ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV0181 good A KOG0820 RNA processing and modification Ribosomal RNA adenine dimethylase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV0181 58856 57897 -320
(320 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL266w [A] KOG0820 Ribosomal RNA adenine dimethylase 521 e-148
SPBC336.02 [A] KOG0820 Ribosomal RNA adenine dimethylase 414 e-115
Hs7657198 [A] KOG0820 Ribosomal RNA adenine dimethylase 362 e-100
7301735 [A] KOG0820 Ribosomal RNA adenine dimethylase 342 4e-94
At2g47420 [A] KOG0820 Ribosomal RNA adenine dimethylase 320 1e-87
CE01536 [A] KOG0820 Ribosomal RNA adenine dimethylase 288 6e-78
ECU04g0460 [A] KOG0820 Ribosomal RNA adenine dimethylase 263 3e-70
At5g66360 [A] KOG0820 Ribosomal RNA adenine dimethylase 209 3e-54
At1g01860 [A] KOG0820 Ribosomal RNA adenine dimethylase 88 1e-17
CE13108 [A] KOG0821 Predicted ribosomal RNA adenine dimethylase 69 1e-11
Hs7705785 [A] KOG0821 Predicted ribosomal RNA adenine dimethylase 66 8e-11
Hs12732332 [A] KOG0821 Predicted ribosomal RNA adenine dimethylase 65 1e-10
7294685_2 [A] KOG0821 Predicted ribosomal RNA adenine dimethylase 51 3e-06
>YPL266w [A] KOG0820 Ribosomal RNA adenine dimethylase
Length = 318
Score = 521 bits (1343), Expect = e-148
Identities = 256/303 (84%), Positives = 282/303 (92%), Gaps = 1/303 (0%)
Query: 18 EVDAEKHLTTVFKFNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILE 77
+V AEKHL++VFKFNTDLGQHILKNPLVAQGIVDKAQI+PSD+VLE+GPGTGNLTVRILE
Sbjct: 17 QVSAEKHLSSVFKFNTDLGQHILKNPLVAQGIVDKAQIRPSDVVLEVGPGTGNLTVRILE 76
Query: 78 QARKVVAVEFDPRMAAELTKRVHGTPVEKKLEILLGDFMKTELPYFDVCISNTPYQISSP 137
QA+ VVAVE DPRMAAELTKRV GTPVEKKLEI+LGDFMKTELPYFD+CISNTPYQISSP
Sbjct: 77 QAKNVVAVEMDPRMAAELTKRVRGTPVEKKLEIMLGDFMKTELPYFDICISNTPYQISSP 136
Query: 138 LVFKLINQPKPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNF 197
LVFKLINQP+PPRVSILMFQREFA+RLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNF
Sbjct: 137 LVFKLINQPRPPRVSILMFQREFALRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNF 196
Query: 198 RPPPKVESSVVRIEIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKSTTVLEILEKNYK 257
RPPP+VESSVVR+EIKNPRPQVD+NEWDGLLRIVFVRKNRTI+AGFKSTTV++ILEKNYK
Sbjct: 197 RPPPQVESSVVRLEIKNPRPQVDYNEWDGLLRIVFVRKNRTISAGFKSTTVMDILEKNYK 256
Query: 258 AFLATQSAVPTTSSGDSLINEVKEKIEQVLSETGLAEKRAGKCDQTDFLKLLYGFHQVGI 317
FLA + + + G S+ + VKEKI+ VL ET L +KRAGKCDQ DFL+LLY FHQVGI
