ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV0435 good E KOG1579 Amino acid transport and metabolism Homocysteine S-methyltransferase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV0435 138960 137968 -331
(331 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL273w [E] KOG1579 Homocysteine S-methyltransferase 491 e-139
YLL062c [E] KOG1579 Homocysteine S-methyltransferase 421 e-118
YMR321c [E] KOG1579 Homocysteine S-methyltransferase 146 4e-35
At3g22740 [E] KOG1579 Homocysteine S-methyltransferase 114 3e-25
At3g25900 [E] KOG1579 Homocysteine S-methyltransferase 110 4e-24
7298506 [E] KOG1579 Homocysteine S-methyltransferase 100 4e-21
At3g63250 [E] KOG1579 Homocysteine S-methyltransferase 99 1e-20
7298507 [E] KOG1579 Homocysteine S-methyltransferase 87 3e-17
SPAC57A7.07c [E] KOG1579 Homocysteine S-methyltransferase 64 3e-10
CE25997 [E] KOG1579 Homocysteine S-methyltransferase 61 3e-09
Hs4557765_1 [E] KOG1579 Homocysteine S-methyltransferase 50 6e-06
>YPL273w [E] KOG1579 Homocysteine S-methyltransferase
Length = 325
Score = 491 bits (1264), Expect = e-139
Identities = 224/322 (69%), Positives = 274/322 (84%)
Query: 2 RVPIKKYFEENPDVVLVMDGGQGTELENRGINVANPVWSTVPFINESFWSSDASKDRIIV 61
R+P+K++ +NP VLV+DGGQGTELENRGI VANPVWST+PFI+ESFWS ++S +R IV
Sbjct: 3 RLPLKQFLADNPKKVLVLDGGQGTELENRGIKVANPVWSTIPFISESFWSDESSANRKIV 62
Query: 62 KQMFEDFIEAGADILMTITYQTSFKSVSENTPIRTLEEYNGLLDRIVSFSRSCIGEDRYL 121
K+MF DF+ AGA+ILMT TYQTS+KSVSENTPIRTL EYN LL+RIV FSR+CIGED+YL
Sbjct: 63 KEMFNDFLNAGAEILMTTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFSRNCIGEDKYL 122
Query: 122 IGCIGAWGAHVCSEFTGDYGPHPDQIDYFEYFRPQLGNFVQSKDIDIIGFETIPNIHELR 181
IGCIG WGAH+C EFTGDYG P+ ID+++YF+PQL NF ++ +D+IGFETIPNIHEL+
Sbjct: 123 IGCIGPWGAHICREFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFETIPNIHELK 182
Query: 182 AILSWDETVLSKPFYIGLSVHEYGVLRDGTSMQQIADLISSLGDKLNSNLMFIGINCCAF 241
AILSWDE++LS+PFYIGLSVHE+GVLRDGT+M++IA +I LGDK+N N F+GINC +F
Sbjct: 183 AILSWDESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNFSFLGINCVSF 242
Query: 242 NQSHMILESLHNSCPNMPLIVYPNSGEIYDTVKKIWLKNENQLCTWDDVVKSYIENGARI 301
NQS ILESLH + PNM L+ YPNSGE+YDT KKIWL N ++L +WD VVK YI +GARI
Sbjct: 243 NQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSDKLNSWDTVVKQYISSGARI 302
Query: 302 IGGCCRTTVDDIKEVRLAVNKY 323
IGGCCRT+ DI+E+ AV KY
Sbjct: 303 IGGCCRTSPKDIQEISAAVKKY 324
>YLL062c [E] KOG1579 Homocysteine S-methyltransferase
Length = 324
