ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV0679 check: MH Z KOG0303 Cytoskeleton Actin-binding protein Coronin, contains WD40 repeats
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV0679 214826 212706 -707
(707 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR429w [Z] KOG0303 Actin-binding protein Coronin contains WD40 ... 739 0.0
SPAC23C4.02 [Z] KOG0303 Actin-binding protein Coronin contains W... 491 e-138
Hs14149734 [Z] KOG0303 Actin-binding protein Coronin contains WD... 318 1e-86
Hs7656991 [Z] KOG0303 Actin-binding protein Coronin contains WD4... 316 7e-86
Hs5902134 [Z] KOG0303 Actin-binding protein Coronin contains WD4... 305 1e-82
7302313 [Z] KOG0303 Actin-binding protein Coronin contains WD40 ... 297 4e-80
Hs16554585 [Z] KOG0303 Actin-binding protein Coronin contains WD... 293 6e-79
Hs16554583 [Z] KOG0303 Actin-binding protein Coronin contains WD... 293 8e-79
CE00590 [Z] KOG0303 Actin-binding protein Coronin contains WD40 ... 266 6e-71
Hs22054763 [Z] KOG0303 Actin-binding protein Coronin contains WD... 237 4e-62
7290756 [Z] KOG1445 Tumor-specific antigen (contains WD repeats) 202 1e-51
Hs13375690 [Z] KOG1445 Tumor-specific antigen (contains WD repeats) 201 2e-51
CE19273 [Z] KOG1445 Tumor-specific antigen (contains WD repeats) 152 2e-36
Hs14249582 [Z] KOG0303 Actin-binding protein Coronin contains WD... 125 2e-28
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 82 2e-15
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 82 3e-15
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 80 1e-14
Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 s... 79 2e-14
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 77 9e-14
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 77 9e-14
7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 76 2e-13
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 75 3e-13
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 74 6e-13
Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein 74 8e-13
Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 74 8e-13
At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 74 1e-12
7294830 [K] KOG0263 Transcription initiation factor TFIID subuni... 72 2e-12
Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 72 4e-12
At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 71 5e-12
At1g10580 [S] KOG0282 mRNA splicing factor 71 5e-12
CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 71 6e-12
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 70 8e-12
Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 70 1e-11
Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 70 1e-11
At5g25150 [K] KOG0263 Transcription initiation factor TFIID subu... 70 1e-11
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 69 2e-11
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 69 2e-11
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 69 2e-11
CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 69 3e-11
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 68 5e-11
YBR198c [K] KOG0263 Transcription initiation factor TFIID subuni... 67 7e-11
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 67 7e-11
ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID sub... 67 9e-11
YCR084c [R] KOG0266 WD40 repeat-containing protein 67 1e-10
At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein 67 1e-10
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 66 2e-10
YFL009w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 65 3e-10
7302600 [R] KOG4155 FOG: WD40 repeat 65 3e-10
Hs4885105 [BL] KOG1009 Chromatin assembly complex 1 subunit B/CA... 65 4e-10
7302720 [R] KOG0266 WD40 repeat-containing protein 65 4e-10
7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 65 4e-10
SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subun... 65 5e-10
Hs7706657 [S] KOG0282 mRNA splicing factor 65 5e-10
7303687 [K] KOG0263 Transcription initiation factor TFIID subuni... 65 5e-10
YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 64 6e-10
Hs21071065 [K] KOG0263 Transcription initiation factor TFIID sub... 64 6e-10
7299285 [R] KOG4155 FOG: WD40 repeat 64 6e-10
ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 64 8e-10
SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID su... 63 2e-09
SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 63 2e-09
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 63 2e-09
At3g49660 [R] KOG0266 WD40 repeat-containing protein 63 2e-09
SPBC6B1.10 [S] KOG0282 mRNA splicing factor 62 2e-09
SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein 62 2e-09
Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S... 62 2e-09
ECU01g1290 [U] KOG0292 Vesicle coat complex COPI alpha subunit 62 2e-09
CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 62 2e-09
At4g32990 [R] KOG0645 WD40 repeat protein 62 2e-09
7290331 [R] KOG0266 WD40 repeat-containing protein 62 2e-09
7300806 [S] KOG0282 mRNA splicing factor 62 3e-09
SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 62 4e-09
7302082 [A] KOG0640 mRNA cleavage stimulating factor complex; su... 62 4e-09
At4g02730 [R] KOG0266 WD40 repeat-containing protein 61 5e-09
At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit 61 5e-09
At1g15440 [A] KOG0291 WD40-repeat-containing subunit of the 18S ... 61 5e-09
7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 61 5e-09
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 61 7e-09
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 61 7e-09
At3g15980 [U] KOG0276 Vesicle coat complex COPI beta' subunit 61 7e-09
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 61 7e-09
Hs13376840 [R] KOG4155 FOG: WD40 repeat 60 9e-09
At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S ... 60 1e-08
At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 60 1e-08
7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 60 1e-08
7302218 [R] KOG0302 Ribosome Assembly protein 59 2e-08
YNL006w [R] KOG0315 G-protein beta subunit-like protein (contain... 59 3e-08
Hs4757988 [R] KOG0645 WD40 repeat protein 59 3e-08
CE29339 [S] KOG0295 WD40 repeat-containing protein 59 3e-08
SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 59 3e-08
SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein 59 3e-08
CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 59 3e-08
7303739 [BL] KOG1009 Chromatin assembly complex 1 subunit B/CAC2... 59 3e-08
SPAC630.14c [R] KOG0266 WD40 repeat-containing protein 58 4e-08
At2g19540 [R] KOG0302 Ribosome Assembly protein 58 4e-08
At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit 58 4e-08
7302979 [S] KOG0295 WD40 repeat-containing protein 58 4e-08
CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 58 6e-08
CE06574 [R] KOG0266 WD40 repeat-containing protein 58 6e-08
At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 58 6e-08
SPBC31F10.13c [DK] KOG0973 Histone transcription regulator HIRA ... 57 7e-08
Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 57 7e-08
Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 57 7e-08
Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 57 7e-08
Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 57 7e-08
Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 57 7e-08
At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 57 7e-08
At2g22040 [R] KOG0315 G-protein beta subunit-like protein (conta... 57 7e-08
At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 57 7e-08
7293188 [D] KOG0267 Microtubule severing protein katanin p80 sub... 57 7e-08
At3g18130 [T] KOG0279 G protein beta subunit-like protein 57 1e-07
At2g05720 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 57 1e-07
SPBC354.03 [R] KOG0266 WD40 repeat-containing protein 57 1e-07
Hs4557515 [S] KOG4328 WD40 protein 57 1e-07
CE06090 [T] KOG0279 G protein beta subunit-like protein 57 1e-07
7299504 [R] KOG2444 WD40 repeat protein 57 1e-07
7296695 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 57 1e-07
SPBC577.09 [KL] KOG4283 Transcription-coupled repair protein CSA... 56 2e-07
Hs22052079 [R] KOG0266 WD40 repeat-containing protein 56 2e-07
Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 56 2e-07
CE28405 [S] KOG0282 mRNA splicing factor 56 2e-07
At3g18060 [Z] KOG0318 WD40 repeat stress protein/actin interacti... 56 2e-07
7297759 [Z] KOG0313 Microtubule binding protein YTM1 (contains W... 56 2e-07
ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit ... 56 2e-07
7302603 [R] KOG0289 mRNA splicing factor 56 2e-07
7301821 [S] KOG0269 WD40 repeat-containing protein 56 2e-07
YDL145c [U] KOG0292 Vesicle coat complex COPI alpha subunit 55 3e-07
Hs7657381 [R] KOG0289 mRNA splicing factor 55 3e-07
Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/... 55 3e-07
Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 55 3e-07
At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 55 3e-07
7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 55 3e-07
7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit 55 3e-07
CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 55 4e-07
At5g42010 [S] KOG0283 WD40 repeat-containing protein 55 4e-07
7297305 [T] KOG0279 G protein beta subunit-like protein 55 4e-07
Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 55 5e-07
Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 55 5e-07
At4g15900 [A] KOG0285 Pleiotropic regulator 1 55 5e-07
SPBC244.03 [U] KOG0276 Vesicle coat complex COPI beta' subunit 54 6e-07
SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 54 6e-07
Hs8923881 [R] KOG0266 WD40 repeat-containing protein 54 6e-07
Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 54 6e-07
CE11748 [R] KOG0266 WD40 repeat-containing protein 54 6e-07
7303130 [R] KOG0645 WD40 repeat protein 54 6e-07
YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 54 8e-07
CE29136 [U] KOG0292 Vesicle coat complex COPI alpha subunit 54 8e-07
SPAC3H5.08c [S] KOG0283 WD40 repeat-containing protein 54 1e-06
Hs9257257 [Z] KOG0318 WD40 repeat stress protein/actin interacti... 54 1e-06
Hs4827056 [Z] KOG0318 WD40 repeat stress protein/actin interacti... 54 1e-06
Hs4557491 [A] KOG0640 mRNA cleavage stimulating factor complex; ... 54 1e-06
Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit ... 54 1e-06
Hs11321585 [R] KOG0286 G-protein beta subunit 54 1e-06
CE00901 [R] KOG0266 WD40 repeat-containing protein 54 1e-06
At5g53500 [S] KOG0283 WD40 repeat-containing protein 54 1e-06
At5g50230 [R] KOG0288 WD40 repeat protein TipD 54 1e-06
YPL151c [A] KOG0285 Pleiotropic regulator 1 53 1e-06
SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 53 1e-06
Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 53 1e-06
Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit 53 2e-06
Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 53 2e-06
Hs22059675 [S] KOG0283 WD40 repeat-containing protein 53 2e-06
At2g37670 [S] KOG0283 WD40 repeat-containing protein 53 2e-06
HsM6005894_2 [R] KOG4155 FOG: WD40 repeat 53 2e-06
Hs21536371_2 [R] KOG4155 FOG: WD40 repeat 53 2e-06
YGL137w [U] KOG0276 Vesicle coat complex COPI beta' subunit 52 2e-06
SPAC31A2.14 [S] KOG0308 Conserved WD40 repeat-containing protein 52 2e-06
Hs5174447 [T] KOG0279 G protein beta subunit-like protein 52 2e-06
Hs22046076 [R] KOG0266 WD40 repeat-containing protein 52 2e-06
Hs20149592 [I] KOG0278 Serine/threonine kinase receptor-associat... 52 2e-06
At3g44530 [DK] KOG0973 Histone transcription regulator HIRA WD r... 52 2e-06
At1g24530 [R] KOG4155 FOG: WD40 repeat 52 2e-06
7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 52 2e-06
SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing... 52 3e-06
Hs20537071 [I] KOG0278 Serine/threonine kinase receptor-associat... 52 3e-06
Hs20143912 [R] KOG0266 WD40 repeat-containing protein 52 3e-06
At5g43920 [S] KOG0293 WD40 repeat-containing protein 52 3e-06
At3g18140 [R] KOG0315 G-protein beta subunit-like protein (conta... 52 3e-06
At2g26060 [R] KOG0645 WD40 repeat protein 52 3e-06
At1g18080 [T] KOG0279 G protein beta subunit-like protein 52 3e-06
Hs7108333_2 [R] KOG4155 FOG: WD40 repeat 52 3e-06
Hs4502123_2 [R] KOG4155 FOG: WD40 repeat 52 3e-06
At5g56130 [S] KOG1407 WD40 repeat protein 52 4e-06
At5g49200 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 52 4e-06
At2g01330 [Z] KOG0318 WD40 repeat stress protein/actin interacti... 52 4e-06
7300980 [R] KOG4155 FOG: WD40 repeat 52 4e-06
CE20251_2 [U] KOG0276 Vesicle coat complex COPI beta' subunit 52 4e-06
SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18... 51 5e-06
CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 51 5e-06
CE13295 [S] KOG0772 Uncharacterized conserved protein contains W... 51 5e-06
At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein 51 5e-06
At1g62020 [U] KOG0292 Vesicle coat complex COPI alpha subunit 51 5e-06
At1g48630 [T] KOG0279 G protein beta subunit-like protein 51 5e-06
7291600 [I] KOG0278 Serine/threonine kinase receptor-associated ... 51 5e-06
YDR267c [R] KOG0645 WD40 repeat protein 51 7e-06
SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 51 7e-06
Hs18677720 [R] KOG0266 WD40 repeat-containing protein 51 7e-06
CE12908 [S] KOG0321 WD40 repeat-containing protein L2DTL 51 7e-06