Sbjct: 257 TFLAMNNEMVDDTKG-SMHDVVKEKIDTVLKETDLGDKRAGKCDQNDFLRLLYAFHQVGI 315
Query: 318 HFA 320
HF+
Sbjct: 316 HFS 318
>SPBC336.02 [A] KOG0820 Ribosomal RNA adenine dimethylase
Length = 307
Score = 414 bits (1063), Expect = e-115
Identities = 207/304 (68%), Positives = 245/304 (80%), Gaps = 13/304 (4%)
Query: 20 DAEKHLTTVFKFNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQA 79
DAE TVFKFN D GQHILKNPLVAQGIVDKA +K SD VLE+GPGTGNLTVR+LE+A
Sbjct: 14 DAEVR-NTVFKFNKDFGQHILKNPLVAQGIVDKADLKQSDTVLEVGPGTGNLTVRMLEKA 72
Query: 80 RKVVAVEFDPRMAAELTKRVHGTPVEKKLEILLGDFMKTELPYFDVCISNTPYQISSPLV 139
RKV+AVE DPRMAAE+TKRV GTP EKKL+++LGD +KT+LPYFDVC+SNTPYQISSPLV
Sbjct: 73 RKVIAVEMDPRMAAEITKRVQGTPKEKKLQVVLGDVIKTDLPYFDVCVSNTPYQISSPLV 132
Query: 140 FKLINQPKPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRP 199
FKL+ Q PR +ILMFQREFA+RL+ARPGD LYCRLSANVQMWA+V HIMKVGKNNFRP
Sbjct: 133 FKLLQQRPAPRAAILMFQREFALRLVARPGDPLYCRLSANVQMWAHVKHIMKVGKNNFRP 192
Query: 200 PPKVESSVVRIEIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKSTTVLEILEKNYKAF 259
PP VESSVVRIE KNP P + F EWDGLLRIVF+RKN+TI A FK+++++E++E NY+ +
Sbjct: 193 PPLVESSVVRIEPKNPPPPLAFEEWDGLLRIVFLRKNKTIGACFKTSSIIEMVENNYRTW 252
Query: 260 LATQSAVPTTSSGDSLINE---VKEKIEQVLSETGLAEKRAGKCDQTDFLKLLYGFHQVG 316
S + ++ E VK I+ VL + L + RA KC QT+FL LL+ FHQVG
Sbjct: 253 ---------CSQNERMVEEDFDVKSLIDGVLQQCNLQDARASKCGQTEFLSLLHAFHQVG 303
Query: 317 IHFA 320
+HFA
Sbjct: 304 VHFA 307
>Hs7657198 [A] KOG0820 Ribosomal RNA adenine dimethylase
Length = 313
Score = 362 bits (929), Expect = e-100
Identities = 173/291 (59%), Positives = 227/291 (77%), Gaps = 8/291 (2%)
Query: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQARKVVAVEFDPR 90
FNT +GQHILKNPL+ I+DKA ++P+D+VLE+GPGTGN+TV++LE+A+KVVA E DPR
Sbjct: 30 FNTGIGQHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPR 89
Query: 91 MAAELTKRVHGTPVEKKLEILLGDFMKTELPYFDVCISNTPYQISSPLVFKLINQPKPPR 150
+ AEL KRV GTPV KL++L+GD +KT+LP+FD C++N PYQISSP VFKL+ R
Sbjct: 90 LVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVANLPYQISSPFVFKLLLHRPFFR 149
Query: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSVVRI 210
+ILMFQREFA+RL+A+PGD LYCRLS N Q+ A V H+MKVGKNNFRPPPKVESSVVRI
Sbjct: 150 CAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRI 209
Query: 211 EIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKSTTVLEILEKNYKAFLATQS-AVPTT 269
E KNP P ++F EWDGL+RI FVRKN+T++A FKS+ V ++LEKNY+ + + +P
Sbjct: 210 EPKNPPPPINFQEWDGLVRITFVRKNKTLSAAFKSSAVQQLLEKNYRIHCSVHNIIIPED 269
