ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV0244 check: MH B KOG0264 Chromatin structure and dynamics Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV0244 77913 76690 -408
(408 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YEL056w [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 437 e-122
Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 306 4e-83
SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 298 1e-80
7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 295 8e-80
Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 294 1e-79
CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 278 1e-74
At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 275 1e-73
At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 248 2e-65
At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 245 8e-65
ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 221 2e-57
CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 216 4e-56
SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 213 3e-55
Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 211 2e-54
Hs17463450 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 201 2e-51
SPAC25H1.06 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 152 7e-37
YBR195c [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 149 6e-36
At2g19520 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 144 2e-34
Hs13631383 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 142 1e-33
Hs20551282 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 129 8e-30
At4g29730 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 121 2e-27
At2g19540 [R] KOG0302 Ribosome Assembly protein 97 4e-20
SPBC1711.07 [R] KOG0302 Ribosome Assembly protein 95 2e-19
7302218 [R] KOG0302 Ribosome Assembly protein 82 2e-15
Hs13899346 [R] KOG0302 Ribosome Assembly protein 80 4e-15
At1g29260 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 80 5e-15
YMR131c [R] KOG0302 Ribosome Assembly protein 75 2e-13
CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 74 3e-13
Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 74 4e-13
SPBC1711.16 [S] KOG0270 WD40 repeat-containing protein 73 7e-13
Hs5902034 [S] KOG0270 WD40 repeat-containing protein 73 9e-13
CE27292 [R] KOG0302 Ribosome Assembly protein 71 3e-12
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 71 3e-12
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 71 3e-12
Hs20533300 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 70 4e-12
7296695 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 70 4e-12
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 70 6e-12
YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 68 3e-11
YDL195w [U] KOG0307 Vesicle coat complex COPII subunit SEC31 67 4e-11
CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 66 8e-11
At3g63460 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 66 8e-11
At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 66 8e-11
Hs22060896 [T] KOG4378 Nuclear protein COP1 66 1e-10
7302720 [R] KOG0266 WD40 repeat-containing protein 65 1e-10
SPBC1198.12 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 a... 64 3e-10
7301821 [S] KOG0269 WD40 repeat-containing protein 64 3e-10
SPBC1A4.07c [A] KOG0268 Sof1-like rRNA processing protein (conta... 63 7e-10
Hs4557467 [KL] KOG4283 Transcription-coupled repair protein CSA ... 63 9e-10
At1g27840 [KL] KOG4283 Transcription-coupled repair protein CSA ... 63 9e-10
SPBC8D2.20c [U] KOG0307 Vesicle coat complex COPII subunit SEC31 62 1e-09
SPAP17D4.01 [U] KOG0277 Peroxisomal targeting signal type 2 rece... 62 2e-09
YLL011w [A] KOG0268 Sof1-like rRNA processing protein (contains ... 62 2e-09
Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit ... 62 2e-09
SPAC144.13c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 a... 61 3e-09
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 61 3e-09
At1g19750 [KL] KOG4283 Transcription-coupled repair protein CSA ... 61 3e-09
Hs14784298 [R] KOG4227 WD40 repeat protein 61 3e-09
Hs7019573 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 ... 60 4e-09
CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 60 6e-09
SPBC577.09 [KL] KOG4283 Transcription-coupled repair protein CSA... 59 1e-08
CE01695 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and A... 59 1e-08
7290304 [S] KOG0310 Conserved WD40 repeat-containing protein 59 1e-08
SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subun... 59 1e-08
At4g35370 [S] KOG0270 WD40 repeat-containing protein 59 2e-08
Hs14149987 [S] KOG0269 WD40 repeat-containing protein 58 2e-08
YPL247c [S] KOG0290 Conserved WD40 repeat-containing protein AN11 58 3e-08
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 57 4e-08
7295052 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 57 4e-08
At1g18830 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 57 5e-08
Hs8923881 [R] KOG0266 WD40 repeat-containing protein 57 6e-08
7303715 [BK] KOG1063 RNA polymerase II elongator complex subunit... 57 6e-08
YNL317w [A] KOG0284 Polyadenylation factor I complex subunit PFS2 56 8e-08
7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 56 8e-08
At5g27570 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 56 1e-07
YNL035c [R] KOG1188 WD40 repeat protein 55 1e-07
SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor an... 55 1e-07
Hs10092627 [A] KOG0268 Sof1-like rRNA processing protein (contai... 55 1e-07
At5g27080 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 55 1e-07
7294287 [A] KOG0268 Sof1-like rRNA processing protein (contains ... 55 1e-07
At5g26900 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 55 2e-07
Hs13129110 [A] KOG0284 Polyadenylation factor I complex subunit ... 54 3e-07
ECU03g1520 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 an... 54 4e-07
CE05083 [A] KOG0268 Sof1-like rRNA processing protein (contains ... 54 4e-07
At5g27940 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 54 4e-07
YCR084c [R] KOG0266 WD40 repeat-containing protein 54 5e-07
Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 54 5e-07
Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 53 7e-07
At5g24520 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 53 7e-07
YPL151c [A] KOG0285 Pleiotropic regulator 1 53 9e-07
YNL006w [R] KOG0315 G-protein beta subunit-like protein (contain... 53 9e-07
YLR196w [S] KOG0270 WD40 repeat-containing protein 53 9e-07
ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit ... 53 9e-07
7303990 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 53 9e-07
7303687 [K] KOG0263 Transcription initiation factor TFIID subuni... 53 9e-07
Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 52 1e-06
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 52 1e-06
CE24997 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 52 1e-06
Hs22043515 [S] KOG0295 WD40 repeat-containing protein 52 2e-06
CE03274 [A] KOG0640 mRNA cleavage stimulating factor complex; su... 52 2e-06
At3g26640 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 52 2e-06
Hs21071065 [K] KOG0263 Transcription initiation factor TFIID sub... 52 2e-06
At2g26060 [R] KOG0645 WD40 repeat protein 52 2e-06
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 51 3e-06
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 51 3e-06
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 51 3e-06
SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18... 51 3e-06
Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 51 3e-06
Hs18874090 [S] KOG0308 Conserved WD40 repeat-containing protein 51 3e-06
7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 51 3e-06
CE11748 [R] KOG0266 WD40 repeat-containing protein 51 4e-06
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 51 4e-06
7303631 [S] KOG0308 Conserved WD40 repeat-containing protein 51 4e-06
7290520 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and A... 51 4e-06
YDR128w [S] KOG0309 Conserved WD40 repeat-containing protein 50 5e-06
At1g20540 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily 50 5e-06
SPBC428.19c [S] KOG0310 Conserved WD40 repeat-containing protein 50 6e-06
At2g32700 [R] KOG0266 WD40 repeat-containing protein 50 6e-06
At1g12910 [S] KOG0290 Conserved WD40 repeat-containing protein AN11 50 6e-06
Hs7705377 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 50 8e-06
Hs21687048 [T] KOG0279 G protein beta subunit-like protein 50 8e-06
CE29560 [S] KOG0300 WD40 repeat-containing protein 50 8e-06
CE26861 [S] KOG0300 WD40 repeat-containing protein 50 8e-06
At4g11920 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 50 8e-06
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 50 8e-06
>YEL056w [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 401
Score = 437 bits (1124), Expect = e-122
Identities = 219/401 (54%), Positives = 290/401 (71%), Gaps = 13/401 (3%)
Query: 4 VEEPEQPTTINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQ 63
+E E+P +++EEYDLW SNVP+MYDFVSETRLTWPSLTVQWLPT +Q E+DG ++Q
Sbjct: 1 MENQEKPLSVDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQ--ELDGG-FIKQ 57
Query: 64 ELLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKE--NELSHRQSKIKIVRKFKH 121
EL+IGT T+ E NYLK A I+LP+ + S++ + +E + L +S I+I K++H
Sbjct: 58 ELIIGTHTSGEEENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEH 117
Query: 122 EQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTV 181
E+E+TRARYMPQ PNI+AT+NG G V+++ R+ G ++ +HK+NGY L+F+ V
Sbjct: 118 EEEITRARYMPQDPNIVATINGQGTVFLYSRS-----EGLQSTLKFHKDNGYALSFSTLV 172
Query: 182 SGQLLSASDDGTVALWDVTSTANKS-PSQTF-DVHTDIVNDCKWHEFQSSLFGTVSEDNT 239
G+LLS SDD TVALW+V S + + P +T+ D+H+DI+ND KWH F LFGTVSED+
Sbjct: 173 KGRLLSGSDDHTVALWEVGSGGDPTKPVRTWNDLHSDIINDNKWHNFNKDLFGTVSEDSL 232
Query: 240 LIIHDTNSDRA-IQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMA 298
L I+D ++ I + FNTLAFS S NLLAAAG DS VYLYDLR +++PLH M+
Sbjct: 233 LKINDVRANNTTIDTVKCPQPFNTLAFSHHSSNLLAAAGMDSYVYLYDLRNMKEPLHHMS 292
Query: 299 GHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGGHR 358
GHED+V +LEFS H DG++ SSGSD R++MWDL IGAEQ PDDA DGVPEL M+H GHR
Sbjct: 293 GHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQTPDDAEDGVPELIMVHAGHR 352
Query: 359 SPVNEFSHNSNVPWLMCSVEEENVLQIWKPANKIVRPPQPP 399
S VN+F N +PWL+ S EEEN+LQ+WK ++ + PP
Sbjct: 353 SSVNDFDLNPQIPWLVASAEEENILQVWKCSHSLPIVGGPP 393
>Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 306 bits (784), Expect = 4e-83
Identities = 166/415 (40%), Positives = 234/415 (56%), Gaps = 20/415 (4%)
Query: 5 EEPEQPTTINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQE 64
++ + INEEY +W N P +YD V L WPSLT QWLP +P +G+
Sbjct: 9 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRP---EGKDFSIHR 65
Query: 65 LLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKEN--ELSHRQSKIKIVRKFKHE 122
L++GT T+D E N+L IA++ LP + S D K KI+I K HE
Sbjct: 66 LVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHE 124
Query: 123 QEVTRARYMPQSPNIIATLNGAGIVYIFD--RNIKEKDHGAIAS----FSYHKENGYGLA 176
EV RARYMPQ+P IIAT + V +FD ++ + D + H++ GYGL+
Sbjct: 125 GEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLS 184
Query: 177 FNPTVSGQLLSASDDGTVALWDVTSTANKSP----SQTFDVHTDIVNDCKWHEFQSSLFG 232
+NP +SG LLSASDD T+ LWD+++ + F HT +V D WH SLFG
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 233 TVSEDNTLIIHDTNSDRAIQKLSVSSAF----NTLAFSKRSENLLAAAGTDSNVYLYDLR 288
+V++D L+I DT S+ + A N L+F+ SE +LA D V L+DLR
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 304
Query: 289 RLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVP 348
L+ LHS H+D + +++SPH + +L SSG+DRR+ +WDL IG EQ P+DA DG P
Sbjct: 305 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPP 364
Query: 349 ELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPANKIVRPPQPPADFD 403
EL +HGGH + +++FS N N PW++CSV E+N++Q+W+ A I P D
Sbjct: 365 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVD 419
>SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 298 bits (763), Expect = 1e-80
Identities = 170/403 (42%), Positives = 232/403 (57%), Gaps = 33/403 (8%)
Query: 12 TINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLT 71
TI EEY LW NVP +YD V L WPSLT+QWLP + + + G Q L++GT T
Sbjct: 25 TIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPDK---KTIPGTDYSIQRLILGTHT 81
Query: 72 TDNEPNYLKIAAIDLP---ENVTSSKPSVSDDAKENELSHRQSKIKIVRKFKHEQEVTRA 128
+ N+ NYL+IA++ LP E+ T PS A+ I+I +K H+ +V RA
Sbjct: 82 SGNDQNYLQIASVQLPNFDEDTTEFTPSTIRRAQATG----SYTIEISQKIPHDGDVNRA 137
Query: 129 RYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAI--------ASFSYHKENGYGLAFNPT 180
RYMPQ P IIAT+ G YIFD H A+ A H G+GL +NP
Sbjct: 138 RYMPQKPEIIATMGEGGNAYIFDTTC----HDALTTGEALPQAVLKGHTAEGFGLCWNPN 193
Query: 181 VSGQLLSASDDGTVALWDV-----TSTANK--SPSQTFDVHTDIVNDCKWHEFQSSLFGT 233
+ G L + ++D + LWDV TS+ K SP + HTDIVND ++H +L +
Sbjct: 194 LPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQHEALLAS 253
Query: 234 VSEDNTLIIHDT--NSDRAIQKL--SVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRR 289
VS+D TL IHDT N + K+ + S A N +A + ++ LLA A D V L+DLR
Sbjct: 254 VSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLRN 313
Query: 290 LQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPE 349
+ LH++ GHED V LE+SPH + +L SS +DRR+ +WDL IG EQ P+DA DG PE
Sbjct: 314 PYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPE 373
Query: 350 LFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPANKI 392
L MHGGH + ++EFS N W++ S+ ++N+LQIW P+ I
Sbjct: 374 LLFMHGGHTNRISEFSWCPNERWVVGSLADDNILQIWSPSRVI 416
>7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 295 bits (755), Expect = 8e-80
Identities = 161/410 (39%), Positives = 229/410 (55%), Gaps = 20/410 (4%)
Query: 5 EEPEQPTTINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQE 64
++ + INEEY +W N P +YD V L WPSLT QWLP + DG+
Sbjct: 13 DDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQ---DGKDYSVHR 69
Query: 65 LLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKEN--ELSHRQSKIKIVRKFKHE 122
L++GT T+D E N+L IA++ LP S D+ K KI+I K HE
Sbjct: 70 LILGTHTSD-EQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHE 128
Query: 123 QEVTRARYMPQSPNIIATLNGAGIVYIFDRN---IKEKDHGAIAS---FSYHKENGYGLA 176
EV RARYMPQ+ +IAT + V +FD K + G H++ GYGL+
Sbjct: 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLS 188
Query: 177 FNPTVSGQLLSASDDGTVALWDVTSTANK----SPSQTFDVHTDIVNDCKWHEFQSSLFG 232
+NP ++G LLSASDD T+ LWD+ +T + F HT +V D WH SLFG
Sbjct: 189 WNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFG 248
Query: 233 TVSEDNTLIIHDTNSDRAIQKLSVSSAF----NTLAFSKRSENLLAAAGTDSNVYLYDLR 288
+V++D L+I DT ++ + A N L+F+ SE +LA D V L+DLR
Sbjct: 249 SVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 308
Query: 289 RLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVP 348
L+ LHS H+D + +++SPH + +L SSG+DRR+ +WDL IG EQ +DA DG P
Sbjct: 309 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPP 368
Query: 349 ELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPANKIVRPPQP 398
EL +HGGH + +++FS N N PW++CSV E+N++Q+W+ A + +P
Sbjct: 369 ELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEP 418
>Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 294 bits (753), Expect = 1e-79
Identities = 165/420 (39%), Positives = 236/420 (55%), Gaps = 24/420 (5%)
Query: 5 EEPEQPTTINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQE 64
E+ + INEEY +W N P +YD V L WPSLTVQWLP +P +G+
Sbjct: 8 EDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKP---EGKDYALHW 64
Query: 65 LLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSV--SDDAKENELSHRQSKIKIVRKFKHE 122
L++GT T+D E N+L +A + +P + S SD + KI+ K HE
Sbjct: 65 LVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHE 123
Query: 123 QEVTRARYMPQSPNIIATLNGAGIVYIFD--RNIKEKDHGAIAS----FSYHKENGYGLA 176
EV RARYMPQ+P+IIAT + V +FD ++ + D + H++ GYGL+
Sbjct: 124 GEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLS 183
Query: 177 FNPTVSGQLLSASDDGTVALWDVTSTANKSP----SQTFDVHTDIVNDCKWHEFQSSLFG 232
+N +SG LLSASDD TV LWD+ + + F H+ +V D WH SLFG
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 233 TVSEDNTLIIHDTNSDRAIQKLSVSSAF----NTLAFSKRSENLLAAAGTDSNVYLYDLR 288
+V++D L+I DT S+ + + A N L+F+ SE +LA D V L+DLR
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
Query: 289 RLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVP 348
L+ LH+ H+D + + +SPH + +L SSG+DRR+ +WDL IG EQ +DA DG P
Sbjct: 304 NLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPP 363
Query: 349 ELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPANKIVRPPQPPADFDITTLE 408
EL +HGGH + +++FS N N PW++CSV E+N++QIW+ A I + D+TT E
Sbjct: 364 ELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEES----DVTTSE 419
>CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 417
Score = 278 bits (711), Expect = 1e-74
Identities = 154/402 (38%), Positives = 217/402 (53%), Gaps = 19/402 (4%)
Query: 14 NEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTTD 73
N+EY +W N P +YD V L WPSL+VQWLP + D L++GT T+D
Sbjct: 15 NDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAK----DNSDHTIHRLILGTHTSD 70
Query: 74 NEPNYLKIAAIDLPENVTSSKPSVSDDAKENE--LSHRQSKIKIVRKFKHEQEVTRARYM 131
E N+L I+ I +P + S D + K++ + HE EV RARYM
Sbjct: 71 -EQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYM 129