At5g02430 [S] KOG0283 WD40 repeat-containing protein 51 7e-06
7292122 [U] KOG0292 Vesicle coat complex COPI alpha subunit 51 7e-06
YMR116c [T] KOG0279 G protein beta subunit-like protein 50 9e-06
Hs14523052 [K] KOG1034 Transcriptional repressor EED/ESC/FIE req... 50 9e-06
CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 50 9e-06
CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 50 9e-06
CE02043 [R] KOG0289 mRNA splicing factor 50 9e-06
At5g54200 [S] KOG0283 WD40 repeat-containing protein 50 9e-06
At3g16650 [A] KOG0285 Pleiotropic regulator 1 50 9e-06
At1g48870 [S] KOG0283 WD40 repeat-containing protein 50 9e-06
Hs13994164_1 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 50 9e-06
>YLR429w [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 651
Score = 739 bits (1908), Expect = 0.0
Identities = 383/704 (54%), Positives = 480/704 (67%), Gaps = 69/704 (9%)
Query: 13 ISGRFVRASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFA 72
+SG+FVRASKYRHV+GQ AKKELQYE L++T+NAWDSNL+K NGK+I+VNWN+SGGGAFA
Sbjct: 1 MSGKFVRASKYRHVFGQAAKKELQYEKLKVTNNAWDSNLLKTNGKFIAVNWNASGGGAFA 60
Query: 73 VIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEY 132
VIP++EVGK PDQVPLFRGHTAQVLDTDF PFNDH +ASGSDD KIGIW+IPE+Y H++
Sbjct: 61 VIPIEEVGKAPDQVPLFRGHTAQVLDTDFDPFNDHRIASGSDDSKIGIWDIPENYKFHDH 120
Query: 133 VDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK 192
VDE+G P D+KPV+ L+GH+RKVGH+L+HP+AEN+LASSS DYTVK+W++ + TLK
Sbjct: 121 VDEDGEPIDIKPVKFLTGHARKVGHVLYHPVAENVLASSSGDYTVKLWNVETGKDMITLK 180
Query: 193 HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKV 252
HPDMVTSMSFSYDG +L TV+RDKKLRVW++R EKIVSEGPAH+GAKNQRVVWLG++D++
Sbjct: 181 HPDMVTSMSFSYDGNYLATVARDKKLRVWNIREEKIVSEGPAHTGAKNQRVVWLGNSDRL 240
Query: 253 ATTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNI 312
ATTGFS+LSDRQIG+WDAFN+EKG+LGGFY VDQSSGILMPFYD+ N+ILY+ GKGDGNI
Sbjct: 241 ATTGFSKLSDRQIGIWDAFNIEKGDLGGFYTVDQSSGILMPFYDEGNKILYLVGKGDGNI 300
Query: 313 RYFEFQNDELYELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEPISFYVP 372
RY+EFQNDEL+ELSE+QSTE QRGFAVAPKR VNVKENEVLK +K V + +EP+SF+VP
Sbjct: 301 RYYEFQNDELFELSEFQSTEAQRGFAVAPKRMVNVKENEVLKGFKTVVDQRIEPVSFFVP 360
Query: 373 RKSEVFQDDIYPDAPSSKPALSAAEWVEGKSVDGPILFKLQTLYDGSEPEFTDSKKPVKE 432
R+SE FQ+DIYPDAPS+KPAL+A EW GKSV+GPIL ++++YDGS P F ++K+P +
Sbjct: 361 RRSEEFQEDIYPDAPSNKPALTAEEWFSGKSVEGPILVSMRSIYDGSAPSFHEAKRPQQP 420
Query: 433 LTXXXXXXXXX---XXXXXXXXXXTEVKHEVIIQLTXXXXXXXXXXXXXXXXXXXXXARK 489
T EVK E A K
Sbjct: 421 TTQETALEEKKEQPKVEKPISESEKEVKQE---------------------------APK 453
Query: 490 EMPPAKD-TGKNQVDELLSKDASVNKLLQKASDLDADNEAENPXXXXXXXXXXXXKIVKA 548
P K + + ++ +L +D S+NKLL+K+SD+D N AE+P
Sbjct: 454 SPSPLKSASSSSTINHVLKEDNSINKLLKKSSDIDQVNNAEDP----------------- 496
Query: 549 SQQPEVVVKVEANTDSEPDKAAEEVPQQKEENSSTEITSKASASSKVESTPEAKVEASSQ 608
+ S ++A +E K E T +K + KVE + E K E S
Sbjct: 497 -----------SRDTSGWEEADDEPAPIKIETPVTPTETKKDRTPKVEPSKELKPEPVSI 545
Query: 609 ASVETNIRVNPSQEDSEEKPSS----------NPNTXXXXXXXXXXXXXXXXXXSTNKSL 658
A+ + P +E S EK S + T ++ KSL
Sbjct: 546 ATDRKQEQSLPQEEKSSEKTKSPEQEKSATPPSSITAAKTAITASSKEEPSAARTSPKSL 605
Query: 659 NLRQSVETLSGLVLKLESYIDKLTEENTRKDEILAALEAKVDRL 702
L++SVE LS LVL+LE +DKLT+ N KDE L LE K+ L
Sbjct: 606 GLKKSVEKLSTLVLQLEDVVDKLTKANLDKDERLLKLEQKIGEL 649
>SPAC23C4.02 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 601
Score = 491 bits (1263), Expect = e-138
Identities = 236/405 (58%), Positives = 301/405 (74%), Gaps = 8/405 (1%)
Query: 13 ISGRFVRASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFA 72
+SGRFVRASKYRH++GQ KKEL Y+N+++++NAWDSNL+ N Y+SVNWN+ GGA A
Sbjct: 1 MSGRFVRASKYRHIFGQTCKKELCYDNIKLSNNAWDSNLLSVNPFYLSVNWNAGAGGALA 60
Query: 73 VIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEY 132
VIP+ E GK+PDQV LFRGHTA VLDTD++PF+D ++ASG DD KI IW++PEDY + E
Sbjct: 61 VIPLNERGKLPDQVNLFRGHTAAVLDTDWNPFHDQVLASGGDDSKIMIWKVPEDYTVMEP 120
Query: 133 VDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK 192
+ D+ P+ L GHSRKVG + +HP A N+LASSS D T+K+WD + +LK
Sbjct: 121 YE------DVHPIAELKGHSRKVGLVQYHPTAANVLASSSADNTIKLWDCEKGVAHVSLK 174
Query: 193 HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKV 252
M SMSF+ DG LVT SRDKK+RVWD R +K VS G H+GAKN RVVWLG D+
Sbjct: 175 MDVMCQSMSFNADGTRLVTTSRDKKVRVWDPRTDKPVSVGNGHAGAKNPRVVWLGSLDRF 234
Query: 253 ATTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNI 312
ATTGFS++SDRQI +WD NL + +GGF +D SGILMPF+DD +++Y+AGKGDGNI
Sbjct: 235 ATTGFSKMSDRQIALWDPTNLSEP-IGGFTTLDTGSGILMPFWDDGTKVIYLAGKGDGNI 293
Query: 313 RYFEFQNDELYELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEPISFYVP 372
RY+E++ND + LSE++S +PQRG A PKR VNV ENEV++AYK+V + +EPISF VP
Sbjct: 294 RYYEYENDVFHYLSEFKSVDPQRGIAFLPKRGVNVSENEVMRAYKSVNDSIIEPISFIVP 353
Query: 373 RKSEVFQDDIYPDAPSSKPALSAAEWVEGKSVDGPILFKLQTLYD 417
R+SE FQ DIYP APS KP+L+A EW GK P L + TLY+
Sbjct: 354 RRSESFQSDIYPPAPSGKPSLTAEEWASGKDAQ-PDLLDMSTLYE 397
>Hs14149734 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 489
Score = 318 bits (816), Expect = 1e-86
Identities = 169/406 (41%), Positives = 249/406 (60%), Gaps = 19/406 (4%)
Query: 16 RFVRASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFAVIP 75
+ VR SK+RHV+GQP K + YE++R++ WDS N K+++V +SGGGAF V+P
Sbjct: 5 KVVRQSKFRHVFGQPVKNDQCYEDIRVSRVTWDSTFCAVNPKFLAVIVEASGGGAFLVLP 64
Query: 76 VKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDE 135
+ + G+I P GHT VLD D+ P ND ++ASGS+D + +W+IPE+ GL + E
Sbjct: 65 LSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPEN-GLTSPLTE 123
Query: 136 EGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK--H 193
PV +L GH+++VG + +HP A N+L S+ D V IW++ E + L H
Sbjct: 124 --------PVVVLEGHTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLH 175
Query: 194 PDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSE-GPAHSGAKNQRVVWLGDTDKV 252
PD++ ++S++++G + +DK +R+ D R +V+E AH GA+ R ++L D KV
Sbjct: 176 PDLIYNVSWNHNGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLAD-GKV 234
Query: 253 ATTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNI 312
TTGFSR+S+RQ+ +WD NLE+ +D S+G L+PFYD ++YV GKGD +I
Sbjct: 235 FTTGFSRMSERQLALWDPENLEEPM--ALQELDSSNGALLPFYDPDTSVVYVCGKGDSSI 292
Query: 313 RYFEFQNDE--LYELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEPISFY 370
RYFE + ++ L+ + S EPQRG PKR + V + E+ + YK + E EPI
Sbjct: 293 RYFEITEEPPYIHFLNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYK-LHERKCEPIVMT 351
Query: 371 VPRKSEVFQDDIYPDAPSSKPALSAAEWVEGKSVDGPILFKLQTLY 416
VPRKS++FQDD+YPD + AL A EWV G+ D PIL L+ Y
Sbjct: 352 VPRKSDLFQDDLYPDTAGPEAALEAEEWVSGRDAD-PILISLREAY 396
>Hs7656991 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 474
Score = 316 bits (810), Expect = 7e-86
Identities = 168/406 (41%), Positives = 254/406 (62%), Gaps = 19/406 (4%)
Query: 16 RFVRASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFAVIP 75
R VR SK+RHV+GQ K + Y+++R++ WDS+ N +++++ +SGGGAF V+P
Sbjct: 3 RVVRQSKFRHVFGQAVKNDQCYDDIRVSRVTWDSSFCAVNPRFVAIIIEASGGGAFLVLP 62
Query: 76 VKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDE 135
+ + G+I P GHT VLD D+ P ND ++ASGS+D + +W+IPE+ GL + E
Sbjct: 63 LHKTGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPEN-GLTLSLTE 121
Query: 136 EGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL--KH 193
PV +L GHS++VG + +HP A N+L S+ D + IW++ E L H
Sbjct: 122 --------PVVILEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMH 173
Query: 194 PDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSE-GPAHSGAKNQRVVWLGDTDKV 252
DM+ ++S++ +G + T S+DKK+RV D R ++IV+E AH GA+ R ++L D V
Sbjct: 174 SDMIYNVSWNRNGSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLAD-GNV 232
Query: 253 ATTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNI 312
TTGFSR+S+RQ+ +W+ N+++ + +D S+G+L+PFYD I+Y+ GKGD +I
Sbjct: 233 FTTGFSRMSERQLALWNPKNMQEPI--ALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSI 290
Query: 313 RYFEFQNDELY--ELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEPISFY 370
RYFE ++ Y L+ + S EPQRG PKR ++V + E+ + +K + E EPI
Sbjct: 291 RYFEITDESPYVHYLNTFSSKEPQRGMGYMPKRGLDVNKCEIARFFK-LHERKCEPIIMT 349
Query: 371 VPRKSEVFQDDIYPDAPSSKPALSAAEWVEGKSVDGPILFKLQTLY 416
VPRKS++FQDD+YPD + AL A EW EGK+ D PIL L+ Y
Sbjct: 350 VPRKSDLFQDDLYPDTAGPEAALEAEEWFEGKNAD-PILISLKHGY 394
>Hs5902134 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 461
Score = 305 bits (782), Expect = 1e-82
Identities = 164/410 (40%), Positives = 250/410 (60%), Gaps = 20/410 (4%)
Query: 13 ISGRFVRASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFA 72
+S + VR+SK+RHV+GQPAK + YE++R++ WDS N K++++ +SGGGAF
Sbjct: 1 MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQTTWDSGFCAVNPKFVALICEASGGGAFL 60
Query: 73 VIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEY 132
V+P+ + G++ P GHTA VLD + P ND+++ASGS+D + +WEIP D GL
Sbjct: 61 VLPLGKTGRVDKNAPTVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIP-DGGLMLP 119
Query: 133 VDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL- 191
+ E PV L GH+++VG + +H A+N+L S+ D + +WD+ TL
Sbjct: 120 LRE--------PVVTLEGHTKRVGIVAWHTTAQNVLLSAGCDNVIMVWDVGTGAAMLTLG 171
Query: 192 --KHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSE-GPAHSGAKNQRVVWLGD 248
HPD + S+ +S DG + T RDK++R+ + R +V+E H G + R V++ +
Sbjct: 172 PEVHPDTIYSVDWSRDGGLICTSCRDKRVRIIEPRKGTVVAEKDRPHEGTRPVRAVFVSE 231
Query: 249 TDKVATTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKG 308
K+ TTGFSR+S+RQ+ +WD +LE+ +D SSG+L+PF+D I+Y+ GKG
Sbjct: 232 -GKILTTGFSRMSERQVALWDTKHLEEPL--SLQELDTSSGVLLPFFDPDTNIVYLCGKG 288
Query: 309 DGNIRYFEFQNDE--LYELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEP 366
D +IRYFE ++ L+ LS + S E QRG PKR + V + E+ + YK + E EP
Sbjct: 289 DSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYK-LHERRCEP 347
Query: 367 ISFYVPRKSEVFQDDIYPDAPSSKPALSAAEWVEGKSVDGPILFKLQTLY 416
I+ VPRKS++FQ+D+YP PAL+A EW+ G+ GP+L L+ Y
Sbjct: 348 IAMTVPRKSDLFQEDLYPPTAGPDPALTAEEWLGGRDA-GPLLISLKDGY 396
>7302313 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 528
Score = 297 bits (760), Expect = 4e-80
Identities = 163/410 (39%), Positives = 246/410 (59%), Gaps = 16/410 (3%)
Query: 13 ISGRFVRASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFA 72
+S R VR+SK+RHVYGQ K+E Y+N+R++ ++WDS N K++++ S+GGGAF
Sbjct: 1 MSFRVVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPKFLAIIVESAGGGAFI 60
Query: 73 VIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEY 132
V+P +VG+I PL GH VLD + P ND+++ASGS+D + +W+IP D GL
Sbjct: 61 VLPHNKVGRIAADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIP-DGGLSRT 119
Query: 133 VDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL- 191
+ E PV L H R+VG +L+HP A N+L ++ D V IW++ E+ +
Sbjct: 120 LTE--------PVVDLVFHQRRVGLVLWHPSALNVLLTAGSDNQVVIWNVGTGEILVHID 171
Query: 192 KHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDK 251
HPD+V S F++DG LVT +DKK+R++D R ++ SE H G+K R ++L
Sbjct: 172 SHPDIVYSACFNWDGSKLVTTCKDKKIRIYDPRTAELESEAMCHEGSKATRAIFLRH-GL 230
Query: 252 VATTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGN 311
+ TTGF+R S+RQ + L + + +D S+G++ P YD ++Y+ GKGD
Sbjct: 231 IFTTGFNRSSERQYSLRAPDALNEPIV--MVELDTSNGVMFPLYDADTNMIYLCGKGDSV 288
Query: 312 IRYFEFQNDE--LYELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEPISF 369
IRYFE + ++ ++ +Q+TEPQRG + PKR +V EV K Y+ + IS
Sbjct: 289 IRYFEVTPEPPFVHYINTFQTTEPQRGIGLMPKRGCDVTTCEVAKFYRMNNNGLCQVISM 348
Query: 370 YVPRKSEVFQDDIYPDAPSSKPALSAAEWVEGKSVDGPILFKLQTLYDGS 419
VPRKS++FQ+D+YPD + A++A EW++GK D PI F L+ Y S
Sbjct: 349 TVPRKSDLFQEDLYPDTLAEDAAITAEEWIDGKDAD-PITFSLKGGYVSS 397
>Hs16554585 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 525
Score = 293 bits (750), Expect = 6e-79
Identities = 167/424 (39%), Positives = 251/424 (58%), Gaps = 28/424 (6%)
Query: 19 RASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFAVIPVKE 78
R+SK+RHV+G+PA KE Y+++ IT + D++ N +I+V +GGGAF VIP+ +
Sbjct: 8 RSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQ 67
Query: 79 VGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDY---GLHEYVDE 135
GK+ P GH VLD ++PF+D +AS S+D I IW IP+ L Y E
Sbjct: 68 TGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127
Query: 136 EGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK--- 192
L GH+R+VG + +HP A NIL S+ DY V IW++ +E T
Sbjct: 128 ------------LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMST 175
Query: 193 ---HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDT 249
H D++ SMSF+ +G L T +D+K+RV D RA ++ E ++ G + +V++LG+
Sbjct: 176 ISCHQDVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVLQEA-SYKGHRASKVLFLGNL 234
Query: 250 DKVATTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGD 309
K+ +TG SR ++RQ+ +WD NL + ++D SSG+L PFYD +LYV GKGD
Sbjct: 235 KKLMSTGTSRWNNRQVALWDQDNLSVPLME--EDLDGSSGVLFPFYDADTSMLYVVGKGD 292
Query: 310 GNIRYFEFQNDE--LYELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAV-GEHAVEP 366
GNIRY+E D+ L L+EY+S PQ+G V PKR ++V E+ + YK + + +EP
Sbjct: 293 GNIRYYEVSADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEP 352
Query: 367 ISFYVPRKSEVFQDDIYPDAPSSKPALSAAEWVEGKSVDGPILFKLQTLYDGSEPEFTDS 426
IS VPR+SE +Q+DIYP ++P+L+A EW+ G + D PIL L+ + P +
Sbjct: 353 ISMIVPRRSESYQEDIYPPTAGAQPSLTAQEWLSGMNRD-PILVSLRPGSELLRPHPLPA 411
Query: 427 KKPV 430
++P+
Sbjct: 412 ERPI 415
>Hs16554583 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 525