Score = 421 bits (1083), Expect = e-118
Identities = 193/323 (59%), Positives = 256/323 (78%), Gaps = 1/323 (0%)
Query: 2 RVPIKKYFEENPDVVLVMDGGQGTELENRGINVANPVWSTVPFINESFWSSDASKDRIIV 61
R+PIK+ E+P VL++DGGQGTELENRGIN+ +PVWS PF +ESFW +S++R +V
Sbjct: 3 RIPIKELIVEHPGKVLILDGGQGTELENRGININSPVWSAAPFTSESFWEP-SSQERKVV 61
Query: 62 KQMFEDFIEAGADILMTITYQTSFKSVSENTPIRTLEEYNGLLDRIVSFSRSCIGEDRYL 121
++M+ DF+ AGA+ILMTITYQ +F+S+SENT I+TL Y LD+IVSF+R IGE+RYL
Sbjct: 62 EEMYRDFMIAGANILMTITYQANFQSISENTSIKTLAAYKRFLDKIVSFTREFIGEERYL 121
Query: 122 IGCIGAWGAHVCSEFTGDYGPHPDQIDYFEYFRPQLGNFVQSKDIDIIGFETIPNIHELR 181
IG IG W AHV E+TGDYGPHP+ IDY+ +F+PQL NF Q++DID+IGFETIPN HEL+
Sbjct: 122 IGSIGPWAAHVSCEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLIGFETIPNFHELK 181
Query: 182 AILSWDETVLSKPFYIGLSVHEYGVLRDGTSMQQIADLISSLGDKLNSNLMFIGINCCAF 241
AILSWDE ++SKPFYIGLSV + +LRDGT++++I+ I LG+K+N NL+ +G+NC +F
Sbjct: 182 AILSWDEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKINKNLLLMGVNCVSF 241
Query: 242 NQSHMILESLHNSCPNMPLIVYPNSGEIYDTVKKIWLKNENQLCTWDDVVKSYIENGARI 301
NQS +IL+ LH P MPL+VYPNSGEIY+ +K W + N+L W+ VK +++NGARI
Sbjct: 242 NQSALILKMLHEHLPGMPLLVYPNSGEIYNPKEKTWHRPTNKLDDWETTVKKFVDNGARI 301
Query: 302 IGGCCRTTVDDIKEVRLAVNKYA 324
IGGCCRT+ DI E+ AV+KY+
Sbjct: 302 IGGCCRTSPKDIAEIASAVDKYS 324
>YMR321c [E] KOG1579 Homocysteine S-methyltransferase
Length = 105
Score = 146 bits (369), Expect = 4e-35
Identities = 67/101 (66%), Positives = 80/101 (78%)
Query: 223 LGDKLNSNLMFIGINCCAFNQSHMILESLHNSCPNMPLIVYPNSGEIYDTVKKIWLKNEN 282
LGDK+N NL F+GINC +FNQS ILESLH + PNM L+ YPNSGE+YDT KKIWL N +
Sbjct: 4 LGDKINPNLSFLGINCVSFNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSD 63
Query: 283 QLCTWDDVVKSYIENGARIIGGCCRTTVDDIKEVRLAVNKY 323
+L +WD VVK YI +GARIIGGCCRT+ DI+E+ AV KY
Sbjct: 64 KLNSWDTVVKQYISSGARIIGGCCRTSPKDIQEISAAVKKY 104
>At3g22740 [E] KOG1579 Homocysteine S-methyltransferase
Length = 349
Score = 114 bits (284), Expect = 3e-25
Identities = 91/325 (28%), Positives = 160/325 (49%), Gaps = 44/325 (13%)
Query: 18 VMDGGQGTELENRGINVANPVWSTVPFINESFWSSDASKDRIIVKQMFEDFIEAGADILM 77
V+DGG TEL+ G ++ +P+WS I +V ++ D++E+GA+I++
Sbjct: 25 VVDGGFATELQRHGADINDPLWSAKCLITSPH----------LVTKVHLDYLESGANIII 74
Query: 78 TITYQTSFKSV---------SENTPIRTLEE--------YNGLLDRIVSFSRSCIGEDRY 120
T +YQ + + +EN R++E YN F+ + R
Sbjct: 75 TASYQATIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRP 134
Query: 121 LI--GCIGAWGAHVC--SEFTGDYGPHPDQIDYFEYFRPQLGNFVQSKDIDIIGFETIPN 176
