ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV0581 good R KOG0927 General function prediction only Predicted transporter (ABC superfamily)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV0581 186085 184523 -521
(521 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR061w [R] KOG0927 Predicted transporter (ABC superfamily) 616 e-176
SPAC323.04 [R] KOG0927 Predicted transporter (ABC superfamily) 193 6e-49
YER036c [R] KOG0927 Predicted transporter (ABC superfamily) 67 9e-11
SPBC16H5.08c [R] KOG0927 Predicted transporter (ABC superfamily) 65 2e-10
At5g09930 [R] KOG0927 Predicted transporter (ABC superfamily) 60 1e-08
At5g64840 [R] KOG0927 Predicted transporter (ABC superfamily) 55 2e-07
CE28355 [U] KOG0058 Peptide exporter ABC superfamily 52 2e-06
CE07240 [U] KOG0058 Peptide exporter ABC superfamily 52 2e-06
At5g60790 [R] KOG0927 Predicted transporter (ABC superfamily) 52 2e-06
CE29212 [Q] KOG0055 Multidrug/pheromone exporter ABC superfamily 52 2e-06
At5g02270 [RK] KOG2355 Predicted ABC-type transport ATPase compo... 52 3e-06
YPL226w_2 [EJ] KOG0062 ATPase component of ABC transporters with... 50 6e-06
>YDR061w [R] KOG0927 Predicted transporter (ABC superfamily)
Length = 539
Score = 616 bits (1589), Expect = e-176
Identities = 306/537 (56%), Positives = 397/537 (72%), Gaps = 17/537 (3%)
Query: 1 MTLNKQVVKITDAFFKSSLRKGSPYVFPNKIR-FEINEGEKWCIWGPSKEKFIDILSNKY 59
M+ NK VV+IT+A FKSSL SP V+P +IR FEI EKW IWGP K KF+D+L+NKY
Sbjct: 1 MSTNKFVVRITNALFKSSLASNSPPVYPKRIRHFEILPNEKWVIWGPGKGKFLDVLNNKY 60
Query: 60 ISDPFSAVTYA--KVVKGRLPRIEQVKFKGVMPTAHLSARYEFFKDEFDQTCEKFILDNS 117
I +P ++ + K LPRIEQV FKGVMPTAHLSARYE+FKD++DQTC++FI D +
Sbjct: 61 ICEPPLSLRFGFLKESSNILPRIEQVAFKGVMPTAHLSARYEYFKDDYDQTCKQFIFDKA 120
Query: 118 MGSRAVNYEVETTNRYVDPXXXXXXXXXXXXXXXXXRWAMGLSNGQMRRTRLARSLLKEP 177
GS AV+Y+VET NR ++ RW MGLSNGQMRR RLARS+LKEP
Sbjct: 121 SGSNAVSYKVETNNRQINMELYNALVENLNLSSLQDRWVMGLSNGQMRRARLARSILKEP 180
Query: 178 DLTIIDDPFLGLDPSACSIISKFLSKYDK-----GTSVIIGLRYQDQIPDWCTHVVCVD- 231
DL +IDDPFLGLDP+A + IS+FL+KYD G ++IGLRYQD IP WCTH+ CVD
Sbjct: 181 DLLLIDDPFLGLDPAAIATISQFLAKYDSIEVSGGCPIVIGLRYQDTIPAWCTHICCVDE 240