Score = 293 bits (749), Expect = 8e-79
Identities = 167/424 (39%), Positives = 251/424 (58%), Gaps = 28/424 (6%)
Query: 19 RASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFAVIPVKE 78
R+SK+RHV+G+PA KE Y+++ IT + D++ N +I+V +GGGAF VIP+ +
Sbjct: 8 RSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQ 67
Query: 79 VGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDY---GLHEYVDE 135
GK+ P GH VLD ++PF+D +AS S+D I IW IP+ L Y E
Sbjct: 68 TGKLDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKE 127
Query: 136 EGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK--- 192
L GH+R+VG + +HP A NIL S+ DY V IW++ +E T
Sbjct: 128 ------------LVGHARRVGLVEWHPTAANILFSAGYDYKVMIWNLDTKESVITSPMST 175
Query: 193 ---HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDT 249
H D++ SMSF+ +G L T +D+K+RV D RA ++ E ++ G + +V++LG+
Sbjct: 176 ISCHQDVILSMSFNTNGSLLATTCKDRKIRVIDPRAGTVLQEA-SYKGHRASKVLFLGNL 234
Query: 250 DKVATTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGD 309
K+ +TG SR ++RQ+ +WD NL + ++D SSG+L PFYD +LYV GKGD
Sbjct: 235 KKLMSTGTSRWNNRQVALWDQDNLSVPLME--EDLDGSSGVLFPFYDADTSMLYVVGKGD 292
Query: 310 GNIRYFEFQNDE--LYELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAV-GEHAVEP 366
GNIRY+E D+ L L+EY+S PQ+G V PKR ++V E+ + YK + + +EP
Sbjct: 293 GNIRYYEVSADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLIEP 352
Query: 367 ISFYVPRKSEVFQDDIYPDAPSSKPALSAAEWVEGKSVDGPILFKLQTLYDGSEPEFTDS 426
IS VPR+SE +Q+DIYP ++P+L+A EW+ G + D PIL L+ + P +
Sbjct: 353 ISMIVPRQSESYQEDIYPPTAGAQPSLTAQEWLSGMNRD-PILVSLRPGSELLRPHPLPA 411
Query: 427 KKPV 430
++P+
Sbjct: 412 ERPI 415
>CE00590 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 605
Score = 266 bits (681), Expect = 6e-71
Identities = 141/391 (36%), Positives = 229/391 (58%), Gaps = 16/391 (4%)
Query: 16 RFVRASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFAVIP 75
+ VR SK+RHV+ +P K E ++R+T WDS N K+I+ N GG F VIP
Sbjct: 3 QIVRQSKFRHVFCKPVKHESCMSDIRVTEITWDSLFCDVNPKFIAFI-NRGAGGPFMVIP 61
Query: 76 VKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDE 135
V ++G++ P H A L+ +SPFND+++AS S+D +W IP D GL+ + E
Sbjct: 62 VNKIGRVDKDYPFVDAHKAPCLEVAWSPFNDNVIASCSEDTTCKVWVIP-DRGLNRNLSE 120
Query: 136 EGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HP 194
P L+GH ++V + +HP+A N+L ++ + + +W++ E + HP
Sbjct: 121 --------PAVELTGHQKRVNTIAWHPVANNVLLTAGGENVMFMWNVGTGEALLEISGHP 172
Query: 195 DMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVAT 254
D + S++F++DG VT +DKK+R+ D ++V EG H G K QR +++ D + +
Sbjct: 173 DQIWSINFNFDGSQFVTTCKDKKIRILDSHTGEVVHEGMGHEGVKPQRAIFVKD-GLILS 231
Query: 255 TGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRY 314
TGF++ S+R + +L + +D S+G++ PFYD+ + ++Y+ GKGD IRY
Sbjct: 232 TGFTKRSERLYALRAPEDLSTPIVEE--ELDTSNGVVFPFYDEDSGLVYLVGKGDCAIRY 289
Query: 315 FEFQNDELYE--LSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEPISFYVP 372
+E ND Y ++ Y + EPQR KR ++ +ENE+ + YK + V+ + F+VP
Sbjct: 290 YEVNNDAPYVHYINTYTTNEPQRAVGFQSKRGMSSEENEINRIYKLTTKGVVDILQFFVP 349
Query: 373 RKSEVFQDDIYPDAPSSKPALSAAEWVEGKS 403
RKS++FQ D+YPD S+ PAL+A E++EGK+
Sbjct: 350 RKSDLFQHDLYPDTRSTIPALTAEEFMEGKN 380
>Hs22054763 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 377
Score = 237 bits (605), Expect = 4e-62
Identities = 134/332 (40%), Positives = 199/332 (59%), Gaps = 15/332 (4%)
Query: 19 RASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFAVIPVKE 78
R+SK+R+VYG+ A +E ++ + IT N D++ N +++++ S+GGG+F VIP+++
Sbjct: 8 RSSKFRNVYGKVANREHCFDGIPITKNVHDNHFCAVNTRFLAIVTESAGGGSFLVIPLEQ 67
Query: 79 VGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGN 138
G+I P GH VLD ++PF D+I+AS S+D + IWEIPE GL + E
Sbjct: 68 TGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEG-GLKRNMTE--- 123
Query: 139 PKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDIS-QEEVKFTLKHPDMV 197
+ L GHSR+VG + +HP NIL S+ DY V IW++ E VK H D++
Sbjct: 124 -----ALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNLDVGEPVKMIDCHTDVI 178
Query: 198 TSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGF 257
MSF+ DG L T +DKKLRV + R+ +++ E + N RVV+LG+ ++ TTG
Sbjct: 179 LCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNHRVN-RVVFLGNMKRLLTTGV 237
Query: 258 SRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEF 317
SR + RQI +WD +L + +D SG+L PFYD +LY+AGKGDGNIRY+E
Sbjct: 238 SRWNTRQIALWDQEDLSMPLIE--EEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEI 295
Query: 318 QNDELY--ELSEYQSTEPQRGFAVAPKRSVNV 347
++ Y L E++S PQ+G V PK ++V
Sbjct: 296 STEKPYLSYLMEFRSPAPQKGLGVMPKHGLDV 327
>7290756 [Z] KOG1445 Tumor-specific antigen (contains WD repeats)
Length = 1074
Score = 202 bits (514), Expect = 1e-51
Identities = 131/392 (33%), Positives = 208/392 (52%), Gaps = 23/392 (5%)
Query: 19 RASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFAVIPVKE 78
+ASKY++ K E + + S N I +G +++ NW +G AV+P+ +
Sbjct: 6 KASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGAFMAFNWEHTGSSV-AVLPLDD 64
Query: 79 VGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGN 138
G+ +PL GHT V D FSPF+D ++A+ S D + IW IPE GL + + +
Sbjct: 65 CGRKSKTMPLLHGHTDTVTDLKFSPFHDGLLATASQDCLVKIWHIPEK-GLEQSLSD--- 120
Query: 139 PKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDIS-QEEVKFTLKHPDMV 197
P + S R+V + FHP A+ ++ S++ V ++D+S Q+E+ +HP+++
Sbjct: 121 -----PEAIFSHKQRRVETVGFHPTADGLMYSTAAG-CVALFDLSTQKEIFSNNEHPEVI 174
Query: 198 TSMSFSYDGKHLVTVSRDKKLRVWDVRA--EKIVSEGPAHSGAKNQRVVWLGDTDKVATT 255
S S+ DG L T +DK +R++D RA I +H K+ RVVWLG+ ++ TT
Sbjct: 175 QSASWREDGSVLATSCKDKNVRIFDPRAAGSPIQLTAESHQSIKDSRVVWLGNQHRILTT 234
Query: 256 GFSRLSDRQIGVWDA--FNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIR 313
GF RQ+ + D FN + L +D S+GILMP +D +L++AGKGD I
Sbjct: 235 GFDAARLRQVIIRDVRNFNTPEKTL----ELDCSTGILMPLFDPDTNMLFLAGKGDTTIN 290
Query: 314 YFEFQNDELYELSEYQST-EPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEPISFYVP 372
Y E + + Y + + T E +G + PKR++ V E EV + + + + V PI + VP
Sbjct: 291 YLEITDKDPYLIEGLRHTGEQTKGACLVPKRALKVMEAEVNRVLQ-LTSNMVIPIMYQVP 349
Query: 373 RKS-EVFQDDIYPDAPSSKPALSAAEWVEGKS 403
RK+ F D+YP+ K L A EW+ G +
Sbjct: 350 RKTYRDFHADLYPETTGYKTELVAGEWLNGSN 381
Score = 192 bits (487), Expect = 2e-48
Identities = 131/399 (32%), Positives = 204/399 (50%), Gaps = 21/399 (5%)
Query: 17 FVRASKYRHVYGQPAKKELQYENLRITSNA--WDSNLIKCNGKYISVNWNSSGGGAFAVI 74
F + SK+RH+ G P K ENLR S + N N + ++V S GG A+
Sbjct: 614 FGKVSKFRHLKGTPGHKSTHIENLRNLSRQIPGECNGFHANQERVAVPL-SGPGGKIAIF 672
Query: 75 PVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVD 134
+ G++PD V + + ++D + PF+ +A DDG + IW I E GL E +
Sbjct: 673 ELSRPGRLPDGVIPSLVNGSNIMDFQWDPFDAQRLAVACDDGIVKIWHI-EAGGLSEPTN 731
Query: 135 EEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-H 193
P L+ H K+ + FHPLA ++L ++S D T+K+WD+ K +L H
Sbjct: 732 T--------PAGELTAHLDKIYFIRFHPLAADVLLTASYDMTIKLWDLRTMTEKCSLSGH 783
Query: 194 PDMVTSMSFSYDGKHLVTVSRDKKLRVWDVR-AEKIVSEGPAHSGAKNQRVVWLGDTDKV 252
D + ++S G+ TV +D K+RV++ R +E + EG G + R+ W + +
Sbjct: 784 TDQIFDFAWSPCGRLGATVCKDGKIRVYNPRKSETPIREGNGPVGTRGARITWALEGHYI 843
Query: 253 ATTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNI 312
TGF ++S+RQI V++A L ++D S IL+PFYD+ + L+V GKGD I
Sbjct: 844 VCTGFDKVSERQISVYNAQKLSAPL--NTASLDVSPSILIPFYDEDSSTLFVTGKGDSTI 901
Query: 313 RYFEFQNDELY--ELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEPISFY 370
+E ++E Y LS ++ T +G + K +V E KAY+ +EP+SF
Sbjct: 902 YCYEITDEEPYICPLSHHRCTSLHQGLSFLTKNHCDVASVEFSKAYRLTNT-TIEPLSFT 960
Query: 371 VPR-KSEVFQDDIYPDAPSSKPA-LSAAEWVEGKSVDGP 407
VPR KSE+FQDD++P + A LS+ +W P
Sbjct: 961 VPRIKSELFQDDLFPPTRITWSATLSSEDWFASNDKAAP 999
>Hs13375690 [Z] KOG1445 Tumor-specific antigen (contains WD repeats)
Length = 925
Score = 201 bits (512), Expect = 2e-51
Identities = 129/402 (32%), Positives = 221/402 (54%), Gaps = 21/402 (5%)
Query: 20 ASKYRHVYGQPAKKELQYENLR--ITSNAWDSNLIKCNGKYISVNWNSSGGGAFAVIPVK 77
+SK+RH G ++ NL+ + +S+ N ++V SSGG AV+ ++
Sbjct: 470 SSKFRHAQGTVLHRDSHITNLKGLNLTTPGESDGFCANKLRVAVPLLSSGGQV-AVLELR 528
Query: 78 EVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEG 137
+ G++PD + A V D + PF+ H +A +D +I +W +P + GL E +
Sbjct: 529 KPGRLPDTALPTLQNGAAVTDLAWDPFDPHRLAVAGEDARIRLWRVPAE-GLEEVLTT-- 585
Query: 138 NPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDM 196
P +L+GH+ K+ L FHPLA N+LASSS D TV+IWD+ + L+ H D
Sbjct: 586 ------PETVLTGHTEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQDQ 639
Query: 197 VTSMSFSYDGKHLVTVSRDKKLRVWDVRA-EKIVSEGPAHSGAKNQRVVWLGDTDKVATT 255
+ S+++S DG+ L TV +D ++RV+ R+ + + EGP G + R+VW+ D + +
Sbjct: 640 IFSLAWSPDGQQLATVCKDGRVRVYRPRSGPEPLQEGPGPKGGRGARIVWVCDGRCLLVS 699
Query: 256 GFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYF 315
GF S+RQ+ +++A L G L +D + L+P YD ++ + GKGD + +
Sbjct: 700 GFDSQSERQLLLYEAEALAGGPL-AVLGLDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLY 758
Query: 316 EF--QNDELYELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEPISFYVPR 373
E ++ E + + S +P +G + PK +V+E E+++ + + + ++EP++F +PR
Sbjct: 759 ELLPESPFFLECNSFTSPDPHKGLVLLPKTECDVREVELMRCLR-LRQSSLEPVAFRLPR 817
Query: 374 -KSEVFQDDIYPD-APSSKPALSAAEWVEGKSVDGPILFKLQ 413
+ E FQDD++PD A +P LSA W++G + P L LQ
Sbjct: 818 VRKEFFQDDVFPDTAVIWEPVLSAEAWLQGTN-GQPWLLSLQ 858
Score = 177 bits (448), Expect = 6e-44
Identities = 115/389 (29%), Positives = 202/389 (51%), Gaps = 24/389 (6%)
Query: 19 RASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFAVIPVKE 78
R SK+RH +P ++E ++R + N IK + I+ +NS G ++P++
Sbjct: 5 RVSKFRHTEARPPRRESWISDIRAGTAPSCRNHIKSSCSLIA--FNSDRPGVLGIVPLQG 62
Query: 79 VGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGN 138
G+ +V H+ V D DFSPF+D ++A+GS D + +W +P G
Sbjct: 63 QGEDKRRVAHLGCHSDLVTDLDFSPFDDFLLATGSADRTVKLWRLP----------GPGQ 112
Query: 139 PKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL-KHPDMV 197
P +L V L FHP ++ IL S++ TVK+WD ++++ L H D+V
Sbjct: 113 ALPSAPGVVLGPEDLPVEVLQFHPTSDGILVSAA-GTTVKVWDAAKQQPLTELAAHGDLV 171
Query: 198 TSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEG-PAHSGAKNQRVVWLGDTDKVATTG 256
S +S DG + T +DK+LR++D R + S+ AH +++ R+ W+G + + +TG
Sbjct: 172 QSAVWSRDGALVGTACKDKQLRIFDPRTKPRASQSTQAHENSRDSRLAWMGTWEHLVSTG 231
Query: 257 FSRLSDRQIGVWDA--FNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRY 314
F+++ +R++ +WD F+ +L +D S G L+P D + +L +AGKG+ +
Sbjct: 232 FNQMREREVKLWDTRFFSSALASL----TLDTSLGCLVPLLDPDSGLLVLAGKGERQLYC 287
Query: 315 FEF--QNDELYELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEPISFYVP 372
+E Q L +++ RG A+ P++++ V EVL+ + + + A+ PI ++VP
Sbjct: 288 YEVVPQQPALSPVTQCVLESVLRGAALVPRQALAVMGCEVLRVLQ-LSDTAIVPIGYHVP 346
Query: 373 RKSEVFQDDIYPDAPSSKPALSAAEWVEG 401
RK+ F +D++PD PA W G
Sbjct: 347 RKAVEFHEDLFPDTAGCVPATDPHGWWAG 375
>CE19273 [Z] KOG1445 Tumor-specific antigen (contains WD repeats)
Length = 1057
Score = 152 bits (384), Expect = 2e-36
Identities = 108/394 (27%), Positives = 203/394 (51%), Gaps = 27/394 (6%)
Query: 21 SKYRHVYGQPAKKE-LQYENLRITSNAW--DSNLIKCNGKYISVNWNSSGGGAFAVIPVK 77
SK+RHV GQ K + NLR + +SN + C+ K+ +V +G G + V
Sbjct: 555 SKFRHVDGQQGTKSGAVFSNLRNVNTRLPPESNGVCCSNKFAAVPL--AGLGVIGIYDVN 612
Query: 78 EVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEG 137
E GK+PD V + V D ++PF+D +A G+D G+I +W + + +G
Sbjct: 613 EPGKLPDGVMDGIFNKTLVTDLHWNPFDDEQLAVGTDCGQINLWRLTTN---------DG 663
Query: 138 NPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEV-KFTLKHPDM 196
+++P +++ K+ L +HPLA ++LA + + T+++WD++ ++ + H
Sbjct: 664 PRNEMEPEKIIKIGGEKITSLRWHPLASDLLAVALSNSTIELWDVANAKLYSRFVNHTGG 723
Query: 197 VTSMSFSYDGKHLVTVSRDKKLRVWD--VRAEKIVSEGPAHSGAKNQRVVWLGDTDKVAT 254
+ +++S DG+ + +V +D L V + R +++ + RV++ D V
Sbjct: 724 ILGIAWSADGRRIASVGKDATLFVHEPASREQRVYERKTVVESTRAARVLFACDDRIVIV 783
Query: 255 TGFSRLSDRQIGVWDAFNLEKGNLGGFYN--VDQSSGILMPFYDDSNRILYVAGKGDGNI 312
G ++ S RQ+ ++DA ++ L Y +D ++ L+P YD + +L+++GKGD +
Sbjct: 784 VGMTKSSQRQVQMYDAQTVD---LRHIYTQVIDSATQPLVPHYDYDSNVLFLSGKGDRFV 840
Query: 313 RYFE--FQNDELYELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEPISFY 370
FE + + L L+ + S +G A K NV E ++ + + +E I+F
Sbjct: 841 NMFEVIYDSPYLLPLAPFMSPVGSQGIAFHQKLKCNVMAVEFQVCWR-LSDKNLEKITFR 899
Query: 371 VPR-KSEVFQDDIYPDA-PSSKPALSAAEWVEGK 402
VPR K +VFQDD++PD+ + +P + +W+ G+
Sbjct: 900 VPRIKKDVFQDDLFPDSLVTWEPVTTGTKWMLGE 933
Score = 116 bits (291), Expect = 1e-25
Identities = 105/394 (26%), Positives = 192/394 (48%), Gaps = 34/394 (8%)
Query: 20 ASKYRHVYGQPAKKELQYENLRITSNAWDSNLIKCNGKYISVNWNSSGGGAFAVIPVKEV 79
ASK+++ + KKE ++ + + + ++ I + +++ + GG V+P+
Sbjct: 7 ASKFKNTTPKVPKKEETIFDVPVGNLSCTNDGIHASADFLAFHIEGEGG-KLGVLPITAK 65
Query: 80 GK-IPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGN 138
G+ + + + H QV D F F D ++A+ S D + IW++ D+ +
Sbjct: 66 GRRTRNDIGIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDH----------S 115
Query: 139 PKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKH-PDMV 197
PK + + G + L H A+NILA S T I DIS + L D V
Sbjct: 116 PKLATEIDV-GGGNVIAECLRAHSTADNILAVGSHGSTY-ITDISTGKTAVELSGVTDKV 173
Query: 198 TSMSFSYDGKHLVTVSRDK--KLRVWDVRAE-KIVSEGPAHSG-AKNQRVVWLGDTDKVA 253
SM +S DGK L+ VS DK ++ V+D RA + + H G + RV++ G+ ++
Sbjct: 174 QSMDWSEDGK-LLAVSGDKGRQIVVYDPRASMEPIQTLEGHGGMGREARVLFAGN--RLI 230
Query: 254 TTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQ---SSGILMPFYDDSNRILYVAGKGDG 310
+TGF+ +++ +D G G + + ++G+L+P YD R+++++GKG
Sbjct: 231 STGFTTKRIQEVRAYDT-----GKWGAPVHTQEFVSTTGVLIPHYDADTRLVFLSGKGTN 285