Query: 132 PQSPNIIATLNGAGIVYIFD-----RNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLL 186
PQ NIIAT + VYIFD ++ + H + GYGL++NP G +L
Sbjct: 130 PQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLIL 189
Query: 187 SASDDGTVALWDVTSTANKS----PSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLII 242
SASDD TV WD+ + N + F H +V D WH +FG+V +D L+I
Sbjct: 190 SASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLI 249
Query: 243 HDTNSDRAIQKLSVSSA-FNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHE 301
D + + SA N LAF+ SE +LA D V L+DLR L+ LHS H
Sbjct: 250 WDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHR 309
Query: 302 DSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGGHRSPV 361
D + +++SPH + +L SSG+D+R+ +WDL IG +Q +DA DG PEL +HGGH + +
Sbjct: 310 DEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKI 369
Query: 362 NEFSHNSNVPWLMCSVEEENVLQIWKPANKIVR--PPQPPAD 401
++FS N N PW++CSV E+N+LQ+W+ A+ I + PAD
Sbjct: 370 SDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPAD 411
>At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 275 bits (702), Expect = 1e-73
Identities = 158/405 (39%), Positives = 224/405 (55%), Gaps = 22/405 (5%)
Query: 3 EVEEPEQPTTINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLR 62
E+EE INEEY +W N P +YD V L WPSLTV+WLP +P G+
Sbjct: 11 EIEE----RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEP---SGKDYSV 63
Query: 63 QELLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKEN--ELSHRQSKIKIVRKFK 120
Q++++GT T+++EPNYL +A + LP + T S+ DD + K++I+++
Sbjct: 64 QKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQIN 123
Query: 121 HEQEVTRARYMPQSPNIIATLNGAGIVYIFDRN---IKEKDHGAI---ASFSYHKENGYG 174
H+ EV RARYMPQ+P IIAT VY+FD + K GA H GYG
Sbjct: 124 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYG 183
Query: 175 LAFNPTVSGQLLSASDDGTVALWDVTSTA-NKS--PSQTFDVHTDIVNDCKWHEFQSSLF 231
L+++ G LLS SDD + LWD+ +T NKS Q F H +V D WH LF
Sbjct: 184 LSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLF 243
Query: 232 GTVSEDNTLIIHDTNSDRAIQKLSV----SSAFNTLAFSKRSENLLAAAGTDSNVYLYDL 287
G+V +D L+I D S A + + S N LAF+ +E ++A TD V L+DL
Sbjct: 244 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 303
Query: 288 RRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGV 347
R+L LH+ H++ V + ++P + +L S RR+++WDL I EQ +DA DG
Sbjct: 304 RKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGP 363
Query: 348 PELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPANKI 392
PEL +HGGH S +++FS N W++ SV E+N+LQIW+ A I
Sbjct: 364 PELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408
>At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 415
Score = 248 bits (632), Expect = 2e-65
Identities = 140/410 (34%), Positives = 223/410 (54%), Gaps = 28/410 (6%)
Query: 13 INEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTT 72
+ E++ +W N P +YD + L WPSLTV W+P+ P D + + L++GT T+
Sbjct: 14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHK-LILGTHTS 72
Query: 73 DNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFKHEQEVTRARYMP 132
+ ++L +A + P +++P + ++ + K++I ++ + + EV RAR MP
Sbjct: 73 GSAQDFLMVADVVTP--TPNAEPGIGGANQDPFIP----KVEIRQRIRVDGEVNRARCMP 126
Query: 133 QSPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSY---------HKENGYGLAFNPTVSG 183
Q P ++ V++FD H A + S H + GYGL+++P G
Sbjct: 127 QKPTLVGAKTSGCEVFLFDY----AKHAAKSQTSECDPDLRLVGHDKEGYGLSWSPFKEG 182
Query: 184 QLLSASDDGTVALWDVTSTANKSPSQT---FDVHTDIVNDCKWHEFQSSLFGTVSEDNTL 240
LLS S D + LWDV++T ++ H + D WH +LFG+ ED L
Sbjct: 183 YLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRL 242
Query: 241 IIHDTNSDRAIQKLSVSSA-FNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAG 299
+I DT +++ ++ V N L+F+ +E +LA A +DS V L+DLR+L PLH M+
Sbjct: 243 VIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSS 302
Query: 300 HEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPD--DAYDGVPELFMMHGGH 357
HE V +E+ P+ + +L SSG DRR+++WDL +G EQ DA DG PEL HGGH
Sbjct: 303 HEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGH 362
Query: 358 RSPVNEFSHNSNVPWLMCSVEEENVLQIWKPANKIVRPPQPPADF--DIT 405
++ +++F+ N N PW++ SV E+N LQ+W+ A I R + D DIT
Sbjct: 363 KAKISDFAWNKNEPWVIASVAEDNSLQVWQMAESIYRDEEDAEDIKEDIT 412
>At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 245 bits (626), Expect = 8e-65
Identities = 135/402 (33%), Positives = 221/402 (54%), Gaps = 18/402 (4%)
Query: 13 INEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTT 72
+ EE+ +W N P +YD + L WPSLT+ W+P+ P D + + L++GT T+
Sbjct: 15 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHK-LILGTHTS 73
Query: 73 DNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFKHEQEVTRARYMP 132
++L +A + +P ++P + +E + K++I +K + + EV RAR MP
Sbjct: 74 GGAQDFLMVADVVIP--TPDAEPGLGGRDQEPIVP----KVEIKQKIRVDGEVNRARCMP 127
Query: 133 QSPNIIATLNGAGIVYIFD-RNIKEKDHGAIAS----FSYHKENGYGLAFNPTVSGQLLS 187
Q P ++ V++FD + K + H++ GYGLA++ G LLS
Sbjct: 128 QKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSFKEGYLLS 187
Query: 188 ASDDGTVALWDVTSTANK---SPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHD 244
S D + LWDV++TA +P ++ H I+ D WH ++FG+ +D L+I D
Sbjct: 188 GSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWD 247
Query: 245 TNSDRAIQKLSVSSA-FNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDS 303
+++ ++ V N L+F+ +E +LA A +DS V L+DLR+L PLH ++ HE
Sbjct: 248 LRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGE 307
Query: 304 VTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPD--DAYDGVPELFMMHGGHRSPV 361
V +E+ P+ + +L SSG DRR+++WD+ +G EQ DA DG PEL HGGH++ +
Sbjct: 308 VFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKI 367
Query: 362 NEFSHNSNVPWLMCSVEEENVLQIWKPANKIVRPPQPPADFD 403
++F+ N + PW++ SV E+N LQ+W+ A I R D D
Sbjct: 368 SDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDD 409
>ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 384
Score = 221 bits (563), Expect = 2e-57
Identities = 124/382 (32%), Positives = 196/382 (50%), Gaps = 20/382 (5%)
Query: 13 INEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTT 72
+NEEY +W NVP +YD + L WPSL+VQW P + E Q LL+ T T+
Sbjct: 11 VNEEYKIWKKNVPYLYDLMFSHTLEWPSLSVQWFPDVRRDEEAGRTT---QRLLLSTHTS 67
Query: 73 DNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFKHEQEVTRARYMP 132
+E Y+ IA ++ P+ D NE ++KI+++ E R RY P
Sbjct: 68 GSEEEYILIAKVEFPDEF---------DESLNEEVGGDMRLKIIQRISIMDEANRVRYNP 118
Query: 133 QSPNIIATLNGAGIVYIFDRNIKEKDHGAIAS----FSYHKENGYGLAFNPTVSGQLLSA 188
+ N++A + ++++D K H I H G+GL++N G+L
Sbjct: 119 SACNVLAVRSDLPDIHVYDYT-KHLSHEKIPRPDMVLRGHSAGGFGLSWNHLNPGELAGC 177
Query: 189 SDDGTVALWDVTSTANK-SPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNS 247
+ G V ++DV+ ++ SP+ H VNDC + F L + + +++ DT S
Sbjct: 178 GEGGEVCVFDVSQESSSISPTVVLRRHETAVNDCAFSFFDKKLLSSAGDGGMVVLWDTRS 237
Query: 248 DRAIQKLSVSSAFNTLA--FSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVT 305
+ I + + + L+ FS N++A + D +V ++D R L +PLH + GH V
Sbjct: 238 EDCIHAIEEAHTSDILSVRFSPLDGNVIATSSCDGSVKVWDRRSLSQPLHILLGHSKDVV 297
Query: 306 SLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGGHRSPVNEFS 365
S+E+SPH D +L S +DRR+I+WDL GAE + +G PE+ +HGGH S V + S
Sbjct: 298 SVEWSPHNDKVLASGSTDRRVIVWDLGQAGAEVPEEYKAEGPPEMKFLHGGHTSTVCDIS 357
Query: 366 HNSNVPWLMCSVEEENVLQIWK 387
N P+ + SV E+N+LQIW+
Sbjct: 358 WNPAEPFEIASVSEDNILQIWQ 379
>CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 412
Score = 216 bits (551), Expect = 4e-56
Identities = 132/415 (31%), Positives = 205/415 (48%), Gaps = 35/415 (8%)
Query: 1 MTEVEEPEQPTTINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQL 60
M+E E E+ + +E+ +W NVP +YD V + WPSL+VQW+P + D
Sbjct: 1 MSEAESCEETS---KEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSM- 56
Query: 61 LRQELLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSH-------RQSKI 113
++ GT T N+L I+ +T+ P D ++E +K
Sbjct: 57 --HRMIHGTHTCGGVQNHLMISKF----TITTDTPEFDDAKWDSEREEFGGYGEGSAAKW 110
Query: 114 KIVRKFKHEQEVTRARYMPQSPNIIATLNGAGIVYIFD-----RNIKEKDHGAIASFSYH 168
K H EV RARYMP +P IIA+ + VYIFD K+ H
Sbjct: 111 DTEIKINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGH 170
Query: 169 KENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKS----PSQTFDVHTDIVNDCKWH 224
+ GYG++++ T G LL+A DDG + WD+ + S P F H+ D +H
Sbjct: 171 EGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFH 230
Query: 225 EFQSSLFGTVSEDNTLIIHDTNSDRA-IQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVY 283
+ +FG+V +D L + D + + + ++ N + F+ SE +LA D V
Sbjct: 231 ALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVA 290
Query: 284 LYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDD- 342
L+D+R ++K ++++ H D + + FSPH + +L SSGSD R+I+WD+ I Q P
Sbjct: 291 LWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKI---QDPSSS 347
Query: 343 ---AYDGV-PELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPANKIV 393
+ D V PE+ +H GH V +FS N N PW +CS +E N LQ+W+ +N +V
Sbjct: 348 SAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSLV 402
>SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 431
Score = 213 bits (543), Expect = 3e-55
Identities = 127/401 (31%), Positives = 198/401 (48%), Gaps = 23/401 (5%)
Query: 9 QPTTINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIG 68
Q INEEY +W N P +YD + L WP +++QW P + E Q++ +G
Sbjct: 22 QEKCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPEQQIFAE---HGYTEQKMFLG 78
Query: 69 TLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFKHEQEVTRA 128
+ D L +A+I LP + P+ + A + S ++ I + H + V A
Sbjct: 79 -VRADVGKYLLAVASIQLPYLNQTVPPTTMEGASAGDES--SLRVNISNLYSHPESVCSA 135
Query: 129 RYMPQSPNIIATL-NGAGIVYIFDRNIKEKDHGAIAS-------FSYHKENGYGLAFNPT 180
+ MPQ + +AT+ N V +FD+ E A S + H + + +N
Sbjct: 136 KLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQPCTSVCWNFL 195
Query: 181 VSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDI----VNDCKWHEFQSSLFGTVSE 236
G L+S S D T++ WD+ + + VH V+D ++H L +VS
Sbjct: 196 SKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLLASVSY 255
Query: 237 DNTLIIHDTNSDRAIQKLSVS-----SAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQ 291
D L +HD A K + S +++AF+ ++ +LA TD + L+DLR L
Sbjct: 256 DQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLN 315
Query: 292 KPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELF 351
+ LH++ GHED VT + FSPH++ +L S+ +DRR ++WDL IG +Q ++A DG PEL
Sbjct: 316 QRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQDGPPELL 375
Query: 352 MMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPANKI 392
MHGGH S + N W M + E+N+LQIW P+ I
Sbjct: 376 FMHGGHTSCTIDMDWCPNYNWTMATAAEDNILQIWTPSRSI 416
>Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 345
Score = 211 bits (536), Expect = 2e-54
Identities = 118/304 (38%), Positives = 167/304 (54%), Gaps = 14/304 (4%)
Query: 113 IKIVRKFKHEQEVTRARYMPQSPNIIATLNGAGIVYIFDRN---IKEKDHGAI---ASFS 166
I+I K HE EV RARYMPQ+ II T + V +FD K G
Sbjct: 30 IEIEIKINHEGEVNRARYMPQNSCIIKTKTPSSDVLVFDYTKYPSKPDPSGECNPDLRLC 89
Query: 167 YHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQT---FDVHTDIVNDCKW 223
H++ GYGL++NP +SG LLSASDD TV LWD+++ + F HT +V D W
Sbjct: 90 GHQKEGYGLSWNPNLSGHLLSASDDHTVCLWDISAIPKEGKVDARTIFTGHTAVVEDVFW 149
Query: 224 HEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAF----NTLAFSKRSENLLAAAGTD 279
+ SLF V++D L+I DT S + A+ N L+F+ E +LA D
Sbjct: 150 NLLHESLFRLVADDQKLMIWDTRSKNTSKPSHSVDAYTAEVNCLSFNPYGEFILATGSAD 209
Query: 280 SNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQ 339
V L+DLR L+ +HS H+D + +++SPH + +L SSG+D + +WDL I EQ
Sbjct: 210 KTVALWDLRNLKLKVHSFESHKDEIFQVQWSPHNETILASSGTDHGLNVWDLSKITEEQS 269
Query: 340 PDDAYDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPANKIVRPPQPP 399
P+DA D PELF +HGGH + + +FS N + PW++CSV E N++++W+ A I P
Sbjct: 270 PEDAEDRPPELF-IHGGHTAKIPDFSLNPSEPWMICSVSENNIMEVWQMAENISNGEDPE 328
Query: 400 ADFD 403
D
Sbjct: 329 GSVD 332
>Hs17463450 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 396
Score = 201 bits (511), Expect = 2e-51
Identities = 133/408 (32%), Positives = 196/408 (47%), Gaps = 35/408 (8%)
Query: 5 EEPEQPTTINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQE 64
++ + INEEY W N P +YD V L WPSLT QWLP +P +G+ +
Sbjct: 9 DDAVEERVINEEYKKWKKNTPFLYDLVLTHALEWPSLTAQWLPDVTRP---EGKDFSIHQ 65
Query: 65 LLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKEN--ELSHRQSKIKIVRKFKHE 122
L++GT T D E N+L IA++ LP + T S + K + KI+I HE
Sbjct: 66 LVLGTCTLD-EQNHLVIASVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEININHE 124
Query: 123 QEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVS 182
EV + L + I +I+ K G + G ++ +
Sbjct: 125 GEVNKI------------LLESAIQTCVSVDIRRKAMGFL---------GTQISVGTYLV 163
Query: 183 GQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLII 242
Q+ + + GT L F HT +V D WH SLFG+V++D L+I
Sbjct: 164 LQMTTPAACGTAVLSQRREKV-VDVKIIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMI 222
Query: 243 HDTNSDRAIQ---KLSVSSAFNTLA----FSKRSENLLAAAGTDSNVYLYDLRRLQKPLH 295
DT S+ A + + +A TL F E +LA D V L DLR L+ LH
Sbjct: 223 WDTCSNSASKPSHSVDAHTAEVTLTLLPLFQSLYEFILATGSADKTVALRDLRNLKLKLH 282
Query: 296 SMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHG 355
S +D + +++SPH + +L SSG++ R+ +WDL IG +Q P+D D PEL +HG
Sbjct: 283 SFELLKDKIFQVQWSPHNETILASSGTNHRLNVWDLSKIGEKQSPEDKKDRPPELLFIHG 342
Query: 356 GHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPANKIVRPPQPPADFD 403
GH + + +FS N N PW++CSV E+N++Q+W+ A I P D
Sbjct: 343 GHTAKIPDFSGNPNEPWVICSVPEDNIMQVWQMAENIYNNEDPEGSVD 390
>SPAC25H1.06 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 408
Score = 152 bits (385), Expect = 7e-37
Identities = 112/405 (27%), Positives = 193/405 (47%), Gaps = 50/405 (12%)
Query: 13 INEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTT 72
I+E++ W N +Y+ + LTWPSL++QWL + + +L+ LL+GT
Sbjct: 20 ISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAM---ESITEKAVLKNRLLLGTHAA 76
Query: 73 DNEPNYLKIAAIDLPE-NVTSSKPSVSDDAKENELS----HRQSKIKIVRKFKHEQEVTR 127
+ PN+L++A +DLP+ N T P + EL K +I ++ H +V R
Sbjct: 77 EGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNR 136
Query: 128 ARYMPQSPNIIATLNGAGIVYIFDR----NIKEKDHGAIASFSYHKENGYGLAFNPTVSG 183
R+MPQ+PNIIAT++ G YIFDR ++ ++ S HK+ G+GL++N +
Sbjct: 137 VRHMPQNPNIIATMSSCGNAYIFDRTKYTSMPAEEFLPNISLIGHKKEGFGLSWNRQQNC 196
Query: 184 QLLSASDDGTVALWDVTS----TANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNT 239
+L++A++D + WD+ + T +P + F VND ++H ++L+ V+++
Sbjct: 197 RLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEYHPHHTNLYIAVNDNGI 256
Query: 240 LIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENL--LAAAGTDSNVYLYDLRRLQKPLHSM 297
I D + K A N L + + ++ L A G++ ++ L+DLR L K + +
Sbjct: 257 AFICDNRLQQTCSK--TVKASNPLFSVRHNPSIATLFALGSEQDLQLWDLRNLNKSVFNT 314
Query: 298 AGHED--------------SVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDA 343
+ ED TSL +S G + S+ +W+
Sbjct: 315 S--EDLSDNRLKVPSRLTLGGTSLSWSWRHSGRIVSA-CQEYCYVWN------------- 358
Query: 344 YDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKP 388
++ L +H GH+ VNE + + SV ++N L IWKP
Sbjct: 359 FNKANPLEFVHAGHKGTVNEVDFDPFEAQCIASVADDNELHIWKP 403
>YBR195c [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 422
Score = 149 bits (377), Expect = 6e-36
Identities = 116/428 (27%), Positives = 193/428 (44%), Gaps = 68/428 (15%)
Query: 10 PTTINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLP----TEMQPREV-----DGQQL 60
P + E Y W N ++YD+++ WPSLT Q+ P T + R + Q+
Sbjct: 16 PIDLQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDEHRILLSSFTSSQKP 75
Query: 61 LRQELLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFK 120
+ + I ++T + + D+ E + S +K H + I I F
Sbjct: 76 EDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSK-----HLVNDISI---FF 127
Query: 121 HEQEVTRARYMPQSPNIIATLNGAGIVYIFDRN------IKEK------------DHGAI 162
E RARY+PQ+P+IIA + G +YIFDR I++ HG I
Sbjct: 128 PNGECNRARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVI 187
Query: 163 ASF------SYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPS---QTFDV 213
S LA+N LLS+ +G V +WD+ ++++P +
Sbjct: 188 QDVEAMDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSI 247
Query: 214 HTD--IVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVS-----SAFNTLAFS 266
++D VND W SLF +E N + + D + + +KL + N+ F+
Sbjct: 248 NSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKK--EKLQSNREKHDGGVNSCRFN 305
Query: 267 KRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRI 326
++ +LA+A ++ + L+D+R + K + H SV++LE+SP+ D +L ++G + +
Sbjct: 306 YKNSLILASADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVLATAGQEDGL 365
Query: 327 I-MWDLFNIGAEQQPDDAYDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQI 385
+ +WD E HGGH VN+ S +++ PWLMCSV +N + I
Sbjct: 366 VKLWDT--------------SCEETIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHI 411
Query: 386 WKPANKIV 393
WKPA +V
Sbjct: 412 WKPAGNLV 419
>At2g19520 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 507
Score = 144 bits (364), Expect = 2e-34
Identities = 117/448 (26%), Positives = 202/448 (44%), Gaps = 71/448 (15%)
Query: 5 EEPEQPTTINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQE 64
++ +Q +++E+Y W VP++YD+++ L WPSL+ +W P Q + RQ
Sbjct: 56 KKTQQSPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKN-----RQR 110