Query: 232 KDGIEFQGPMEQYRDQVESMRLQLLEVL-QLNKP---KSKYTIEDLISPHKYYKSPHHDV 287
K+GI F+GP+E+ + +++ R + L+ L QL K K +I DLI H Y H++
Sbjct: 241 KNGILFEGPIEKLQSKMDETRSRALKELEQLKKASNSKEDISINDLICIHPMYGKKEHEI 300
Query: 288 MKIPSVVTLEGLSVTYSGEPVLKDIYWDVKQGSKWHIQGNNGAGKSTLLSLITADHPQSW 347
+K+P ++ L+GLSV+Y GE VL++++W V+ GSKWHI+G+NG+GKSTLLSL+TA+HPQSW
Sbjct: 301 IKMPHLIELDGLSVSYKGEAVLENLHWKVQPGSKWHIRGDNGSGKSTLLSLLTAEHPQSW 360
Query: 348 NSKFVDHGVPRRTGSTNFFDINKRIGLSSPEMHALFLKNAGD-LSVLETVASGFHAVSSN 406
NS+ +D+GVPRRTG TN+FD+N +IG+SSPE+HA+FLKNAG L++ E+VA+G+H SSN
Sbjct: 361 NSRVIDNGVPRRTGKTNYFDLNSKIGMSSPELHAIFLKNAGGRLNIRESVATGYHEASSN 420
Query: 407 NFLKAHNTLTDEQKRIVDMYIDYFHLD---PKKTFASLSVSEQKIALFVRAAVKMPEIMI 463
N+L L + IV+MY+ YF LD F LSVS+QK+ LFVR+ +KMP+I+I
Sbjct: 421 NYLPIWKRLDKNSQEIVNMYLKYFGLDKDADSVLFEQLSVSDQKLVLFVRSLIKMPQILI 480
Query: 464 LDEAFSGTETDQLIRAHEFLEQWPGTVFVVSHVQEETPKCNHYLRLIEPGQYEIGDV 520
LDEAFSG E + ++R HEFLE+WPGTV VV+HV EETPKC HYLRLI PG+YEIGD+
Sbjct: 481 LDEAFSGMEVEPMMRCHEFLEEWPGTVLVVAHVAEETPKCAHYLRLISPGEYEIGDM 537
>SPAC323.04 [R] KOG0927 Predicted transporter (ABC superfamily)
Length = 487
Score = 193 bits (490), Expect = 6e-49
Identities = 142/506 (28%), Positives = 236/506 (46%), Gaps = 62/506 (12%)
Query: 31 IRFEINEGEKWCI---WGPSKEKFIDILSNKYISDPFSAVTYAKVVKGRLPR----IEQV 83
+ FE+ + W I G + F+ + + P ++ +Y +KG+ I+ +
Sbjct: 23 VSFELARKQNWAIIGNTGSGRTTFLRCIQGSFTPSPSTSFSYP-FLKGKSDSPWQAIQLL 81
Query: 84 KFK--GVMPTAHLSARYEFFKD-EFDQTCEKFILDNSMGSRAVNYEVETTNRYVDPXXXX 140
FK G A+ S RY F+D E D T EK++L G+ + +++V
Sbjct: 82 DFKSSGQQRAAYYSERYHSFRDKEHDTTLEKWLLGAYRGNE------KFASQHVQEAASM 135
Query: 141 XXXXXXXXXXXXXRWAMGLSNGQMRRTRLARSLLKEPDLTIIDDPFLGLDPSACSIISKF 200
+ LSNGQ RR LA L++ P L ++D+P+ GLD ++ S++S
Sbjct: 136 TQLSHLLPSSL-----INLSNGQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSRSVLSSL 190
Query: 201 LSKYDKGTS--VIIGLRYQDQIPDWCTHVVCVDKDGIEFQGPMEQYRDQVESMRLQLLEV 258
L + S +++ LR QD+IPD+ THV+ + I +QGP EQY
Sbjct: 191 LGEMSNHCSPKIVLSLRPQDKIPDFITHVLELKNKKITYQGPKEQYI------------- 237
Query: 259 LQLNKPKSKYTIEDLISPHKYYKSPHHDVMKIPSVVTLEGLSVTYSGEPVLKDIYWDVKQ 318
P + ++ + P P + ++++E L+ Y G VL DI W +++