++ +G++GA++ SE++G YG + ++ R ++ +S D+I FETIPN
Sbjct: 135 ILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKS-GADLIAFETIPN 193
Query: 177 IHELRAILSW-DETVLSKPFYIGLSVHEYGVLRDGTSMQQIADLISSLGDKLNSNLMFIG 235
E A +E + P + + + + G S+ + A + S N++ IG
Sbjct: 194 KLEAEAYADLLEEEDIDIPAWFSFTSKDGVSVPRGDSVVECAKVADSC-----KNVVAIG 248
Query: 236 INCCAFNQSHMILESLHNSCPNMPLIVYPNSGEIYDTVKKIWLKNENQLCTWDDVVKSYI 295
INC A H ++ SL P++VYPNSGE+YD + K W+ ++++ + +D V SY+
Sbjct: 249 INCTAPRYIHALIISLRQMT-RKPIVVYPNSGEVYDGLNKKWIVSKSEGESEEDFV-SYV 306
Query: 296 ----ENGARIIGGCCRTTVDDIKEV 316
+ GA + GGCCRTT + I+ +
Sbjct: 307 SKWRDAGASLFGGCCRTTPNTIRAI 331
>At3g25900 [E] KOG1579 Homocysteine S-methyltransferase
Length = 326
Score = 110 bits (274), Expect = 4e-24
Identities = 89/325 (27%), Positives = 157/325 (47%), Gaps = 53/325 (16%)
Query: 18 VMDGGQGTELENRGINVANPVWSTVPFINESFWSSDASKDRIIVKQMFEDFIEAGADILM 77
V+DGG T+LE G + +P+WS V I K+ ++K++ +++EAGADI++
Sbjct: 22 VVDGGFATQLEIHGAAINDPLWSAVSLI----------KNPELIKRVHMEYLEAGADIVV 71
Query: 78 TITYQTSFKSVSENTPIRTLEEYNGLLDRIVSFSRSCIGEDRY----------------L 121
T +YQ + ++EE LL + V + DR+ +
Sbjct: 72 TSSYQATIPGFLSRG--LSIEESESLLQKSVELAVEA--RDRFWEKVSKVSGHSYNRALV 127
Query: 122 IGCIGAWGAHVC--SEFTGDYGPHPDQIDYFEYFRPQLGNFVQSKDIDIIGFETIPNIHE 179
IG++GA++ SE++G YG + ++ R +L V++ D++ FETIPN E
Sbjct: 128 AASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGP-DLLAFETIPNKLE 186
Query: 180 LRAILSW-DETVLSKPFYIGLSVHEYGVLRDGTSMQQIADLISSLGDKLNSNLMFIGINC 238
+A + +E + P +I + + G S ++ + ++ ++N+ +GINC
Sbjct: 187 AQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNK-----SNNIYAVGINC 241
Query: 239 CAFNQSHMILESLHNSCPNMP---LIVYPNSGEIYDTVKKIWLKNENQLCTWDDVVKSYI 295
+E+L + ++VYPNSGE++D K WL ++ C DD + +
Sbjct: 242 AP----PQFIENLIRKFAKLTKKAIVVYPNSGEVWDGKAKQWLPSQ---CFGDDEFEMFA 294
Query: 296 ----ENGARIIGGCCRTTVDDIKEV 316
+ GA++IGGCCRTT I +
Sbjct: 295 TKWRDLGAKLIGGCCRTTPSTINAI 319
>7298506 [E] KOG1579 Homocysteine S-methyltransferase
Length = 331
Score = 100 bits (248), Expect = 4e-21
Identities = 94/337 (27%), Positives = 156/337 (45%), Gaps = 43/337 (12%)
Query: 16 VLVMDGGQGTELE-NRGINV-ANPVWSTVPFINESFWSSDASKDRIIVKQMFEDFIEAGA 73
VLV DGG GT++ + G +V +P+WS +A+ I+ DF++ GA
Sbjct: 6 VLVKDGGFGTQMTVHVGDSVDGDPLWSA---------RFNATNPAAIISTHL-DFLQNGA 55
Query: 74 DILMTITYQTSFKSVSENTPIRTLEEYNGLLDRIVSFSRSCIGEDRYLIGC--------- 124
DI++T TYQ+S E + E+ L+ V + I ++RYL C
Sbjct: 56 DIILTNTYQSSVDGYMEYLELDE-EQSIELIKNTVRLAH--IAKERYLTECYQAQLSVQE 112