Query: 65 LLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFK---H 121
L + T + PN L IA N KP V+ A+ + +++ V+K+K H
Sbjct: 111 LYLSEQTDGSVPNTLVIA------NCEVVKPRVA-AAEHISQFNEEARSPFVKKYKTIIH 163
Query: 122 EQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIAS--------FSYHKENG- 172
EV R R +PQ+ I+AT + V I+D + H + + + H++N
Sbjct: 164 PGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAE 223
Query: 173 YGLAFNPTVSGQLLSASDDGTVALWDV------TSTANKS-------------------- 206
+ LA PT +LS D +V LW + T +KS
Sbjct: 224 FALAMCPT-EPFVLSGGKDKSVVLWSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTV 282
Query: 207 -PSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHD----TNSDRAIQKLSVSSAFN 261
P + H D V D + + F +V +D+ LI+ D TN ++K + + +
Sbjct: 283 GPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEK-AHDADLH 341
Query: 262 TLAFSKRSENLLAAAGTDSNVYLYDLRRLQ-----KPLHSMAGHEDSVTSLEFSPHQDGL 316
+ ++ +NL+ D+ V L+D R+L P++ GH+ +V +++SP + +
Sbjct: 342 CVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSV 401
Query: 317 LTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCS 376
SS D + +WD + ++ D A LF H GHR V +F N++ PW + S
Sbjct: 402 FGSSAEDGLLNIWDYDRV--SKKSDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVS 459
Query: 377 VEEE-------NVLQIWKPANKIVRPPQ 397
V ++ LQIW+ ++ I RP +
Sbjct: 460 VSDDCETTGGGGTLQIWRMSDLIYRPEE 487
>Hs13631383 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 262
Score = 142 bits (357), Expect = 1e-33
Identities = 94/255 (36%), Positives = 135/255 (52%), Gaps = 20/255 (7%)
Query: 36 LTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTTDNEPNYLKIAAIDLPENVTSSKP 95
L WPSLTVQWLP +P +G+ L++GT T+D E N+L +A + +P +
Sbjct: 5 LQWPSLTVQWLPEVTKP---EGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDA 60
Query: 96 SV--SDDAKENELSHRQSKIKIVRKFKHEQEVTRARYMPQSPNIIATLNGAGIVYIFD-- 151
S SD + KI+ K HE EV RARYMPQ+P+IIAT + V +FD
Sbjct: 61 SHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYT 120
Query: 152 RNIKEKDHGAIAS----FSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANK-- 205
++ + D + H++ GYGL++N +SG LLSASDD TV LWD+ + +
Sbjct: 121 KHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGK 180
Query: 206 --SPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSA---- 259
F H+ +V D WH SLFG+V++D L+I DT S+ + + A
Sbjct: 181 IVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAE 240
Query: 260 FNTLAFSKRSENLLA 274
N L+F+ SE +LA
Sbjct: 241 VNCLSFNPYSEFILA 255
>Hs20551282 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 356
Score = 129 bits (324), Expect = 8e-30
Identities = 57/137 (41%), Positives = 84/137 (60%)
Query: 267 KRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRI 326
++ E +LA D V L DLR L+ LHS H+D + ++SPH + +L SSG++ R+
Sbjct: 214 EKCEFILATGSADKTVALRDLRNLKLKLHSFELHKDKIFQFQWSPHNETILASSGTNHRL 273
Query: 327 IMWDLFNIGAEQQPDDAYDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIW 386
+WDL IG +Q P+D DG PEL +HGGH + + +FS N N PW++CSV E+N++Q+W
Sbjct: 274 NVWDLSKIGEKQSPEDKEDGPPELLFIHGGHTAKIPDFSWNPNEPWVICSVPEDNIMQVW 333
Query: 387 KPANKIVRPPQPPADFD 403
+ A I P D
Sbjct: 334 QMAENIYNDEYPEGSVD 350
Score = 123 bits (309), Expect = 4e-28
Identities = 102/369 (27%), Positives = 169/369 (45%), Gaps = 55/369 (14%)
Query: 5 EEPEQPTTINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQE 64
++ + INEEY W N P +YD V + WPSLT QWLP ++P +G+ +
Sbjct: 9 DDTVEERVINEEYKKWKKNTPFLYDLVLTHAVEWPSLTAQWLPDVIRP---EGKDFSIHQ 65
Query: 65 LLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKEN--ELSHRQSKIKIVRKFKHE 122
L++GT T D E N+L I ++ LP + T S + K + KI+I K HE
Sbjct: 66 LVLGTYTLD-EQNHLVITSVQLPNDDTQFDASHYNTEKGEFGGFYSVRGKIEIEIKINHE 124
Query: 123 QEVTRARYMPQSPNIIATLNGAGIVYIFD--RNIKEKDHGAIAS----FSYHKENGYGLA 176
EV + RYMPQ+ II+T + V +FD ++ ++D H++ GYGL+
Sbjct: 125 GEVNKVRYMPQNSCIISTKTPSSDVLVFDYTKHPSKQDPSGECDPDLCLRGHQKEGYGLS 184
Query: 177 FNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSE 236
+NP + G LLSA +T+ A S F C++ + T S
Sbjct: 185 WNPNLCGHLLSAQ---------MTTPAACGTSVLFQRR----EKCEF------ILATGSA 225
Query: 237 DNTLIIHDTNSDRAIQKLSVSS------AFNTLAFSKRSENLLAAAGTDSNVYLYDLRRL 290
D T+ + D + KL + S +S +E +LA++GT+ + ++DL ++
Sbjct: 226 DKTVALRDLRN----LKLKLHSFELHKDKIFQFQWSPHNETILASSGTNHRLNVWDLSKI 281
Query: 291 ---QKP----------LHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLF-NIGA 336
Q P L GH + ++P++ ++ S D + +W + NI
Sbjct: 282 GEKQSPEDKEDGPPELLFIHGGHTAKIPDFSWNPNEPWVICSVPEDNIMQVWQMAENIYN 341
Query: 337 EQQPDDAYD 345
++ P+ + D
Sbjct: 342 DEYPEGSVD 350
>At4g29730 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 496
Score = 121 bits (304), Expect = 2e-27
Identities = 109/445 (24%), Positives = 188/445 (41%), Gaps = 72/445 (16%)
Query: 6 EPEQPTTINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQEL 65
+ Q T+++ Y W + +P++YD L WPSL+ +W P +++ Q L
Sbjct: 47 QQSQKATVDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGP------QLEQAGSKTQRL 100
Query: 66 LIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFK---HE 122
+ T + PN L IA E V S S NE +H V+K+K H
Sbjct: 101 YLSEQTNGSVPNTLVIANC---ETVNRQVISFSLPKLLNEKAHS----PFVKKYKTIIHP 153
Query: 123 QEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIAS---------FSYHKENGY 173
EV R R +PQ+ I+AT + + I++ + + + + + + +
Sbjct: 154 GEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEF 213
Query: 174 GLAFNPTVSGQLLSASDDGTVALWDV------TSTANKSPSQTF---------------- 211
LA PT +LS D +V LW++ + +KSP +F
Sbjct: 214 ALAMCPT-EPFVLSGGKDKSVILWNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVG 272
Query: 212 -----DVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHD--TNSDRAIQKLSVSSA-FNTL 263
+ H D V D + + F +V +D+ L++ D T + A++ A + +
Sbjct: 273 PRGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCV 332
Query: 264 AFSKRSENLLAAAGTDSNVYLYDLRRLQ-----KPLHSMAGHEDSVTSLEFSPHQDGLLT 318
++ NL+ D+ V ++D R L P++ GH +V +++SP + +
Sbjct: 333 DWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFG 392
Query: 319 SSGSDRRIIMWDLFNIGAE-QQPDDAYDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCSV 377
SS D + +WD +G + ++ DG LF H GHR V +F + PW + SV
Sbjct: 393 SSAEDGLLNIWDCDRVGKKSERATKTPDG---LFFQHAGHRDKVVDFHWSLLNPWTIVSV 449
Query: 378 EEE-------NVLQIWKPANKIVRP 395
+ LQIW+ ++ I RP
Sbjct: 450 SDNCESIGGGGTLQIWRMSDLIYRP 474
>At2g19540 [R] KOG0302 Ribosome Assembly protein
Length = 469
Score = 97.1 bits (240), Expect = 4e-20
Identities = 82/348 (23%), Positives = 157/348 (44%), Gaps = 40/348 (11%)
Query: 88 ENVTSSKPSVSDDAKENELSHRQSKIKIVRKFKHEQEVTRARYMPQSPNIIATLNGAGIV 147
E+ S SDD +E S + I+ VR+ H V R R MPQ+ +I + +G V
Sbjct: 127 EDEDDEDDSDSDDDDGDEAS-KTPNIQ-VRRVAHHGCVNRIRAMPQNSHICVSWADSGHV 184
Query: 148 YIFDRN----------IKEKD-------HGAIASFSYHKENGYGLAFNPTVSGQLLSASD 190
++D + + KD + +FS HK+ GY + ++P +G+LLS
Sbjct: 185 QVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDC 244
Query: 191 DGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDR- 249
+ LW+ S + F HT V D +W + ++F + S D ++ + D +
Sbjct: 245 KSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKS 304
Query: 250 -AIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQ---KPLHSMAGHEDSVT 305
A+ + ++ N +++++ + +LA+ D + DLR ++ + H+ +T
Sbjct: 305 PALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPIT 364
Query: 306 SLEFSPHQDGLLTSSGSDRRIIMWDL-----------FNIGAEQQPDDAYDGVPELFMMH 354
S+E+S H+ L + D ++ +WDL FN ++ + D P+L +H
Sbjct: 365 SIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEEEAEFNAQTKELVNTPQDLPPQLLFVH 424
Query: 355 GGHRSPVNEFSHNSNVPWLMCSVEEE--NVLQIWKPANKIVRPPQPPA 400
G + + E ++ +P ++ S + N+L + N + P + PA
Sbjct: 425 QGQKD-LKELHWHNQIPGMIISTAGDGFNILMPYNIQNTL--PSELPA 469
>SPBC1711.07 [R] KOG0302 Ribosome Assembly protein
Length = 480
Score = 94.7 bits (234), Expect = 2e-19
Identities = 92/387 (23%), Positives = 174/387 (44%), Gaps = 46/387 (11%)
Query: 25 PMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTL----TTDNEPNYLK 80
P +Y+ + ++ WP L+ L + + Q L+G + DNE +K
Sbjct: 91 PSVYEMLHNIQVKWPFLSFDILQDSLGEER---RAWPHQMYLVGGSQALDSNDNELTVMK 147
Query: 81 IAAIDLPENVTSSKPSVSDDAKENE-LSHRQSKIKIVRKFKHEQEVTRARYMPQSP--NI 137
++ + ++ + S + D +E+ L H+ K V AR S ++
Sbjct: 148 LSQLYKTQHDENDDASDNSDVEEDPILEHKSISTKGACN-----RVRSARRPANSSKESL 202
Query: 138 IATLNGAGIVYIFDRN------------IKEKDHGAIASFSYHKENGYGLAFNPTVSGQL 185
+A+ + G V+I+D + K++ + + + HK GY L ++P L
Sbjct: 203 LASFHETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWSP-FEYSL 261
Query: 186 LSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDT 245
LS + + L ++ ++ S F HT V D +W + ++F + S D T I D
Sbjct: 262 LSGDNANEIFLTKYSNGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDV 321
Query: 246 NSDRAIQKLSVSSA----FNTLAFSKRSENLLAAAGTDSNVY-LYDLRRLQK------PL 294
+ + L+V++ N L+++ R NLLA G D+ V+ ++DLR L+ P+
Sbjct: 322 RNKQKTSALTVNAHPGVDVNVLSWNTRVPNLLAT-GADNGVWSVWDLRSLKSSSSVATPV 380
Query: 295 HSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL-FNIGAEQQPDDAYDGV----PE 349
S H + S+E+ P++D ++ G+D +I +WDL + E+Q A +G+ P+
Sbjct: 381 ASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSVELDEEEQDSRAAEGLQDVPPQ 440
Query: 350 LFMMHGGHRSPVNEFSHNSNVPWLMCS 376
L +H G + + E + +P + S
Sbjct: 441 LMFIHMGQQE-IKEMHWHRQIPGTIVS 466
>7302218 [R] KOG0302 Ribosome Assembly protein
Length = 422
Score = 81.6 bits (200), Expect = 2e-15
Identities = 58/245 (23%), Positives = 114/245 (45%), Gaps = 27/245 (11%)
Query: 152 RNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTAN-KSPSQT 210
+ ++ + + +F H++ G+ + ++P+ G L + + +W K +
Sbjct: 171 KQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVEDGTWKVDQRP 230
Query: 211 FDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSV-------SSAFNTL 263
H+ V D +W + S+ + S D T+ I D + QK + S N +
Sbjct: 231 LAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASP--QKACMLTCEDAHQSDVNVI 288
Query: 264 AFSKRSENLLAAAGTDSNVYLYDLRRLQ--KPLHSMAGHEDSVTSLEFSPHQDGLLTSSG 321
+++ R+E +A+ G D ++++DLR+ Q KP+ + H D +T++E+SP + +L S G
Sbjct: 289 SWN-RNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGG 347
Query: 322 SDRRIIMWDLFNIGAEQQPDDAYDGV----------PELFMMHGGHRSPVNEFSHNSNVP 371
D +I +WDL E+ D A D P+L +H G + + E + +P
Sbjct: 348 DDDQIALWDL---AVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQKE-IKELHWHPQLP 403
Query: 372 WLMCS 376
++ S
Sbjct: 404 GVLLS 408
>Hs13899346 [R] KOG0302 Ribosome Assembly protein
Length = 446
Score = 80.5 bits (197), Expect = 4e-15
Identities = 62/231 (26%), Positives = 112/231 (47%), Gaps = 21/231 (9%)
Query: 162 IASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQT-FDVHTDIVND 220
I SF+ H G+ L ++P V+G+LL+ + LW T + Q F HT V D
Sbjct: 207 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVED 266
Query: 221 CKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSA-----FNTLAFSKRSENLLAA 275
+W ++++F + S D ++ I D + + + ++ N +++S+R E L +
Sbjct: 267 LQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRR-EPFLLS 325
Query: 276 AGTDSNVYLYDLRRLQK--PLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFN 333
G D + ++DLR+ + P+ + H VTS+E+ P G+ +SG+D +I WDL
Sbjct: 326 GGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWDL-- 383
Query: 334 IGAEQQPD----DAYDGV----PELFMMHGGHRSPVNEFSHNSNVPWLMCS 376
E+ P+ +A G+ +L +H G + + E + P L+ S
Sbjct: 384 -AVERDPEAGDVEADPGLADLPQQLLFVHQG-ETELKELHWHPQCPGLLVS 432
>At1g29260 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 317
Score = 80.1 bits (196), Expect = 5e-15
Identities = 55/197 (27%), Positives = 91/197 (45%), Gaps = 7/197 (3%)
Query: 136 NIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVA 195
+++ G G V I+D + + I SF H + +NPT L++S D TV
Sbjct: 74 SVLIAAIGDGSVKIYDTALPPPSN-PIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVK 132
Query: 196 LWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLS 255
LW + A+ +TF H V W+ +F + S D TL I D + +
Sbjct: 133 LWAMDRPASV---RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP 189
Query: 256 VSSAFNTLA--FSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQ 313
F L+ ++K + +LA + D V ++D+R + PL + GH +V ++FSPH+
Sbjct: 190 AHD-FEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHR 248
Query: 314 DGLLTSSGSDRRIIMWD 330
L+ S D + +WD
Sbjct: 249 RSLIASCSYDMSVCLWD 265
>YMR131c [R] KOG0302 Ribosome Assembly protein
Length = 511
Score = 75.1 bits (183), Expect = 2e-13
Identities = 84/410 (20%), Positives = 170/410 (40%), Gaps = 64/410 (15%)
Query: 25 PMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTTDNEPNYLKIAAI 84
P +Y+ + + WP LT+ +P + + Q + L T ++ + N L + A+
Sbjct: 115 PTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYPQSIL--LTTATQSSRKKENELMVLAL 172
Query: 85 -DLPENVTSSKPSVSDDAKENE-------------LSHRQSKIKIVRKFKHEQEVTRARY 130
+L + + DD +++E L +++K+ QEV
Sbjct: 173 SNLAKTLLKDDNEGEDDEEDDEDDVDPVIENENIPLRDTTNRLKVSPFAISNQEV----- 227
Query: 131 MPQSPNIIATLNGAGIVYIFDRNIKEKDHGA------------IASFSYHKE-NGYGLAF 177
+ AT++ G VYI++ + K I + H GYGL +
Sbjct: 228 ------LTATMSENGDVYIYNLAPQSKAFSTPGYQIPKSAKRPIHTVKNHGNVEGYGLDW 281
Query: 178 NPTV-SGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTD-IVNDCKWHEFQSSLFGTVS 235
+P + +G LLS G + ++ + Q F V + + D +W +S++F T
Sbjct: 282 SPLIKTGALLSGDCSGQIYFTQRHTSRWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAG 341
Query: 236 EDNTLIIHDTNSDRAIQKLSVSSA---FNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQ- 291
D + I DT S + +SV ++ N +++S + LLA+ + ++DLR+
Sbjct: 342 CDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQFTP 401
Query: 292 ------KPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQ------- 338
+P+ H+ ++TS+ F+P + ++ D + +WDL ++ A+
Sbjct: 402 SNADAVQPVAQYDFHKGAITSIAFNPLDESIVAVGSEDNTVTLWDL-SVEADDEEIKQQA 460
Query: 339 -QPDDAYDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWK 387
+ + + P+L +H + V + + +P + S + L +WK
Sbjct: 461 AETKELQEIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTDG-LNVWK 507
>CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 74.3 bits (181), Expect = 3e-13
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 182 SGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLI 241
S L+SA D TV +WD+ + S + F HTDIVN + + + S+D T++
Sbjct: 91 SSHLVSAGTDKTVRVWDMETG---SCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVM 147
Query: 242 IHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHE 301
+HD S A +K + F+ ++N++ G D+ + ++D+ R + ++GH
Sbjct: 148 VHDMRSKEAAKKFICKYQQTAVTFNDAADNVI-CGGIDNQIKVWDMLR-NDVRYVLSGHR 205
Query: 302 DSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELF 351
D++TSL S H L S+ D ++ WD+ Q+ Y G F
Sbjct: 206 DTITSLSVS-HNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNF 254
>Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 323
Score = 73.9 bits (180), Expect = 4e-13
Identities = 69/282 (24%), Positives = 121/282 (42%), Gaps = 21/282 (7%)
Query: 110 QSKIKIVRKFKHEQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHK 169
++ +++ R F + + + +++ T +G G + ++D K G + + H
Sbjct: 55 EAGLRLFRSFDWNDGLFDVTWSENNEHVLITCSGDGSLQLWDT---AKAAGPLQVYKEHA 111
Query: 170 ENGYGLAFNPTVSGQLL-SASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQS 228
+ Y + ++ T QL+ S S D TV LWD T KS TF H I+ W
Sbjct: 112 QEVYSVDWSQTRGEQLVVSGSWDQTVKLWD--PTVGKSLC-TFRGHESIIYSTIWSPHIP 168
Query: 229 SLFGTVSEDNTLIIHDTNSDRAIQKLSVSSA-FNTLAFSKRSENLLAAAGTDSNVYLYDL 287
F + S D TL I D + + A + + K +ENLL D ++ +DL
Sbjct: 169 GCFASASGDQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDL 228
Query: 288 RRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGV 347
R +++P+ + GH ++ ++FSP +L S D + W+ +PD + V
Sbjct: 229 RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNF------SKPDSLLETV 282
Query: 348 PELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPA 389
H + +FS S CS +E ++I+ PA
Sbjct: 283 E-----HHTEFTCGLDFSLQSPTQVADCSWDE--TIKIYDPA 317
>SPBC1711.16 [S] KOG0270 WD40 repeat-containing protein
Length = 516
Score = 73.2 bits (178), Expect = 7e-13
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 139 ATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWD 198
A + GAG + + K K + SYH + L+ N L+S S D T+ LWD
Sbjct: 228 AAVLGAGASQVNKKKKKSKK----INDSYHTDAVLALSSNRNAHNLLVSGSADTTLKLWD 283
Query: 199 VTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSS 258
+ ST N S T+ H+D V+ W+ S+ + S D T I D + A V+S
Sbjct: 284 L-STCNCVKSFTY--HSDKVSCLDWYSKAPSVLLSGSYDKTAKIADLRLEEAPSSFQVTS 340
Query: 259 AFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLT 318
+A+ + SEN + VY D R L K + + H+ ++ L +P +
Sbjct: 341 DVENVAWDQHSENNFFIGTDNGIVYYCDARNLSKSVWQLQAHDGPISCLSVNPSVPSFVA 400
Query: 319 SSGSDRRIIMWD 330
+ +DR + +W+
Sbjct: 401 TGSTDRVVKLWN 412
>Hs5902034 [S] KOG0270 WD40 repeat-containing protein
Length = 501
Score = 72.8 bits (177), Expect = 9e-13
Identities = 48/178 (26%), Positives = 86/178 (47%), Gaps = 5/178 (2%)
Query: 155 KEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVH 214
K+K +S H + L++N + L SAS D TV LWD++ P+ + VH
Sbjct: 242 KKKKGKKSSSAEGHTDAVLDLSWNKLIRNVLASASADNTVILWDMSLG---KPAASLAVH 298
Query: 215 TDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNS-DRAIQKLSVSSAFNTLAFSKRSENLL 273
TD V ++H F++ + S D ++ ++D S D + + S + ++ S
Sbjct: 299 TDKVQTLQFHPFEAQTLISGSYDKSVALYDCRSPDESHRMWRFSGQIERVTWNHFSPCHF 358
Query: 274 AAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
A+ D VY D R KP+ ++ H D ++ L+ S G L ++ +D+ + +WD+
Sbjct: 359 LASTDDGFVYNLDARS-DKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDI 415