Sbjct: 238 -----PMTSHSTNIPVKPQMKKSKP---ITIGKPLISMEHLNCVYWGRKVLSDINWTIRE 289
Query: 319 GSKWHIQGNNGAGKSTLLSLITADHPQSW--NSKFVDHGVPRRTGSTNFFDINKRIGLSS 376
G +W + G+NG+GK+TLL+ + DHP+ + N KF + TG + FDI + IG S
Sbjct: 290 GERWALTGSNGSGKTTLLAYVVGDHPKLFASNIKFFGKSIGPGTG-ISIFDIQENIGHCS 348
Query: 377 PEMHALFLKNAGDLSVLETVASGFHAVSSNNFLKAHNTLTDEQKRIVDMYIDYFHLD--P 434
PE+H F K L + S + LT+ + + ++ F L
Sbjct: 349 PEIHNHFPKQHTCFEALLSAWSTTFTIPK---------LTETRLAAISSILEEFELKDIK 399
Query: 435 KKTFASLSVSEQKIALFVRAAVKMPEIMILDEAFSGTETDQLIRAHEFLEQW---PGTVF 491
K +S+SV Q+ LF RA VK P +++LDE F G +T + AH +L + +
Sbjct: 400 DKPLSSISVGMQRFILFCRAIVKQPRLVVLDEPFQGVDTKYVHMAHNYLNEKLSPSQAMV 459
Query: 492 VVSHVQEETPKCNHYLRLIEPGQYEI 517
++SH ++E P C + I+ G+ I
Sbjct: 460 IISHYEDELPACVNRRAHIDNGKLVI 485
>YER036c [R] KOG0927 Predicted transporter (ABC superfamily)
Length = 610
Score = 66.6 bits (161), Expect = 9e-11
Identities = 86/380 (22%), Positives = 159/380 (41%), Gaps = 79/380 (20%)
Query: 159 LSNGQMRRTRLARSLLKEPDLTIIDDPFLGLDPSACSIISKFLSKYDKGTSVIIGLRYQD 218
+S G R LA++L +P L ++DDP LD AC + ++L ++D+ ++++ QD
Sbjct: 227 MSGGWKMRVALAKALFVKPTLLLLDDPTAHLDLEACVWLEEYLKRFDR--TLVLVSHSQD 284
Query: 219 QIPDWCTHVVCVDKDGIEFQG----------------PMEQYRDQVESMRLQLLEVLQ-- 260
+ CT+++ + + G M+QY Q E ++ +
Sbjct: 285 FLNGVCTNMIDMRAQKLTAYGGNYDSYHKTRSELETNQMKQYNKQQEEIQHIKKFIASAG 344
Query: 261 -----LNKPKSKYTIEDL---------ISPHKYYKSPHHDVMKI-PSVVTLEGLSVTYSG 305
+ + KS+ I D + P K + V ++ P V+ + +S Y
Sbjct: 345 TYANLVKQAKSRQKILDKMEADGLVQPVVPDKVFSFRFPQVERLPPPVLAFDDISFHYES 404
Query: 306 EP---VLKDIYWDVKQGSKWHIQGNNGAGKSTLLSLITAD-HPQSWNSKFVDHGVPRRTG 361
P + + + + V S+ + G NG GKSTLL ++T + PQS V R T
Sbjct: 405 NPSENLYEHLNFGVDMDSRIALVGPNGVGKSTLLKIMTGELTPQSGR-------VSRHT- 456
Query: 362 STNFFDINKRIGLSSPEMHALFLKNAGDL--SVLETVASGFHAVSSN-NFLK---AHNTL 415
+ ++G+ S ++ DL S LE V + +S + F + L
Sbjct: 457 -------HVKLGVYSQHS-----QDQLDLTKSALEFVRDKYSNISQDFQFWRGQLGRYGL 504
Query: 416 TDEQKRIVDMYIDYFHLDPKKTFASLSVSEQKIALFVRAAVKMPEIMILDEAFSGTETDQ 475
T E + + A+LS ++ +F A++ P +++LDE +G +
Sbjct: 505 TGEGQTV--------------QMATLSEGQRSRVVFALLALEQPNVLLLDEPTNGLDIPT 550
Query: 476 LIRAHEFLEQWPGTVFVVSH 495
