ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV0240 good K KOG1926 Transcription Predicted regulator of rRNA gene transcription (MYB-binding protein)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV0240 73422 76481 1020
(1020 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YEL055c [K] KOG1926 Predicted regulator of rRNA gene transcripti... 772 0.0
SPBC14C8.14c [K] KOG1926 Predicted regulator of rRNA gene transc... 252 2e-66
At5g64420 [K] KOG1926 Predicted regulator of rRNA gene transcrip... 79 4e-14
>YEL055c [K] KOG1926 Predicted regulator of rRNA gene transcription
(MYB-binding protein)
Length = 1022
Score = 772 bits (1994), Expect = 0.0
Identities = 474/1050 (45%), Positives = 631/1050 (59%), Gaps = 72/1050 (6%)
Query: 6 VVSRVNRDLFFKVASELEKERLEAAIQLINEISRVDTRESEDGVREWEYVIGRLVKGLAS 65
+ +VNRDLFFK+AS+L +ERL AA+ LI ++S +D D EW YV+ RL+KGL+S
Sbjct: 1 MTGKVNRDLFFKLASDLREERLHAAVALIKDLSALDL---PDDAEEWSYVLNRLIKGLSS 57
Query: 66 NRGGARLGFSMCLTEVIALAL-----ERRDILPSIYAFLNQLEQTLPAGT-----AFKNG 115
+R ARLGFS+CLTEVI LA+ +R L S FL+ L L G
Sbjct: 58 DRNSARLGFSLCLTEVINLAVNMPPGQRPKGLESTNEFLSTLSTILNVNVNEGTKKSMKG 117
Query: 116 KEERGVLFGQMFALQSLLNEPVFSKLFLSTDDNSINMEFLLTYLNKLIQLALSKTWLREP 175
K+ERG+LFG++F L+SLLNEP+FS++F+ D N EF + + +LI LAL K W++EP
Sbjct: 118 KDERGILFGKLFGLKSLLNEPLFSEIFVK-DLEKGNTEFFIRFTEQLIDLALKKNWIKEP 176
Query: 176 CLYSVYQTIQKCETRLFNDPTAINLILGLLDEKKLTLTNEGLSIYLMFNAQRDT--YSSS 233
C ++++QT++ F D ++ IL + D+ LTLTNEGLS YL+ + D S
Sbjct: 177 CFFTLFQTMKMLLP--FMDESSAEKILLIYDKYDLTLTNEGLSTYLLLKYEGDESLIPSV 234
Query: 234 LVIHNSGWKNNDPLSKGNVQLLASVLKD--VVPVEKSDLK----QKGT-WAPRLHYVWDI 286
L + N GWK+NDPL++GN+ LL VL++ V+P LK QK T W PRLH+VW +
Sbjct: 235 LDLKNPGWKDNDPLARGNLPLLTKVLRNSSVIPDANGGLKETKKQKNTNWNPRLHFVWSV 294
Query: 287 LLPLLEDDGSFGQSMESHISKKRKKNTASMSSERTGRIQFPDFWQAVVDESFFNEKSSNE 346
LLPL G+ SHISKKRKK + + IQFP+FW+ VDESFFNEK+S+E
Sbjct: 295 LLPLF---GNGKLENTSHISKKRKKTN---NKKVQNSIQFPEFWKMAVDESFFNEKASSE 348
Query: 347 RKYLGFLILEEAIKVCSPKLIQVLLSQNLLRCIINQSQDSQRMLNKISTQALKSIVAECE 406
RKYLGFLI++ A K I SQN++R +INQS DSQR+LNKIS L SIV CE
Sbjct: 349 RKYLGFLIIDAAFKAVPGSYIGFCFSQNVMRTLINQSIDSQRVLNKISQLTLDSIVKACE 408
Query: 407 RSPA-KVVPLVEVFWFGRNGSINFDKLIKSKLVNSLISTSSLEKEHLVDLVNLLISQLPQ 465
A ++VP + FG +GSINFDKL KS V+ LI+ L L L+++ QL
Sbjct: 409 EDSANRLVPCLNAMLFGPHGSINFDKLTKSGTVSKLIAIKELPSTVLAQLLDVFFLQL-- 466
Query: 466 DQSTKDSFNLTRFIFDTFLHITRAHKTRL-ESHWVKPLLSAIIKAAFF-NESDNSKLS-- 521
Q K + T F D+ LHI RAHK + + +KP+L I+ AFF + SD+ KL