>CE27292 [R] KOG0302 Ribosome Assembly protein
Length = 453
Score = 71.2 bits (173), Expect = 3e-12
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 16/214 (7%)
Query: 170 ENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSP-SQTFDVHTDIVNDCKWHEFQS 228
+ GYGLA++ +G L + + LW + + + H V D W ++
Sbjct: 229 KEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTET 288
Query: 229 SLFGTVSEDNTLIIHDTNSDR------AIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNV 282
L + S D ++ + DT S +QK S N ++++ R ENL+ + G D +
Sbjct: 289 GLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDV-NVISWN-RHENLIVSGGDDGEL 346
Query: 283 YLYDLRRLQ--KPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQP 340
++ L+ +Q +P+ H +TS+++ PH+ +SG D + +WD I E
Sbjct: 347 KIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWD---IATEADG 403
Query: 341 DDAYDGV-PELFMMHGGHRSPVNEFSHNSNVPWL 373
+GV P+L +H G ++ V E + +P L
Sbjct: 404 QTNIEGVPPQLMFVHMG-QNEVKEVHWHQQIPGL 436
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 70.9 bits (172), Expect = 3e-12
Identities = 66/215 (30%), Positives = 98/215 (44%), Gaps = 19/215 (8%)
Query: 121 HEQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIK----EKDHGAIASFSYHKENGYGLA 176
HE EV ++ P +TL AG FDR I D A+ H L
Sbjct: 65 HEGEVYCCKFHPNG----STLASAG----FDRLILLWNVYGDCDNYATLKGHSGAVMELH 116
Query: 177 FNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSE 236
+N T L SAS D TVA+WD + T + + HT VN C L T S+
Sbjct: 117 YN-TDGSMLFSASTDKTVAVWD-SETGERV--KRLKGHTSFVNSCYPARKSPQLVCTGSD 172
Query: 237 DNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHS 296
D T+ + D AIQ + + F+ S+ ++ + G D+++ ++DLR+ K ++
Sbjct: 173 DGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQ-NKLTYT 230
Query: 297 MAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
M GH DSVT L S + L S+ D + +WD+
Sbjct: 231 MRGHADSVTGLSLS-SEGSYLLSNAMDNTVRVWDV 264
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 70.9 bits (172), Expect = 3e-12
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 121 HEQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIK----EKDHGAIASFSYHKENGYGLA 176
HE E+ A + P+ ++++ FDR I +D + + S H
Sbjct: 54 HEGEIFTAEFHPEGELLLSSG--------FDRQIYIWQVYEDCENVMAMSGHSGAVMEAH 105
Query: 177 FNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSE 236
F P S + + S D T+A WD+ A + F H + VN + L + S+
Sbjct: 106 FTPDGS-HIFTCSTDKTLAFWDI---ATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSD 161
Query: 237 DNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHS 296
D T+ I D A L + F E +++ G D+ V ++D+R+ Q LH
Sbjct: 162 DRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISG-GIDNEVKIWDIRK-QAVLHH 219
Query: 297 MAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
+ GH D++T + SP D +LT++ D + +WD+
Sbjct: 220 LRGHSDTITGMSLSPEGDFILTNA-MDNTLRVWDV 253
>Hs20533300 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 196
Score = 70.5 bits (171), Expect = 4e-12
Identities = 66/242 (27%), Positives = 90/242 (36%), Gaps = 83/242 (34%)
Query: 13 INEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTT 72
I EEY +W +N YD V L WPSLT QWLP +P +G+ L+ GT T
Sbjct: 17 IKEEYKIWKNNTSFPYDLVMTQALEWPSLTAQWLPDVTRP---EGKDFSSHRLVPGT-HT 72
Query: 73 DNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFKHEQEVTRARYMP 132
E N+L + LP SDDA + + SH SK
Sbjct: 73 SVEQNHL----VQLP----------SDDA-QLDASHYNSK-------------------- 97
Query: 133 QSPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDG 192
K H++ G GL NP +SG LL SD+
Sbjct: 98 ------------------------KGECGDLHLCGHQKAGCGLLRNPNLSGHLLITSDNH 133
Query: 193 TVALWDVTSTANK----SPSQTFDVHTDIV----------------NDCKWHEFQSSLFG 232
T+ LWD+++ +N+ + F HT + D H F SLFG
Sbjct: 134 TICLWDISAVSNEEKVLNVKTIFTGHTAVFGDRDASSHLYHNLYYGKDASSHLFHESLFG 193
Query: 233 TV 234
++
Sbjct: 194 SI 195
>7296695 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 439
Score = 70.5 bits (171), Expect = 4e-12
Identities = 58/233 (24%), Positives = 102/233 (42%), Gaps = 31/233 (13%)
Query: 162 IASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDC 221
+ + HKE G++F+PT S + +S SDDGT+ +WD + + H V
Sbjct: 222 VKMYQAHKEAIRGISFSPTDS-KFVSGSDDGTLRIWDFMRCQEE---RVLRGHGADVKCV 277
Query: 222 KWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSEN--LLAAAGTD 279
WH Q + + S+DN I + I ++ + +T+ K ++N L A D
Sbjct: 278 HWHP-QKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVTASRD 336
Query: 280 SNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQ 339
+ L+D+R L++ + GH+ +S+ + P +GL S GSD I+ W N+G
Sbjct: 337 HLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFW---NVGRSTD 393
Query: 340 P-----DDAYDGVPELFMMHG-GHRSPVNEFSHNSNVPWLMCSVEEENVLQIW 386
+ A+D + H GH ++CS ++ ++ W
Sbjct: 394 KEIGCVETAHDSIVWTLAWHPLGH---------------ILCSGSNDHTIKFW 431
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 70.1 bits (170), Expect = 6e-12
Identities = 66/215 (30%), Positives = 98/215 (44%), Gaps = 19/215 (8%)
Query: 121 HEQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIK----EKDHGAIASFSYHKENGYGLA 176
HE EV ++ P +TL AG FDR I D A+ H L
Sbjct: 65 HEGEVYCCKFHPNG----STLASAG----FDRLILLWNVYGDCDNYATLKGHSGAVMELH 116
Query: 177 FNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSE 236
+N T L SAS D TVA+WD + T + + HT VN C L T S+
Sbjct: 117 YN-TDGSMLFSASTDKTVAVWD-SETGERV--KRLKGHTSFVNSCYPARRGPQLVCTGSD 172
Query: 237 DNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHS 296
D T+ + D AIQ + + F+ S+ ++ + G D+++ ++DLR+ K ++
Sbjct: 173 DGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQ-NKLTYT 230
Query: 297 MAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
M GH DSVT L S + L S+ D + +WD+
Sbjct: 231 MRGHADSVTGLSLS-SEGSYLLSNAMDNTVRVWDV 264
>YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 923
Score = 67.8 bits (164), Expect = 3e-11
Identities = 53/200 (26%), Positives = 102/200 (50%), Gaps = 15/200 (7%)
Query: 168 HKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHE-- 225
H ++ LA++P S ++++AS+DG + +WD+TS + TF+ HT V ++ +
Sbjct: 344 HFDSTNSLAYSPDGS-RVVTASEDGKIKVWDITSGFCLA---TFEEHTSSVTAVQFAKRG 399
Query: 226 ---FQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNV 282
F SSL GTV + + + + +++ FN LA E + A + + ++
Sbjct: 400 QVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQ----FNCLAVDPSGEVVCAGSLDNFDI 455
Query: 283 YLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDD 342
+++ ++ Q L +++GHE V+ L FS ++ +L S+ D+ I +W +F + +P +
Sbjct: 456 HVWSVQTGQL-LDALSGHEGPVSCLSFS-QENSVLASASWDKTIRIWSIFGRSQQVEPIE 513
Query: 343 AYDGVPELFMMHGGHRSPVN 362
Y V L M G V+
Sbjct: 514 VYSDVLALSMRPDGKEVAVS 533
>YDL195w [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1273
Score = 67.4 bits (163), Expect = 4e-11
Identities = 47/212 (22%), Positives = 94/212 (44%), Gaps = 19/212 (8%)
Query: 137 IIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVAL 196
IIA G + ++ N ++A FS H + + FN L S ++G + +
Sbjct: 76 IIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFI 135
Query: 197 WDVTSTANK-------SPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDR 249
WD+ +P Q+ ++++ W++ + +F + N I D + +
Sbjct: 136 WDMNKCTESPSNYTPLTPGQSMSSVDEVIS-LAWNQSLAHVFASAGSSNFASIWDLKAKK 194
Query: 250 AIQKLSVSSAFNTLA--------FSKRSENLLAAAGTDSN--VYLYDLRRLQKPLHSM-A 298
+ LS +S + + K S + A G+D++ + ++DLR PL ++
Sbjct: 195 EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQ 254
Query: 299 GHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWD 330
GH+ + SL++ + LL SSG D +++W+
Sbjct: 255 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWN 286
Score = 51.2 bits (121), Expect = 3e-06
Identities = 39/147 (26%), Positives = 68/147 (45%), Gaps = 15/147 (10%)
Query: 246 NSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMA---GHED 302
+S++ I L V S FN L +S ++ ++A A + ++ LY ++SMA H
Sbjct: 51 DSEKPIASLQVDSKFNDLDWSHNNK-IIAGALDNGSLELYSTNEANNAINSMARFSNHSS 109
Query: 303 SVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGGHRSPVN 362
SV +++F+ QD +L S G++ I +WD+ + P + P G S V+
Sbjct: 110 SVKTVKFNAKQDNVLASGGNNGEIFIWDMNK--CTESPSNYTPLTP------GQSMSSVD 161
Query: 363 E---FSHNSNVPWLMCSVEEENVLQIW 386
E + N ++ + S N IW
Sbjct: 162 EVISLAWNQSLAHVFASAGSSNFASIW 188
>CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 809
Score = 66.2 bits (160), Expect = 8e-11
Identities = 55/169 (32%), Positives = 76/169 (44%), Gaps = 11/169 (6%)
Query: 165 FSYHKENGY-GLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKW 223
FS HK+ GLAF PT + +ASDDGT +WD A + + H V W
Sbjct: 212 FSAHKDEAIRGLAFAPT-DVKFATASDDGTARVWDF---ARYTEERVLRGHGAEVRCIDW 267
Query: 224 HEFQSSLFGTVSEDNT--LIIHDTNSDRAIQKLSV-SSAFNTLAFSKRSENLLAAAGTDS 280
H + L T S D + I D S + L S+ + F+K N L G D
Sbjct: 268 HPTKG-LIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNG-NWLLTGGRDH 325
Query: 281 NVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMW 329
V +YD+R + K + + H+ V SL + P +GL S G D I+ W
Sbjct: 326 LVKMYDIR-MMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYW 373
>At3g63460 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1097
Score = 66.2 bits (160), Expect = 8e-11
Identities = 43/182 (23%), Positives = 77/182 (41%), Gaps = 9/182 (4%)
Query: 158 DHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTF----DV 213
++ + S HK GL FN S L S +DDG + +WD+ + S
Sbjct: 111 ENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSA 170
Query: 214 HTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKL--SVSSAFNTLAFSKR-SE 270
++ W+ + + S + T +I D + I SV + L ++ +
Sbjct: 171 TQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTT 230
Query: 271 NLLAAAGTDSN--VYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIM 328
++ A+ DS+ + L+D+R + P+ GH+ V ++E+ P L + D R I
Sbjct: 231 QIMVASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTIC 290
Query: 329 WD 330
WD
Sbjct: 291 WD 292
>At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 343
Score = 66.2 bits (160), Expect = 8e-11
Identities = 45/149 (30%), Positives = 76/149 (50%), Gaps = 8/149 (5%)
Query: 184 QLLSASDDGTVALWDV-TSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLII 242
Q++SAS D TV WDV T K ++ H+ VN C L + S+D T +
Sbjct: 110 QIVSASPDKTVRAWDVETGKQIKKMAE----HSSFVNSCCPTRRGPPLIISGSDDGTAKL 165
Query: 243 HDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHED 302
D AIQ ++FS ++ + G D++V ++DLR+ + + ++ GH+D
Sbjct: 166 WDMRQRGAIQTFPDKYQITAVSFSDAADKIF-TGGVDNDVKVWDLRKGEATM-TLEGHQD 223
Query: 303 SVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
++T + SP LLT +G D ++ +WD+
Sbjct: 224 TITGMSLSPDGSYLLT-NGMDNKLCVWDM 251
>Hs22060896 [T] KOG4378 Nuclear protein COP1
Length = 660
Score = 65.9 bits (159), Expect = 1e-10
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 15/193 (7%)
Query: 121 HEQEVTRARYMPQSPNIIA-TLNGAGIVYIFDRNIKEKD--HGAIASFSYHKENGYGLAF 177
H+ +VT Y I + +L+G I++ N+ HG+ S + K Y L F
Sbjct: 118 HKDQVTCVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLK---YSL-F 173
Query: 178 NPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFD-VHTDIVNDCKWHEFQSSLFGTVSE 236
++ G S SD+G V LWDV S +SP FD VH + + LF T+
Sbjct: 174 KKSLLG---SVSDNGIVTLWDVNS---QSPYHNFDSVHKAPASGICFSPVNELLFVTIGL 227
Query: 237 DNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHS 296
D +I++DT+S + ++ L + + F L A + +Y YDLR L+ P+ +
Sbjct: 228 DKRIILYDTSSKKLVKTLVADTPLTAVDFMPDGATL-AIGSSRGKIYQYDLRMLKSPVKT 286
Query: 297 MAGHEDSVTSLEF 309
++ H+ SV + F
Sbjct: 287 ISAHKTSVQCIAF 299
>7302720 [R] KOG0266 WD40 repeat-containing protein
Length = 307
Score = 65.5 bits (158), Expect = 1e-10
Identities = 49/158 (31%), Positives = 79/158 (49%), Gaps = 10/158 (6%)
Query: 174 GLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGT 233
GL F+ L+S+S D + LWD+++T Q+ H D VND W + L +
Sbjct: 61 GLKFSSN-GENLVSSSGDRLLKLWDLSATRC---IQSLAGHGDGVNDVAWSA--AGLIAS 114
Query: 234 VSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKP 293
S+D T+ + D S ++ L S ++ NLLA+ D V L+D+ R K
Sbjct: 115 CSDDMTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTSFDETVRLWDV-RTGKT 173
Query: 294 LHSMAGHEDSVTSLEFSPHQDG-LLTSSGSDRRIIMWD 330
L + H+D +TS++F H+DG + +S D + +WD
Sbjct: 174 LKIVHAHQDPITSVDF--HRDGNIFVTSSYDGLVRLWD 209
>SPBC1198.12 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 421
Score = 64.3 bits (155), Expect = 3e-10
Identities = 50/169 (29%), Positives = 78/169 (45%), Gaps = 9/169 (5%)
Query: 168 HKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQ 227
H++ GL ++ ++ GQL S +D + +WD S+ P F+ HT V W Q
Sbjct: 248 HEQEICGLQWDRSL-GQLASGGNDNNLFVWDYRSS---RPLHKFEEHTAAVKAIGWSPHQ 303
Query: 228 SSLF--GTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSN-VYL 284
+ G + D L IH+T + R KL S +A+SK S ++ G N V L
Sbjct: 304 RGILASGGGTIDRCLTIHNTLTGRLQNKLDTGSQVCNMAWSKTSNEIVTTHGFAKNQVSL 363
Query: 285 YDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFN 333
+ L K + ++ H + V L SP ++T +G D + W LFN
Sbjct: 364 WKYPSL-KNIANLTAHTNRVLYLSMSPDGQSIVTGAG-DETLRFWKLFN 410
Score = 57.8 bits (138), Expect = 3e-08
Identities = 37/139 (26%), Positives = 67/139 (47%), Gaps = 8/139 (5%)
Query: 184 QLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIH 243
QL +D G + +WD+ ST + ++ H++ V W++ + G +D ++ H
Sbjct: 180 QLAVGTDSGVIYIWDIESTKSV---RSLKGHSERVAALAWNDNTLTSGG---KDEVILHH 233
Query: 244 DTNSDRAIQKLSVSSAFNTLAFS-KRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHED 302
D + ++ RS LA+ G D+N++++D R +PLH H
Sbjct: 234 DLRAPGCCAEMMKVHEQEICGLQWDRSLGQLASGGNDNNLFVWDYRS-SRPLHKFEEHTA 292
Query: 303 SVTSLEFSPHQDGLLTSSG 321
+V ++ +SPHQ G+L S G
Sbjct: 293 AVKAIGWSPHQRGILASGG 311
>7301821 [S] KOG0269 WD40 repeat-containing protein
Length = 776
Score = 64.3 bits (155), Expect = 3e-10
Identities = 36/158 (22%), Positives = 81/158 (50%), Gaps = 2/158 (1%)
Query: 175 LAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTV 234
+A++ S L +A+ +G V++WD++ + ++ H + +H + ++ +
Sbjct: 71 VAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISG 130
Query: 235 SEDNTLIIHDTNSDRAIQKLSVSS-AFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKP 293
S+D T+ D SD++I +S + + FS ++N+ +A + V L+D+R+ K
Sbjct: 131 SQDGTIKCFDIRSDKSINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKC 190
Query: 294 LHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
+ H V + ++ P ++ L T S D++I +W++
Sbjct: 191 MVQFTAHYGPVYTCDWHPTRNWLATGS-RDKQIKVWNM 227
>SPBC1A4.07c [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 436
Score = 63.2 bits (152), Expect = 7e-10
Identities = 34/132 (25%), Positives = 66/132 (49%), Gaps = 3/132 (2%)
Query: 180 TVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNT 239
T G L A+ V++WD + +P F+ D + K++ ++S+ + D +
Sbjct: 155 TSKGGDLFATSGENVSIWDYS---RDTPVTKFEWGADTLPVVKFNYTETSVLASAGMDRS 211
Query: 240 LIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAG 299
++I+D + + KL N+++++ A D N+Y+YD+R L++ LH
Sbjct: 212 IVIYDLRTSSPLTKLITKLRTNSISWNPMEAFNFVAGSEDHNLYMYDMRNLKRALHVYKD 271
Query: 300 HEDSVTSLEFSP 311
H +V S++FSP
Sbjct: 272 HVSAVMSVDFSP 283
>Hs4557467 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 396
Score = 62.8 bits (151), Expect = 9e-10
Identities = 54/230 (23%), Positives = 99/230 (42%), Gaps = 16/230 (6%)
Query: 175 LAFNPTVSGQLLSASDDGTVALWDVTSTANKS----------PSQTFDVHTDIVNDCKWH 224
L P +LS DG + L+D+ +++ +S DVH V +W+
Sbjct: 49 LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWY 108
Query: 225 EFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRS-ENLLAAAGTDS-NV 282
+ +F + S D TL + DTN+ + + + S S ++ L A GT V
Sbjct: 109 PHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKV 168
Query: 283 YLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDD 342
L DL+ H + GH + ++ +SP D +L ++ +D R+ +WD+ D
Sbjct: 169 QLCDLKS-GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLD 227
Query: 343 AYDGVPE--LFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPAN 390
++G + + H VN S+ L+ +V +N +++W +N
Sbjct: 228 QHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLL-TVGTDNRMRLWNSSN 276
>At1g27840 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 254
Score = 62.8 bits (151), Expect = 9e-10
Identities = 52/186 (27%), Positives = 82/186 (43%), Gaps = 17/186 (9%)
Query: 166 SYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDI-------- 217
S H+ + L + T LLS + DG+ A++DV + S H I
Sbjct: 40 SPHRGSVNSLQVDLTEGRYLLSGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHE 99
Query: 218 ------VNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSV-SSAFNTLAFSKRSE 270
++ W+ + LF T S D+ L + DTN+ +A+ + + T S
Sbjct: 100 NGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMS 159
Query: 271 NLLAAAGT-DSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMW 329
+ L AAGT D V L D+ H+++GH D V S+E+S + +L + G D I W
Sbjct: 160 HTLIAAGTEDVQVRLCDIASGAFS-HTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Query: 330 DLFNIG 335
D+ G
Sbjct: 219 DIRRAG 224
>SPBC8D2.20c [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1224
Score = 62.4 bits (150), Expect = 1e-09
Identities = 73/310 (23%), Positives = 120/310 (38%), Gaps = 50/310 (16%)
Query: 42 TVQWLPTEMQPREVDGQQLLRQELLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDA 101
T+ W P + D Q LL GT + N L++ EN S KP S D
Sbjct: 11 TLAWSPRGVN----DNQALLALGGYTGTEGSKNSDTLLEL----WNENPESQKPVGSIDV 62
Query: 102 KENELSHRQSKIKIVRKFKHEQEVTRARYMPQSPNIIA-TLNGAGIVYIFDRNIKEKDHG 160
K ++ + + + +IA +L GI + I + D
Sbjct: 63 KTRFY-----------------DLAWEKSLDKPMGVIAGSLEDGGIGFWDPAAILKSDEA 105