Query: 311 NIRYFEFQNDELYELSEYQSTEPQR--GFAVAPKRSVNVKENEVLKAYKAVGEHAVEPIS 368
+ E Q+ + Y ++ T P++ G + KR V+V + EV Y + + ++ P
Sbjct: 286 KLFMLEMQDRQPYLSHVFELTLPEQTLGATIGAKRRVHVMDGEV-DTYYQLTKSSIVPTP 344
Query: 369 FYVPRKS-EVFQDDIYPDAPSSKPALSAAEWVEG 401
VPR+S F D++P+ ++P +A EW+ G
Sbjct: 345 CIVPRRSYRDFHSDLFPETRGAEPGCTAGEWLNG 378
>Hs14249582 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 285
Score = 125 bits (314), Expect = 2e-28
Identities = 61/135 (45%), Positives = 90/135 (66%), Gaps = 4/135 (2%)
Query: 284 VDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQNDE--LYELSEYQSTEPQRGFAVAP 341
+D S+G+L+PFYD + I+Y+ GKGD +IRYFE ++ ++ L+ + S EPQRG P
Sbjct: 77 MDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPPFVHYLNTFSSKEPQRGMGFMP 136
Query: 342 KRSVNVKENEVLKAYKAVGEHAVEPISFYVPRKSEVFQDDIYPDAPSSKPALSAAEWVEG 401
KR ++V + E+ + YK + E EPI VPRKS++FQDD+YPD P +PAL A EW+ G
Sbjct: 137 KRGLDVSKCEIARFYK-LHERKCEPIIMTVPRKSDLFQDDLYPDTPGPEPALEADEWLSG 195
Query: 402 KSVDGPILFKLQTLY 416
+ + P+L L+ Y
Sbjct: 196 QDAE-PVLISLRDGY 209
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 82.4 bits (202), Expect = 2e-15
Identities = 60/227 (26%), Positives = 112/227 (48%), Gaps = 34/227 (14%)
Query: 55 NGKYISVNWNSSGGGAFAVIPVKEVG----KIPDQVPLFRGHTAQVLDTDFSPFNDHIVA 110
+G + +++N+ G F+ K V + ++V +GHT+ V + + +V
Sbjct: 109 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARKSPQLVC 168
Query: 111 SGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILAS 170
+GSDDG + +W+I + + + + + +V + F+ ++ I+ S
Sbjct: 169 TGSDDGTVKLWDIRKKAAIQTFQN-----------------TYQVLAVTFNDTSDQII-S 210
Query: 171 SSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVR----A 225
+D +K+WD+ Q ++ +T++ H D VT +S S +G +L++ + D +RVWDVR
Sbjct: 211 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 270
Query: 226 EKIVS--EGPAHSGAKN-QRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
E+ V +G H+ KN R W D K+A +DR + VWD
Sbjct: 271 ERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGS----ADRFVYVWD 313
Score = 54.3 bits (129), Expect = 6e-07
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKF-TLK-HPDMVTSMS 201
P+ +LSGH +V FHP + LAS+ D + +W++ + + TLK H V +
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 116
Query: 202 FSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS 261
++ DG L + S DK + VWD + V H+ N V T
Sbjct: 117 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARKSPQLVCTGS----D 172
Query: 262 DRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQNDE 321
D + +WD +K + F N Q + + F D S++I ++G D +I+ ++ + ++
Sbjct: 173 DGTVKLWDI--RKKAAIQTFQNTYQV--LAVTFNDTSDQI--ISGGIDNDIKVWDLRQNK 226
Query: 322 L 322
L
Sbjct: 227 L 227
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 82.0 bits (201), Expect = 3e-15
Identities = 60/227 (26%), Positives = 111/227 (48%), Gaps = 34/227 (14%)
Query: 55 NGKYISVNWNSSGGGAFAVIPVKEVG----KIPDQVPLFRGHTAQVLDTDFSPFNDHIVA 110
+G + +++N+ G F+ K V + ++V +GHT+ V + +V
Sbjct: 109 SGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC 168
Query: 111 SGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILAS 170
+GSDDG + +W+I + + + + + +V + F+ ++ I+ S
Sbjct: 169 TGSDDGTVKLWDIRKKAAIQTFQN-----------------TYQVLAVTFNDTSDQII-S 210
Query: 171 SSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVR----A 225
+D +K+WD+ Q ++ +T++ H D VT +S S +G +L++ + D +RVWDVR
Sbjct: 211 GGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 270
Query: 226 EKIVS--EGPAHSGAKN-QRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
E+ V +G H+ KN R W D K+A +DR + VWD
Sbjct: 271 ERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGS----ADRFVYVWD 313
Score = 53.9 bits (128), Expect = 8e-07
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKF-TLK-HPDMVTSMS 201
P+ +LSGH +V FHP + LAS+ D + +W++ + + TLK H V +
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNG-STLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELH 116
Query: 202 FSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS 261
++ DG L + S DK + VWD + V H+ N V T
Sbjct: 117 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGS----D 172
Query: 262 DRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQNDE 321
D + +WD +K + F N Q + + F D S++I ++G D +I+ ++ + ++
Sbjct: 173 DGTVKLWDI--RKKAAIQTFQNTYQV--LAVTFNDTSDQI--ISGGIDNDIKVWDLRQNK 226
Query: 322 L 322
L
Sbjct: 227 L 227
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 79.7 bits (195), Expect = 1e-14
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 24/186 (12%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
L++GH V D D SP++ + ASGS D +W Y P+R+
Sbjct: 379 LYQGHAYPVWDLDISPYSLYF-ASGSHDRTARLWSFDRTY----------------PLRI 421
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ-EEVKFTLKHPDMVTSMSFSYDG 206
+GH V + FHP N LA+ S D TV++W Q V+ H V S++FS +G
Sbjct: 422 YAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG 480
Query: 207 KHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIG 266
K+L + D++L++WD+ + + E H+ + + D+ +A+ D +
Sbjct: 481 KYLASAGEDQRLKLWDLASGTLYKELRGHTD-NITSLTFSPDSGLIASASM----DNSVR 535
Query: 267 VWDAFN 272
VWD N
Sbjct: 536 VWDIRN 541
>Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 655
Score = 79.0 bits (193), Expect = 2e-14
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 32/236 (13%)
Query: 42 ITSNAWDSNLIKCNGKYIS--VNWNSSG-----GGAFAVIPVKEVGKIPDQVPLFRGHTA 94
+T AW I + +S V +SG GG + + + K P+ + GHT+
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINK-PNCIMSLTGHTS 64
Query: 95 QVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRK 154
V + + IVA GS G I +W++ + K +R L G
Sbjct: 65 PVESVRLNTPEELIVA-GSQSGSIRVWDL----------------EAAKILRTLMGLKAN 107
Query: 155 VGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVS 213
+ L FHP E +AS S D +K+WDI ++ F + H V + FS DGK L + +
Sbjct: 108 ICSLDFHPYGE-FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA 166
Query: 214 RDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
D +++WD+ A K++SE P H+G N VV + + +G SD I WD
Sbjct: 167 DDHTVKLWDLTAGKMMSEFPGHTGPVN--VVEFHPNEYLLASG---SSDGTIRFWD 217
Score = 53.9 bits (128), Expect = 8e-07
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 24/152 (15%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
G A + DF P+ + VASGS D I +W+I + Y G
Sbjct: 103 GLKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRKGCVFRY----------------RG 145
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
HS+ V L F P + LAS++ D+TVK+WD++ ++ H V + F + L
Sbjct: 146 HSQAVRCLRFSPDGK-WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 210 VTVSRDKKLRVWDVRAEKIVSE-----GPAHS 236
+ S D +R WD+ ++VS GP S
Sbjct: 205 ASGSSDGTIRFWDLEKFQVVSRIEGEPGPVRS 236
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 77.0 bits (188), Expect = 9e-14
Identities = 57/185 (30%), Positives = 93/185 (49%), Gaps = 16/185 (8%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
V F+GHT +V + P + ++AS SDD + IW + +D +H D + + K++ +
Sbjct: 352 VKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQDACVH---DLQAHSKEIYTI 407
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSY 204
+ G +P + +LAS+S D TV++WD+ Q TL KH + V S++FS
Sbjct: 408 KW-----SPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSP 462
Query: 205 DGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQ 264
DGK+L + S DK + +W+ ++ +V G V W DKV + SD
Sbjct: 463 DGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGGI--FEVCWNARGDKVGASA----SDGS 516
Query: 265 IGVWD 269
+ V D
Sbjct: 517 VCVLD 521
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 77.0 bits (188), Expect = 9e-14
Identities = 62/214 (28%), Positives = 100/214 (45%), Gaps = 25/214 (11%)
Query: 68 GGAFAVIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDY 127
GG + + +GK P+ + GH++ + F ++ +VA+G+ G I +W++ E
Sbjct: 128 GGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFDA-SEGLVAAGAASGTIKLWDLEE-- 183
Query: 128 GLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEV 187
K VR L+GH + FHP E AS SLD +KIWDI ++
Sbjct: 184 --------------AKVVRTLTGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIRKKGC 228
Query: 188 KFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWL 246
T K H V + F+ DG+ +V+ D ++VWD+ A K++ E +H G K Q + +
Sbjct: 229 IHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG-KIQSLDFH 287
Query: 247 GDTDKVATTGFSRLSDRQIGVWDAFNLEKGNLGG 280
+AT +D+ + WD E GG
Sbjct: 288 PHEFLLATGS----ADKTVKFWDLETFELIGSGG 317
>7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 700
Score = 75.9 bits (185), Expect = 2e-13
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 22/199 (11%)
Query: 43 TSNAWDSNLIKCNGKY-------ISVNWNSSGGGAFAV----IPVKEVGKIPDQVPLFRG 91
T+ WD++ +C ++ + V+W ++ A I V +G + + + F+G
Sbjct: 474 TTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLG-VNEPIKTFKG 532
Query: 92 HTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGH 151
HT +V + P ++AS SDD + IW + D H D + + K++ ++
Sbjct: 533 HTNEVNAIKWCP-QGQLLASCSDDMTLKIWSMNRDRCCH---DLQAHSKEIYTIKW---- 584
Query: 152 SRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSYDGKHLV 210
G +P ILAS+S D TV++WD+ + TL KH + V S++FS DGKHL
Sbjct: 585 -SPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLA 643
Query: 211 TVSRDKKLRVWDVRAEKIV 229
+ S DK + +W + ++V
Sbjct: 644 SGSFDKCVHIWSTQTGQLV 662
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 75.1 bits (183), Expect = 3e-13
Identities = 62/214 (28%), Positives = 101/214 (46%), Gaps = 25/214 (11%)
Query: 68 GGAFAVIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDY 127
GG + + +GK P+ + GH++ + F ++ +VA+G+ G I +W++ E
Sbjct: 35 GGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFDA-SEVLVAAGAASGTIKLWDLEE-- 90
Query: 128 GLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEV 187
K VR L+GH + FHP E AS SLD +KIWDI ++
Sbjct: 91 --------------AKIVRTLTGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKKGC 135
Query: 188 KFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWL 246
T K H V + F+ DG+ +V+ D ++VWD+ A K+++E +H G + Q + +
Sbjct: 136 IHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG-QIQSLDFH 194
Query: 247 GDTDKVATTGFSRLSDRQIGVWDAFNLEKGNLGG 280
+AT +DR + WD E GG
Sbjct: 195 PHEFLLATGS----ADRTVKFWDLETFELIGSGG 224
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 74.3 bits (181), Expect = 6e-13
Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 30/189 (15%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
F+GH V S ++ SGSDD I IW+ + + H
Sbjct: 136 FKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPF------------ 183
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGK 207
+V + F E ++ S +D VKIWDI ++ V L+ H D +T MS S +G
Sbjct: 184 -----QVTAVCFGDTGEQVI-SGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGD 237
Query: 208 HLVTVSRDKKLRVWDVR----AEKIVS--EGPAHSGAKN-QRVVWLGDTDKVATTGFSRL 260
++T + D LRVWDVR E+ V +G H+ KN R W +DK+ S
Sbjct: 238 FILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKIT----SGS 293
Query: 261 SDRQIGVWD 269
+DR + +WD
Sbjct: 294 ADRHVYIWD 302
Score = 65.9 bits (159), Expect = 2e-10
Identities = 38/153 (24%), Positives = 67/153 (42%), Gaps = 17/153 (11%)
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
+ V GH+ V++ F+P HI S D + W+I +
Sbjct: 89 ENVMAMSGHSGAVMEAHFTPDGSHIFTC-STDKTLAFWDIATG----------------Q 131
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFS 203
R GH V + + +L S S D T+KIWD ++ TL+ P VT++ F
Sbjct: 132 RQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFG 191
Query: 204 YDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHS 236
G+ +++ D ++++WD+R + ++ HS
Sbjct: 192 DTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHS 224
Score = 54.7 bits (130), Expect = 5e-07
Identities = 38/129 (29%), Positives = 53/129 (40%), Gaps = 7/129 (5%)
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ--EEVKFTLKHPDMVTSMS 201
P+ L GH ++ FHP E +L SS D + IW + + E V H V
Sbjct: 47 PIMQLEGHEGEIFTAEFHPEGE-LLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAH 105
Query: 202 FSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS 261
F+ DG H+ T S DK L WD+ + H N + + + S
Sbjct: 106 FTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNS----VQGSRRGQQLLCSGSD 161
Query: 262 DRQIGVWDA 270
DR I +WDA
Sbjct: 162 DRTIKIWDA 170
>Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 485
Score = 73.9 bits (180), Expect = 8e-13
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 22/161 (13%)
Query: 109 VASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENIL 168
+ SGSDD + +W ED KP+ ++GH + +LF P I+
Sbjct: 344 LVSGSDDFTLFLWSPAEDK---------------KPLTRMTGHQALINQVLFSP-DSRIV 387
Query: 169 ASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEK 227
AS+S D ++K+WD + +L+ H V +++S D + LV+ S D L+VWDV+A+K
Sbjct: 388 ASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK 447
Query: 228 IVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVW 268
+ + P H+ + V W D +VA+ G D+ + +W
Sbjct: 448 LAMDLPGHAD-EVYAVDWSPDGQRVASGG----KDKCLRIW 483
Score = 53.9 bits (128), Expect = 8e-07
Identities = 34/83 (40%), Positives = 46/83 (54%), Gaps = 2/83 (2%)
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDG 206
L GHS V + F P + LAS S D TV+ WD+S E FT K H V S+S+S DG
Sbjct: 110 LEGHSEAVISVAFSPTGK-YLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 207 KHLVTVSRDKKLRVWDVRAEKIV 229
K L + ++ ++ +WD K V
Sbjct: 169 KKLASGCKNGQILLWDPSTGKQV 191