Sbjct: 467 -QDKKGVLSHTLFALDSILHIVRAHKVEINDMDIMKPVLRPIVYMAFFKHTSDDLKLEQL 525
Query: 522 -ELAKERLYSILGELI--SEPSKSSGDISTWPYIALQIILKIEGSG-STLSIDLDEDLES 577
ELAKERLYSILGEL E +I++W Y+ L++IL IE S L LDE+LE+
Sbjct: 526 HELAKERLYSILGELTINKEIRCKDPEINSWQYLTLKLILDIENSHVGDLINPLDENLEN 585
Query: 578 VRKSAIKSLKQNHSDNKNNTNPKLNGLELLLSVAILQLYAGDEESVSILQDLISFYEECD 637
++ AI L S + + GL LLS+ ++QLYAGD +S+S++++L F +
Sbjct: 586 IKNEAISCL----SKVCRSRTAQSWGLSTLLSMCLVQLYAGDTDSISVIEELCEFSKH-- 639
Query: 638 KESTDLVGITEILLSLVAQRKSLLKKLSLIVWESFVHDIGEPELNVLLQTLTARENKQGF 697
E+ +VGITEILLSL+AQ+K+LL+KLSLI+W+ F+ ++G EL +LL L ARENKQGF
Sbjct: 640 -ENNSMVGITEILLSLLAQKKALLRKLSLIIWQQFIEEVGLEELQILLDILKARENKQGF 698
Query: 698 ADLFEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEKIEK 757
A LFEG L I+K
Sbjct: 699 AQLFEGEEEFEEIKEENDASEDESKTGSESESESESDSDDADEKDEEDEANEDIL-NIDK 757
Query: 758 EATSALAKALNLPDSIVGEHGDVQLGNNXXXXXXXXXXXXXXXXXXXXXXXXXAMMQLDD 817
EATSAL KALNLPD+IV + G+V L MM+LDD
Sbjct: 758 EATSALVKALNLPDNIVNDKGEVDLDQ------LEGLSDDGGDDEDEESMDDEKMMELDD 811
Query: 818 QLSEIFKRRKEALGSVPTGNKRKVEVQESRENVISFKHRVVDMLEIYVKSFDRAVARNNT 877
QLSEIFKRRKEAL S+ TGN+RK EV++SRENVISFKHRVVDML +YVK ++ N +
Sbjct: 812 QLSEIFKRRKEALSSISTGNQRKFEVKQSRENVISFKHRVVDMLAVYVKYCEKLTLANKS 871
Query: 878 SIITVEEWNNLSS-------IILPLLKCLQHTLDKALADKCAKLMKLRLCKVKATIAKEE 930
E NNL I+P+LKC+ TLD+ LADK +KL+K ++ K+K T A ++
Sbjct: 872 -----EHSNNLGGSLSKLVYFIIPMLKCVNETLDRPLADKISKLLKGKIFKIKVT-AFKD 925
Query: 931 KTVTSEIFHLLEKVHKLIMTAKPGQFQQLFFSTCSLASLFLSKLYLSSGGSH--ENLIDL 988
E+ LL+K HKL++T+KPGQ +F+S CS +SLFLSKLY+ GG+ + LIDL
Sbjct: 926 MNKDIELMDLLKKTHKLMLTSKPGQHAAVFYSMCSTSSLFLSKLYVEIGGNDKLDELIDL 985
Query: 989 YADTSKAWMKDGKCTVNFFIDFSNWLQTKR 1018
Y T+K WM+ GKC N FIDF NWL +K+
Sbjct: 986 YTATTKEWMQKGKCGPNIFIDFINWLSSKK 1015
>SPBC14C8.14c [K] KOG1926 Predicted regulator of rRNA gene transcription
(MYB-binding protein)
Length = 959
Score = 252 bits (643), Expect = 2e-66
Identities = 205/732 (28%), Positives = 354/732 (48%), Gaps = 90/732 (12%)
Query: 6 VVSRVNRDLFFKVASELEKERLEAAIQLINEISRVDTRESEDGVREWEYVIGRLVKGLAS 65
+ ++ +LF K+ S + RL +A QLI+ +S + E +Y + RL KGL+S
Sbjct: 1 MATKTQLELFTKLTSNDKAIRLSSAAQLIDSLSNEE---------ELKYSLNRLTKGLSS 51
Query: 66 NRGGARLGFSMCLTEVIALALERRDILPSIYAFLNQLEQTLPAGTAFKN--GKEERGVLF 123
R AR+GF++ LTE++ +DI + + L+ + TA N G++ER F
Sbjct: 52 GRESARIGFAVALTELLT---RTKDIRAT-----HVLDLLVKHNTASGNLKGQDERDFYF 103
Query: 124 GQMFALQSLLNEPVFSKLFLSTDDNSINMEFLLTYLNKLIQLALSKTWLREPCLYSVYQT 183
G +F LQS+ V+S + + +E ++ L+QL+ K WL++ C Y +Y+