Query: 161 AIASFSYHKENGYGLA---FNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDV---- 213
+ + +Y ENG L FN L S + G V +WD+ K P Q F +
Sbjct: 106 SASIATYKSENGSILGPLDFNRLQPNLLASGDNKGDVWVWDI-----KHPQQPFALPKQN 160
Query: 214 HTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLS---------VSSAFNTLA 264
+ V+ W+ S + + + + D R + LS + A N++A
Sbjct: 161 RSSEVHVVSWNNKVSHILASGNATEYTTVWDVKLKRQVLNLSYLGAAGVSAATGAVNSIA 220
Query: 265 FSKRSENLLAAAGTDSN---VYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSG 321
+ + LA A D+ + +DLR+ P + + GH+ + SL + P L SSG
Sbjct: 221 WHPNNATRLATAIDDNRNPIILTWDLRQPTVPQNILTGHQKAALSLSWCPEDPTFLLSSG 280
Query: 322 SDRRIIMWDL 331
D R ++W++
Sbjct: 281 KDGRAMVWNV 290
>SPAP17D4.01 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 297
Score = 62.0 bits (149), Expect = 2e-09
Identities = 51/224 (22%), Positives = 92/224 (40%), Gaps = 17/224 (7%)
Query: 113 IKIVRKFKHEQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENG 172
I++ + + E + R+ N + G G + +FD + K I + HK
Sbjct: 39 IQVCQHYDVEDSLFGVRWSQNCENQVYACCGDGSLRLFDLTMPSKP---IHKWKEHKAEI 95
Query: 173 YGLAFNPTVSGQLLSASDDGTVALW------DVTSTANKSPSQTFDVHTDIVNDCKWHEF 226
+ N +++ S DGT+ LW V + N S S+ V T H
Sbjct: 96 VAIDTNTVDRRIVVTGSWDGTIKLWLGNLPNSVQTLNNGSNSRILTVAT--------HYS 147
Query: 227 QSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYD 286
+L G S D D S + + + + +SK + ++ A ++ VY YD
Sbjct: 148 SPNLLGYTSSDGLCKFWDFRSSDKFMSIEIPNQITCMNWSKSNHRMVYTADNNNLVYCYD 207
Query: 287 LRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWD 330
+ L+ PL ++GH+ +V S++ S LL ++ D ++D
Sbjct: 208 IANLKTPLSVLSGHQLAVRSIKSSNSAHDLLATASYDMTSRIFD 251
>YLL011w [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 489
Score = 61.6 bits (148), Expect = 2e-09
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 188 ASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNS 247
A+ + LWDV P D + K+++ ++ + + DN+++++D +
Sbjct: 195 ATGGAKIHLWDVNRL---KPVSDLSWGADNITSLKFNQNETDILASTGSDNSIVLYDLRT 251
Query: 248 DRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSL 307
+ QK+ + N + ++ A D N Y YD+R L + L+ H +V +
Sbjct: 252 NSPTQKIVQTMRTNAICWNPMEAFNFVTANEDHNAYYYDMRNLSRSLNVFKDHVSAVMDV 311
Query: 308 EFSPHQDGLLTSS 320
+FSP D ++T S
Sbjct: 312 DFSPTGDEIVTGS 324
Score = 57.8 bits (138), Expect = 3e-08
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 51/210 (24%)
Query: 134 SPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFN--------PTVSGQ- 184
S N +AT + G++ ++ + +E+ SF H GL P + Q
Sbjct: 79 SLNKLATGSADGVIKYWNMSTREE----FVSFKAHYGLVTGLCVTQPRFHDKKPDLKSQN 134
Query: 185 -LLSASDDGTVALW--DVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLI 241
+LS SDD TV LW +V +NK+ S DN +
Sbjct: 135 FMLSCSDDKTVKLWSINVDDYSNKN----------------------------SSDNDSV 166
Query: 242 IHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHE 301
TN + I+ SAF + S R + A G + ++L+D+ RL KP+ ++
Sbjct: 167 ---TNEEGLIRTFDGESAFQGID-SHRENSTFATGG--AKIHLWDVNRL-KPVSDLSWGA 219
Query: 302 DSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
D++TSL+F+ ++ +L S+GSD I+++DL
Sbjct: 220 DNITSLKFNQNETDILASTGSDNSIVLYDL 249
>Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 1336
Score = 61.6 bits (148), Expect = 2e-09
Identities = 47/181 (25%), Positives = 80/181 (43%), Gaps = 12/181 (6%)
Query: 162 IASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDC 221
+ F HKE +F+PT + + SDDGTV +WD + + H V
Sbjct: 195 VKMFQAHKEAIREASFSPT-DNKFATCSDDGTVRIWDFLRCHEE---RILRGHGADVKCV 250
Query: 222 KWHEFQSSLF-GTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRS--ENLLAAAGT 278
WH + + G+ + D + +++ L NT+ K + N L A
Sbjct: 251 DWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHK--NTVMEVKLNLNGNWLLTASR 308
Query: 279 DSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQ 338
D L+D+R L++ L GH+ T++ + P +GL S GSD ++ W ++G E+
Sbjct: 309 DHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFW---HVGVEK 365
Query: 339 Q 339
+
Sbjct: 366 E 366
>SPAC144.13c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 556
Score = 61.2 bits (147), Expect = 3e-09
Identities = 43/149 (28%), Positives = 74/149 (48%), Gaps = 10/149 (6%)
Query: 185 LLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHD 244
L + +G+V +WD A ++T HT+ V W++ S G DN ++ D
Sbjct: 306 LAVGTHNGSVEIWDA---ATCKKTRTMSGHTERVGALSWNDHVLSSGG---RDNHILHRD 359
Query: 245 TNSDRAIQKLSVSSAFNTLAFSKRS-ENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDS 303
+ ++ + S ENLLA+ G D+ + ++D + +KPL+S H +
Sbjct: 360 VRAPEHYFRVLTAHRQEVCGLEWNSNENLLASGGNDNALMVWD-KFEEKPLYSFHNHIAA 418
Query: 304 VTSLEFSPHQDGLLTSSG--SDRRIIMWD 330
V ++ +SPHQ G+L S G +DR I +W+
Sbjct: 419 VKAITWSPHQRGILASGGGTADRTIKLWN 447
Score = 52.4 bits (124), Expect = 1e-06
Identities = 41/189 (21%), Positives = 84/189 (43%), Gaps = 10/189 (5%)
Query: 148 YIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSP 207
+I R+++ +H + H++ GL +N L S +D + +WD + P
Sbjct: 354 HILHRDVRAPEH-YFRVLTAHRQEVCGLEWNSN-ENLLASGGNDNALMVWD---KFEEKP 408
Query: 208 SQTFDVHTDIVNDCKWHEFQSSLF--GTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAF 265
+F H V W Q + G + D T+ + +T + + S L +
Sbjct: 409 LYSFHNHIAAVKAITWSPHQRGILASGGGTADRTIKLWNTQRGSMLHNIDTGSQVCNLLW 468
Query: 266 SKRSENLLAAAG-TDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDR 324
SK++ ++ G ++ V L++ + + + ++ GH D V L SP+ + ++T + +D
Sbjct: 469 SKQTNEFISTHGFMENEVALWNYPSVSR-VGTLKGHTDRVLYLAMSPNGENIVTGA-ADE 526
Query: 325 RIIMWDLFN 333
+ W LF+
Sbjct: 527 TLRFWKLFD 535
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 61.2 bits (147), Expect = 3e-09
Identities = 78/314 (24%), Positives = 134/314 (41%), Gaps = 37/314 (11%)
Query: 74 NEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFKHEQEVTRARYMPQ 133
+EP+ + ++ I L ++ + D+A +++KI+R H V R++
Sbjct: 304 SEPHQVDVSRIHLACDILEEEDDEDDNAG--------TEMKILRG--HCGPVYSTRFLAD 353
Query: 134 SPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGY---GLAFNPTVSGQLLSASD 190
S +++ D +I+ D G+ + ++ + Y L +P S S S
Sbjct: 354 SSGLLSCSE--------DMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP-YSLYFASGSH 404
Query: 191 DGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRA 250
D T LW T P + + H V+ K+H S+ T S D T+ + +
Sbjct: 405 DRTARLWSFDRTY---PLRIYAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNS 460
Query: 251 IQKLSVSSA-FNTLAFSKRSENLLAAAGTDSNVYLYDLRR--LQKPLHSMAGHEDSVTSL 307
++ + +LAFS + LA+AG D + L+DL L K L GH D++TSL
Sbjct: 461 VRLFTGHRGPVLSLAFSPNGK-YLASAGEDQRLKLWDLASGTLYKELR---GHTDNITSL 516
Query: 308 EFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGGHRSPVNEFSHN 367
FSP GL+ S+ D + +WD+ N D + EL ++ G S V
Sbjct: 517 TFSP-DSGLIASASMDNSVRVWDIRNTYCSAPADGSSS---ELVGVYTGQMSNVLSVQFM 572
Query: 368 SNVPWLMCSVEEEN 381
+ L+ + +EN
Sbjct: 573 ACNLLLVTGITQEN 586
>At1g19750 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 254
Score = 61.2 bits (147), Expect = 3e-09
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 17/194 (8%)
Query: 166 SYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDI-------- 217
S H+ + L + T LLS + DG+ A++DV + S H I
Sbjct: 40 SPHRGSVNSLQVDLTEGRYLLSGAADGSAAVFDVKRATDYEASGLIAKHKCIFTVRKQHE 99
Query: 218 ------VNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSV-SSAFNTLAFSKRSE 270
++ W+ + +F T S D+ + + DTN+ + + + + T S
Sbjct: 100 NGHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMS 159
Query: 271 NLLAAAGTDS-NVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMW 329
+ L AAGTD V L D+ H+++GH D V S+E+S + +L + G D I W
Sbjct: 160 HTLIAAGTDDVQVRLCDIASGAFS-HTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Query: 330 DLFNIGAEQQPDDA 343
D+ G + D++
Sbjct: 219 DIRRAGCFRVLDNS 232
>Hs14784298 [R] KOG4227 WD40 repeat protein
Length = 942
Score = 60.8 bits (146), Expect = 3e-09
Identities = 59/229 (25%), Positives = 101/229 (43%), Gaps = 15/229 (6%)
Query: 168 HKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQ 227
H++ YGL+ +P S+SDDG V +WD+ + + P + + + ++ +
Sbjct: 141 HEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCLAN-YPSAFHSVMFNPVE 199
Query: 228 SSLFGTVSEDNTLIIHDTNSDRAI-----QKLSVSSAFNTLAFSKRSENLLAAAGTDSNV 282
L T + + + D ++ LS+ SA ++ F+ LLA V
Sbjct: 200 PRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAM-SVRFNSNGTQLLALRRRLPPV 258
Query: 283 YLYDLR-RLQKPLHSMAGHEDSVT--SLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQ 339
LYD+ RL G+ +S T S F+ +D + S D + MW I A+ +
Sbjct: 259 -LYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMW---RIPADPE 314
Query: 340 PDDAYDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKP 388
V FM+ GHRS VN+ N + +++CS E +++IW P
Sbjct: 315 AGGIGRVVNGAFMVLKGHRSIVNQVRFNPHT-YMICSSGVEKIIKIWSP 362
>Hs7019573 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 repeats
Length = 753
Score = 60.5 bits (145), Expect = 4e-09
Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 28/181 (15%)
Query: 168 HKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQ--TFDVHTDIVNDCKWHE 225
H + +GLAF+PT S +L S S DGTV +WD +S+ SP+ TF ++ H
Sbjct: 543 HGDAVWGLAFSPT-SQRLASCSADGTVRIWDPSSS---SPACLCTFPTASE-------HG 591
Query: 226 FQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTL-------------AFSKRSENL 272
+S+ T +E ++ + D + + V SA TL S ++ L
Sbjct: 592 VPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESRGSSGPTQINQVVSHPNQPL 651
Query: 273 LAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLF 332
A D + D R KP+HSM H D+VT L P+ L S D + +W L
Sbjct: 652 TITAHDDRGIRFLD-NRTGKPVHSMVAHLDAVTCLAVDPN-GAFLMSGSHDCSLRLWSLD 709
Query: 333 N 333
N
Sbjct: 710 N 710
>CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 60.1 bits (144), Expect = 6e-09
Identities = 39/153 (25%), Positives = 75/153 (48%), Gaps = 8/153 (5%)
Query: 180 TVSGQLLSASDDGTVALWDV-TSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDN 238
T S L+S D +V +WD+ T T ++ F HTD VN +L + S+D
Sbjct: 91 TDSSSLVSCGTDKSVRVWDMETGTC----ARRFRTHTDFVNAVHPSRRGVTLVASASDDG 146
Query: 239 TLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMA 298
T +HD + ++ + + F+ S+ +++ G D+ + ++D+RR + +++
Sbjct: 147 TCRVHDMRTKEPVKTYTNRYQQTAVTFNDSSDQVISG-GIDNVLKVWDMRR-DEITYTLT 204
Query: 299 GHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
GH D++T + SP + S+ D + WD+
Sbjct: 205 GHRDTITGISLSP-SGKFIISNSMDCTVRQWDI 236
>SPBC577.09 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 404
Score = 59.3 bits (142), Expect = 1e-08
Identities = 47/225 (20%), Positives = 102/225 (44%), Gaps = 17/225 (7%)
Query: 175 LAFNPTVSGQLLSASDDGTVALWD------------VTSTANKSPSQTFDVHTDIVNDCK 222
L+ + T+ ++S + ++ +WD + T N P++T H + D
Sbjct: 53 LSIDNTIHQLMVSGGANSSINVWDLQNIDQKEDEDLILDTLNAVPARTS--HKFGITDLH 110
Query: 223 WHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSK-RSENLLAAAGTDSN 281
W F + +F + S D+TL + D ++ + ++ + A+S S L+A A S+
Sbjct: 111 WFPFDNGIFTSSSFDHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIASHCLIATAYRSSS 170
Query: 282 VYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPD 341
+ L D++ HS++GH +V ++++ P + +L S +D +WD+ + +
Sbjct: 171 IRLCDMQS-GSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSSSFACM 229
Query: 342 DAYDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIW 386
D ++ + H VN + S+ +L S ++ +++W
Sbjct: 230 DLHNKYLPSNQTNISHYGTVNGLAWTSDARYL-ASCGTDDRIRVW 273
>CE01695 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 702
Score = 59.3 bits (142), Expect = 1e-08
Identities = 49/190 (25%), Positives = 84/190 (43%), Gaps = 9/190 (4%)
Query: 149 IFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPS 208
I R+I+ D+ + H++ GL ++P L S +D + +W++ P
Sbjct: 502 IMHRDIRCDDNDMGRKLTNHRQEVCGLKWSPDKQ-LLASGGNDNQLLVWNLR---RNEPI 557
Query: 209 QTFDVHTDIVNDCKWHEFQSSLF--GTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFS 266
QT+ H V W L G + D L +T + + +Q + S +A+S
Sbjct: 558 QTYTQHNAAVKALAWSPHHHGLLVSGGGTADRCLRFWNTLTAQPMQCVDTGSQVCNVAWS 617
Query: 267 KRSENLLAAAGTDSN-VYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRR 325
K S L++ G N V ++ LQ P+ + GH+ V L SP + ++T +G D
Sbjct: 618 KHSSELVSTHGYSFNHVIIWKYPSLQ-PVTKLVGHQYRVLYLAMSPDGESIVTGAG-DET 675
Query: 326 IIMWDLFNIG 335
+ W +FN G
Sbjct: 676 LRFWHVFNKG 685
Score = 54.7 bits (130), Expect = 2e-07
Identities = 48/201 (23%), Positives = 86/201 (41%), Gaps = 12/201 (5%)
Query: 183 GQLLSASDD-GTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLI 241
G LL+ G +WDVT+ + ++ H+ V W+ + + S D T++
Sbjct: 450 GDLLAVGTSRGVTQIWDVTT---QKKTRELTGHSSRVGCLAWN---ADTICSGSRDRTIM 503
Query: 242 IHDTNSDRAIQKLSVSSAFNTLAFSKRS--ENLLAAAGTDSNVYLYDLRRLQKPLHSMAG 299
D D +++ + K S + LLA+ G D+ + +++LRR +P+ +
Sbjct: 504 HRDIRCDDNDMGRKLTNHRQEVCGLKWSPDKQLLASGGNDNQLLVWNLRR-NEPIQTYTQ 562
Query: 300 HEDSVTSLEFSPHQDGLLTSSG--SDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGGH 357
H +V +L +SPH GLL S G +DR + W+ Q D + H
Sbjct: 563 HNAAVKALAWSPHHHGLLVSGGGTADRCLRFWNTLTAQPMQCVDTGSQVCNVAWSKHSSE 622
Query: 358 RSPVNEFSHNSNVPWLMCSVE 378
+ +S N + W S++
Sbjct: 623 LVSTHGYSFNHVIIWKYPSLQ 643
>7290304 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 535
Score = 59.3 bits (142), Expect = 1e-08
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 21/223 (9%)
Query: 115 IVRKFKHEQEVTRARYMPQSPNIIATLNGAGIVYIFD---RNIKEKDHGAIASFSYHKEN 171
+V+ Q+ Q ++A + G V +FD RNI G A H+
Sbjct: 73 VVKNLSRFQKTAYGATFRQDGRLLAAGDEEGHVKLFDTTSRNILRLFKGHTAPV--HR-- 128
Query: 172 GYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTF-DVHTDIVNDCKWHEFQSSL 230
F QL S DD +V LWDV AN+ QT+ D HTD V H +
Sbjct: 129 ----TFFTADKLQLASFGDDKSVRLWDV---ANEKVVQTYEDTHTDYVRAGAMHPQAGHM 181
Query: 231 FGTVSEDNTLIIHDTNSDRAIQK-LSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRR 289
F + D + ++DT ++ A+Q+ L + ++ F ++A G S V ++DL
Sbjct: 182 FVSGGYDGKIKLYDTRAETAVQRTLDHGAPVESMLFLPNGSIFVSAGG--SQVRVWDLIS 239
Query: 290 LQKPLHSMAGHEDSVTSLEFSPHQDG-LLTSSGSDRRIIMWDL 331
+ L M+ H +VT L DG L S G DR + ++D+
Sbjct: 240 GCRLLTMMSQHHKTVTCLRLG--SDGRRLLSGGLDRHVKIYDV 280
>SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 509
Score = 58.9 bits (141), Expect = 1e-08
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 17/194 (8%)
Query: 142 NGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWD--V 199
+G G+V F+ N+ + H+ +AF+P S + ++ASDDG++ +W+ +
Sbjct: 142 DGGGMVKYFEPNLNN-----VKIVQAHEMEVRDVAFSPNDS-KFVTASDDGSLKVWNFHM 195
Query: 200 TSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKL-SVSS 258
++ K +DV T WH L + S+DN + D + I L +
Sbjct: 196 STEELKLTGHGWDVKT-----VDWHP-SKGLLASGSKDNLVKFWDPRTGTCIATLHGHKN 249
Query: 259 AFNTLAFSKR-SENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLL 317
+F K N LA DS ++DLR + K + + GHE V + + P LL
Sbjct: 250 TIMQASFQKNFGSNYLATVSRDSTCRVFDLRAM-KDVRVLRGHEKDVNCVTWHPLYPNLL 308
Query: 318 TSSGSDRRIIMWDL 331
T+ GSD + + L
Sbjct: 309 TTGGSDGSVNHYSL 322
>At4g35370 [S] KOG0270 WD40 repeat-containing protein
Length = 414
Score = 58.5 bits (140), Expect = 2e-08
Identities = 41/161 (25%), Positives = 71/161 (43%), Gaps = 5/161 (3%)
Query: 175 LAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTV 234
L FN + S S+D V +WDV + K T + H V+ W+ + + +
Sbjct: 220 LTFNWENRNIVASGSEDKKVKVWDVATGKCK---VTMEHHEKKVHAVAWNNYTPEVLLSG 276
Query: 235 SEDNTLIIHD-TNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQ-K 292
S D T+++ D + + K S + LA+ SE+ + D V +D R
Sbjct: 277 SRDRTVVLKDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLS 336
Query: 293 PLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFN 333
P + H+ V+S+ ++ H LL + +D + +WDL N
Sbjct: 337 PSFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSN 377
>Hs14149987 [S] KOG0269 WD40 repeat-containing protein
Length = 790
Score = 58.2 bits (139), Expect = 2e-08
Identities = 49/209 (23%), Positives = 86/209 (40%), Gaps = 11/209 (5%)
Query: 120 KHEQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNP 179
+H++ V + + P +++ + + G + FD ++ KD ++++FS E+ + F+
Sbjct: 118 EHKRTVNKVCFHPTEAHVLLSGSQDGFMKCFD--LRRKD--SVSTFSGQSESVRDVQFSI 173
Query: 180 TVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNT 239
S ++G V LWD+ + F H V C WH T D
Sbjct: 174 RDYFTFASTFENGNVQLWDIRRPDRCE--RMFTAHNGPVFCCDWHPEDRGWLATGGRDKM 231
Query: 240 LIIHDTNSDRAIQKLSVSSAFNTLAFSKRSE--NLLAAAG--TDSNVYLYDLRRLQKPLH 295
+ + D + RA + V + + R E + LA D N+Y++D+RR P
Sbjct: 232 VKVWDMTTHRAKEMHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRRPFVPAA 291
Query: 296 SMAGHEDSVTSLEF-SPHQDGLLTSSGSD 323
H D T + + PH L S D
Sbjct: 292 MFEEHRDVTTGIAWRHPHDPSFLLSGSKD 320
Score = 57.4 bits (137), Expect = 4e-08
Identities = 35/148 (23%), Positives = 64/148 (42%), Gaps = 1/148 (0%)
Query: 185 LLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHD 244
L +A+ +G V W++ + Q F H VN +H ++ + + S+D + D
Sbjct: 90 LATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCFD 149
Query: 245 TNSDRAIQKLS-VSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDS 303
++ S S + + FS R A+ + NV L+D+RR + H
Sbjct: 150 LRRKDSVSTFSGQSESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGP 209
Query: 304 VTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
V ++ P G L + G D+ + +WD+
Sbjct: 210 VFCCDWHPEDRGWLATGGRDKMVKVWDM 237
>YPL247c [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 523
Score = 57.8 bits (138), Expect = 3e-08
Identities = 81/394 (20%), Positives = 154/394 (38%), Gaps = 67/394 (17%)
Query: 22 SNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTTDNEPNYLKI 81
