682436688
effective search space used: 20682436688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)