Query: 270 SSGDSLINEVKEKIEQVLSETGLAEKRAGKCDQTDFLKLLYGFHQVGIHFA 320
S + +KI+Q+L+ TG ++KRA D DF++LL+GF+ GIHF+
Sbjct: 270 FS-------IADKIQQILTSTGFSDKRARSMDIDDFIRLLHGFNAEGIHFS 313
>7301735 [A] KOG0820 Ribosomal RNA adenine dimethylase
Length = 306
Score = 342 bits (877), Expect = 4e-94
Identities = 169/289 (58%), Positives = 220/289 (75%), Gaps = 6/289 (2%)
Query: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQARKVVAVEFDPR 90
FN D GQHILKNPLV +++KA ++ +D+VLEIGPGTGN+TVR+LE+A+KV+A E D R
Sbjct: 23 FNKDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERAKKVIACEIDTR 82
Query: 91 MAAELTKRVHGTPVEKKLEILLGDFMKTELPYFDVCISNTPYQISSPLVFKLINQPKPPR 150
+AAEL KRV TP++ KL++L+GDF+K ELP+FD+CI+N PYQISSPL+FKL+ R
Sbjct: 83 LAAELQKRVQATPLQPKLQVLIGDFLKAELPFFDLCIANVPYQISSPLIFKLLLHRPLFR 142
Query: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSVVRI 210
++LMFQREFA RL+A+PGD LYCRLS N Q+ A V +MKVGKNNFRPPPKVESSVVR+
Sbjct: 143 CAVLMFQREFAERLVAKPGDKLYCRLSINTQLLARVDMLMKVGKNNFRPPPKVESSVVRL 202
Query: 211 EIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKSTTVLEILEKNYKAFLATQSAVPTTS 270
E KNP P V+F EWDGL RI F+RKN+T+AA FK T+VLE+LEKNYK + + ++ P
Sbjct: 203 EPKNPPPPVNFTEWDGLTRIAFLRKNKTLAATFKVTSVLEMLEKNYKLYRSLRNE-PIED 261
Query: 271 SGDSLINEVKEKIEQVLSETGLAEKRAGKCDQTDFLKLLYGFHQVGIHF 319
++++K+ +L E +A KRA D DF++LL F+ GIHF
Sbjct: 262 D-----FKMQDKVISILEEQDMAAKRARSMDIDDFMRLLLAFNSAGIHF 305
>At2g47420 [A] KOG0820 Ribosomal RNA adenine dimethylase
Length = 353
Score = 320 bits (821), Expect = 1e-87
Identities = 166/332 (50%), Positives = 218/332 (65%), Gaps = 36/332 (10%)
Query: 24 HLTTVFKFNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQARKVV 83
H F+ GQHILKNPL+ IV KA IK +D++LEIGPGTGNLT ++LE ++V+
Sbjct: 21 HYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKEVI 80
Query: 84 AVEFDPRMAAELTKRVHGTPVEKKLEILLGDFMKTELPYFDVCISNTPYQISSPLVFKLI 143
AVE D RM EL +R GTP +L+++ GD +KTELP FD+C++N PYQISSPL FKL+
Sbjct: 81 AVELDSRMVLELQRRFQGTPFSNRLKVIQGDVLKTELPRFDICVANIPYQISSPLTFKLL 140
Query: 144 NQPKPPRVSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPKV 203
P R +++M+QREFAMRL+A+PGD+LYCRLS N Q++A V+H++KVGKNNFRPPPKV
Sbjct: 141 FHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLYARVSHLLKVGKNNFRPPPKV 200
Query: 204 ESSVVRIEIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKSTTVLEILEKNYKAFLAT- 262
+SSVVRIE + P PQV+ EWDG LR+ F+RKN+T+ + FK +VL +LEKN+K A
Sbjct: 201 DSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIFKQKSVLSMLEKNFKTLQAVL 260