Sbjct: 104 GLLFGLQSI----VYSGILTHKEST---IEDFQRVVDLLLQLSGKKNWLQDVCFYVIYKL 156
Query: 184 IQKCETRLFNDPTAINLILGLLDEKKLTLTNEGLSIYLMFNAQRDTYSSSLVIHNSGWKN 243
+++ F+ A + LL ++ + EG+ ++L D S V + W+
Sbjct: 157 VEQIPEISFSS-NAFLAVNKLLQTPAVSKSTEGVGLFLCLTRVPDNVKSEEVAM-ANWEP 214
Query: 244 NDPLSKGNVQLLASVLKDVVPVEKSDLKQKGTWAPRLHYVWDILLPLLEDDGSFGQSMES 303
PL K N+ L+ +++ E Q W ++ VW
Sbjct: 215 AHPLHKSNLVTLSKIMRQADASETGG--QNSAWKQKIPMVW------------------K 254
Query: 304 HISKKRKKNTASMSSERTGRIQFPDFWQAVVDESFFNEKSSNERKYLGFLILEEAIKVCS 363
+I ++ ++ T S G F DFW VVDE F+ SS ERK+ GF I+E A+ S
Sbjct: 255 YIFEEYQRKTYS------GLAPFHDFWAVVVDEGIFSSTSSLERKFWGFQIMELALDYVS 308
Query: 364 PKLIQVLLSQNLLRCIINQSQDSQRMLNKISTQALKSIVAECERSPAKVVPLVEVFWFGR 423
I + S+N L C+IN D R L + + + + +++P V P + + G
Sbjct: 309 SDNIGDIFSKNFLHCLINHLSDEDRYLYRAAKRVTSKLEKVSKQNPTLVYP-IAIHLLGE 367
Query: 424 NGSINFDKLIKSKLVNSLISTSSLEKEHLVDLVNLLIS---QLPQD--QSTKDSFNLTRF 478
GS+NFD++ +KLV ++ + +++ ++ L LL+S + P+D TK ++
Sbjct: 368 RGSLNFDRVTNTKLVEHILPLA--DEQGILQLFQLLLSYVKRCPEDIASDTKAVEWRRQW 425
Query: 479 IFDTFLHITRAHKTRLESHWVKPLLSAIIKAAFFNESDNS----KLSE----LAKERLYS 530
DT L I R+ ++ + WV+ LL I +F ++ K SE + + RL S
Sbjct: 426 ATDTMLSILRSKRSIKQEPWVRELLEIFIAYGYFEVPESEEVIPKFSEGTQNMFRLRLMS 485
Query: 531 ILGELISEPSKSS------GDISTWPYIALQIILKIEGS-GSTLSIDLDED-LESVRKS- 581
L L S + S GD WPY+AL +L++E S + L I +DE +E V+KS
Sbjct: 486 ALSYLSSSAFQQSQTDHQLGD-KNWPYVALNYLLELEKSPKNNLLISMDESVIEIVQKSL 544
Query: 582 AIKSLKQNHSDNKNNTNPKLNGLELLLSVAILQLYAGDEESVSILQDLISFY-------- 633
++ D K +LN +LL S+ +LQ+YAGD +S+ +L+D+ + Y
Sbjct: 545 SVLHKVTKKIDKKAQHLQQLNAFQLLYSLVLLQVYAGDTDSIDVLEDIDNCYSKVFNKKS 604
Query: 634 --EECDKESTDLVGITEILLSLVAQRKSLLKKLSLIVWESFVHDIGEPELNVLLQTLTAR 691
E E T + +TE++LSL+++ LL+KL +++ SF D+ ++++ L A+
Sbjct: 605 KRESTSNEPTAMEILTEVMLSLLSRPSLLLRKLVDMLFTSFSEDMNRESIHLICDVLKAK 664
Query: 692 ENKQGFADLFEG 703
E+ + +F G
Sbjct: 665 ESVKDSEGMFAG 676
Score = 72.4 bits (176), Expect = 3e-12
Identities = 57/210 (27%), Positives = 101/210 (47%), Gaps = 42/210 (20%)
Query: 812 MMQLDDQLSEIFKRRKEALGSVPTGNKRKVEVQESRENVISFKHRVVDMLEIYVKSFDRA 871
M+ LD++L+E+F+ RK+A + ++K QE+++ ++ FK +V+D+++ Y K+
Sbjct: 753 MLALDEKLAEVFRERKKA-----SNKEKKKNAQETKQQIVQFKVKVIDLIDNYYKT---- 803
Query: 872 VARNNTSIITVEEWNNLS-SIILPLLKCLQHTLDKALADKCAKLMKLRLCKVKATIAKEE 930
+ N L ++PLL+ + T K L +K + + RL K+K T EE
Sbjct: 804 -----------QPNNGLGFEFLIPLLEMILKTKHKVLEEKGQAVFRNRLSKLKWT---EE 849
Query: 931 KTVTSEIFHLLEKVHKLIMTAKPGQFQQLFFSTCSLASLFLSKL----YLSSGGSHENLI 986