Query: 125 --------IGAWGAHVC--SEFTGDYGPHPDQIDYFEYFRPQLGNFVQSKDIDIIGFETI 174
IG +GAH+ SE+TG Y + ++ R ++ +++ +D + ETI
Sbjct: 113 GYPLIIASIGPFGAHLHDGSEYTGSYADFVPAKEITDWHRVRIEACLEA-GVDALAIETI 171
Query: 175 PNIHELRAILSW-DETVLSKPFYIGLSVHEYGVLRDGTSMQQIADLISSLGDKLNSN--L 231
P E A++ + F++ + L G + A+ I L + N+
Sbjct: 172 PCQMEAEALVEMLCDDYPDVKFWVAFQCKDENTLAHGETFADAANAIWDLLAERNAQDKC 231
Query: 232 MFIGINCCAFNQSHMILESLHNSCP---NMPLIVYPNSGEIYDTVKKIWLKNENQLCTWD 288
+ IG+NC + +SL+ +PL+VYPNSGE+YD V W E+ +
Sbjct: 232 LAIGVNCVHPKFVTPLFKSLNGDREVGEQIPLVVYPNSGEVYDVVNG-WQGREHCV-PLA 289
Query: 289 DVVKSYIENGARIIGGCCRTTVDDIKEVRLAVNKYAK 325
+ V + + GA++IGGCCRT DI+ + A+ + K
Sbjct: 290 NYVPEWAQLGAKVIGGCCRTYARDIRHIGEAIRDWNK 326
>At3g63250 [E] KOG1579 Homocysteine S-methyltransferase
Length = 333
Score = 98.6 bits (244), Expect = 1e-20
Identities = 87/327 (26%), Positives = 149/327 (44%), Gaps = 52/327 (15%)
Query: 18 VMDGGQGTELENRGINVANPVWSTVPFINESFWSSDASKDRIIVKQMFEDFIEAGADILM 77
V+DGG TE E G ++ +P+WS + ++ + D++EAGADI+
Sbjct: 21 VIDGGLATEFERHGADLNDPLWSAKCLVTSPH----------LIHTVHLDYLEAGADIIS 70
Query: 78 TITYQTSFKSVSENTPIRTLEEYNGLLDRIVSFSR------------SCIGEDRYL---- 121
+ +YQ + + R EE LL + V + S +D+ L
Sbjct: 71 SASYQATIQGFEAKGFSR--EESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRP 128
Query: 122 ---IGCIGAWGAHVC--SEFTGDYGPHPDQIDYFEYFRPQLGNFVQSKDIDIIGFETIPN 176
+G++GA++ SE++G YG ++ R +L +S D+I FETIPN
Sbjct: 129 ILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAES-GADLIAFETIPN 187
Query: 177 IHELRAILSW-DETVLSKPFYIGLSVHEYGVLRDGTSMQQIADLISSLGDKLNSNLMFIG 235
E +A +E + P + + + + G S+++ + + ++ +G
Sbjct: 188 KIEAQAFADLLEEGDVKIPGWFSFNSKDGVNVVSGDSIKECISIAENC-----EKVVAVG 242
Query: 236 INCCA--FNQSHMILESLHNSCPNMPLIVYPNSGEIYDTVKKIWLKNENQLCTWDDVVKS 293
INC F + ++LE + P++VYPNSGE YD +K W++N D+ S
Sbjct: 243 INCTPPRFIEG-LVLEI--EKVTSKPILVYPNSGESYDADRKEWVENTG---VGDEDFVS 296
Query: 294 YIEN----GARIIGGCCRTTVDDIKEV 316
Y+E G ++GGCCRTT I+ +
Sbjct: 297 YVEKWMDAGVSLLGGCCRTTPTTIRAI 323
>7298507 [E] KOG1579 Homocysteine S-methyltransferase
Length = 331
Score = 87.4 bits (215), Expect = 3e-17
Identities = 90/332 (27%), Positives = 148/332 (44%), Gaps = 46/332 (13%)
Query: 16 VLVMDGGQGTELENRGINVANPVWSTVPFINESFWSS--DASKDRIIVKQMFEDFIEAGA 73
+LV GG ++L NV V + W S DA+ ++ Q DF+ GA
Sbjct: 14 ILVKCGGFSSQLAK---NVTEKV------DGDPLWGSRFDATNPEAVI-QTHLDFLRNGA 63
Query: 74 DILMTITYQTSFKSVSENTPIRTLEEYNGLLDRIVSFSRSC-------IGEDR-----YL 121