Query: 263 -------QSAVPTTSS--GDSLI--------------------------NEVKEKIEQVL 287
+ A+ TTS GD + +E KEK+ VL
Sbjct: 261 ASLQNNGEPALNTTSMDLGDQSMGMEDDDNEMDDDDMEMDEGEGDGGETSEFKEKVMNVL 320
Query: 288 SETGLAEKRAGKCDQTDFLKLLYGFHQVGIHF 319
E G EKR+ K Q +FL LL F++ GIHF
Sbjct: 321 KEGGFEEKRSSKLSQQEFLYLLSLFNKSGIHF 352
>CE01536 [A] KOG0820 Ribosomal RNA adenine dimethylase
Length = 304
Score = 288 bits (738), Expect = 6e-78
Identities = 151/290 (52%), Positives = 202/290 (69%), Gaps = 12/290 (4%)
Query: 31 FNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQARKVVAVEFDPR 90
FNTD GQHILKNP V IV+K+ +K +D VLE+GPGTGNLTV++LE A+ V+A E DPR
Sbjct: 24 FNTDKGQHILKNPGVVNAIVEKSALKATDTVLEVGPGTGNLTVKMLEVAKTVIACEIDPR 83
Query: 91 MAAELTKRVHGTPVEKKLEILLGDFMKTELPYFDVCISNTPYQISSPLVFKLINQPKPPR 150
M AE+ KRV GTP++ KL++ GD MK E P+FDVC++N PYQISSP V KL+ PR
Sbjct: 84 MIAEVKKRVMGTPLQNKLQVNGGDVMKMEWPFFDVCVANLPYQISSPFVQKLLLHRPLPR 143
Query: 151 VSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSVVRI 210
++LMFQ+EFA RL+ARPGD Y RLS NVQ+ A V +MKV + FRPPPKV+S+VVRI
Sbjct: 144 YAVLMFQKEFADRLVARPGDKDYSRLSVNVQLLAKVEMLMKVKRTEFRPPPKVDSAVVRI 203
Query: 211 EIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKSTTVLEILEKNYKAFLATQS-AVPTT 269
KNP P EW+GLLR+ F+RKN+T+ A F+ + V+E++E N++ + ++ +P
Sbjct: 204 APKNPPPP----EWEGLLRLCFMRKNKTLMAIFRLSNVIEVIEDNFRKVCSFKNKPIPKD 259
Query: 270 SSGDSLINEVKEKIEQVLSETGLAEKRAGKCDQTDFLKLLYGFHQVGIHF 319
+ +K+ IE+ L+ +G E RA K DFL LL F++ IHF
Sbjct: 260 LN-------MKKVIEETLTASGYGESRARKMRVEDFLALLLAFNKADIHF 302
>ECU04g0460 [A] KOG0820 Ribosomal RNA adenine dimethylase
Length = 277
Score = 263 bits (672), Expect = 3e-70
Identities = 141/291 (48%), Positives = 197/291 (67%), Gaps = 19/291 (6%)
Query: 30 KFNTDLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQARKVVAVEFDP 89
KFN GQHILKN V I+++A+IKP+D VLE+G GTGNLT+++L++A+KVV E DP
Sbjct: 5 KFNKQHGQHILKNLGVIDTIIERARIKPTDTVLEVGGGTGNLTMKLLQKAKKVVCYEIDP 64
Query: 90 RMAAELTKRVHGTP-VEKKLEILLGDFMKTELPYFDVCISNTPYQISSPLVFKLINQPKP 148
R+AAEL K+V+GTP + +K ++ +GD +K + P+FD+CI+N PYQISSP VFKL+
Sbjct: 65 RLAAELAKKVNGTPGMAQKFQLFVGDALKHDFPHFDLCITNLPYQISSPFVFKLLKYDF- 123
Query: 149 PRVSILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSVV 208
+ + +MFQ+EF+ RL+ARPG YCRLS Q+ A + H++KV KN+F PPPKVESS V
Sbjct: 124 -KCAFIMFQKEFSDRLVARPGSPEYCRLSVGAQILAQIDHVLKVSKNSFVPPPKVESSFV 182
Query: 209 RIEIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFKSTTVLEILEKNYKAFLATQSAVPT 268