+ + + ++ G V VVSH
Sbjct: 551 IDSLADAINEFNGGVVVVSH 570
>SPBC16H5.08c [R] KOG0927 Predicted transporter (ABC superfamily)
Length = 618
Score = 65.1 bits (157), Expect = 2e-10
Identities = 83/374 (22%), Positives = 152/374 (40%), Gaps = 64/374 (17%)
Query: 159 LSNGQMRRTRLARSLLKEPDLTIIDDPFLGLDPSACSIISKFLSKYDKGTSVIIGLRYQD 218
+S G R L+R+L +P L ++D+P LD A + +L+KYDK +++ QD
Sbjct: 221 MSGGWRMRVALSRALFIKPSLLLLDEPTNHLDLEAVVWLENYLAKYDK--ILVVTSHSQD 278
Query: 219 QIPDWCTHVVCV--DKDGIEFQGPMEQY--------RDQVESMRLQLLEVLQLNK----- 263
+ + CT+++ + K + + G + Y +Q+++ Q E+ + K
Sbjct: 279 FLNNVCTNIIDLTSKKQLVYYGGNFDIYMRTKEENETNQMKAYLKQQEEIAHIKKFIASA 338
Query: 264 ---------PKSKYTIEDLI---------SPHKYYKSPHHDVMKI-PSVVTLEGLSVTYS 304
KSK I D + P + + +V K+ P ++ ++ +Y
Sbjct: 339 GTYANLVRQAKSKQKIIDKMEAAGLVEKPEPPRQFSFEFDEVRKLPPPIIAFNDVAFSYD 398
Query: 305 G---EPVLKDIYWDVKQGSKWHIQGNNGAGKSTLLSLITADHPQSWNSKFVDHGVPRRTG 361
G + +D+ + + S+ I G NG GKSTLL+LIT ++ V R +G
Sbjct: 399 GNLDHALYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGLLIP------IEGNVSRYSG 452
Query: 362 STNFFDINKRIGLSSPEMHALFLKNAGDLSVLETVASGFHAVSSNNFLKAHNTLTDEQKR 421
+ ++ H+ + D S LE + + L +Q R
Sbjct: 453 ----------LKMAKYSQHSAD-QLPYDKSPLEYIMDTYKPKFPEREL--------QQWR 493
Query: 422 IVDMYIDYFHLDPKKTFASLSVSEQKIALFVRAAVKMPEIMILDEAFSGTETDQLIRAHE 481
V L +LS + +F A++ P I++LDE + + + +
Sbjct: 494 SVLGKFGLSGLHQTSEIRTLSDGLKSRVVFAALALEQPHILLLDEPTNHLDITSIDALAK 553
Query: 482 FLEQWPGTVFVVSH 495
+ W G V +VSH
Sbjct: 554 AINVWTGGVVLVSH 567
>At5g09930 [R] KOG0927 Predicted transporter (ABC superfamily)
Length = 674
Score = 59.7 bits (143), Expect = 1e-08
Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 27/252 (10%)
Query: 266 SKYTIEDLISPHKYY--KSPHHDVMKIPSVVTLEGLSVTYSGEPVLKDIYWDVKQGSKWH 323
S +E L+S + K ++ I S V LE +S +Y G VLKD+ W+VK+G K
Sbjct: 54 SNSELESLLSTDRKLISKQSNNGASSISSGVRLENISKSYEGITVLKDVTWEVKKGEKVG 113
Query: 324 IQGNNGAGKSTLLSLITA-DHPQSWNSKFVDHGVPRRTGSTNF-FDINKRIGLSSPEMHA 381
+ G NGAGK+T L +IT + P S N + + S F + K + E
Sbjct: 114 LIGVNGAGKTTQLRIITGQEEPDSGNVIWAKPNLKVAFLSQEFEVSMGKTV---KEEFMC 170
Query: 382 LFLKNAGDLSVLETVASGFHAVSSNNFLKAHNTLTDE----QKRIVDMYIDYFHL----- 432