Score = 52.4 bits (124), Expect = 2e-06
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 35/174 (20%)
Query: 56 GKYISVNWNSSGGGAFAVIPVKEVGKIPDQVPLF--RGHTAQVLDTDFSPFNDHIVASGS 113
GKY++ SG G V + + P F +GH VL +SP + ASG
Sbjct: 126 GKYLA-----SGSGDTTV----RFWDLSTETPHFTCKGHRHWVLSISWSPDGKKL-ASGC 175
Query: 114 DDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV-RMLSGHSRKVGHLLFHPLAEN----IL 168
+G+I +W+ P K V R L+GHS+ + L + PL N +
Sbjct: 176 KNGQILLWD----------------PSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYV 219
Query: 169 ASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVW 221
ASSS D +V+IWD + + L H VT + + DG L + S+D+ ++VW
Sbjct: 220 ASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
>Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 577
Score = 73.9 bits (180), Expect = 8e-13
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 16/185 (8%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
V F+GHT +V + P + ++AS SDD + IW + ++ +H D + + K++ +
Sbjct: 405 VKTFQGHTNEVNAIKWDP-SGMLLASCSDDMTLKIWSMKQEVCIH---DLQAHNKEIYTI 460
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSY 204
+ G +P + +LAS+S D TV++WDI + TL KH + V S++FS
Sbjct: 461 KW-----SPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSP 515
Query: 205 DGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQ 264
DGK+L + S DK + +W+ ++ +V G V W DKV + SD
Sbjct: 516 DGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGGI--FEVCWNARGDKVGASA----SDGS 569
Query: 265 IGVWD 269
+ V D
Sbjct: 570 VCVLD 574
>At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 343
Score = 73.6 bits (179), Expect = 1e-12
Identities = 63/226 (27%), Positives = 99/226 (42%), Gaps = 40/226 (17%)
Query: 59 ISVNWNSSGGGAFAVIPVK-------EVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVAS 111
+ ++W S G + P K E GK Q+ H++ V + ++ S
Sbjct: 100 LDLHWTSDGSQIVSASPDKTVRAWDVETGK---QIKKMAEHSSFVNSCCPTRRGPPLIIS 156
Query: 112 GSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASS 171
GSDDG +W++ + + + D+ ++ + F A+ I +
Sbjct: 157 GSDDGTAKLWDMRQRGAIQTFPDKY-----------------QITAVSFSDAADKIF-TG 198
Query: 172 SLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEK--- 227
+D VK+WD+ + E TL+ H D +T MS S DG +L+T D KL VWD+R
Sbjct: 199 GVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQN 258
Query: 228 ---IVSEGPAHSGAKN-QRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
+ EG H+ KN + W D KV T G SDR + +WD
Sbjct: 259 RCVKIFEGHQHNFEKNLLKCSWSPDGTKV-TAG---SSDRMVHIWD 300
Score = 53.9 bits (128), Expect = 8e-07
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK--HPDMVTSMS 201
P+ +LSGH V + F+P A ++AS S D + +W + + F + H + + +
Sbjct: 45 PIMLLSGHPSAVYTMKFNP-AGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLH 103
Query: 202 FSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKN 240
++ DG +V+ S DK +R WDV K + + HS N
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVN 142
Score = 50.8 bits (120), Expect = 7e-06
Identities = 52/193 (26%), Positives = 84/193 (42%), Gaps = 28/193 (14%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
+ L GH + V F+P ++ASGS D +I +W + +G D K
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGT-LIASGSHDREIFLWRV---HG------------DCKNF 89
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI-SQEEVKFTLKHPDMVTSMSFSY 204
+L GH + L + I+ S+S D TV+ WD+ + +++K +H V S +
Sbjct: 90 MVLKGHKNAILDLHWTSDGSQIV-SASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTR 148
Query: 205 DGKHL-VTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDR 263
G L ++ S D ++WD+R + P + V + DK+ T G D
Sbjct: 149 RGPPLIISGSDDGTAKLWDMRQRGAIQTFP--DKYQITAVSFSDAADKIFTGGV----DN 202
Query: 264 QIGVWDAFNLEKG 276
+ VWD L KG
Sbjct: 203 DVKVWD---LRKG 212
>7294830 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 942
Score = 72.4 bits (176), Expect = 2e-12
Identities = 53/185 (28%), Positives = 86/185 (45%), Gaps = 24/185 (12%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
V +F GH A V F+P + A+ SDD +W + KP
Sbjct: 661 VVIFSGHLAPVCFVVFAP-RGYYFATASDDCTARVWM----------------QDNTKPA 703
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQE-EVKFTLKHPDMVTSMSFSY 204
R+L GH ++G LFHP + +A+ S D TV+IWDI + +V+ H +T++ +S
Sbjct: 704 RILQGHLAELGVCLFHP-NRHYMATGSADCTVRIWDIVKAVQVRIFRGHKSRITALIYSI 762
Query: 205 DGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQ 264
G++LV+ D + +WD E ++ H + N + L D + + G D Q
Sbjct: 763 CGRYLVSGGDDNLIMIWDTANEILMQFFDHHKASINTMEISL-DNNILVVGG----QDCQ 817
Query: 265 IGVWD 269
+ +WD
Sbjct: 818 LTLWD 822
>Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 514
Score = 71.6 bits (174), Expect = 4e-12
Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 26/238 (10%)
Query: 43 TSNAWDSNLIKCNGKY-------ISVNWNSSGGGAFAVIPVK-EVGKIPDQVPL--FRGH 92
T+ WD++ + ++ + V+W S+ A + V K+ P+ F+GH
Sbjct: 289 TTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGH 348
Query: 93 TAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHS 152
T +V + P +++AS SDD + IW + +D +H D + + K++ ++
Sbjct: 349 TNEVNAIKWDP-TGNLLASCSDDMTLKIWSMKQDNCVH---DLQAHNKEIYTIKW----- 399
Query: 153 RKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSYDGKHLVT 211
G +P A +LAS+S D TV++WD+ + TL KH + V S++FS DG++L +
Sbjct: 400 SPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLAS 459
Query: 212 VSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
S DK + +W+ + +V G V W DKV + SD + V D
Sbjct: 460 GSFDKCVHIWNTQTGALVHSYRGTGGI--FEVCWNAAGDKVGASA----SDGSVCVLD 511
>At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 613
Score = 71.2 bits (173), Expect = 5e-12
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Query: 75 PVKEVGKIPDQ-VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYV 133
P + IP+ V + GHT++V +SP + ++ASGS D IW IPE +
Sbjct: 246 PTSQTSHIPNSDVRILEGHTSEVCACAWSP-SASLLASGSGDATARIWSIPEGSFKAVHT 304
Query: 134 DEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKH 193
N LK + S K L +LA+ S D +IW ++ E + KH
Sbjct: 305 GRNINALILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGELISTLSKH 364
Query: 194 PDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSG 237
+ S+ ++ G +L+T S D+ VWDV+AE+ + HSG
Sbjct: 365 KGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSG 408
Score = 64.7 bits (156), Expect = 5e-10
Identities = 54/217 (24%), Positives = 100/217 (45%), Gaps = 17/217 (7%)
Query: 42 ITSNAWDSNLIKCNGKYISVNWNSSGGGAFA----VIPVKEVGKIPDQVPLFRGHTAQVL 97
+ + W +G + V+W ++ A + +I + ++G+ F GH +V
Sbjct: 394 VKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRP-AKTFTGHQGEVN 452
Query: 98 DTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGH 157
+ P ++AS SDD IW I + +H D + K++ +R G
Sbjct: 453 CVKWDPTGS-LLASCSDDSTAKIWNIKQSTFVH---DLREHTKEIYTIRW-----SPTGP 503
Query: 158 LLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDK 216
+P + LAS+S D TVK+WD ++ + H + V S++FS +G+++ + S DK
Sbjct: 504 GTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDK 563
Query: 217 KLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVA 253
+ +W ++ KIV + G V W + +K+A
Sbjct: 564 SIHIWSIKEGKIVKTYTGNGGI--FEVCWNKEGNKIA 598
>At1g10580 [S] KOG0282 mRNA splicing factor
Length = 616
Score = 71.2 bits (173), Expect = 5e-12
Identities = 52/181 (28%), Positives = 86/181 (46%), Gaps = 12/181 (6%)
Query: 139 PKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI--SQEEVKFTLKHPDM 196
PK L V SGH++ V + F P ++L S+ +D VKIWD+ S + ++ + H
Sbjct: 271 PKRL--VHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKA 328
Query: 197 VTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTG 256
V + FS DG +T DK ++ WD +++S S K VV L D
Sbjct: 329 VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVIS---TFSTGKIPYVVKLNPDDDKQNIL 385
Query: 257 FSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFE 316
+ +SD++I WD + G + Y+ + + F D++ R +V D ++R +E
Sbjct: 386 LAGMSDKKIVQWD---INTGEVTQEYDQHLGAVNTITFVDNNRR--FVTSSDDKSLRVWE 440
Query: 317 F 317
F
Sbjct: 441 F 441
>CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 412
Score = 70.9 bits (172), Expect = 6e-12
Identities = 54/190 (28%), Positives = 90/190 (46%), Gaps = 22/190 (11%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
F+GH++ D F ++ + S DD K+ +W++ + KP
Sbjct: 217 FKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLWDLRQS----------------KPQLTA 260
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVK-FTLK-HPDMVTSMSFS-YD 205
GH+ +V + F+P +E ILA+ S+D TV +WD+ K +TLK H D + +SFS +
Sbjct: 261 VGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHY 320
Query: 206 GKHLVTVSRDKKLRVWDV-RAEKIVSEGPAHSGAKNQRVVWL--GDTDKVATTGFSRLSD 262
L + D ++ VWD+ + + S A S + V+++ G T KVA ++
Sbjct: 321 ETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRP 380
Query: 263 RQIGVWDAFN 272
I D FN
Sbjct: 381 WTICSSDEFN 390
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 70.5 bits (171), Expect = 8e-12
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 50/225 (22%)
Query: 81 KIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEI----------------- 123
K ++ + GH+ V FSP +++++S S+DG + +W +
Sbjct: 531 KTASELKILYGHSGPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCLVGYKGHNYPVW 589
Query: 124 -----PEDY----GLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLD 174
P Y G H+ V +P+R+ +GH V FHP + N +A+ S D
Sbjct: 590 DTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS-NYVATGSAD 648
Query: 175 YTVKIWDISQEE-VKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGP 233
TV++WD+ V+ H + S++FS +G+ L T + D ++ +WD+ +V E
Sbjct: 649 RTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK 708
Query: 234 AHSGAKNQRVVWLGDTDKVATTGFSR--------LSDRQIGVWDA 270
H TD V + FSR D + +WDA
Sbjct: 709 GH-------------TDTVCSLRFSRDGEILASGSMDNTVRLWDA 740
>Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 70.1 bits (170), Expect = 1e-11
Identities = 51/185 (27%), Positives = 87/185 (46%), Gaps = 28/185 (15%)
Query: 46 AWDSNL----IKCNGKYISVNWNSSGGGAFAVIPVKEVGKIPDQVPLFRGHTAQVLDTDF 101
+W+SNL + + + W+ + G + GKI D +F GH+A V D +
Sbjct: 183 SWNSNLSGHLLSASDDHTVCLWDINAG--------PKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 102 SPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFH 161
++ + S +DD K+ IW D N KP ++ H+ +V L F+
Sbjct: 235 HLLHESLFGSVADDQKLMIW------------DTRSNTTS-KPSHLVDAHTAEVNCLSFN 281
Query: 162 PLAENILASSSLDYTVKIWDISQEEVKFTL--KHPDMVTSMSFS-YDGKHLVTVSRDKKL 218
P +E ILA+ S D TV +WD+ ++K H D + + +S ++ L + D++L
Sbjct: 282 PYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRL 341
Query: 219 RVWDV 223
VWD+
Sbjct: 342 NVWDL 346
>Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 69.7 bits (169), Expect = 1e-11
Identities = 44/151 (29%), Positives = 74/151 (48%), Gaps = 16/151 (10%)
Query: 76 VKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDE 135
V + GK+ D +F GHTA V D + ++ + S +DD K+ IW+ +
Sbjct: 210 VPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSN--------- 260
Query: 136 EGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL--KH 193
KP + H+ +V L F+P +E ILA+ S D TV +WD+ ++K H
Sbjct: 261 ----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH 316
Query: 194 PDMVTSMSFS-YDGKHLVTVSRDKKLRVWDV 223
D + + +S ++ L + D++L VWD+
Sbjct: 317 KDEIFQVQWSPHNETILASSGTDRRLNVWDL 347
Score = 55.5 bits (132), Expect = 3e-07
Identities = 50/186 (26%), Positives = 81/186 (42%), Gaps = 19/186 (10%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
RGH + ++P + S SDD I +W+I V +EG D K + +
Sbjct: 174 RGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISA-------VPKEGKVVDAKTI--FT 224
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK----HPDMVTSMSFS-Y 204
GH+ V + +H L E++ S + D + IWD H V +SF+ Y
Sbjct: 225 GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPY 284
Query: 205 DGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKV-ATTGFSRLSDR 263
L T S DK + +WD+R K+ + +V W + + A++G +DR
Sbjct: 285 SEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG----TDR 340
Query: 264 QIGVWD 269
++ VWD
Sbjct: 341 RLNVWD 346
>At5g25150 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 700
Score = 69.7 bits (169), Expect = 1e-11
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 22/157 (14%)
Query: 81 KIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPK 140
K+ + ++GH V D FSPF H AS S D IW +
Sbjct: 448 KLNANLVCYKGHNYPVWDAQFSPFG-HYFASCSHDRTARIWSMDR--------------- 491
Query: 141 DLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEE-VKFTLKHPDMVTS 199
++P+R+++GH V +HP N +A+ S D TV++WD+ E V+ + H MV S
Sbjct: 492 -IQPLRIMAGHLSDVD---WHPNC-NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLS 546
Query: 200 MSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHS 236
++ S DG+++ + D + +WD+ + ++ H+
Sbjct: 547 LAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHN 583
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 69.3 bits (168), Expect = 2e-11
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 29/221 (13%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GHT+ V F+ + +V +G+ G I +W++ E K VR +G
Sbjct: 5 GHTSPVDSVAFNS-EEVLVLAGASSGVIKLWDLEES----------------KMVRAFTG 47
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
H + FHP E LAS S D +++WD ++ T K H ++++ FS DG+ +
Sbjct: 48 HRSNCSAVEFHPFGE-FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWV 106
Query: 210 VTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
V+ D ++VWD+ A K++ E H G R + + + TG +DR + WD