RIE + PRP +D E+D L+I F+RKN+T+ A FK+++++ + KN F ++ P
Sbjct: 183 RIEPRIPRPPIDLGEFDRFLKICFLRKNKTLRANFKNSSLVSKI-KNDPNF---ENTTP- 237
Query: 269 TSSGDSLINEVKEKIEQVLSETGLAEKRAGKCDQTDFLKLLYGFHQVGIHF 319
+ E+VLS LA RA K D DFL LL F +V I+F
Sbjct: 238 -----------DDVFERVLSGADLAGARAAKMDLDDFLALLLEFRKVNIYF 277
>At5g66360 [A] KOG0820 Ribosomal RNA adenine dimethylase
Length = 380
Score = 209 bits (533), Expect = 3e-54
Identities = 122/301 (40%), Positives = 168/301 (55%), Gaps = 17/301 (5%)
Query: 36 GQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQARKVVAVEFDPRMAAEL 95
GQH+L N + IV + I+P+D VLEIGPGTGNLT+++LE A+ VVAVE D RM L
Sbjct: 68 GQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAVELDKRMVEIL 127
Query: 96 TKRVHGTPVEKKLEILLGDFMKTELPYFDVCISNTPYQISSPLVFKLINQPKPPRVSILM 155
KRV KL I+ D +KT+ P+FD+ ++N PY ISSPLV KL+ R + L+
Sbjct: 128 RKRVSDHGFADKLTIIQKDVLKTDFPHFDLVVANIPYNISSPLVAKLVYGSNTFRSATLL 187
Query: 156 FQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSVVRIEIKNP 215
Q+EF+ RLLA PGDS + RL+ NV++ A+V +M V K F PPPKV+SSV+RI K
Sbjct: 188 LQKEFSRRLLANPGDSDFNRLAVNVKLVADVKFVMDVSKREFVPPPKVDSSVIRITPKEI 247
Query: 216 RPQVDFNEWDGLLRIVFVRKNRTIAAGFKSTTVLEILEKNYKAFLATQSAVPTTSSGDS- 274
P V+ EW R F +KN+T+ + F+ + L+ + V + GDS
Sbjct: 248 IPDVNVQEWLAFTRTCFGKKNKTLGSMFRQKKKVMELQSLSAGRHGSNVEVMNQTGGDSD 307
Query: 275 ----------------LINEVKEKIEQVLSETGLAEKRAGKCDQTDFLKLLYGFHQVGIH 318
+ KE++ ++L G EKR K + L LL F+Q GI
Sbjct: 308 SDVEEDGKDDLLCLDTDASMFKERVIEILRTNGFEEKRPSKLSHRELLHLLSLFNQAGIF 367
Query: 319 F 319
F
Sbjct: 368 F 368
>At1g01860 [A] KOG0820 Ribosomal RNA adenine dimethylase
Length = 343
Score = 88.2 bits (217), Expect = 1e-17
Identities = 72/275 (26%), Positives = 126/275 (45%), Gaps = 29/275 (10%)
Query: 35 LGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQARKVVAVEFDPRMAAE 94
LGQH + N + + A +K D VLEIGPGTG+LT ++ V+A+E DP M
Sbjct: 75 LGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAIEKDPHMVDL 134
Query: 95 LTKRVHGTPVEKKLEILLGDFMKTELPYFDVCI-----------------SNTPYQISSP 137
+++R G+ K ++L DF+K + + I SN P+ IS+
Sbjct: 135 VSERFAGS---DKFKVLQEDFVKCHIRSHMLSILETRRLSHPDSALAKVVSNLPFNISTD 191
Query: 138 LVFKLINQPKPPRVSILMFQREFAMRLLARP-GDSLYCRLSANVQMWANVTHIMKVGKNN 196
+V L+ +L+ Q E A+RL+ S Y ++ + ++ + +V + N
Sbjct: 192 VVKLLLPMGDIFSKVVLLLQDEAALRLVEPALRTSEYRPINILINFYSEPEYNFRVPREN 251
Query: 197 FRPPPKVESSVVRIEIKNPRPQVDFNEWDGLLRIV---FVRKNRTIAAGFKSTTVLEILE 253
F P PKV+++VV ++K+PR D + +V F K + + + + +E