F + LE + + L+ L DE Q+R ++ +D H
Sbjct: 171 TFKEEMEIARKLENLQKAIEEAVDD--LELMGKLLDEFDLLQRRAQEVDLDSIHAKISKL 228
Query: 433 ---------DPKKTFASLSVSEQKIALFVRAAVKMPEIMILDEAFSGTETDQLIRAHEFL 483
D + AS S Q + ++ P++++LDE + + D + +L
Sbjct: 229 MSELGFVSEDADRLVASFSSGWQMRMSLGKILLQNPDLLLLDEPTNHLDLDTIEWLEGYL 288
Query: 484 EQWPGTVFVVSH 495
+ + ++SH
Sbjct: 289 IKQDVPMVIISH 300
>At5g64840 [R] KOG0927 Predicted transporter (ABC superfamily)
Length = 692
Score = 55.5 bits (132), Expect = 2e-07
Identities = 31/69 (44%), Positives = 41/69 (58%), Gaps = 1/69 (1%)
Query: 281 KSPHHDVMKIPSVVTLEGLSVTYSGEPVLKDIYWDVKQGSKWHIQGNNGAGKSTLLSLIT 340
KS + I S V LE + +Y G VLKD+ W+VK+G K + G NGAGK+T L +IT
Sbjct: 85 KSSKNGASGISSGVKLENIRKSYKGVTVLKDVTWEVKRGEKVGLVGVNGAGKTTQLRIIT 144
Query: 341 A-DHPQSWN 348
+ P S N
Sbjct: 145 GQEEPDSGN 153
>CE28355 [U] KOG0058 Peptide exporter ABC superfamily
Length = 787
Score = 52.4 bits (124), Expect = 2e-06
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 302 TYSGEPVLKDIYWDVKQGSKWHIQGNNGAGKSTLLSLITADHPQSWNSKFVDHGVPRRTG 361
T S +P+LKD+ + V+ G + G +G+GKS+ +SL+ + + VD GVP
Sbjct: 509 TRSDQPILKDLSFTVEPGETVALVGPSGSGKSSCISLLENFYVPNAGQVLVD-GVPLEEF 567
Query: 362 STNFFDINKRIGLSSPEMHALFLKNAGDLSVLETVASGFHAVSSNNFLKAHNTLTDEQKR 421
++ I+K+I L E LF + SV+E V G + + +
Sbjct: 568 EHHY--IHKKIALVGQE-PVLFAR-----SVMENVRYGVEVADTEIIRSCE--MANAHGF 617
Query: 422 IVDMYIDYFHLDPKKTFASLSVSEQKIALFVRAAVKMPEIMILDEAFSG--TETDQLIRA 479
I+ + Y +K +Q+IA+ RA V+ P I++LDEA S TE++ L++
Sbjct: 618 IMQTTLKYETNVGEKGTQMSGGQKQRIAI-ARALVREPAILLLDEATSALDTESEHLVQE 676
Query: 480 HEFLEQWPGTVFVVSHVQEETPKCNHYLRLIEPGQYE 516
+ +V +++H K + + +I G+ E
Sbjct: 677 AIYKNLDGKSVILIAHRLSTVEKADKIV-VINKGRVE 712
>CE07240 [U] KOG0058 Peptide exporter ABC superfamily
Length = 761
Score = 52.4 bits (124), Expect = 2e-06
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 19/241 (7%)
Query: 286 DVMKIPSV---VTLEGLSVTYSGEP---VLKDIYWDVKQGSKWHIQGNNGAGKSTLLSLI 339
D M+ P V +T + TY P VLKD+ +K G + G +G GKS+++SLI
Sbjct: 503 DGMQRPFVNGNITFSHVGFTYPSRPNNPVLKDLTLSIKSGETVALVGPSGGGKSSIVSLI 562
Query: 340 TADHPQSWNSKFVDHGVPRRTGSTNFFDINKRIGLSSPEMHALFLKNAGDLSVLETVASG 399