Sbjct: 107 VSGGLDNVVKVWDLTAGKLLHEFKCHEGP--IRSLDFHPLEFLLATG---SADRTVKFWD 161
Query: 270 AFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDG 310
LE L G + + + F+ D + G DG
Sbjct: 162 ---LETFELIGTTRPEATGVRAIAFHPDGQTLF--CGLDDG 197
Score = 57.4 bits (137), Expect = 7e-08
Identities = 51/188 (27%), Positives = 79/188 (41%), Gaps = 35/188 (18%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
+ ++GHT + +FSP + V SG D + +W++ LHE+ EG P+
Sbjct: 84 IQTYKGHTRGISTIEFSP-DGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEG------PI 136
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-----------HP 194
R L FHPL E +LA+ S D TVK WD+ E+ T + HP
Sbjct: 137 RSLD----------FHPL-EFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHP 185
Query: 195 DMVTSMSFSYDGKHLVT----VSRDKKLRVWDVRAEKIVSEGP--AHSGAKNQRVVWLGD 248
D T DG + + + RD W + ++EG S +N +W+ D
Sbjct: 186 DGQTLFCGLDDGLKVYSWEPVICRDGVDMGWSTLGDFCINEGKFIGCSYYRNSVGIWVSD 245
Query: 249 TDKVATTG 256
++ G
Sbjct: 246 ISELEPYG 253
Score = 52.0 bits (123), Expect = 3e-06
Identities = 36/145 (24%), Positives = 64/145 (43%), Gaps = 19/145 (13%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
V F GH + +F PF + +ASGS D + +W+ + + Y
Sbjct: 42 VRAFTGHRSNCSAVEFHPFGE-FLASGSSDTNLRVWDTRKKGCIQTY------------- 87
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSY 204
GH+R + + F P ++ S LD VK+WD++ ++ K H + S+ F
Sbjct: 88 ---KGHTRGISTIEFSPDGRWVV-SGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHP 143
Query: 205 DGKHLVTVSRDKKLRVWDVRAEKIV 229
L T S D+ ++ WD+ +++
Sbjct: 144 LEFLLATGSADRTVKFWDLETFELI 168
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 68.9 bits (167), Expect = 2e-11
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 22/161 (13%)
Query: 109 VASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENIL 168
+ S SDD ++ +W+ P+ K KP+ + GH + V H F P I
Sbjct: 361 LVSASDDLQLILWD-PQ--------------KSTKPITKMHGHQKVVNHASFSPDGRCI- 404
Query: 169 ASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEK 227
A++S D +V++WD + TL+ H V ++S D + LV+ S+D L+VWDVR++K
Sbjct: 405 ATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKK 464
Query: 228 IVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVW 268
+ + P H + V W D +VA+ G +D+ + +W
Sbjct: 465 MKFDLPGHED-QVFAVDWSPDGQRVASGG----ADKAVRIW 500
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 68.9 bits (167), Expect = 2e-11
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 24/185 (12%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GHT+ V F + +V +G+ G I +W++ E K VR +G
Sbjct: 86 GHTSAVDSVAFDSA-EVLVLAGASSGVIKLWDVEE----------------AKMVRAFTG 128
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
H + FHP E LAS S D +KIWDI ++ T K H ++++ F+ DG+ +
Sbjct: 129 HRSNCSAVEFHPFGE-FLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWV 187
Query: 210 VTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
V+ D ++VWD+ A K++ E H G R + + + TG +DR + WD
Sbjct: 188 VSGGLDNVVKVWDLTAGKLLHEFKFHEGP--IRSLDFHPLEFLLATG---SADRTVKFWD 242
Query: 270 AFNLE 274
E
Sbjct: 243 LETFE 247
>CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 68.6 bits (166), Expect = 3e-11
Identities = 50/189 (26%), Positives = 91/189 (47%), Gaps = 28/189 (14%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
F+ HT V D + ++ S SDDG + + H+ +E K + +
Sbjct: 117 FKSHTDIVNSVDVNRRGPQMICSASDDGTVMV---------HDMRSKEAAKKFICKYQQT 167
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGK 207
+ + F+ A+N++ +D +K+WD+ + +V++ L H D +TS+S S++G
Sbjct: 168 A--------VTFNDAADNVICGG-IDNQIKVWDMLRNDVRYVLSGHRDTITSLSVSHNGN 218
Query: 208 HLVTVSRDKKLRVWDVR----AEKIVS--EGPAHSGAKNQRVVWLGDTDKVATTGFSRLS 261
L++ S D L WD+R A+++V+ +G +H+ KN D T G +
Sbjct: 219 FLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRDNYITAG---SA 275
Query: 262 DRQIGVWDA 270
DR + VW+A
Sbjct: 276 DRFVYVWNA 284
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 67.8 bits (164), Expect = 5e-11
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 24/166 (14%)
Query: 105 NDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNP-KDLKPVRMLSGHSRKVGHLLFHPL 163
++ ++ + SDD + +W NP K KP+ ++GH + V H+ F P
Sbjct: 370 SEEMMVTASDDYTMFLW----------------NPLKSTKPIARMTGHQKLVNHVAFSPD 413
Query: 164 AENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWD 222
I+ S+S D ++K+WD + T + H V +++S D + LV+ S+D L+VWD
Sbjct: 414 GRYIV-SASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWD 472
Query: 223 VRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVW 268
VR K+ + P H + V W D +V + G D+ + +W
Sbjct: 473 VRTRKLSVDLPGHKD-EVYTVDWSVDGKRVCSGG----KDKMVRLW 513
Score = 55.1 bits (131), Expect = 4e-07
Identities = 43/151 (28%), Positives = 73/151 (47%), Gaps = 26/151 (17%)
Query: 85 QVPL--FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDL 142
Q P+ +GH VL +SP + ++A+GS D I +W+ L +
Sbjct: 176 QTPMHTLKGHYNWVLCVSWSP-DGEVIATGSMDNTIRLWDPKSGQCLGD----------- 223
Query: 143 KPVRMLSGHSRKVGHLLFHPL------AENILASSSLDYTVKIWDISQEEVKFTLK-HPD 195
L GHS+ + L + P+ ++ LASSS D T+KIWD ++T+ H +
Sbjct: 224 ----ALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTN 279
Query: 196 MVTSMSFSYDGKHLVTVSRDKKLRVWDVRAE 226
V+ + + G L + S D+ +RVWD+ ++
Sbjct: 280 SVSCVKWGGQGL-LYSGSHDRTVRVWDINSQ 309
Score = 50.8 bits (120), Expect = 7e-06
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 164 AENILASSSLDYTVKIWDI--SQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVW 221
+E ++ ++S DYT+ +W+ S + + H +V ++FS DG+++V+ S D +++W
Sbjct: 370 SEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLW 429
Query: 222 DVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
D R K +S H + Q V W D + + D + VWD
Sbjct: 430 DGRDGKFISTFRGHVASVYQ-VAWSSDCRLLVSCS----KDTTLKVWD 472
>YBR198c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 798
Score = 67.4 bits (163), Expect = 7e-11
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
++GH V D FSP H A+ S D +W Y P+R+
Sbjct: 563 YKGHNHPVWDVSFSPLG-HYFATASHDQTARLWSCDHIY----------------PLRIF 605
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ-EEVKFTLKHPDMVTSMSFSYDGK 207
+GH V + FHP + SS D T ++WD+S + V+ L H V S++ DG+
Sbjct: 606 AGHLNDVDCVSFHPNGCYVFTGSS-DKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGR 664
Query: 208 HLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGV 267
L T S D + VWD+ K + + H + ++ K S +D + V
Sbjct: 665 WLSTGSEDGIINVWDIGTGKRLKQMRGH----GKNAIYSLSYSKEGNVLISGGADHTVRV 720
Query: 268 WD 269
WD
Sbjct: 721 WD 722
Score = 54.3 bits (129), Expect = 6e-07
Identities = 33/101 (32%), Positives = 51/101 (49%), Gaps = 17/101 (16%)
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
D V LF GHTA V+ P + +++GS+DG I +W+I G K LK
Sbjct: 642 DSVRLFLGHTAPVISIAVCP-DGRWLSTGSEDGIINVWDI-------------GTGKRLK 687
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ 184
+R GH + + L + N+L S D+TV++WD+ +
Sbjct: 688 QMR---GHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKK 725
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 67.4 bits (163), Expect = 7e-11
Identities = 47/190 (24%), Positives = 79/190 (40%), Gaps = 24/190 (12%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
++GHT V D F PF H A+ S D +W Y P+R+
Sbjct: 417 YKGHTGPVWDVAFGPFG-HYFATASHDQTAQLWSCDHIY----------------PLRVF 459
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ-EEVKFTLKHPDMVTSMSFSYDGK 207
+GH V + FHP + +L SS D T ++WD+ + V+ H VT+++ + DG
Sbjct: 460 AGHLSDVDCVTFHPNSAYVLTGSS-DKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGH 518
Query: 208 HLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGV 267
+ + + + +WD+ + + H G ++ + +T S SD +
Sbjct: 519 TMASADSEGLIHLWDIGTGRRIKTMRGHRGN-----IYSLSFSRESTVLVSGGSDCTVRA 573
Query: 268 WDAFNLEKGN 277
WD F N
Sbjct: 574 WDVFKTNYNN 583
>ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 556
Score = 67.0 bits (162), Expect = 9e-11
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 24/196 (12%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
+++ H V D +P ND+ ASG+ D + +W + KP R+
Sbjct: 359 VYKAHAFPVWCVDVAP-NDYFFASGAGDRQAIVWSVMTS----------------KPERL 401
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEV-KFTLKHPDMVTSMSFSYDG 206
+ V + FHP + + SS D+ V++ DIS V + H D VT M S+ G
Sbjct: 402 IISSLSDVTAVKFHPNSSYLFTGSS-DHRVRMHDISTASVVRIFCGHTDTVTCMDVSHCG 460
Query: 207 KHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIG 266
K L + S+D+ + +WD+++ K++ + H V + +A+ G +D +
Sbjct: 461 KFLASGSKDRTVLLWDIQSSKLLGKYVGHENTVFS-VSFCFYGSVLASCG----ADNSVR 515
Query: 267 VWDAFNLEKGNLGGFY 282
+WD + + G LG +Y
Sbjct: 516 LWDRTDHKGGCLGTYY 531
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 66.6 bits (161), Expect = 1e-10
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 32/184 (17%)
Query: 101 FSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLF 160
FSP + +A+G++D I IW+I ++ K V +L GH + + L +
Sbjct: 451 FSP-DGKFLATGAEDRLIRIWDI----------------ENRKIVMILQGHEQDIYSLDY 493
Query: 161 HPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFS-YDGKHLVTVSRDKKLR 219
P + +++ S D TV+IWD+ + TL D VT+++ S DGK++ S D+ +R
Sbjct: 494 FPSGDKLVSGSG-DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVR 552
Query: 220 VWDVR----AEKIVSEGPAHSGAKNQ--RVVWLGDTDKVATTGFSRLSDRQIGVWDAFNL 273
VWD E++ SE + +G K+ VV+ D V + DR + +W NL
Sbjct: 553 VWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL----DRSVKLW---NL 605
Query: 274 EKGN 277
+ N
Sbjct: 606 QNAN 609
>At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 66.6 bits (161), Expect = 1e-10
Identities = 49/162 (30%), Positives = 83/162 (50%), Gaps = 24/162 (14%)
Query: 109 VASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK-PVRMLSGHSRKVGHLLFHPLAENI 167
+ SGSDD + +WE P K P + L+GH + V H+ F P + I
Sbjct: 332 LVSGSDDFTMFLWE----------------PSVSKQPKKRLTGHQQLVNHVYFSPDGKWI 375
Query: 168 LASSSLDYTVKIWD-ISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAE 226
AS+S D +V++W+ I+ + V H V +S+S D + L++ S+D L++W++R +
Sbjct: 376 -ASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTK 434
Query: 227 KIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVW 268
K+ + P H+ + V W D +KV + G DR + +W
Sbjct: 435 KLKQDLPGHAD-EVFAVDWSPDGEKVVSGG----KDRVLKLW 471
Score = 51.6 bits (122), Expect = 4e-06
Identities = 33/93 (35%), Positives = 55/93 (58%), Gaps = 4/93 (4%)
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDG 206
++GH+ V + F P + LAS S D TV++WD+ E FT K H + V ++++S DG
Sbjct: 105 IAGHAEAVLCVSFSPDGKQ-LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDG 163
Query: 207 KHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAK 239
KHLV+ S+ ++ W+ + ++ EG +G K
Sbjct: 164 KHLVSGSKSGEICCWNPKKGEL--EGSPLTGHK 194
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 65.9 bits (159), Expect = 2e-10
Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 19/147 (12%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GHT V FSP N +AS S D I IW D K + +SG
Sbjct: 43 GHTKAVSSVKFSP-NGEWLASSSADKLIKIW----------------GAYDGKFEKTISG 85
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
H + + + N+L S+S D T+KIWD+S + TLK H + V +F+ +
Sbjct: 86 HKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 210 VTVSRDKKLRVWDVRAEKIVSEGPAHS 236
V+ S D+ +R+WDV+ K + PAHS
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHS 171
Score = 60.1 bits (144), Expect = 1e-08
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 19/133 (14%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH + D +S + +++ S SDD + IW++ K ++ L G
Sbjct: 85 GHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSG----------------KCLKTLKG 127
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
HS V F+P + N++ S S D +V+IWD+ + TL H D V+++ F+ DG +
Sbjct: 128 HSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI 186
Query: 210 VTVSRDKKLRVWD 222
V+ S D R+WD
Sbjct: 187 VSSSYDGLCRIWD 199
Score = 57.4 bits (137), Expect = 7e-08
Identities = 55/222 (24%), Positives = 98/222 (43%), Gaps = 43/222 (19%)
Query: 27 YGQPAKKELQYENLRITSNAW--DSNLI--KCNGKYISVNWNSSGGGAFAVIPVKEVGKI 82
Y +K + L I+ AW DSNL+ + K + + W+ S G +
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI-WDVSSGKCLKTL-------- 125
Query: 83 PDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDL 142
+GH+ V +F+P +++ SGS D + IW++ K
Sbjct: 126 -------KGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV----------------KTG 161
Query: 143 KPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDM--VTSM 200
K ++ L HS V + F+ +++ SSS D +IWD + + TL D V+ +
Sbjct: 162 KCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 201 SFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQR 242
FS +GK+++ + D L++WD K + ++G KN++
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLK---TYTGHKNEK 259
Score = 53.5 bits (127), Expect = 1e-06
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDG 206
L+GH++ V + F P E LASSS D +KIW + + T+ H ++ +++S D
Sbjct: 41 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 207 KHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIG 266
LV+ S DK L++WDV + K + HS V+ + + + S D +
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHS-----NYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 267 VWD 269
+WD
Sbjct: 155 IWD 157
>YFL009w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 779
Score = 65.5 bits (158), Expect = 3e-10
Identities = 60/235 (25%), Positives = 104/235 (43%), Gaps = 35/235 (14%)
Query: 88 LFRGHTAQVLDTDFSPF-NDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNP-----KD 141