Sbjct: 252 FFPQPKVDAAVVTFKLKHPRDYPDVSSTKNFFSLVNSAFNGKRKMLRKSLQHISSSPDIE 311
Query: 254 KNYKAFLATQSAVPTTSSGDSLINEVKEKIEQVLS 288
K + +P TS + L + K+ V++
Sbjct: 312 KALGV-----AGLPATSRPEELTLDDFVKLHNVIA 341
>CE13108 [A] KOG0821 Predicted ribosomal RNA adenine dimethylase
Length = 313
Score = 68.6 bits (166), Expect = 1e-11
Identities = 74/269 (27%), Positives = 111/269 (40%), Gaps = 36/269 (13%)
Query: 35 LGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILEQ-ARKVVAVEFDPRM-- 91
L Q+ L + + + I A++ D V+EIGPG G +T ILE A ++ VE D R
Sbjct: 28 LSQNYLMDMNITRKIAKHAKVIEKDWVIEIGPGPGGITRAILEAGASRLDVVEIDNRFIP 87
Query: 92 -------AAELTKRVHGTPVEKKLEILLGDFMKTE-------------LPYFDVCISNTP 131
AA+ +H + L +GD K E LP V I N P
Sbjct: 88 PLQHLAEAADSRMFIHH---QDALRTEIGDIWKNETARPESVDWHDSNLPAMHV-IGNLP 143
Query: 132 YQISSPLVFKLINQPKPPR--------VSILMFQREFAMRLLARPGDSLYCRLSANVQMW 183
+ I+SPL+ K + R L FQ E A RL + R+S Q
Sbjct: 144 FNIASPLIIKYLRDMSYRRGVWQYGRVPLTLTFQLEVAKRLCSPIACDTRSRISIMSQYV 203
Query: 184 ANVTHIMKVGKNNFRPPPKVESSVVR-IEIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAG 242
A + ++ + F P P+V+ VVR + K P F + + R VF + + + G
Sbjct: 204 AEPKMVFQISGSCFVPRPQVDVGVVRFVPRKTPLVNTSFEVLEKVCRQVFHYRQKYVTKG 263
Query: 243 FKSTTVLEILEKNYKAFLATQSAVPTTSS 271
K+ E+ ++ L PTT+S
Sbjct: 264 LKTLYPEELEDELSDDLLKKCRIDPTTTS 292
>Hs7705785 [A] KOG0821 Predicted ribosomal RNA adenine dimethylase
Length = 346
Score = 65.9 bits (159), Expect = 8e-11
Identities = 66/236 (27%), Positives = 101/236 (41%), Gaps = 27/236 (11%)
Query: 34 DLGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILE-QARKVVAVEFDPRMA 92
+L Q+ L + + IV KA + V E+GPG G +T IL +++ VE D R
Sbjct: 32 ELSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSILNADVAELLVVEKDTRFI 91
Query: 93 AELT----------KRVHGTPVEKKLEILLGDFMKTELPYFDV-----CISNTPYQISSP 137
L + VHG + K+E + +K P+ D I N P+ +S+P
Sbjct: 92 PGLQMLSDAAPGKLRIVHGDVLTFKVEKAFSESLKR--PWEDDPPNVHIIGNLPFSVSTP 149
Query: 138 LVFKLINQPK---PPRV-----SILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHI 189
L+ K + P V L FQ+E A RL A G RLS Q NV HI
Sbjct: 150 LIIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLSVMAQYLCNVRHI 209
Query: 190 MKVGKNNFRPPPKVESSVVRI-EIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFK 244
+ F P P+V+ VV + P+ + F + +++ VF + + G +
Sbjct: 210 FTIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRRKYCHRGLR 265
>Hs12732332 [A] KOG0821 Predicted ribosomal RNA adenine dimethylase
Length = 346