K + + L+KVH L G+ L + S++ L L L YL G +
Sbjct: 850 KPSSKNVLEALKKVHVLC-----GKKASLGSTGSSISQLLLKLLADTPYLKEG------V 898
Query: 987 DLYADTSKAWMKD---GKCTVNFFIDFSNW 1013
++Y + W+++ N F DF NW
Sbjct: 899 EVYLKSFLLWIQEPSKSHYNANIFHDFINW 928
>At5g64420 [K] KOG1926 Predicted regulator of rRNA gene transcription
(MYB-binding protein)
Length = 1306
Score = 79.0 bits (193), Expect = 4e-14
Identities = 100/434 (23%), Positives = 187/434 (43%), Gaps = 53/434 (12%)
Query: 54 YVIGRLVKGLASNRGGARLGFSMCLTEVIALALERRDILPSIYAFLNQLEQTLPAGTAFK 113
Y + RL++G++S+R AR GF++ LT +++ ++ + LN + +L ++
Sbjct: 188 YALRRLIRGVSSSRECARQGFALGLTLPVSVISSI-----NVESLLNLIADSLSVSSSM- 241
Query: 114 NGKEERGVLFGQMFALQSLLNEPVFSKLFLSTDDNSINMEFLLTYLNKLIQLALSKTWLR 173
G++ + L G++FA +L + + S D+ I EF N LI LA K +L+
Sbjct: 242 TGQDIKECLLGRLFAYGALARSGRLIEDWQSDKDSPIIKEFT----NALIGLAAKKRYLQ 297
Query: 174 EPCLYSVYQTIQKCETRLFNDPTAINLILGLLDEKKLTLTNEGLSIYLMFN-----AQRD 228
EP ++ + + K T E +T E +Y F D
Sbjct: 298 EPAVHILLDFVDKLPT-----------------EPVVTHVMEAPELYKWFEQATEVGNPD 340
Query: 229 TYSSSLVIHNSGWKNNDPLSKGNVQLLAS---VLKDVVPVEKSDLKQKGTWAPRLHYVWD 285
+L +H ++ SK +S D + + LK+ PR+H +W
Sbjct: 341 ALLLALKLHEKVSVDHPIFSKLLPVPFSSGKFFSADHLTAIGNCLKESTFCQPRVHSLWP 400
Query: 286 ILLPLLEDDGSFGQSME----SHISKKRKKNTASMSSERTGRIQFPDFWQAVVDESFFNE 341
+++ +L + QS + S SKK+K+N S E +F + ++ +
Sbjct: 401 VIVDMLLPEAVV-QSEDVVSVSSSSKKQKRNRKSNPVEEEATNNIRNFCEVFMEGDLLS- 458
Query: 342 KSSNERKYLGFLILEEAIKVCSPKLIQVLLSQNLLRCIINQSQDSQRMLNKISTQALKSI 401
S++ RK+L F IL + IQ +LS ++C+++ L+K++T L +
Sbjct: 459 -STHVRKHLAFDILLLLLPKLPASFIQHVLSLKFVQCLMDILSTKDSWLHKVATHFLVEL 517
Query: 402 VAECERSPAKVVPLVEVFWFGRNGSINFDKLIKSKLVNSLISTSSLEKE-----HLVDLV 456
+ + K V + G FD + ++K V L + LE E +L +L+
Sbjct: 518 MDWVKDDDTKRVAVTMALQKHSEG--KFDNITRTKTVKVL--AAELETEDGCTLYLQNLM 573
Query: 457 NLLISQ--LPQDQS 468
NL + + +P++ S
Sbjct: 574 NLFVDEQHVPEESS 587
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.134 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,147,397
Number of Sequences: 60738
Number of extensions: 2130349
Number of successful extensions: 6465
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6430
Number of HSP's gapped (non-prelim): 7
length of query: 1020
length of database: 30,389,216
effective HSP length: 116
effective length of query: 904
effective length of database: 23,343,608
effective search space: 21102621632
effective search space used: 21102621632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)