+F+GH + V D + N + +GS D + +W++P++ + ++ +E P +
Sbjct: 458 VFKGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE 517
Query: 142 LKP--VRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVT 198
P V +L GH V + H NI+ S S D T+ +WD++Q + + L H D +
Sbjct: 518 ENPYFVGVLRGHMASVRTVSGHG---NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIY 574
Query: 199 SMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEG----PAHSGAKNQRVVWLGDT--DKV 252
S + ++ K ++ S D +R+WD+ E I + G +S + +++ T
Sbjct: 575 STIYDHERKRCISASMDTTIRIWDL--ENIWNNGECSYATNSASPCAKILGAMYTLQGHT 632
Query: 253 ATTGFSRLSDR---------QIGVWDA------FNLEKGNLGGFYNVDQSSGILM 292
A G RLSD+ I WDA F+ NL S IL+
Sbjct: 633 ALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILV 687
>7302600 [R] KOG4155 FOG: WD40 repeat
Length = 1240
Score = 65.5 bits (158), Expect = 3e-10
Identities = 67/259 (25%), Positives = 110/259 (41%), Gaps = 42/259 (16%)
Query: 83 PDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDE-EGNPKD 141
P+ GHTA V F+P N +A+GS+D + IW + L E + +G+
Sbjct: 774 PEYQCTLEGHTAGVSCLKFAP-NGEFLATGSEDRLVHIWNL----ALGEICNSFKGHTAP 828
Query: 142 LKPVRMLSGHSRKVGH------LLFHPLAENIL-------------------ASSSLDYT 176
+ V +L R + L++ + N+L S++ D T
Sbjct: 829 VVKVVVLMDSLRVISTDRDSMLLVWMAHSGNLLQTIQGPYKSLSVTNNMRFAVSTNGDNT 888
Query: 177 VKIWDISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHS 236
+KIW ++QE+ K+++ H D +T S D H+++ SRD L+VW K+ HS
Sbjct: 889 LKIWSLTQEDEKYSVSHSDEITCFEISADSVHIISGSRDMSLKVWQATGGKLSQVLVGHS 948
Query: 237 GAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLEK-----GNLGGFYNVDQSS--G 289
A V + T+K T S D + +WD E+ G+LG V S+
Sbjct: 949 DAVT--CVAVSVTNK--TQVLSGSKDMNLILWDLLTGEEVHTLAGHLGPVIGVKVSADGS 1004
Query: 290 ILMPFYDDSNRILYVAGKG 308
+ DD I++ +G
Sbjct: 1005 TAVSGSDDKTLIVWETKRG 1023
>Hs4885105 [BL] KOG1009 Chromatin assembly complex 1 subunit B/CAC2 (contains
WD40 repeats)
Length = 559
Score = 65.1 bits (157), Expect = 4e-10
Identities = 50/179 (27%), Positives = 93/179 (51%), Gaps = 11/179 (6%)
Query: 92 HTAQVLDTDFSPFNDHIVASGSDDGKIGIWEI-----PEDYGLHEYVDEEGNPKDLKPVR 146
HT V FSP + I+ASG DD I +W++ PE + + + N ++ V+
Sbjct: 65 HTKAVNVVRFSPTGE-ILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWTVVK 123
Query: 147 MLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ-EEVKFTLKHPDMVTSMSFSYD 205
L GH V + + N++AS+S+D T IWD+S+ +++ +H V +++
Sbjct: 124 TLRGHLEDVYDICW-ATDGNLMASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPL 182
Query: 206 GKHLVTVSRDKKLRVWDVRAEKI---VSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS 261
G+++ T+S D+ LRV+ ++ +++ VS+ + GA+ + + D + F RLS
Sbjct: 183 GQYVATLSCDRVLRVYSIQKKRVAFNVSKMLSGIGAEGEARSYRMFHDDSMKSFFRRLS 241
>7302720 [R] KOG0266 WD40 repeat-containing protein
Length = 307
Score = 65.1 bits (157), Expect = 4e-10
Identities = 45/133 (33%), Positives = 67/133 (49%), Gaps = 20/133 (15%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH V D +S ++AS SDD + +W+ + V++L G
Sbjct: 96 GHGDGVNDVAWSAAG--LIASCSDDMTVRLWDA----------------RSKLCVKVLEG 137
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDI-SQEEVKFTLKHPDMVTSMSFSYDGKHL 209
HSR F+P A N+LAS+S D TV++WD+ + + +K H D +TS+ F DG
Sbjct: 138 HSRYSFSCCFNPQA-NLLASTSFDETVRLWDVRTGKTLKIVHAHQDPITSVDFHRDGNIF 196
Query: 210 VTVSRDKKLRVWD 222
VT S D +R+WD
Sbjct: 197 VTSSYDGLVRLWD 209
>7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 65.1 bits (157), Expect = 4e-10
Identities = 42/146 (28%), Positives = 71/146 (47%), Gaps = 16/146 (10%)
Query: 81 KIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPK 140
++ D +F GHTA V D + ++ + S +DD K+ IW+ N
Sbjct: 219 RVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR-------------NNN 265
Query: 141 DLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL--KHPDMVT 198
KP + H+ +V L F+P +E ILA+ S D TV +WD+ ++K H D +
Sbjct: 266 TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIF 325
Query: 199 SMSFS-YDGKHLVTVSRDKKLRVWDV 223
+ +S ++ L + D++L VWD+
Sbjct: 326 QVQWSPHNETILASSGTDRRLHVWDL 351
>SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 509
Score = 64.7 bits (156), Expect = 5e-10
Identities = 64/210 (30%), Positives = 90/210 (42%), Gaps = 25/210 (11%)
Query: 52 IKCNGKYISVNWNSSGGGAFAVIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVAS 111
++C W SG G V K + V + + H +V D FSP ND +
Sbjct: 126 VRCAEWSTDGRWLISGDGGGMV---KYFEPNLNNVKIVQAHEMEVRDVAFSP-NDSKFVT 181
Query: 112 GSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASS 171
SDDG + +W + ++LK L+GH V + +HP ++ +LAS
Sbjct: 182 ASDDGSLKVWNF------------HMSTEELK----LTGHGWDVKTVDWHP-SKGLLASG 224
Query: 172 SLDYTVKIWDISQEEVKFTLK-HPDMVTSMSF--SYDGKHLVTVSRDKKLRVWDVRAEKI 228
S D VK WD TL H + + SF ++ +L TVSRD RV+D+RA K
Sbjct: 225 SKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGSNYLATVSRDSTCRVFDLRAMKD 284
Query: 229 VSEGPAHSGAKNQRVVWLGDTDKVATTGFS 258
V H N V W + TTG S
Sbjct: 285 VRVLRGHEKDVN-CVTWHPLYPNLLTTGGS 313
>Hs7706657 [S] KOG0282 mRNA splicing factor
Length = 579
Score = 64.7 bits (156), Expect = 5e-10
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 85 QVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKP 144
Q+ ++ GHT V P + H++ S S D KI +WE+ YG + +
Sbjct: 280 QIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEV---YG------------ERRC 324
Query: 145 VRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEV--KFTLKHPDMVTSMSF 202
+R GHS+ V + F+ L S++ D +K+WD + +FT + +
Sbjct: 325 LRTFIGHSKAVRDICFNTAGTQFL-SAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 383
Query: 203 SYDGKHL-VTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS 261
D ++L V DKK+ WD+R+ +IV E H GA N +V++ + + +T
Sbjct: 384 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVN-TIVFVDENRRFVSTS----D 438
Query: 262 DRQIGVWD 269
D+ + VW+
Sbjct: 439 DKSLRVWE 446
Score = 58.2 bits (139), Expect = 4e-08
Identities = 45/199 (22%), Positives = 92/199 (45%), Gaps = 12/199 (6%)
Query: 123 IPEDYG--LHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIW 180
IP+D G L + E K + + SGH++ V + PL+ ++L S S+D +K+W
Sbjct: 257 IPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLW 316
Query: 181 DISQEE--VKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGA 238
++ E ++ + H V + F+ G ++ + D+ L++WD + +S +
Sbjct: 317 EVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISR---FTNR 373
Query: 239 KNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDS 298
K V + + +SD++I WD + G + Y+ + + F D++
Sbjct: 374 KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWD---IRSGEIVQEYDRHLGAVNTIVFVDEN 430
Query: 299 NRILYVAGKGDGNIRYFEF 317
R +V+ D ++R +E+
Sbjct: 431 RR--FVSTSDDKSLRVWEW 447
>7303687 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 704
Score = 64.7 bits (156), Expect = 5e-10
Identities = 43/136 (31%), Positives = 64/136 (46%), Gaps = 19/136 (13%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
+F GH + V F P N + VA+GS D + +W+ + VR+
Sbjct: 529 VFVGHLSDVDCVQFHP-NSNYVATGSSDRTVRLWDNMTG----------------QSVRL 571
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSYDG 206
++GH V L F LAS S+D+ + IWD+S + TL +H VT+++FS DG
Sbjct: 572 MTGHKGSVSSLAFSACGR-YLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDG 630
Query: 207 KHLVTVSRDKKLRVWD 222
L D L +WD
Sbjct: 631 TVLAAAGLDNNLTLWD 646
Score = 61.2 bits (147), Expect = 5e-09
Identities = 49/185 (26%), Positives = 82/185 (43%), Gaps = 24/185 (12%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
V +RGH V D F+P + V S S D +W + L +V
Sbjct: 485 VVTYRGHVYPVWDVRFAPHGYYFV-SCSYDKTARLWATDSNQALRVFV------------ 531
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWD-ISQEEVKFTLKHPDMVTSMSFSY 204
GH V + FHP + N +A+ S D TV++WD ++ + V+ H V+S++FS
Sbjct: 532 ----GHLSDVDCVQFHPNS-NYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSA 586
Query: 205 DGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQ 264
G++L + S D + +WD+ +V+ H+ + + D +A G D
Sbjct: 587 CGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVT-TITFSRDGTVLAAAGL----DNN 641
Query: 265 IGVWD 269
+ +WD
Sbjct: 642 LTLWD 646
>YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 465
Score = 64.3 bits (155), Expect = 6e-10
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 19/188 (10%)
Query: 92 HTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGH 151
H ++ D+ P +++ + S ++DG I ++ Y +EEG L+ + L GH
Sbjct: 217 HVGKIGAIDWHPDSNNQMISCAEDGLIKNFQ---------YSNEEGG---LRLLGDLVGH 264
Query: 152 SRKVGHLLFHPLAENILASSSLDYTVKIWDIS-QEEVKFTLKHPDMVTSMSFSYDGKHLV 210
R++ + +HP + + S+S D T ++WD S +E+ H V S+SF DG +
Sbjct: 265 ERRISDVKYHPSGK-FIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVC 323
Query: 211 TVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDA 270
+ D +WD+R+ V HS V W + +VAT G D I VWD
Sbjct: 324 SGGMDSLSMLWDIRSGSKVMTLAGHS-KPIYTVAWSPNGYQVATGG----GDGIINVWDI 378
Query: 271 FNLEKGNL 278
++G L
Sbjct: 379 RKRDEGQL 386
>Hs21071065 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 745
Score = 64.3 bits (155), Expect = 6e-10
Identities = 47/136 (34%), Positives = 66/136 (47%), Gaps = 19/136 (13%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
+F GH A V T F P N + VA+GS D + +W++ GN VR+
Sbjct: 567 IFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLN-----------GNC-----VRI 609
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDG 206
+GH + L F P LA+ + D V +WDI + LK H D V S+ FS DG
Sbjct: 610 FTGHKGPIHSLTFSPNGR-FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDG 668
Query: 207 KHLVTVSRDKKLRVWD 222
+ L + S D +R+WD
Sbjct: 669 EILASGSMDNTVRLWD 684
Score = 58.5 bits (140), Expect = 3e-08
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 23/137 (16%)
Query: 143 KPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEE-VKFTLKHPDMVTSMS 201
+P+R+ +GH V FHP + N +A+ S D TV++WD+ V+ H + S++
Sbjct: 563 QPLRIFAGHLADVNCTRFHPNS-NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLT 621
Query: 202 FSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSR-- 259
FS +G+ L T + D ++ +WD+ +V E H TD V + FSR
Sbjct: 622 FSPNGRFLATGATDGRVLLWDIGHGLMVGELKGH-------------TDTVCSLRFSRDG 668
Query: 260 ------LSDRQIGVWDA 270
D + +WDA
Sbjct: 669 EILASGSMDNTVRLWDA 685
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 64.3 bits (155), Expect = 6e-10
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 31/200 (15%)
Query: 47 WDSNLIKCNGKYISVNWNSSGGGAFAVIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFND 106
W CN KY+ N ++V E GK + G L +SP
Sbjct: 131 WTVQFSPCN-KYVISGLNDGKISMYSV----ETGKAEQTLDAQNGK--YTLSIAYSPDGK 183
Query: 107 HIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAEN 166
+I ASG+ DG I I+++ K V+ L GH+ V L F P ++
Sbjct: 184 YI-ASGAIDGIITIFDVAAG----------------KVVQTLEGHAMPVRSLCFSPNSQL 226
Query: 167 ILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRA 225
+L +S D +K++D++ +V TL H V ++FS DGKH + S D +++WD
Sbjct: 227 LLTASD-DGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSE 285
Query: 226 EKIVSEGPAHSGAKNQRVVW 245
K + H+ A++ VW
Sbjct: 286 RKCL-----HTFAEHTDQVW 300
Score = 55.1 bits (131), Expect = 4e-07
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 55 NGKY-ISVNWNSSG-----GGAFAVIPVKEV--GKIPDQVPLFRGHTAQVLDTDFSPFND 106
NGKY +S+ ++ G G +I + +V GK+ V GH V FSP N
Sbjct: 169 NGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKV---VQTLEGHAMPVRSLCFSP-NS 224
Query: 107 HIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAEN 166
++ + SDDG + ++++ H V V LSGH+ V + F ++
Sbjct: 225 QLLLTASDDGHMKLYDVT-----HSDV-----------VGTLSGHASWVLCVAFSEDGKH 268
Query: 167 ILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSYDGKHLVTVSRDKKLRVW 221
ASSS D +VKIWD S+ + T +H D V + +S + + S DK L ++
Sbjct: 269 F-ASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
>ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 384
Score = 63.9 bits (154), Expect = 8e-10
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 68 GGAFAVIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDY 127
GG V V + + R H V D FS F+ +++S D G + +W+ +
Sbjct: 180 GGEVCVFDVSQESSSISPTVVLRRHETAVNDCAFSFFDKKLLSSAGDGGMVVLWDTRSED 239
Query: 128 GLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWD--ISQE 185
+H EE + D+ VR F PL N++A+SS D +VK+WD +
Sbjct: 240 CIHAI--EEAHTSDILSVR-------------FSPLDGNVIATSSCDGSVKVWDRRSLSQ 284
Query: 186 EVKFTLKHPDMVTSMSFS-YDGKHLVTVSRDKKLRVWDVR------AEKIVSEGP 233
+ L H V S+ +S ++ K L + S D+++ VWD+ E+ +EGP
Sbjct: 285 PLHILLGHSKDVVSVEWSPHNDKVLASGSTDRRVIVWDLGQAGAEVPEEYKAEGP 339
Score = 55.5 bits (132), Expect = 3e-07
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 31/148 (20%)
Query: 92 HTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGH 151
HT+ +L FSP + +++A+ S DG + +W+ +P+ +L GH
Sbjct: 248 HTSDILSVRFSPLDGNVIATSSCDGSVKVWD---------------RRSLSQPLHILLGH 292
Query: 152 SRKVGHLLFHPLAENILASSSLDYTVKIWDISQ--------------EEVKFTL-KHPDM 196
S+ V + + P + +LAS S D V +WD+ Q E+KF H
Sbjct: 293 SKDVVSVEWSPHNDKVLASGSTDRRVIVWDLGQAGAEVPEEYKAEGPPEMKFLHGGHTST 352
Query: 197 VTSMSFS-YDGKHLVTVSRDKKLRVWDV 223
V +S++ + + +VS D L++W +
Sbjct: 353 VCDISWNPAEPFEIASVSEDNILQIWQM 380
Score = 53.1 bits (126), Expect = 1e-06
Identities = 47/196 (23%), Positives = 83/196 (41%), Gaps = 26/196 (13%)
Query: 81 KIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPK 140
KIP + RGH+A ++ N +A + G++ ++++ ++
Sbjct: 146 KIPRPDMVLRGHSAGGFGLSWNHLNPGELAGCGEGGEVCVFDVSQE------------SS 193