Score = 65.1 bits (157), Expect = 1e-10
Identities = 66/235 (28%), Positives = 100/235 (42%), Gaps = 27/235 (11%)
Query: 35 LGQHILKNPLVAQGIVDKAQIKPSDIVLEIGPGTGNLTVRILE-QARKVVAVEFDPRMAA 93
L Q+ L + + IV KA + V E+GPG G +T IL +++ VE D R
Sbjct: 33 LSQNFLLDLRLTDKIVRKAGNLTNAYVYEVGPGPGGITRSILNADVAELLVVEKDTRFIP 92
Query: 94 ELT----------KRVHGTPVEKKLEILLGDFMKTELPYFDV-----CISNTPYQISSPL 138
L + VHG + K+E + +K P+ D I N P+ +S+PL
Sbjct: 93 GLQMLSDAAPGKLRIVHGDVLTFKVEKAFSESLKR--PWEDDPPNVHIIGNLPFSVSTPL 150
Query: 139 VFKLINQPK---PPRV-----SILMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIM 190
+ K + P V L FQ+E A RL A G RLS Q NV HI
Sbjct: 151 IIKWLENISCRDGPFVYGRTQMTLTFQKEVAERLAANTGSKQRSRLSVMAQYLCNVRHIF 210
Query: 191 KVGKNNFRPPPKVESSVVRI-EIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGFK 244
+ F P P+V+ VV + P+ + F + +++ VF + + G +
Sbjct: 211 TIPGQAFVPKPEVDVGVVHFTPLIQPKIEQPFKLVEKVVQNVFQFRRKYCHRGLR 265
>7294685_2 [A] KOG0821 Predicted ribosomal RNA adenine dimethylase
Length = 284
Score = 50.8 bits (120), Expect = 3e-06
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 33/217 (15%)
Query: 35 LGQHILKNPLVAQGIVDKA-QIKPSDIVLEIGPGTGNLTVRILEQARKVVAVEFDPRMAA 93
L Q+ L + + IV A +I P D+VLE +++ VE DPR
Sbjct: 26 LSQNFLMDERLTDKIVKSAGRIDPRDLVLE-----------------RLLLVEKDPRFGE 68
Query: 94 ELTK-RVHGTPVEKKLEILLGDFMKTELPYFDVCISNTPYQISSPLVFKLINQPKPPRVS 152
L + +P+ + +I D ++ + I +T S + + N P+
Sbjct: 69 TLQLLKECASPLNIQFDIHYDDILRFNIEQH---IPDT-----SQRIHLIGNLPRGAFRR 120
Query: 153 I-----LMFQREFAMRLLARPGDSLYCRLSANVQMWANVTHIMKVGKNNFRPPPKVESSV 207
I L FQ+E A R+ A G CRLS Q+W + F P P+V+ V
Sbjct: 121 IDTCMTLTFQQEVAERICAPVGGEQRCRLSVMSQVWTEPVMKFTIPGKAFVPKPQVDVGV 180
Query: 208 VR-IEIKNPRPQVDFNEWDGLLRIVFVRKNRTIAAGF 243
V+ I +K P+ Q+ F+ + ++R +F + + G+
Sbjct: 181 VKLIPLKRPKTQLPFHLVERVVRHIFSMRQKYCRRGY 217
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.137 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,440,797
Number of Sequences: 60738
Number of extensions: 777143
Number of successful extensions: 1922
Number of sequences better than 1.0e-05: 13
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1895
Number of HSP's gapped (non-prelim): 14
length of query: 320
length of database: 30,389,216
effective HSP length: 106
effective length of query: 214
effective length of database: 23,950,988
effective search space: 5125511432
effective search space used: 5125511432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)