SN + ++ V + + +P +QW+P+++ PR++ L I +++ + +I
Sbjct: 160 SNDLLSWESVVDADVVYPVSKIQWVPSQLYPRKL---ATCSDSLRIWSVSPEERQFQEQI 216
Query: 82 -AAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFKHEQEVTRARYMPQSPNIIAT 140
++ + P+ +DD +K++ F +T + N+I +
Sbjct: 217 NLSLCKYNRQHPANPAAADD------------MKVIGTFP---PITSFDWNTVDTNLIIS 261
Query: 141 LNGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVT 200
+ ++D + H H + + F + S DG+V ++D+
Sbjct: 262 SSIDTTCIVWDL---QSSHYVKTQLIAHDSEVFDVRFLTKSTQLFASCGGDGSVRVFDLR 318
Query: 201 STANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAF 260
S A H+ I+ + + GT++ + S A
Sbjct: 319 SLA----------HSTIIYEPPSSSVSGATAGTITPSS----------------KGSDAL 352
Query: 261 NTLAFSKRSENLLAAAGTDSN-VYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTS 319
L S N+LA DSN + + D+R + P+ ++ GH SV +++ P + +L S
Sbjct: 353 LRLEPSPYDPNVLATFAADSNKIIILDMRNPESPILNLQGHGSSVNGIKWHPTKRNVLLS 412
Query: 320 SGSDRRIIMWDL------FNIGAEQQPD------DAYDGVPELFMMHGGHRSPVNE--FS 365
G D +++ WDL N + P + DG E M GG S +NE S
Sbjct: 413 CGDDCQVLYWDLNSSFMEINAAGSKSPSIHGTSLEDPDGDTE--MTDGGAGSGLNEDPLS 470
Query: 366 HNSNVPWLMCSVEEENVLQIWK--PANKIVRPPQ 397
N+N + ++E N++ K N I PQ
Sbjct: 471 LNNNSKQVCKTLETPNMMYANKTQEINNIAWRPQ 504
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 57.4 bits (137), Expect = 4e-08
Identities = 59/235 (25%), Positives = 94/235 (39%), Gaps = 47/235 (20%)
Query: 149 IFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTS------- 201
+ +R + EK + H YG +F+P LLS+S+DGTV LW + +
Sbjct: 523 VLERIMDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQTFTCLVGY 581
Query: 202 --------------------------------TANKSPSQTFDVHTDIVNDCKWHEFQSS 229
T + P + F H VN ++H S+
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP-NSN 640
Query: 230 LFGTVSEDNTLIIHDTNSDRAIQKLSVSSA-FNTLAFSKRSENLLAAAGTDSNVYLYDLR 288
T S D T+ + D + ++ + ++L FS LA TD V L+D+
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR-FLATGATDGRVLLWDIG 699
Query: 289 RLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGS-DRRIIMWDLFNIGAEQQPDD 342
+ + GH D+V SL FS +DG + +SGS D + +WD + + DD
Sbjct: 700 H-GLMVGELKGHTDTVCSLRFS--RDGEILASGSMDNTVRLWDAIKAFEDLETDD 751
>7295052 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 339
Score = 57.4 bits (137), Expect = 4e-08
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 130 YMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIAS------FSYHKENGYGLAFNPTVSG 183
+ P + +I AT +G G + I+ E + HK Y L + +
Sbjct: 78 WCPYAADIAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQEHKNEVYSLDWGEKWNY 137
Query: 184 Q-LLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLII 242
LLS S D T+ LWD ++ TF H D++ K+ ++LF +VS D L +
Sbjct: 138 HTLLSGSWDCTLKLWDCN---RQNSITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNL 194
Query: 243 HDTNSDRAIQKLSVSS-AFNTLA--FSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAG 299
++ +S+ + A L +S N+L G+D + +DLR+++ + +
Sbjct: 195 WNSLDFAGKPLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIRGWDLRKMRTHVFELYS 254
Query: 300 HEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
E +V L SPH +L S+ D +W+L
Sbjct: 255 GEFAVRRLACSPHSAAVLASANYDFTTRIWNL 286
>At1g18830 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 911
Score = 57.0 bits (136), Expect = 5e-08
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 162 IASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSP--SQTFDVHTDIVN 219
+ S HK GL FN QL S +DDGTV +WD+ + + S T ++
Sbjct: 108 VRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEIS 167
Query: 220 DCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSEN-LLAAAGT 278
W++ + + S + T +I D N+++ I L + + L + N +L A+
Sbjct: 168 SLSWNKGFQHVLASTSHNGTTVIWDVNNEKIITDLKTTVRCSVLQWDPDHFNQILVASDE 227
Query: 279 DS--NVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWD 330
DS NV D + V ++E+ P L + G D R I W+
Sbjct: 228 DSSPNVKSGD-----------TCYTTGVIAMEWCPSDSLYLLTCGKDNRTICWN 270
>Hs8923881 [R] KOG0266 WD40 repeat-containing protein
Length = 404
Score = 56.6 bits (135), Expect = 6e-08
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 179 PTVSGQLLSAS-DDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSED 237
P VS +L+ +DG + +W+V + H D+V D + S + + S D
Sbjct: 119 PDVSCLVLATGLNDGQIKIWEVQTGLLLL---NLSGHQDVVRDLSFTPSGSLILVSASRD 175
Query: 238 NTLIIHDTNSD-RAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHS 296
TL I D N + IQ LS + ++L +A + +V+L+ +R +
Sbjct: 176 KTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTL-IRK 234
Query: 297 MAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWD 330
+ GH+ SV S +FSP LL ++ D +IMWD
Sbjct: 235 LEGHQSSVVSCDFSP-DSALLVTASYDTNVIMWD 267
>7303715 [BK] KOG1063 RNA polymerase II elongator complex subunit ELP2 WD
repeat superfamily
Length = 504
Score = 56.6 bits (135), Expect = 6e-08
Identities = 63/226 (27%), Positives = 93/226 (40%), Gaps = 41/226 (18%)
Query: 184 QLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQ--SSLFGTVSEDNTLI 241
+LLS DD LW++ T + S T HT VN Q S L T + D T+
Sbjct: 70 KLLSGGDDAIAILWELDETGT-TKSFTLKGHTSGVNTVDGIRQQDGSWLLATAAADTTIK 128
Query: 242 I--HDTNSDRAIQKLSVSSAF----NTLAFSKRSENLLAAAGTDSNVYLYD--------- 286
+ N+ Q +S+S F K ++ LLA +G D V L+
Sbjct: 129 LWTFQDNNYVCFQTISLSDGFCFCLRLQLLPKSNQVLLAFSGDDETVSLWSEQVETAGEG 188
Query: 287 --LRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGS-DRRIIMWDLFNIGAEQQPDDA 343
L R + H + GHED V L+F + LL +SGS D I +W + EQ ++
Sbjct: 189 DSLGRQFQRKHKLTGHEDWVRGLDFVVDGEDLLLASGSQDNFIRLWRIAPRSKEQMQENR 248
Query: 344 YDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPA 389
D +++ SHN + + EE +LQ+ K A
Sbjct: 249 VD---------------LHQLSHNDDEIKV-----EEKILQLGKEA 274
>YNL317w [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 465
Score = 56.2 bits (134), Expect = 8e-08
Identities = 68/289 (23%), Positives = 117/289 (39%), Gaps = 34/289 (11%)
Query: 121 HEQEVTRARYMPQSPNIIATLNGAGIVYIFDRN---IKEKDHGAIASFSYHKENGYGLAF 177
H+ VT +Y S +I+ + G++ I+ N +KE D + H E+ +AF
Sbjct: 134 HDSAVTTMKYSHDSDWMISG-DADGMIKIWQPNFSMVKEID-------AAHTESIRDMAF 185
Query: 178 NPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSED 237
+ S + ++ SDD + +W+ + N + H V C WH + L + S+D
Sbjct: 186 SSNDS-KFVTCSDDNILKIWNFS---NGKQERVLSGHHWDVKSCDWHP-EMGLIASASKD 240
Query: 238 NTLIIHDTNSDRAIQK-LSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHS 296
N + + D S I L F NLL A D + ++D+R K L
Sbjct: 241 NLVKLWDPRSGNCISSILKFKHTVLKTRFQPTKGNLLMAISKDKSCRVFDIRYSMKELMC 300
Query: 297 MAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGG 356
+ D +T LE+ P + + T + D + +DL Q ++ +P
Sbjct: 301 VRDETDYMT-LEWHPINESMFTLACYDGSLKHFDLL-----QNLNEPILTIPY------A 348
Query: 357 HRSPVNEFSHNSNVPWLMCSVEEENVLQIWKPANKIVRPPQPPADFDIT 405
H + S+N V + + ++ ++ W A RP P A D T
Sbjct: 349 HDKCITSLSYNP-VGHIFATAAKDRTIRFWTRA----RPIDPNAYDDPT 392
>7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 700
Score = 56.2 bits (134), Expect = 8e-08
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 207 PSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSV-SSAFNTLAF 265
P +TF HT+ VN KW Q L + S+D TL I N DR L S T+ +
Sbjct: 526 PIKTFKGHTNEVNAIKWCP-QGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKW 584
Query: 266 S--------KRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLL 317
S + +LA+A DS V L+D+ R +H++ H + V S+ FSP DG
Sbjct: 585 SPTGPGTNNPNTNLILASASFDSTVRLWDVER-GSCIHTLTKHTEPVYSVAFSP--DGKH 641
Query: 318 TSSGS-DRRIIMW 329
+SGS D+ + +W
Sbjct: 642 LASGSFDKCVHIW 654
>At5g27570 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 411
Score = 55.8 bits (133), Expect = 1e-07
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 162 IASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQT----FDVHTDI 217
+ ++ H E GL ++ + +L S +D V +WD S A+ +P++ F+ HT
Sbjct: 211 VETYLGHTEEVCGLKWSES-GKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAA 269
Query: 218 VNDCKWHEFQSSLFGTVS--EDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAA 275
V W FQ+SL T D + +T++ + + S +L +SK LL++
Sbjct: 270 VRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSKSERELLSS 329
Query: 276 AG-TDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDG-LLTSSGSDRRIIMWDLF 332
G T + + L+ + K + + GH V + SP DG + S+ D + +W++F
Sbjct: 330 HGFTQNQLTLWKYPSMVK-MAELNGHTSRVLFMAQSP--DGCTVASAAGDETLRLWNVF 385
>YNL035c [R] KOG1188 WD40 repeat protein
Length = 389
Score = 55.5 bits (132), Expect = 1e-07
Identities = 58/219 (26%), Positives = 95/219 (42%), Gaps = 25/219 (11%)
Query: 162 IASFSYHKENGYG-----LAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTD 216
+AS+S + N +G L P+ LL+ +G + L D ++ + Q
Sbjct: 1 MASYSLVESNSFGSENWCLKLQPSYKHGLLTGLSNGEIRLLDWSTGKSV---QKIKASET 57
Query: 217 IVNDCK--WHEFQSS-LFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLL 273
+ND K +F + L + S D + +DR Q + + N+ S S + L
Sbjct: 58 AINDMKVIGSDFSAGHLVSSASIDAVKVFDIRTNDRIAQ---IQNEANSPFISLDSRHGL 114
Query: 274 AAAGT-----DSNVYLYDLRRLQKPLHSMA-GHEDSVTSLEFSPHQDGLLTSSGSDRRII 327
A GT D+ VY+YD+R+ PL S+ H D VT ++F P +L S +D
Sbjct: 115 LACGTELQGIDAAVYIYDIRKWDTPLRSLIDSHHDDVTCIKFHPSDVNILLSGSTDGYTN 174
Query: 328 MWDLFNIGAEQQPDDAYDGVPELFMMHG-GHRSPVNEFS 365
++DL + + +DA V +H G SP F+
Sbjct: 175 IYDL----KQDEEEDALHQVINYASIHSCGWLSPKRIFT 209
>SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 340
Score = 55.5 bits (132), Expect = 1e-07
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 184 QLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIH 243
Q+ DG + +WD+ N S H DI+ + SSL S DNT+ I
Sbjct: 191 QVFIGGIDGAIKIWDLR---NNHCSHVLKGHKDIITSLAISKDGSSLLSN-SMDNTVRIF 246
Query: 244 DTNSDRAIQK-LSV------SSAFNTLAFS-KRSENLLAAAGTDSNVYLY----DLRRLQ 291
D + Q+ L + N L + R+ + A +D NVY++ DLR
Sbjct: 247 DVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYVWSATGDLR--- 303
Query: 292 KPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
+ + GHE SV ++F PHQD ++ S SDR I + +L
Sbjct: 304 ---YVLPGHEGSVNHVDFHPHQD-IILSCSSDRTIFLGEL 339
>Hs10092627 [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 445
Score = 55.5 bits (132), Expect = 1e-07
Identities = 41/194 (21%), Positives = 88/194 (45%), Gaps = 18/194 (9%)
Query: 194 VALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQK 253
V +WD T N S T+ D ++ K++ ++ L G+ + D ++++D ++K
Sbjct: 178 VDIWDEQRT-NPICSMTWGF--DSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKK 234
Query: 254 LSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQ 313
+ + NT+ ++ + AA D N+Y +D+R L P+ H +V +++SP
Sbjct: 235 VILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTG 294
Query: 314 DGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGGHRSPVNEFSHNSNVPWL 373
+++S D+ I ++ + + + + H V S+ ++
Sbjct: 295 KEFVSAS-FDKSIRIFPVDKSRSRE-------------VYHTKRMQHVICVKWTSDSKYI 340
Query: 374 MCSVEEENVLQIWK 387
MC +E N+ ++WK
Sbjct: 341 MCGSDEMNI-RLWK 353
>At5g27080 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 466
Score = 55.5 bits (132), Expect = 1e-07
Identities = 49/222 (22%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 162 IASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQT----FDVHTDI 217
+ ++ H E GL ++ + +L S + V +WD S A+ P++ F+ HT
Sbjct: 242 VGTYLGHTEEVCGLKWSES-GKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAA 300
Query: 218 VNDCKWHEFQSSLFGTVS--EDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAA 275
V W FQ++L T D + +T++ + + S +L +S+R LL++
Sbjct: 301 VRALAWCPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSS 360
Query: 276 AG-TDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNI 334
G T + + L+ + K + + GH V + SP+ + +++G D + +W++F
Sbjct: 361 HGFTQNQLTLWKYPSMSK-MAELNGHTSRVLFMAQSPNGCTVASAAG-DENLRLWNVF-- 416
Query: 335 GAEQQPDDAYDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCS 376
G P ++ + FSH +++ W + S
Sbjct: 417 -----------GEPPKTTKKAASKNYLELFSHVNSLRWCLVS 447
>7294287 [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 446
Score = 55.5 bits (132), Expect = 1e-07
Identities = 28/117 (23%), Positives = 59/117 (49%), Gaps = 3/117 (2%)
Query: 195 ALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKL 254
A+WD + P +T D ++ ++ ++S+ + D ++I++D + ++K+
Sbjct: 179 AIWD---ERHNDPLKTLKWGVDTLHTISYNPVETSILACCASDRSIILYDQREAQPLRKV 235
Query: 255 SVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSP 311
++ N LA++ A D ++Y +D R+LQ PL H +VT +++SP
Sbjct: 236 VLTMKSNKLAWNPMEAFNFTVANEDYSLYTFDTRKLQTPLKVHFDHVSAVTDVDYSP 292
>At5g26900 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 444
Score = 54.7 bits (130), Expect = 2e-07
Identities = 47/196 (23%), Positives = 89/196 (44%), Gaps = 9/196 (4%)
Query: 162 IASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQ---TFDVHTDIV 218
+ ++ H E GL ++ + + Q S +D V +WD + ++K Q F+ HT V
Sbjct: 245 VETYLGHTEEVCGLKWSESGNKQA-SGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAV 303
Query: 219 NDCKWHEFQSSLFGTVS--EDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAA 276
W FQ+SL T D + +T++ + + S +L +S+ LL++
Sbjct: 304 RALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSH 363
Query: 277 G-TDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIG 335
G T + + L+ + K + + GH V + SP+ + +++G D + +W++F
Sbjct: 364 GFTQNQLTLWKYPSMSK-MAELNGHTSRVLFMAQSPNGCTVASAAG-DENLRLWNVFGEP 421
Query: 336 AEQQPDDAYDGVPELF 351
+ A PELF
Sbjct: 422 PKTTKKAASKKYPELF 437
>Hs13129110 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 342
Score = 54.3 bits (129), Expect = 3e-07
Identities = 47/169 (27%), Positives = 72/169 (41%), Gaps = 8/169 (4%)
Query: 162 IASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTD--IVN 219
++S+ H +A +P LS S+D + LWD T P+ +
Sbjct: 160 LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWD---TRCPKPASQIGCSAPGYLPT 216
Query: 220 DCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNT-LAFSKRSENLLAAAGT 278
WH QS +F E+ T+ + DT S + +V S T L FS S LA+
Sbjct: 217 SLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSE 276
Query: 279 DSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRII 327
D ++ + D L + S A H D V +SP LLT+ G D +++
Sbjct: 277 DCSLAVLD-SSLSELFRSQA-HRDFVRDATWSPLNHSLLTTVGWDHQVV 323
>ECU03g1520 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 369
Score = 53.9 bits (128), Expect = 4e-07
Identities = 36/117 (30%), Positives = 60/117 (50%), Gaps = 4/117 (3%)
Query: 225 EFQSSLFGTVSEDNTLIIHDTNSDRAIQK-LSVSSAFNTLAFSKRSENLLAAAGTDSNVY 283
E +S+ T S D + I D S++A+ L L+ SK LA+ G D+ +Y
Sbjct: 159 ESESTNVITGSRDRKIKITDLRSEKAVATILHHRQEVCGLSISK-DLRFLASGGNDNRLY 217
Query: 284 LYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSG--SDRRIIMWDLFNIGAEQ 338
+YD R L PL + H+ +V ++ +SP LL S G +D+ + +WD+ I + +
Sbjct: 218 IYDYRNLSHPLKQCSNHKAAVKAMSWSPLSPNLLISGGGTADKTVKLWDVNMINSSR 274
>CE05083 [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 444
Score = 53.9 bits (128), Expect = 4e-07
Identities = 30/154 (19%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Query: 173 YGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFG 232
YG++ + + S ++ +D +++W ++P +++++ TD ++ C+ + + ++
Sbjct: 157 YGVS-HLSFSSDFVTCGED--ISVW---KPYRETPLRSYNLGTDTIHTCRANPVEENVIV 210
Query: 233 TVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQK 292
D ++ + DT D ++K+++ N ++++ A D ++Y +D+R ++
Sbjct: 211 GARSDRSIYVLDTRQDVPLKKVTMKMRPNKISWNPMEAYNFTVASEDYSLYTFDMRYMEH 270
Query: 293 PLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRI 326
P+ S G +V +++SP + ++G DR I
Sbjct: 271 PVQSHQGFTSAVLDVDYSPTGQEFV-AAGYDRSI 303
>At5g27940 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 584
Score = 53.9 bits (128), Expect = 4e-07
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 162 IASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQT----FDVHTDI 217
I ++ H E GL ++ + +L S +D V +WD S A+ +P++ F+ HT
Sbjct: 385 IGTYVGHTEEVCGLKWSES-GKKLASGGNDNVVHIWD-RSLASSNPTRQWLHRFEEHTAA 442
Query: 218 VNDCKWHEFQSSLFGTVS--EDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAA 275
V W FQ+SL T D + +T++ + + S +L +SK LL+A
Sbjct: 443 VRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSA 502
Query: 276 AG-TDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDG-LLTSSGSDRRIIMWDLF 332
G T + + L+ + K + + GH V + SP DG + S+ D + +W++F
Sbjct: 503 HGFTQNQLTLWKYPSMVK-MAELNGHTSRVLFMAQSP--DGCTVASAAGDETLRLWNVF 558
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 53.5 bits (127), Expect = 5e-07
Identities = 50/206 (24%), Positives = 85/206 (40%), Gaps = 15/206 (7%)
Query: 185 LLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHD 244
L + ++D + +WD+ N+ H + + L S D T+ I D
Sbjct: 458 LATGAEDRLIRIWDIE---NRKIVMILQGHEQDIYSLDYFPSGDKLVSG-SGDRTVRIWD 513
Query: 245 TNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYD------LRRLQKPLHSMA 298
+ + LS+ T+A S +AA D V ++D + RL S
Sbjct: 514 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT 573
Query: 299 GHEDSVTSLEFSPHQDGLLTSSGS-DRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGGH 357
GH+DSV S+ F+ +DG SGS DR + +W+L N + G E+ + GH
Sbjct: 574 GHKDSVYSVVFT--RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI--GH 629
Query: 358 RSPVNEFSHNSNVPWLMCSVEEENVL 383
+ V + N +++ ++ VL
Sbjct: 630 KDFVLSVATTQNDEYILSGSKDRGVL 655
>Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 53.5 bits (127), Expect = 5e-07
Identities = 42/147 (28%), Positives = 75/147 (50%), Gaps = 11/147 (7%)
Query: 184 QLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIH 243