+ S +D GVP + N ++++ L + E L N SV + G
Sbjct: 563 EHFYEPDEGSVTLD-GVPIK--DINHVYYHQKVALVAQEP---VLYNG---SVRHNILYG 613
Query: 400 FHAVSSNNFLKAHNTLTDEQKRIVDMYIDYFHLDPKKTFASLSVSEQKIALFVRAAVKMP 459
+ ++ L A + + + ++++ Y +K +Q+IA+ RA V+ P
Sbjct: 614 CDFATEDDMLNA-SKMANVHDFVMELEKGYDTNCGEKGVQMSGGQKQRIAI-ARALVRNP 671
Query: 460 EIMILDEAFSGTETDQLIRAHEFLEQ--WPGTVFVVSHVQEETPKCNHYLRLIEPGQYEI 517
++ILDEA S +T+ + L + TV +V+H K N +++ ++
Sbjct: 672 AVLILDEATSALDTESEALVQQALSRCAQERTVIIVAHRLSTIEKANKIAVIVKGCLVQM 731
Query: 518 G 518
G
Sbjct: 732 G 732
>At5g60790 [R] KOG0927 Predicted transporter (ABC superfamily)
Length = 595
Score = 52.4 bits (124), Expect = 2e-06
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 294 VTLEGLSVTYSGEPVLKDIYWDVKQGSKWHIQGNNGAGKSTLLSLITADH---PQSWNSK 350
+ +E LSVT+ G ++ D ++ G ++ + G NG GKSTLL+ I P +
Sbjct: 69 IRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGRREIPIPDQMDIY 128
Query: 351 FVDHGVPRRTGSTNFFDINKRIGLSSPEMHALFLKNAGDLSVLETVASGFHAVSSNNFLK 410
+ H + D++ + S + L L+ ++ V + G S L
Sbjct: 129 HLSHEIEAT-------DMSSLEAVVSCDEERLRLEKEVEILVQQDDGGGERLQSIYERLD 181
Query: 411 AHNTLTDEQKRIVDMYIDYF--HLDPKKTFASLSVSEQKIALFVRAAVKMPEIMILDEAF 468
A + T E++ ++ F + KKT +IAL RA MP I++LDE
Sbjct: 182 AMDAETAEKRAAEILFGLGFDKEMQAKKTKDFSGGWRMRIAL-ARALFIMPTILLLDEPT 240
Query: 469 SGTETDQLIRAHEFLEQWPGTVFVVSHVQE 498
+ + + + E L+ + + VVSH Q+
Sbjct: 241 NHLDLEACVWLEESLKNFDRILVVVSHSQD 270
>CE29212 [Q] KOG0055 Multidrug/pheromone exporter ABC superfamily
Length = 1265
Score = 52.0 bits (123), Expect = 2e-06
Identities = 53/192 (27%), Positives = 89/192 (45%), Gaps = 17/192 (8%)
Query: 308 VLKDIYWDVKQGSKWHIQGNNGAGKSTLLSLITADHPQSWNSKFVDHGVPRRTGSTNFFD 367
VLK I ++K G K + G++G GKST+++L+ + + +D GV R N
Sbjct: 409 VLKGISLELKAGDKIALVGSSGCGKSTIVNLLQRFYDPTKGRVLID-GVDLR--EVNVHS 465
Query: 368 INKRIGLSSPEMHALFLKNAGDLSVLETVASGFHAVSSNNFLKAHN--TLTDEQKRIVDM 425
+ ++IG+ S E LF D ++ E + G + + ++A D KR+ D
Sbjct: 466 LREQIGIVSQE-PVLF-----DGTIYENIKMGNEHATHDQVVEACKMANANDFIKRLPDG 519
Query: 426 YIDYFHLDPKKTFASLSVSEQKIALFVRAAVKMPEIMILDEAFSGTETDQLIRAHEFLEQ 485
Y + LS +++ RA VK P+I++LDEA S +T+ L+Q
Sbjct: 520 Y----GTRVGEKGVQLSGGQKQRIAIARALVKNPKILLLDEATSALDTEAEREVQGALDQ 575