DI++T TYQ+S + + + T E L+ + V ++ IG + +
Sbjct: 64 DIILTNTYQSSVEGFVKYLGV-TRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLI 122
Query: 122 IGCIGAWGA--HVCSEFTGDYGPHPDQIDYFEYFRPQLGNFVQSKDIDIIGFETIPNIHE 179
+G IG +GA H SE+TG+Y + + + + ++ + +D + ET+P + E
Sbjct: 123 MGSIGPYGAYLHDGSEYTGNYADKMSKEELRAWHKTRI-EICLAAGVDGLALETLPCLME 181
Query: 180 LRAILSWDETVLSK----PFYIGLSVHEYGVLRDGTSMQQIADLISSL--GDKLNSNLMF 233
A+ E VL F++ L + + G + + A + L K + L+
Sbjct: 182 AEAVT---ELVLDNFPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLG 238
Query: 234 IGINCCAFNQSHMILESLHN--SCPNMPLIVYPNSGEIYDTVKKIWLKNENQLCTWDDVV 291
IG+NC +L SL +PL+VY N GEIYD + W ++ + V
Sbjct: 239 IGLNCVNPLFVTPLLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEEVVKF---V 295
Query: 292 KSYIENGARIIGGCCRTTVDDIKEVRLAVNKY 323
+I+ G RI+GGCCR D+ LA+ KY
Sbjct: 296 PEWIQLGVRIVGGCCRVYPTDV----LAIRKY 323
>SPAC57A7.07c [E] KOG1579 Homocysteine S-methyltransferase
Length = 308
Score = 63.9 bits (154), Expect = 3e-10
Identities = 69/294 (23%), Positives = 128/294 (43%), Gaps = 29/294 (9%)
Query: 45 INES-FWSSDA--SKDRIIVKQMFEDFIEAGADILMTITYQTSFKSVSENTPIRTLEEYN 101
I+ES W+S+A I+VK E+F++ DI+ T TYQ E L++
Sbjct: 19 ISESRLWTSEALVRYPEIVVKH-HEEFLKV-CDIISTFTYQLDASIYDEKVEGVPLKQVY 76
Query: 102 GLLDRIVSFSRSCIG-EDRYLIGCIGAWGAHV--CSEFTGDYGPHPDQIDYFEYFRP--- 155
+ ++R +G ++Y+ C+G+ A + C E+ Y D + + +
Sbjct: 77 ANSIGLPVYAREHLGLPNKYIALCLGSHAATIPGCMEYKMIYDKPTDFEMLYNFHKNRIE 136
Query: 156 --QLGNFVQSKDIDIIGFETIPNIHELRAI--LSWDETVLSKPFYIGLSVHEYGVLRDGT 211
Q N + ID I FE++P++ E + L D SK +I + E +
Sbjct: 137 AIQASNPKAFEKIDFIAFESLPHVTEAEVVCQLIQDMKGWSKRCWITCTCPER------S 190
Query: 212 SMQQIADLISSLGDKLNSNLMFIGINCCAFNQSHMILESLHNSCP-NMPLIVYPNSGEIY 270
++++++ +IS + + ++ IG+NC + I + L + P N+ I+YP+ +Y
Sbjct: 191 TIERVSSIISKILSINHDSIWGIGVNCFHLSLLEPIAKMLSSLLPSNITAILYPDGRGLY 250
Query: 271 DTVKKIWLKNENQLCT-----WDDVVKSY--IENGARIIGGCCRTTVDDIKEVR 317
+ W + Y + NG I+GGCC T + + +R
Sbjct: 251 QNPDGTFSPGSTDHPAPSPEEWSTITAKYSNLHNGNLILGGCCETNYNHLSLLR 304
>CE25997 [E] KOG1579 Homocysteine S-methyltransferase
Length = 334
Score = 60.8 bits (146), Expect = 3e-09
Identities = 67/271 (24%), Positives = 115/271 (41%), Gaps = 41/271 (15%)
Query: 15 VVLVMDGGQGTELENRGINVANPVWSTVPFINESFWSSDASKDRIIVKQMFEDFIEAGAD 74
+V ++DG ++L G + N+ WS A+ D +++ +++ F++
Sbjct: 65 MVRLLDGSMSSQLLRFGYDCNQQE-------NKPHWSFPANADMELMENVYKSFLDLEVK 117
Query: 75 ILMTITY---QTSFKSVSENTPIRTL-EEYNGLLDRIVSFSRSCIGEDRYLIGC--IGAW 128