++ SAS D T+ +WDV S + KS + + V +C + + S D + +
Sbjct: 270 EICSASWDHTIRVWDVESGSLKST-----LTGNKVFNCISYSPLCKRLASGSTDRHIRLW 324
Query: 244 DTNS-DRAIQKLSVSSA---FNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAG 299
D + D ++ LS++S ++ +S E L + D+ V L+D R + PL+ +A
Sbjct: 325 DPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAA 384
Query: 300 HEDSVTSLEFSPHQDGLLTSSGSDRRI 326
HED V S++++ GLL S G+D ++
Sbjct: 385 HEDKVLSVDWT--DTGLLLSGGADNKL 409
Score = 50.8 bits (120), Expect = 4e-06
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 205 KSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLA 264
++P T H + V+ W + + + S D+T+ + D S L+ + FN ++
Sbjct: 247 RTPIVTLSGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVESGSLKSTLTGNKVFNCIS 304
Query: 265 FSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMA--GHEDSVTSLEFSPHQDGLLTSSGS 322
+S + L A+ TD ++ L+D R L S++ H VTS+++SP + L S
Sbjct: 305 YSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSL 363
Query: 323 DRRIIMWD-------LFNIGAEQQPDDAYDGVPELFMMHGG 356
D + +WD L+++ A + + D ++ GG
Sbjct: 364 DNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGG 404
>Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 53.1 bits (126), Expect = 7e-07
Identities = 42/147 (28%), Positives = 75/147 (50%), Gaps = 11/147 (7%)
Query: 184 QLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIH 243
++ SAS D T+ +WDV S + KS + + V +C + + S D + +
Sbjct: 270 EICSASWDHTIRVWDVGSGSLKST-----LTGNKVFNCISYSPLCKRLASGSTDRHIRLW 324
Query: 244 DTNS-DRAIQKLSVSSA---FNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAG 299
D + D ++ LS++S ++ +S E L + D+ V L+D R + PL+ +A
Sbjct: 325 DPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAA 384
Query: 300 HEDSVTSLEFSPHQDGLLTSSGSDRRI 326
HED V S++++ GLL S G+D ++
Sbjct: 385 HEDKVLSVDWT--DTGLLLSGGADNKL 409
Score = 50.8 bits (120), Expect = 4e-06
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 205 KSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLA 264
++P T H + V+ W + + + S D+T+ + D S L+ + FN ++
Sbjct: 247 RTPIVTLSGHMEAVSSVLWSDAEEIC--SASWDHTIRVWDVGSGSLKSTLTGNKVFNCIS 304
Query: 265 FSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMA--GHEDSVTSLEFSPHQDGLLTSSGS 322
+S + L A+ TD ++ L+D R L S++ H VTS+++SP + L S
Sbjct: 305 YSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSL 363
Query: 323 DRRIIMWD-------LFNIGAEQQPDDAYDGVPELFMMHGG 356
D + +WD L+++ A + + D ++ GG
Sbjct: 364 DNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGG 404
>At5g24520 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 341
Score = 53.1 bits (126), Expect = 7e-07
Identities = 50/204 (24%), Positives = 92/204 (44%), Gaps = 22/204 (10%)
Query: 177 FNPTVSGQLLSASDDGTVALWDVTSTANKSPSQT-FDVHTDIVNDCKWHEFQSSLFGTVS 235
+N +L + S D T +WD+ KS +T H V+D W E + +F +VS
Sbjct: 140 WNDVEPKRLGTCSIDTTCTIWDI----EKSVVETQLIAHDKEVHDIAWGE--ARVFASVS 193
Query: 236 EDNTLIIHDTNSDRAIQKLSVSSAFNT----LAFSKRSENLLAAAGTDSN-VYLYDLRRL 290
D ++ I D + S +T LA++K+ +A DSN V + D+R
Sbjct: 194 ADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSP 253
Query: 291 QKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPEL 350
P+ + H+ SV ++ ++P + S G D + ++W+L + +G+ +
Sbjct: 254 TMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGP-------NGIDPM 306
Query: 351 FMMHGGHRSPVNEFSHNSNVP-WL 373
+ G S +N+ +S+ P W+
Sbjct: 307 SVYSAG--SEINQLQWSSSQPDWI 328
>YPL151c [A] KOG0285 Pleiotropic regulator 1
Length = 451
Score = 52.8 bits (125), Expect = 9e-07
Identities = 42/158 (26%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 175 LAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTV 234
+A +P + ++ S+D T+ +WD+ + K+ T H V D + LF +V
Sbjct: 145 VAIDPVDNEWFITGSNDTTMKVWDLATGKLKT---TLAGHVMTVRDVAVSDRHPYLF-SV 200
Query: 235 SEDNTLIIHDTNSDRAIQKL-SVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKP 293
SED T+ D ++ I+ S T++ + L+A AG DS + L+D+ R + P
Sbjct: 201 SEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLD-LIATAGRDSVIKLWDM-RTRIP 258
Query: 294 LHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
+ ++ GH+ + ++ +P D + SS +D + +WD+
Sbjct: 259 VITLVGHKGPINQVQCTP-VDPQVVSSSTDATVRLWDV 295
>YNL006w [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 303
Score = 52.8 bits (125), Expect = 9e-07
Identities = 53/222 (23%), Positives = 97/222 (42%), Gaps = 18/222 (8%)
Query: 117 RKFKHEQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLA 176
R +H + ++AT G V ++D I+ + +ASF H+ N ++
Sbjct: 26 RTIQHSDSQVNRLEITNDKKLLATA-GHQNVRLYD--IRTTNPNPVASFEGHRGNVTSVS 82
Query: 177 FNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDV-HTDIVNDCKWHEFQSSLFGTVS 235
F + ++++S+DGT+ +WDV +SPS + H VN+ H Q L +
Sbjct: 83 FQQD-NRWMVTSSEDGTIKVWDV-----RSPSIPRNYKHNAPVNEVVIHPNQGELI-SCD 135
Query: 236 EDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSE-NLLAAAGTDSNVYLYDLRRLQ--- 291
D + I D ++ +L+ + + S S+ ++LAAA T N Y++++
Sbjct: 136 RDGNIRIWDLGENQCTHQLTPEDDTSLQSLSMASDGSMLAAANTKGNCYVWEMPNHTDAS 195
Query: 292 --KPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
KP+ H +T + S L T S +D +W +
Sbjct: 196 HLKPVTKFRAHSTYITRILLSSDVKHLATCS-ADHTARVWSI 236
>YLR196w [S] KOG0270 WD40 repeat-containing protein
Length = 576
Score = 52.8 bits (125), Expect = 9e-07
Identities = 42/172 (24%), Positives = 76/172 (43%), Gaps = 11/172 (6%)
Query: 166 SYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHE 225
++H + +A N L S S D TV LWD+ S N + S V+ +WH
Sbjct: 283 THHTDAVLSMAHNKYFRSVLASTSADHTVKLWDLNS-GNAARSLASIHSNKNVSSSEWHM 341
Query: 226 FQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSA-----FNTLAFSKRSENLLAAAGTDS 280
S+ T D+ + + D Q SA T+ F+ SEN++
Sbjct: 342 LNGSILLTGGYDSRVALTDVRISDESQMSKYWSAMAGEEIETVTFA--SENIILCGTDSG 399
Query: 281 NVYLYDLRRLQ--KPLHSMAGHEDSVTSLEFSPHQDGLL-TSSGSDRRIIMW 329
NVY +D+R + KP+ ++ H+ +++L + G++ T + ++ + +W
Sbjct: 400 NVYSFDIRNNENRKPVWTLKAHDAGISTLCSNKFIPGMMSTGAMGEKTVKLW 451
>ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 408
Score = 52.8 bits (125), Expect = 9e-07
Identities = 63/268 (23%), Positives = 110/268 (40%), Gaps = 30/268 (11%)
Query: 121 HEQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPT 180
HE V + P +I++ N GI+ + ++ I H E L+F+
Sbjct: 138 HESPVRGMEWSPSGLFLISSDN-FGIIKYWHPSMNN-----IQIIQGHTEAVRDLSFSHN 191
Query: 181 VSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTL 240
S + SASDD T+ +WD +S H V +WH+++ SL + +DN +
Sbjct: 192 DS-KFCSASDDSTIKIWDSIEAKEES---VLRGHNWDVRAAQWHKYK-SLIASAGKDNLV 246
Query: 241 IIHDTNSDRAIQKLSVSSAFNTLAFSK--RSENLLAAAGTDSNVYLYDLRRLQKPLHSMA 298
+ D + A + ++ NT+ K EN L G D + + D+R + + +
Sbjct: 247 KMWDPRT--AEELCTLHHHKNTILALKWMGDENYLLTGGKDQVIKMVDIRTM-TDVFTYK 303
Query: 299 GHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGGHR 358
H+ VTS+ P + S G++ I W AY VP L ++ GH
Sbjct: 304 NHKKEVTSIGTHPCIPDIFVSGGTEGGIYFW------------QAYTQVP-LEVIEEGHE 350
Query: 359 SPVNEFSHNSNVPWLMCSVEEENVLQIW 386
V ++ V ++ S + ++ W
Sbjct: 351 GTVWSLDYHP-VGHILASGSVDQSVRFW 377
>7303990 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1240
Score = 52.8 bits (125), Expect = 9e-07
Identities = 42/190 (22%), Positives = 75/190 (39%), Gaps = 7/190 (3%)
Query: 147 VYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKS 206
+Y D+ + K+ + H GL FNP + L S + + + +WD+ +
Sbjct: 94 IYSADKLLAGKEEPLLKRQDKHTGAVSGLDFNPFQNNLLASCASESEILIWDLNNPETSM 153
Query: 207 PSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSA---FNTL 263
T + V + W+ + +V +I D + I KLS S + ++ +
Sbjct: 154 SPGTKTQPLEDVKNVAWNRQVQHILASVFSTRC-VIWDLRKSQQIIKLSDSQSRVRWHAI 212
Query: 264 AFSKRSENLLAAAGTDSN---VYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSS 320
+ + + A D V L+DLR P + HE V + + + L+ S
Sbjct: 213 EWHPEAATQVWLASEDDQAPVVQLWDLRYATAPAKTYQIHERGVLGMSWCLQDNDLMVSC 272
Query: 321 GSDRRIIMWD 330
G D RI W+
Sbjct: 273 GKDNRIYCWN 282
>7303687 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 704
Score = 52.8 bits (125), Expect = 9e-07
Identities = 57/184 (30%), Positives = 86/184 (45%), Gaps = 11/184 (5%)
Query: 152 RNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTF 211
R + ++ S H Y AF P ++ LLS S+D T+ LW S S T+
Sbjct: 433 RMLDDRSGEVTRSLMGHTGPVYRCAFAPEMN-LLLSCSEDSTIRLW---SLLTWSCVVTY 488
Query: 212 DVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQK-LSVSSAFNTLAFSKRSE 270
H V D ++ F + S D T + T+S++A++ + S + + F S
Sbjct: 489 RGHVYPVWDVRFAP-HGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNS- 546
Query: 271 NLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGS-DRRIIMW 329
N +A +D V L+D + + M GH+ SV+SL FS G +SGS D II+W
Sbjct: 547 NYVATGSSDRTVRLWD-NMTGQSVRLMTGHKGSVSSLAFS--ACGRYLASGSVDHNIIIW 603
Query: 330 DLFN 333
DL N
Sbjct: 604 DLSN 607
>Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 514
Score = 52.4 bits (124), Expect = 1e-06
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 207 PSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSV-SSAFNTLAF 265
P +TF HT+ VN KW + +L + S+D TL I D + L + T+ +
Sbjct: 341 PIKTFQGHTNEVNAIKW-DPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKW 399
Query: 266 S--------KRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLL 317
S + +LA+A DS V L+D+ R +H++ H++ V S+ FSP DG
Sbjct: 400 SPTGPGTNNPNANLMLASASFDSTVRLWDVDR-GICIHTLTKHQEPVYSVAFSP--DGRY 456
Query: 318 TSSGS-DRRIIMWD 330
+SGS D+ + +W+
Sbjct: 457 LASGSFDKCVHIWN 470
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 52.4 bits (124), Expect = 1e-06
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 207 PSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSV-SSAFNTLAF 265
P +TF HT+ VN KW + L + S+D TL I D + L S T+ +
Sbjct: 351 PVKTFQGHTNEVNAIKW-DPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKW 409
Query: 266 S--------KRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLL 317
S S +LA+A DS V L+D+ + H++ H++ V S+ FSP DG
Sbjct: 410 SPTGPATSNPNSSIMLASASFDSTVRLWDVEQ-GVCTHTLMKHQEPVYSVAFSP--DGKY 466
Query: 318 TSSGS-DRRIIMWD 330
+SGS D+ + +W+
Sbjct: 467 LASGSFDKYVHIWN 480
>CE24997 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 478
Score = 52.4 bits (124), Expect = 1e-06
Identities = 64/316 (20%), Positives = 119/316 (37%), Gaps = 55/316 (17%)
Query: 80 KIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFKHEQEVTRARYMPQS----P 135
++A E ++ V D + EL HR + F H T+ ++P P
Sbjct: 167 RLAVSSFIEEYSNKIHIVQLDEEAGELVHRST-------FDHPYPATKIMWIPDQKGTFP 219
Query: 136 NIIATL------------NGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSG 183
+++AT N A I + + N + + SF + N
Sbjct: 220 DLLATSGDYLRLWRIGTDNNACIESLLNTNRTAEYCAPLTSFDW----------NELDMN 269
Query: 184 QLLSASDDGTVALWDVTS---TANKSPSQTFD--------VHTDIVNDCKWHEFQSSLFG 232
+ ++S D T +W + + P+ D H V D + + +F
Sbjct: 270 LIGTSSIDTTCTVWQLETGQAIGTTRPTAAIDGTVRTQLIAHDKEVFDISFSRGSAQIFA 329
Query: 233 TVSEDNTLIIHDTNSDRAIQKLSVS------SAFNTLAFSKRSENLLAAAGTDSN-VYLY 285
+V D +L + D R ++ ++ LA+++ N +A G DS V +
Sbjct: 330 SVGADGSLRLFDL---RRLEHSTIMYEDPQRQPLLRLAWNRNDHNYIATFGQDSKEVLIL 386
Query: 286 DLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAE-QQPDDAY 344
DLR P+ + HE ++ L ++PH + ++G D + ++WD+ + P AY
Sbjct: 387 DLRLPCTPVARLRNHEATINGLSWAPHSGSHICTAGDDYQALIWDVHEMPKPINDPILAY 446
Query: 345 DGVPELFMMHGGHRSP 360
E+ +H P
Sbjct: 447 RAQAEVNQIHWSSSFP 462
>Hs22043515 [S] KOG0295 WD40 repeat-containing protein
Length = 414
Score = 52.0 bits (123), Expect = 2e-06
Identities = 48/170 (28%), Positives = 75/170 (43%), Gaps = 22/170 (12%)
Query: 177 FNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSE 236
F+P+ +L ++S D TV LWD+ TF+ H+ V C WH + + S
Sbjct: 43 FHPS-GDKLATSSGDTTVKLWDL---CKGDCILTFEGHSRAVWSCTWHSC-GNFVASSSL 97
Query: 237 DNTLIIHDTNSDRAIQKLSVSSAFNTLAFSK-------RSENLLAAAGTDSNVYLYDLRR 289
D T I D NS+ ++ ++ L F S NL A + Y +
Sbjct: 98 DKTSKIWDVNSETVLRAPNLHPKKVDLYFCTVQKEGRDHSTNLNMATEDNEQEGTYSGTK 157
Query: 290 LQKPLHS---------MAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWD 330
+ ++ + GH DSV S+EF P + LLTSS +D+ + +WD
Sbjct: 158 PEATKNNGESERCRCTLYGHTDSVNSIEFFPFSNTLLTSS-ADKTLSIWD 206
>CE03274 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 430
Score = 52.0 bits (123), Expect = 2e-06
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 185 LLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHD 244
LL A+D TV L+++ + + + D HT+ V D + E + L+ T S+D + I D
Sbjct: 229 LLVATDHPTVRLYNIETAQAYASANPDDQHTESVTDVHYSE-NARLYVTASKDGHVKIWD 287
Query: 245 TNSDRAIQKLSVSSAFNTLAFSKRSEN--LLAAAGTDSNVYLYDLRRLQKPL----HSMA 298
S+R ++ + +++ +K ++N + +G DS V L++L + +
Sbjct: 288 GVSNRCVETFKRAHDGSSICSAKFTKNGKYILTSGMDSIVKLWELSTNRCLIVYTGAGAT 347
Query: 299 GHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQPDDAYDGVPELFMMHGGHR 358
G +D T+ F+ ++D +L + WD N ++ ++ GH
Sbjct: 348 GAQDFATNASFNHNEDYVLFPDEKSGSMCSWDARNSDRKR-------------LLALGHT 394
Query: 359 SPVNEFSHNSNVPWLMCSVEEENVLQIW--KPA 389
S F H+ ++P M ++ + W KPA
Sbjct: 395 SACRTFVHSPSMPAFMTGSDDHRA-RFWYRKPA 426
>At3g26640 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 346
Score = 52.0 bits (123), Expect = 2e-06
Identities = 49/229 (21%), Positives = 104/229 (45%), Gaps = 17/229 (7%)
Query: 119 FKHEQEVTRARYMP----QSPNIIATLNGAGIVY-IFDRNIKEKDHGAIASFSYHKENGY 173
F+H T+ ++P Q P+++AT + ++ I D + + ++S + +G
Sbjct: 78 FEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSGP 137
Query: 174 GLAF--NPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLF 231
+F N ++ ++S D T +WD+ + H V D W +F
Sbjct: 138 ITSFDWNEAEPRRIGTSSIDTTCTIWDIE---REVVDTQLIAHDKEVYDIAWGGV--GVF 192
Query: 232 GTVSEDNTLIIHDT----NSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDS-NVYLYD 286
+VSED ++ + D +S + S+ L+++K+ +A S + + D
Sbjct: 193 ASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVVLD 252
Query: 287 LRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIG 335
+R P+ + H+ SV ++ ++PH + S+G D + ++WD+ ++G
Sbjct: 253 IRFPALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMG 301
>Hs21071065 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 745
Score = 51.6 bits (122), Expect = 2e-06
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 24/196 (12%)
Query: 149 IFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPS 208
+ +R + EK + H YG +F+P LW +T + P
Sbjct: 523 VLERIMDEKTASELKILYGHSGPVYGASFSPD--------------RLW---ATDHYQPL 565
Query: 209 QTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSA-FNTLAFSK 267
+ F H VN ++H S+ T S D T+ + D + ++ + ++L FS
Sbjct: 566 RIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 624
Query: 268 RSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGS-DRRI 326
LA TD V L+D+ + + GH D+V SL FS +DG + +SGS D +
Sbjct: 625 NGR-FLATGATDGRVLLWDIGH-GLMVGELKGHTDTVCSLRFS--RDGEILASGSMDNTV 680
Query: 327 IMWDLFNIGAEQQPDD 342
+WD + + DD
Sbjct: 681 RLWDAIKAFEDLETDD 696
>At2g26060 [R] KOG0645 WD40 repeat protein
Length = 323
Score = 51.6 bits (122), Expect = 2e-06
Identities = 58/230 (25%), Positives = 89/230 (38%), Gaps = 24/230 (10%)
Query: 168 HKENGYGLAFNPT------VSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDC 221
H + + +A+NP VS L S S D TV +W+ +S S S T HT V C
Sbjct: 16 HTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSL---SRSWTCKTHTRTVRSC 72
Query: 222 KWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFS---KRSENLLAAAGT 278
W L T S D T I N + +S S S + LA
Sbjct: 73 AWSP-SGQLLATASFDGTTGIW-KNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSR 130
Query: 279 DSNVYLYDLRRLQK--PLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGA 336
D +V+++++ + + GH V +++ P D L + S + + W
Sbjct: 131 DKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWW------- 183
Query: 337 EQQPDDAYDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCSVEEENVLQIW 386
+ D Y V L + GH S V S N+ M + ++ L+IW
Sbjct: 184 SEDDDGEYQCVQTLGESNNGHSSTVWSISFNA-AGDKMVTCSDDLTLKIW 232
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 51.2 bits (121), Expect = 3e-06
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 176 AFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVS 235
AF P S ++++ + D T +WD + ++P T H + V W + T S
Sbjct: 150 AFAPHTSSRMVTGAGDNTARIWDCDT---QTPMHTLKGHYNWVLCVSWSP-DGEVIATGS 205
Query: 236 EDNTLIIHDTNSDRAI-------QKLSVSSAFNTLAFSK-RSENLLAAAGTDSNVYLYD- 286
DNT+ + D S + + K S ++ + K S+ LA++ D + ++D
Sbjct: 206 MDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDT 265
Query: 287 LRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIG 335
+ R+ + ++M+GH +SV+ +++ GLL S DR + +WD+ + G
Sbjct: 266 VSRVCQ--YTMSGHTNSVSCVKWG--GQGLLYSGSHDRTVRVWDINSQG 310
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 51.2 bits (121), Expect = 3e-06
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 7/172 (4%)
Query: 161 AIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVND 220
A+ ++ H + +AF P +AS D T LW S + P + F H V D
Sbjct: 413 ALVAYKGHTGPVWDVAFGP-FGHYFATASHDQTAQLW---SCDHIYPLRVFAGHLSDV-D 467
Query: 221 CKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDS 280
C S+ T S D T + D + +++ + + T + +A+A ++
Sbjct: 468 CVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEG 527
Query: 281 NVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLF 332
++L+D+ ++ + +M GH ++ SL FS + +L S GSD + WD+F
Sbjct: 528 LIHLWDIGTGRR-IKTMRGHRGNIYSLSFS-RESTVLVSGGSDCTVRAWDVF 577
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 51.2 bits (121), Expect = 3e-06
Identities = 45/175 (25%), Positives = 76/175 (42%), Gaps = 13/175 (7%)
Query: 163 ASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCK 222