Query: 486 WPG--TVFVVSH 495
T +V+H
Sbjct: 576 AQAGRTTIIVAH 587
>At5g02270 [RK] KOG2355 Predicted ABC-type transport ATPase component/CCR4
associated factor
Length = 328
Score = 51.6 bits (122), Expect = 3e-06
Identities = 29/101 (28%), Positives = 55/101 (53%), Gaps = 2/101 (1%)
Query: 159 LSNGQMRRTRLARSLLKEPDLTIIDDPFLGLDPSACSIISKFLSKY--DKGTSVIIGLRY 216
+S+GQ RR ++ LLK + ++D+ + LD A + + KFL K ++G ++I
Sbjct: 157 VSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHI 216
Query: 217 QDQIPDWCTHVVCVDKDGIEFQGPMEQYRDQVESMRLQLLE 257
D + DW TH+V V ++ PME+ ++ + ++ +E
Sbjct: 217 FDGLEDWPTHIVYVANGKLQLALPMEKVKETSKKSLMRTVE 257
>YPL226w_2 [EJ] KOG0062 ATPase component of ABC transporters with duplicated
ATPase domains/Translation elongation factor EF-3b
Length = 631
Score = 50.4 bits (119), Expect = 6e-06
Identities = 45/191 (23%), Positives = 89/191 (46%), Gaps = 23/191 (12%)
Query: 159 LSNGQMRRTRLARSLLKEPDLTIIDDPFLGLDPSACSIISKFLSKYDKGTSVIIGLRYQD 218
LS G + LAR++L++ D+ ++D+P LD S + ++L ++ TS+I+
Sbjct: 123 LSGGWKMKLELARAMLQKADILLLDEPTNHLDVSNVKWLEEYLLEHTDITSLIVS-HDSG 181
Query: 219 QIPDWCTHVVCVDKDGIEFQGPMEQYRDQVESMRLQLLEVLQLNKPKSKYTIEDLISPHK 278
+ CT ++ + + + Y+ + + V Q + KS YT+ D + +
Sbjct: 182 FLDTVCTDIIHYENKKLAY------YKGNLAAF------VEQKPEAKSYYTLTDSNAQMR 229
Query: 279 YYKSPHHDVM-----KIPSVVTLEGLSVTYSG--EPVLKDIYWDVKQGSKWHIQGNNGAG 331
+ P ++ +V + ++ +Y G +P L + + S+ G NGAG
Sbjct: 230 F---PPPGILTGVKSNTRAVAKMTDVTFSYPGAQKPSLSHVSCSLSLSSRVACLGPNGAG 286
Query: 332 KSTLLSLITAD 342
KSTL+ L+T +
Sbjct: 287 KSTLIKLLTGE 297
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,155,290
Number of Sequences: 60738
Number of extensions: 1343193
Number of successful extensions: 4296
Number of sequences better than 1.0e-05: 12
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4239
Number of HSP's gapped (non-prelim): 40
length of query: 521
length of database: 30,389,216
effective HSP length: 111
effective length of query: 410
effective length of database: 23,647,298
effective search space: 9695392180
effective search space used: 9695392180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)