++ + TY T K++ EN R L E+Y F +C+ G + AW
Sbjct: 118 VITSNTYHFGSTLDKTIPENAEKRELYEKY---------FEETCLKLCHLTTGSSDVEAW 168
Query: 129 GA--------HVCSEFTGDYGPHPD-QIDYFEYFRPQLGNFVQSKDIDIIGFETIPNIHE 179
G+ H SE+TG Y + + ++YF+ L F I + FETIP+ E
Sbjct: 169 GSVGTLATMYHDLSEYTGAYMDQSEAKKTAYDYFKIILTLFHNRSSIRKLIFETIPSADE 228
Query: 180 LRAILSWDETVLSKPFYIGLSVHEYGVLRDGTSMQQIADLISSLGDKLNSNLMFIGINCC 239
L + I + E+G LR G + +A + K + ++ IGINC
Sbjct: 229 GSVALDVLQEFPEFEAVISFTFKEHGCLRHGEKITSVAQQM-----KQSPQVLGIGINCT 283
Query: 240 AFNQSHMILESLHNSCP--NMPLIVYPNSGE 268
N +L +L+ P + VYPN G+
Sbjct: 284 DPNN---VLPALNELQPFAFSEVFVYPNKGD 311
>Hs4557765_1 [E] KOG1579 Homocysteine S-methyltransferase
Length = 350
Score = 49.7 bits (117), Expect = 6e-06
Identities = 71/333 (21%), Positives = 132/333 (39%), Gaps = 52/333 (15%)
Query: 16 VLVMDGGQGTELENRGINVANPVWSTV-----PFINESFWSSDASKDRIIVKQMFEDFIE 70
++V+DGG GT ++ +N + P + S D ++ Q+ ++++
Sbjct: 30 IMVLDGGMGTMIQREKLNEEHFRGQEFKDHARPLKGNNDILSITQPD--VIYQIHKEYLL 87
Query: 71 AGADILMTITYQTSFKSVS----ENTPIRTLEEYNGLLDRIVSFSRSCIGEDRYLIGCIG 126
AGADI+ T T+ ++ + + E+ R G+ + G R++ G +G
Sbjct: 88 AGADIIETNTFSSTSIAQADYGLEHLAYRMNMCSAGVARKAAEEVTLQTGIKRFVAGALG 147
Query: 127 AWGAHVCSEFTGDYGPHPDQIDYFEYFRPQLGNFVQSK-------DIDIIGFETIPNIHE 179
+ T P ++ DY +L Q + +DI+ ETI +
Sbjct: 148 P------TNKTLSVSPSVERPDYRNITFDELVEAYQEQAKGLLDGGVDILLIETIFDTAN 201
Query: 180 LRAILS-----WDETVLSKPFYI-GLSVHEYGVLRDGTSMQQIADLISSLGDKLNSNLMF 233
+A L ++E +P +I G V + G G + + +S + ++
Sbjct: 202 AKAALFALQNLFEEKYAPRPIFISGTIVDKSGRTLSGQTGEGFVISVS------HGEPLY 255
Query: 234 IGINCCAFNQSHMILESLHNSCPNMPLIVYPNSG-----EIYDTVKKIWLKNENQLCTWD 288
IG+NC + C ++ YPN+G YD + K+
Sbjct: 256 IGLNCALGAAEMRPFIEIIGKCTTAYVLCYPNAGLPNTFGDYDETPSMMAKH-------- 307
Query: 289 DVVKSYIENG-ARIIGGCCRTTVDDIKEVRLAV 320
+K + +G I+GGCC +T D I+E+ AV
Sbjct: 308 --LKDFAMDGLVNIVGGCCGSTPDHIREIAEAV 338
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.138 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,952,597
Number of Sequences: 60738
Number of extensions: 925887
Number of successful extensions: 2153
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2126
Number of HSP's gapped (non-prelim): 11
length of query: 331
length of database: 30,389,216
effective HSP length: 107
effective length of query: 224
effective length of database: 23,890,250
effective search space: 5351416000
effective search space used: 5351416000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)