AS + H F+P+ S +L++ S D T LWD + ++P T HT+ V+
Sbjct: 128 ASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDT---QTPIATMKGHTNWVSCVA 184
Query: 223 WHEFQSSLFGTVSEDNTLIIHDTNSDRAI-------QKLSVSSAFNTLAFSKRSENLLAA 275
W +S+ T S DNT+ D I K ++ + L + S L A
Sbjct: 185 WAP-DASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLA 243
Query: 276 AGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWD 330
+G+ N +L+ L +++GH +T + + + SS D+ I +WD
Sbjct: 244 SGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG--GQNWIYSSSYDKTIRIWD 296
>SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 854
Score = 51.2 bits (121), Expect = 3e-06
Identities = 42/160 (26%), Positives = 80/160 (49%), Gaps = 10/160 (6%)
Query: 184 QLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIH 243
++++ +DDG + +WD+ S TF HT V+ + + + LF + S D ++
Sbjct: 353 RIITGADDGKIKVWDMNSGFC---IVTFTQHTSAVSGLCFSKRGNVLFSS-SLDGSVRAW 408
Query: 244 DTNSDRAIQKLSVSSA--FNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHE 301
D R + + S F+ +A E + A + ++++ ++ Q L ++AGHE
Sbjct: 409 DLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQL-LETLAGHE 467
Query: 302 DSVTSLEFSPHQDGLLTSSGS-DRRIIMWDLFNIGAEQQP 340
V+SL F + G L +SGS D+ + +WD+F+ +P
Sbjct: 468 GPVSSLSF--NSSGSLLASGSWDKTVRIWDIFSRSGIVEP 505
>Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 577
Score = 51.2 bits (121), Expect = 3e-06
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 207 PSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSV-SSAFNTLAF 265
P +TF HT+ VN KW + L + S+D TL I + I L + T+ +
Sbjct: 404 PVKTFQGHTNEVNAIKW-DPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKW 462
Query: 266 S--------KRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLL 317
S S +LA+A DS V L+D+ R H++ H++ V S+ FSP DG
Sbjct: 463 SPTGPATSNPNSNIMLASASFDSTVRLWDIER-GVCTHTLTKHQEPVYSVAFSP--DGKY 519
Query: 318 TSSGS-DRRIIMWD 330
+SGS D+ + +W+
Sbjct: 520 LASGSFDKCVHIWN 533
>Hs18874090 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 677
Score = 51.2 bits (121), Expect = 3e-06
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 167 YHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEF 226
Y++ L +P ++ +L +A D + +W V + + HTD VND
Sbjct: 28 YNRNGVNALQLDPALN-RLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCN 86
Query: 227 QSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAF-NTLAFSKRSENLLAAAGTDSNVYLY 285
+L + S D T+ + + + + L + LA++K E L+A+AG D ++L+
Sbjct: 87 GKTLI-SASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKE-LVASAGLDRQIFLW 144
Query: 286 DLRRLQK--------PLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRII-MWD 330
D+ L S++G++DS+ SL + +Q G + SGS +++ +WD
Sbjct: 145 DVNTLTALTASNNTVTTSSLSGNKDSIYSL--AMNQLGTIIVSGSTEKVLRVWD 196
>7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 510
Score = 51.2 bits (121), Expect = 3e-06
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 16/195 (8%)
Query: 137 IIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVAL 196
+I + + V ++D N E + + +H E L FN +G +++ S D ++A+
Sbjct: 262 VIISGSSDSTVRVWDVNTGEM----VNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAV 314
Query: 197 WDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSV 256
WD+TS + + + H VN +F + S D T+ + T+S ++ L+
Sbjct: 315 WDMTSPSEITLRRVLVGHRAAVNVV---DFDEKYIVSASGDRTIKVWSTSSCEFVRTLNG 371
Query: 257 SSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGL 316
+A + + L+ + +D+++ L+D+ L + GHE+ V + F +
Sbjct: 372 HK--RGIACLQYRDRLVVSGSSDNSIRLWDI-ECGACLRVLEGHEELVRCIRFDTKR--- 425
Query: 317 LTSSGSDRRIIMWDL 331
+ S D +I +WDL
Sbjct: 426 IVSGAYDGKIKVWDL 440
>CE11748 [R] KOG0266 WD40 repeat-containing protein
Length = 395
Score = 50.8 bits (120), Expect = 4e-06
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 168 HKENGYGLAFNPTVSGQLL-SASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEF 226
HK++ G+ F+P G+ + S S D ++ +W + K T H +N+ W
Sbjct: 106 HKKSISGIKFSP--DGRYMGSGSADCSIKIWRMDFVYEK----TLMGHRLGINEFSWSS- 158
Query: 227 QSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYD 286
S L + S+D + + D +S R ++ L + + S L+A+ D + ++
Sbjct: 159 DSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWC 218
Query: 287 LRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGS-DRRIIMWD 330
R + S+ GHED V+S+ F ++DG +SGS D + +WD
Sbjct: 219 ARN-GNTIFSIPGHEDPVSSVCF--NRDGAYLASGSYDGIVRIWD 260
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 50.8 bits (120), Expect = 4e-06
Identities = 46/172 (26%), Positives = 71/172 (40%), Gaps = 9/172 (5%)
Query: 161 AIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVND 220
AI S H + F+ + G + + + GT+ LWD+ +T H
Sbjct: 144 AILSLYGHSSGIDSVTFDAS-EGLVAAGAASGTIKLWDLEEA---KVVRTLTGHRSNCVS 199
Query: 221 CKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSS-AFNTLAFSKRSENLLAAAGTD 279
+H F F + S D L I D I + N L F+ + + G D
Sbjct: 200 VNFHPF-GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR-WIVSGGED 257
Query: 280 SNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
+ V ++DL K LH HE + SL+F PH + LL + +D+ + WDL
Sbjct: 258 NVVKVWDLTA-GKLLHEFKSHEGKIQSLDFHPH-EFLLATGSADKTVKFWDL 307
>7303631 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 680
Score = 50.8 bits (120), Expect = 4e-06
Identities = 49/193 (25%), Positives = 83/193 (42%), Gaps = 32/193 (16%)
Query: 152 RNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTF 211
R+ +EK H NG +G+L SA D + +W+ + +++ Q+
Sbjct: 20 RDAEEKQH----------RNGVNALQLDANNGKLYSAGRDAIIRVWNTRTDSSEKYIQSM 69
Query: 212 DVHTDIVND----CKWHEFQSSLFGTVSEDNTLIIHDTNSDRAIQKLSVSSAF-NTLAFS 266
+ H D VND C S+ S D T+ + + + L + LA++
Sbjct: 70 EHHNDWVNDIVLCCNGRNLISA-----SCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYA 124
Query: 267 KRSENLLAAAGTDSNVYLYDLRRLQK--------PLHSMAGHEDSVTSLEFSPHQDGLLT 318
K E +A+AG D ++L+D+ L S+ G +DS+ SL +P G +
Sbjct: 125 KDREQ-VASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNP--SGTVI 181
Query: 319 SSGSDRRII-MWD 330
SGS I+ +WD
Sbjct: 182 VSGSTENILRIWD 194
>7290520 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 478
Score = 50.8 bits (120), Expect = 4e-06
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 192 GTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTNSDRAI 251
G V +WDV ANK ++ + H+ V W+ S + + S D +I DT + +
Sbjct: 236 GYVTVWDVA--ANKQINK-LNGHSARVGALAWN---SDILSSGSRDRWIIQRDTRTPQLQ 289
Query: 252 QKLSVSSAFNTLAFSKRSEN--LLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEF 309
+ ++ + K S + LA+ G D+ +Y+++ + P+ S H +V ++ +
Sbjct: 290 SERRLAGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNQHSVN-PVQSYTEHMAAVKAIAW 348
Query: 310 SPHQDGLLTSSG--SDRRIIMWDLFNIGAEQQPDDAYDGVPEL-FMMHGGHRSPVNEFSH 366
SPH GLL S G +DR I W+ G Q D V L + H + +S
Sbjct: 349 SPHHHGLLASGGGTADRCIRFWNTLT-GQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQ 407
Query: 367 NSNVPW 372
N + W
Sbjct: 408 NQILVW 413
Score = 50.1 bits (118), Expect = 6e-06
Identities = 41/174 (23%), Positives = 74/174 (41%), Gaps = 7/174 (4%)
Query: 168 HKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQ 227
H++ GL ++P + L S +D + +W+ S +P Q++ H V W
Sbjct: 297 HRQEVCGLKWSPD-NQYLASGGNDNRLYVWNQHSV---NPVQSYTEHMAAVKAIAWSPHH 352
Query: 228 SSLF--GTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLY 285
L G + D + +T + + +Q + S LA+SK S L++ G N L
Sbjct: 353 HGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELVSTHGYSQNQILV 412
Query: 286 DLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIGAEQQ 339
+ + GH V L SP + ++T +G D + W++F+ Q+
Sbjct: 413 WKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAG-DETLRFWNVFSKARSQK 465
>YDR128w [S] KOG0309 Conserved WD40 repeat-containing protein
Length = 1148
Score = 50.4 bits (119), Expect = 5e-06
Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 185 LLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHD 244
++S S+ + +W++ +++ + H+ + D ++ + T S D + D
Sbjct: 85 IVSTSNQKAI-IWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWD 143
Query: 245 TNSDRA--IQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHED 302
S S SA + + ++ + N+LA++ ++++++DLR+ PL S+ GH
Sbjct: 144 MRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSH-GNDIFVWDLRKGSTPLCSLKGHVS 202
Query: 303 SVTSLEFSPHQDGLLTSSGSDRRIIMWD 330
SV S++F+ + + SS +D + WD
Sbjct: 203 SVNSIDFNRFKYSEIMSSSNDGTVKFWD 230
>At1g20540 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily
Length = 379
Score = 50.4 bits (119), Expect = 5e-06
Identities = 27/131 (20%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 265 FSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDR 324
++ + E++L A +S ++++DLR+ + P+ + GH ++ +P DGL+ S+G+D
Sbjct: 244 YNPKREHILVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDS 303
Query: 325 RIIMWDLFNIGAEQQPDDA-----YDGVPELFMMHGGHRSPVNEFSHNSNVPWLMCSVEE 379
+ +W ++ + ++ V L + + V + +S PW+ S+
Sbjct: 304 VVNLWYASATSSDDKTSESPVESTRQRVNPLLNSYTDYEDSVYGLAWSSREPWVFASLSY 363
Query: 380 EN--VLQIWKP 388
+ +++ KP
Sbjct: 364 DGRVIIESVKP 374
>SPBC428.19c [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 494
Score = 50.1 bits (118), Expect = 6e-06
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 12/191 (6%)
Query: 142 NGAGIVYIFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTS 201
+ G+V IFD + + + + H+ + F P + LS SDD TV +WD+++
Sbjct: 100 DATGLVQIFDLSTRS----ILRALDAHQFPVHVTQFCPYANTTFLSGSDDKTVKVWDLST 155
Query: 202 TANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHDTN-SDRAIQKLSVSSAF 260
A H D V W + G D T+ + DT +D + S A
Sbjct: 156 GA---VQYDLSGHEDYVRTASWMSATRLVSG--GYDGTIRLWDTRIADPEVMSFSHGEAI 210
Query: 261 NTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSS 320
+ + + +++A G V+ R Q P ++ H+ S+T L + LL S
Sbjct: 211 DVVLPMQSGSTVISAGGPSIKVWDLVAGR-QTPTKKLSNHQKSITCLAMNSENTRLL-SG 268
Query: 321 GSDRRIIMWDL 331
G D + ++++
Sbjct: 269 GLDGHVKIYNI 279
>At2g32700 [R] KOG0266 WD40 repeat-containing protein
Length = 787
Score = 50.1 bits (118), Expect = 6e-06
Identities = 41/155 (26%), Positives = 73/155 (46%), Gaps = 9/155 (5%)
Query: 177 FNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSE 236
F P S QL ++S D T+ +WD + +T H V +H ++ L +
Sbjct: 560 FRPN-STQLATSSFDKTIKIWDASDPGYFL--RTISGHAAPVMSIDFHPKKTELLCSCDS 616
Query: 237 DNTLIIHDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHS 296
+N + D N+ +V A + F R+ LAAA +++ V ++D+ K ++
Sbjct: 617 NNDIRFWDINASCV---RAVKGASTQVRFQPRTGQFLAAA-SENTVSIFDIENNNKRVNI 672
Query: 297 MAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
GH +V S+ +SP +G L +S S+ + +W L
Sbjct: 673 FKGHSSNVHSVCWSP--NGELVASVSEDAVKLWSL 705
>At1g12910 [S] KOG0290 Conserved WD40 repeat-containing protein AN11
Length = 346
Score = 50.1 bits (118), Expect = 6e-06
Identities = 59/279 (21%), Positives = 117/279 (41%), Gaps = 37/279 (13%)
Query: 69 TLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFKHEQEVTRA 128
T + PN ++I +D S P++S F+H T+
Sbjct: 48 TSLLEQYPNRVEIVQLDESNGEIRSDPNLS--------------------FEHPYPPTKT 87
Query: 129 RYMP----QSPNIIATLNGAGIVY-IFDRNIKEKDHGAIASFSYHKENGYGLAF--NPTV 181
++P Q P+++AT + ++ I D + + + + S + G +F N
Sbjct: 88 IFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNSEFCGPLTSFDWNEAE 147
Query: 182 SGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLI 241
++ ++S D T +WD+ A + H V D W +F +VS D ++
Sbjct: 148 PRRIGTSSTDTTCTIWDIEREAVDTQ---LIAHDKEVFDIAWGGV--GVFASVSADGSVR 202
Query: 242 IHDTNSDRAIQKLSVSSAFNT----LAFSKRSENLLAAAGTDS-NVYLYDLRRLQKPLHS 296
+ D + SS +T L ++K+ +A DS V + D+R P+
Sbjct: 203 VFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPALPVVE 262
Query: 297 MAGHEDSVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNIG 335
+ H+ SV ++ ++PH + ++G D + ++WD+ ++G
Sbjct: 263 LQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMG 301
>Hs7705377 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 496
Score = 49.7 bits (117), Expect = 8e-06
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 7/187 (3%)
Query: 149 IFDRNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPS 208
I R+I+ + H++ GL ++ T L S +D + +W+ +S SP
Sbjct: 293 ILQRDIRTPPLQSERRLQGHRQEVCGLKWS-TDHHLLASGGNDNKLLVWNHSSL---SPV 348
Query: 209 QTFDVHTDIVNDCKWHEFQSSLF--GTVSEDNTLIIHDTNSDRAIQKLSVSSAFNTLAFS 266
Q + H V W Q L G + D + +T + + +Q + S LA+S
Sbjct: 349 QQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWS 408
Query: 267 KRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDSVTSLEFSPHQDGLLTSSGSDRRI 326
K + L++ G N L + + GH V L SP + ++T +G D +
Sbjct: 409 KHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAG-DETL 467
Query: 327 IMWDLFN 333
W++F+
Sbjct: 468 RFWNVFS 474
>Hs21687048 [T] KOG0279 G protein beta subunit-like protein
Length = 366
Score = 49.7 bits (117), Expect = 8e-06
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 18/225 (8%)
Query: 115 IVRKFK-HEQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKENGY 173
+V++FK HE E+T+ +P+S + +V ++D + + + H
Sbjct: 94 VVKRFKGHEHEITKVACIPKSSQFFSASRDR-MVMMWDLHGSSQPRQQLCG---HAMVVT 149
Query: 174 GLAFNPTVSGQLLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGT 233
GLA +P S QL + S D T+ LWDV + + + V ++V W + + T
Sbjct: 150 GLAVSPD-SSQLCTGSRDNTLLLWDVVTGQSVERAS---VSRNVVTHLCWVPREPYILQT 205
Query: 234 VSEDNTLIIHDTNSDRAIQKLSVSSAFNTLA-FSKRSENLLAAA----GTDSNVYLYDLR 288
SED TL + D+ + T S ++ + G L+DLR
Sbjct: 206 -SEDKTLRLWDSRGLQVAHMFPAKQHIQTYCEVSVDGHKCISCSNGFGGEGCEATLWDLR 264
Query: 289 RLQKPLHSMAGHEDSVTSLEFSPHQDG---LLTSSGSDRRIIMWD 330
+ + + GH +V S F P L+ +S D ++ +W+
Sbjct: 265 QTRNRICEYKGHFQTVASCVFLPRALALMPLIATSSHDCKVKIWN 309
>CE29560 [S] KOG0300 WD40 repeat-containing protein
Length = 486
Score = 49.7 bits (117), Expect = 8e-06
Identities = 51/212 (24%), Positives = 83/212 (39%), Gaps = 28/212 (13%)
Query: 132 PQSPNIIATLNGAGIVYIFD--RNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSAS 189
P S ++AT +G +I+ N DH + +H++ L
Sbjct: 204 PASGLLLATASGDESTHIWKVPSNNAPSDHSSEEEEEHHRDPNNLL-------------- 249
Query: 190 DDGTVALWDVTSTANKSPSQTFDV-------HTDIVNDCKWHEFQSSLFGTVSEDNTLII 242
G V TS++ KS V H V+ C+W + T S D T +
Sbjct: 250 --GVVEHNRFTSSSEKSDGHRIRVPVMRLTGHRAPVSCCEWLAGGQQMV-TASWDRTANV 306
Query: 243 HDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHED 302
D + LS + + ++ L+ + DS L+D R + + GH+D
Sbjct: 307 WDVEKGEVVNILSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFREAIQSVAVFQGHQD 366
Query: 303 SVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNI 334
SVTS+ F + D + SS D + +WDL N+
Sbjct: 367 SVTSVSF--NTDYRIVSSSDDATVKIWDLRNM 396
>CE26861 [S] KOG0300 WD40 repeat-containing protein
Length = 484
Score = 49.7 bits (117), Expect = 8e-06
Identities = 51/212 (24%), Positives = 83/212 (39%), Gaps = 28/212 (13%)
Query: 132 PQSPNIIATLNGAGIVYIFD--RNIKEKDHGAIASFSYHKENGYGLAFNPTVSGQLLSAS 189
P S ++AT +G +I+ N DH + +H++ L
Sbjct: 202 PASGLLLATASGDESTHIWKVPSNNAPSDHSSEEEEEHHRDPNNLL-------------- 247
Query: 190 DDGTVALWDVTSTANKSPSQTFDV-------HTDIVNDCKWHEFQSSLFGTVSEDNTLII 242
G V TS++ KS V H V+ C+W + T S D T +
Sbjct: 248 --GVVEHNRFTSSSEKSDGHRIRVPVMRLTGHRAPVSCCEWLAGGQQMV-TASWDRTANV 304
Query: 243 HDTNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHED 302
D + LS + + ++ L+ + DS L+D R + + GH+D
Sbjct: 305 WDVEKGEVVNILSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFREAIQSVAVFQGHQD 364
Query: 303 SVTSLEFSPHQDGLLTSSGSDRRIIMWDLFNI 334
SVTS+ F + D + SS D + +WDL N+
Sbjct: 365 SVTSVSF--NTDYRIVSSSDDATVKIWDLRNM 394
>At4g11920 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 482
Score = 49.7 bits (117), Expect = 8e-06
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 185 LLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHD 244
L + GTV +WDV N +T + H V W SS+ + S D +++ D
Sbjct: 238 LAIGTSSGTVQIWDVLRCKN---IRTMEGHRLRVGALAW---SSSVLSSGSRDKSILQRD 291
Query: 245 --TNSDRAIQKLSVSSAFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHED 302
T D + S L +S + L A+ G D+ +++++ Q P+ H
Sbjct: 292 IRTQEDHVSKLKGHKSEICGLKWSSDNREL-ASGGNDNKLFVWNQHSTQ-PVLRFCEHAA 349
Query: 303 SVTSLEFSPHQDGLLTSSG--SDRRIIMWD 330
+V ++ +SPH GLL S G +DR I W+
Sbjct: 350 AVKAIAWSPHHFGLLASGGGTADRCIRFWN 379
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 49.7 bits (117), Expect = 8e-06
Identities = 41/148 (27%), Positives = 67/148 (44%), Gaps = 8/148 (5%)
Query: 185 LLSASDDGTVALWDVTSTANKSPSQTFDVHTDIVNDCKWHEFQSSLFGTVSEDNTLIIHD 244
+L+ + G + LWD+ + + F H + ++H F L + S D L + D
Sbjct: 22 VLAGASSGVIKLWDLEES---KMVRAFTGHRSNCSAVEFHPFGEFL-ASGSSDTNLRVWD 77
Query: 245 TNSDRAIQKLSVSS-AFNTLAFSKRSENLLAAAGTDSNVYLYDLRRLQKPLHSMAGHEDS 303
T IQ + +T+ FS + + G D+ V ++DL K LH HE
Sbjct: 78 TRKKGCIQTYKGHTRGISTIEFSPDGR-WVVSGGLDNVVKVWDLTA-GKLLHEFKCHEGP 135
Query: 304 VTSLEFSPHQDGLLTSSGSDRRIIMWDL 331
+ SL+F P + LL + +DR + WDL
Sbjct: 136 IRSLDFHP-LEFLLATGSADRTVKFWDL 162
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,423,254
Number of Sequences: 60738
Number of extensions: 1165991
Number of successful extensions: 4818
Number of sequences better than 1.0e-05: 123
Number of HSP's better than 0.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 4156
Number of HSP's gapped (non-prelim): 335
length of query: 408
length of database: 30,389,216
effective HSP length: 109
effective length of query: 299
effective length of database: 23,768,774
effective search space: 7106863426
effective search space used: 7106863426
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)