Query: 141 DLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK--HPDMVT 198
+ P +L H V F + +L+S+ V +WD E+ ++ H +
Sbjct: 194 SISPTVVLRRHETAVNDCAFSFFDKKLLSSAGDGGMVVLWDTRSEDCIHAIEEAHTSDIL 253
Query: 199 SMSFS-YDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQR----VVWLGDTDKVA 253
S+ FS DG + T S D ++VWD R+ P H + + V W DKV
Sbjct: 254 SVRFSPLDGNVIATSSCDGSVKVWDRRS----LSQPLHILLGHSKDVVSVEWSPHNDKVL 309
Query: 254 TTGFSRLSDRQIGVWD 269
+G +DR++ VWD
Sbjct: 310 ASG---STDRRVIVWD 322
Score = 52.4 bits (124), Expect = 2e-06
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 16/103 (15%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIW-------EIPEDYGLHEYVDEEGNPKDLK 143
GH+ V+ ++SP ND ++ASGS D ++ +W E+PE+Y + P ++K
Sbjct: 291 GHSKDVVSVEWSPHNDKVLASGSTDRRVIVWDLGQAGAEVPEEY-------KAEGPPEMK 343
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEE 186
+ GH+ V + ++P +AS S D ++IW + Q E
Sbjct: 344 FLH--GGHTSTVCDISWNPAEPFEIASVSEDNILQIWQMPQPE 384
>SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 642
Score = 62.8 bits (151), Expect = 2e-09
Identities = 48/185 (25%), Positives = 81/185 (42%), Gaps = 30/185 (16%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
+ GH A + D FSPF + A+ S D +W++ + P+R+
Sbjct: 441 YAGHNAPIWDVQFSPFG-YYFATASHDQTARLWDV----------------EHAAPLRVF 483
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI-SQEEVKFTLKHPDMVTSMSFSYDGK 207
GH V + FHP A LA+ S D+T ++WD+ + V+ H V+++ S DG
Sbjct: 484 VGHQNDVDCVSFHPNAA-YLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGL 542
Query: 208 HLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVW---LGDTDKVATTGFSRLSDRQ 264
L + ++VWD+R S S K+ +V+ +K+ +G +D
Sbjct: 543 SLASADESGIIKVWDLR-----SSNQHVSFVKHSSIVYSLSFSYDNKILVSGG---ADTD 594
Query: 265 IGVWD 269
+ WD
Sbjct: 595 VNFWD 599
Score = 54.7 bits (130), Expect = 5e-07
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 31/228 (13%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKP-VRMLS 149
GHT V SP + I+ S S+DG +W KD K + +
Sbjct: 401 GHTRPVFGVSISPQKEFIL-SCSEDGFTRLWS-----------------KDTKSTIVKYA 442
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEE-VKFTLKHPDMVTSMSFSYDGKH 208
GH+ + + F P A++S D T ++WD+ ++ + H + V +SF + +
Sbjct: 443 GHNAPIWDVQFSPFGY-YFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAY 501
Query: 209 LVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVW 268
L T S D R+WDVR V AH + ++ G S S + G+
Sbjct: 502 LATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALC--------MSADGLSLASADESGII 553
Query: 269 DAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFE 316
++L N + V SS + + N+IL V+G D ++ +++
Sbjct: 554 KVWDLRSSNQHVSF-VKHSSIVYSLSFSYDNKIL-VSGGADTDVNFWD 599
>SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 462
Score = 62.8 bits (151), Expect = 2e-09
Identities = 54/240 (22%), Positives = 93/240 (38%), Gaps = 73/240 (30%)
Query: 85 QVPLFRGHTAQVLDTDFSPF--------NDHIVASGSDDGKIGIWEIPEDYGLHEYVDEE 136
+V LFRGHT +V D+ P +A+G+ D + +W+ +
Sbjct: 206 EVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQS---------- 255
Query: 137 GNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI-------------- 182
P+ L GH +VG + FHP + L S+S D T ++WD+
Sbjct: 256 ------TPLLRLEGHLARVGRVAFHPSGD-YLVSASFDTTWRLWDVHTGVELLMQEGHSE 308
Query: 183 -----------------------------SQEEVKFTLKHPDMVTSMSFSYDGKHLVTVS 213
S + + +H + +M++S +G L T S
Sbjct: 309 GIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSS 368
Query: 214 RDKKLRVWDVRAEKIVSEGPAHSG-AKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFN 272
D +++WD+R + PAHS + R + G +AT+G+ D + +W+ N
Sbjct: 369 ADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGY----DGCVKLWNPLN 424
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 62.8 bits (151), Expect = 2e-09
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 24/188 (12%)
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
++V RGH+A+++ F+ D I+ +GS D + +W+ D G +
Sbjct: 127 EEVYTLRGHSAEIISLSFNTSGDRII-TGSFDHTVVVWDA--DTG--------------R 169
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSF 202
V +L GH ++ F+ IL + S+D T K+WD + + TL H D + F
Sbjct: 170 KVNILIGHCAEISSASFNWDCSLIL-TGSMDKTCKLWDATNGKCVATLTGHDDEILDSCF 228
Query: 203 SYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSD 262
Y GK + T S D R++ K +++ H G ++ + TG SD
Sbjct: 229 DYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISK--ISFNPQGNHLLTG---SSD 283
Query: 263 RQIGVWDA 270
+ +WDA
Sbjct: 284 KTARIWDA 291
Score = 57.8 bits (138), Expect = 6e-08
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 25/191 (13%)
Query: 84 DQVPLFRGHTAQVLDTDFS-PFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDL 142
+++ GH V F+ P+ D I A+GS D +W + H +
Sbjct: 42 EELNTLEGHRNVVYAIAFNNPYGDKI-ATGSFDKTCKLWSVETGKCYHTF---------- 90
Query: 143 KPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMS 201
GH+ ++ L F+P + ++A+ S+D T K+WDI E +TL+ H + S+S
Sbjct: 91 ------RGHTAEIVCLSFNPQS-TLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLS 143
Query: 202 FSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS 261
F+ G ++T S D + VWD + V+ H A+ + D + T
Sbjct: 144 FNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHC-AEISSASFNWDCSLILTGSM---- 198
Query: 262 DRQIGVWDAFN 272
D+ +WDA N
Sbjct: 199 DKTCKLWDATN 209
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 62.8 bits (151), Expect = 2e-09
Identities = 43/142 (30%), Positives = 71/142 (49%), Gaps = 19/142 (13%)
Query: 82 IPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKD 141
I + V F GH + D FS + + S SDD + +W++ E G+
Sbjct: 60 IAEPVQEFTGHENGISDVAFSS-DARFIVSASDDKTLKLWDV-----------ETGSL-- 105
Query: 142 LKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEE-VKFTLKHPDMVTSM 200
++ L GH+ + F+P + N++ S S D TV+IWD++ + +K H D VT++
Sbjct: 106 ---IKTLIGHTNYAFCVNFNPQS-NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAV 161
Query: 201 SFSYDGKHLVTVSRDKKLRVWD 222
F+ DG +V+ S D R+WD
Sbjct: 162 DFNRDGSLIVSSSYDGLCRIWD 183
Score = 53.5 bits (127), Expect = 1e-06
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 113 SDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSS 172
S DG++ + D + Y N +PV+ +GH + + F A I+++S
Sbjct: 33 SSDGRL-LASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASD 91
Query: 173 LDYTVKIWDISQEE-VKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSE 231
D T+K+WD+ +K + H + ++F+ +V+ S D+ +R+WDV K +
Sbjct: 92 -DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKV 150
Query: 232 GPAHS 236
PAHS
Sbjct: 151 LPAHS 155
>SPBC6B1.10 [S] KOG0282 mRNA splicing factor
Length = 558
Score = 62.4 bits (150), Expect = 2e-09
Identities = 51/214 (23%), Positives = 86/214 (39%), Gaps = 31/214 (14%)
Query: 59 ISVNWNSSGGGAFAVIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKI 118
+ +N + G IP K + ++GHT + F P + H++ SGS D +I
Sbjct: 239 VGINLSEEPGEQTCYIPKKHIFT-------WKGHTKGISCLRFFPISGHLLLSGSMDNQI 291
Query: 119 GIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVK 178
IWE+ D L +R GH+R + L F + L S+S D T+K
Sbjct: 292 KIWEVYHDRSL---------------LRTFQGHARPIRDLSFSQDGRSFL-STSFDKTIK 335
Query: 179 IWDISQEEVKFTLKHPDMVTSMSFSYD---GKHLVTVSRDKKLRVWDVRAEKIVSEGPAH 235
+WD + + + F D + + DK++ +D+R+ IV H
Sbjct: 336 LWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIRSPDIVQAYDHH 395
Query: 236 SGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
G N + +L + + TT D + W+
Sbjct: 396 LGGINS-ITFLENGKRFVTTS----DDSSMRFWE 424
>SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein
Length = 314
Score = 62.4 bits (150), Expect = 2e-09
Identities = 62/256 (24%), Positives = 109/256 (42%), Gaps = 38/256 (14%)
Query: 82 IPDQVPL---FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPED---YGLHEYVDE 135
+P+Q+ L GH+ V +P N I+ SGS D I +W + D YG+ +
Sbjct: 1 MPEQLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQ---- 56
Query: 136 EGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFT-LKHP 194
R L+GHS V + S+S D T+++WD+ + E + H
Sbjct: 57 ----------RRLTGHSHFVSDCALS-FDSHYALSASWDKTIRLWDLEKGECTHQFVGHT 105
Query: 195 DMVTSMSFSYDGKHLVTVSRDKKLRVWDV--RAEKIVSEGPAHSGAKNQRVVWLGDTDKV 252
V S+S S D + +V+ SRDK +++W++ + +++G R D
Sbjct: 106 SDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTF 165
Query: 253 ATTGFSRLSDRQIGVWD--AFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDG 310
+ G+ D+ + VWD F+L + G +G + + L +G DG
Sbjct: 166 VSAGW----DKAVKVWDLETFSLRTSHYG-------HTGYVSAVTISPDGSLCASGGRDG 214
Query: 311 NIRYFEF-QNDELYEL 325
+ ++ ++ LY L
Sbjct: 215 TLMLWDLNESTHLYSL 230
>Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 808
Score = 62.4 bits (150), Expect = 2e-09
Identities = 41/137 (29%), Positives = 65/137 (46%), Gaps = 21/137 (15%)
Query: 92 HTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGH 151
HTA V F P + ++A+G DG + +W+I YG H + G
Sbjct: 108 HTAPVATMAFDPTST-LLATGGCDGAVRVWDIVRHYGTHHFRGSPG-------------- 152
Query: 152 SRKVGHLL-FHPLAENILA-SSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKH 208
V HL+ FHP +L SS+ D +++W + L H VTS++FS DG
Sbjct: 153 ---VVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHT 209
Query: 209 LVTVSRDKKLRVWDVRA 225
+++ RDK +WD+++
Sbjct: 210 MLSSGRDKICIIWDLQS 226
Score = 52.0 bits (123), Expect = 3e-06
Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 31/194 (15%)
Query: 83 PDQVPLF-------RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDE 135
PD P+ R H + +P ND ++A+GS D +W +P+
Sbjct: 462 PDNGPILLQAQTTQRCHDKDINSVAIAP-NDKLLATGSQDRTAKLWALPQ---------- 510
Query: 136 EGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HP 194
+ + + SGH R + + F P+ + +LA++S D T+K+W + T + H
Sbjct: 511 ------CQLLGVFSGHRRGLWCVQFSPM-DQVLATASADGTIKLWALQDFSCLKTFEGHD 563
Query: 195 DMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVAT 254
V ++F G L++ D +++W ++ + V AH + VW ++
Sbjct: 564 ASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAH-----EDKVWGLHCSRLDD 618
Query: 255 TGFSRLSDRQIGVW 268
+ SD ++ +W
Sbjct: 619 HALTGASDSRVILW 632
>ECU01g1290 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 983
Score = 62.4 bits (150), Expect = 2e-09
Identities = 66/297 (22%), Positives = 123/297 (41%), Gaps = 38/297 (12%)
Query: 77 KEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEE 136
KE+ K+ ++ T++V F P + ++ SG G I W+ + +HE+++ +
Sbjct: 4 KEIRKMMEK------ETSRVKSLSFHP-SKPVIISGHHSGSIRAWDYQMNVCIHEFLEHD 56
Query: 137 GNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPD 195
G+ V +LFHP + S D +++W S+ V LK H D
Sbjct: 57 GS----------------VRAVLFHPRGD-FFVSGGDDKIIRVWSYSERRVTNRLKGHDD 99
Query: 196 MVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATT 255
V S+ F +++ S D+ + VW++ K+++ H +LG+ V
Sbjct: 100 FVRSLDFHPTKPWILSASDDQTIMVWNMLTGKLLATARGHCHYV-MAARFLGEESIV--- 155
Query: 256 GFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDS-NRI-----LYVAGKGD 309
S D+ I VWD L++G+ D ++ +D N I ++V+G D
Sbjct: 156 --SGSLDQSIRVWDCKGLKEGSKKNSLLPDIVIKQIVDGHDRGINAIAVRGEVFVSGGDD 213
Query: 310 GNIRYFEFQNDELYELS-EYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVE 365
+I+ +E+ ++E Y P G ++ E+ + Y +VE
Sbjct: 214 RDIKCWEWSETSVWEKEVMYNHQGPVTGLLCDGNHVLSSGEDGLFSIYNMESRKSVE 270
>CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 417
Score = 62.4 bits (150), Expect = 2e-09
Identities = 40/139 (28%), Positives = 66/139 (46%), Gaps = 19/139 (13%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
+F+GH + V D + +D + S DD K+ IW++ + P
Sbjct: 217 VFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDV----------------RTSTPGHC 260
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL--KHPDMVTSMSFS-Y 204
+ HS +V L F+P +E ILA+ S D TV +WD+ +K H D + + +S +
Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPH 320
Query: 205 DGKHLVTVSRDKKLRVWDV 223
+ L + DK+L VWD+
Sbjct: 321 NETILASSGTDKRLHVWDL 339
Score = 53.1 bits (126), Expect = 1e-06
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 80 GKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNP 139
GK+ + + H +V + P +I+A+ S + I+ DY H V +
Sbjct: 109 GKVEPDIRI--NHEGEVNRARYMPQKSNIIATKSPHADVYIF----DYLKHSAVPRDNT- 161
Query: 140 KDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDIS-------QEEVKFTLK 192
P+ L GH+++ L ++P E ++ S+S D TV WDI+ + + K K
Sbjct: 162 --FNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFK 219
Query: 193 -HPDMVTSMSFS--YDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDT 249
H +V +++ +DG +V DKKL +WDVR AHS N + + +
Sbjct: 220 GHESVVEDVAWHVLHDGV-FGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVN-CLAFNPYS 277
Query: 250 DKVATTGFSRLSDRQIGVWDAFNL 273
+ + TG +D+ + +WD NL
Sbjct: 278 EFILATG---SADKTVALWDLRNL 298
>At4g32990 [R] KOG0645 WD40 repeat protein
Length = 243
Score = 62.4 bits (150), Expect = 2e-09
Identities = 31/87 (35%), Positives = 54/87 (61%), Gaps = 1/87 (1%)
Query: 142 LKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSM 200
L+ V+ L GH+ +V ++ ++P A+ ++AS S D TV+IW+ S +T K H V S+
Sbjct: 10 LEEVQKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKGHESEVKSV 69
Query: 201 SFSYDGKHLVTVSRDKKLRVWDVRAEK 227
S++ G L T RDK + +W+++ E+
Sbjct: 70 SWNASGSLLATCGRDKSVWIWEIQPEE 96
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 62.4 bits (150), Expect = 2e-09
Identities = 41/133 (30%), Positives = 66/133 (48%), Gaps = 19/133 (14%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH + D +S + ++ SGSDD + +WE+ K ++ L G
Sbjct: 112 GHKLGISDVAWSS-DSRLLVSGSDDKTLKVWELSTG----------------KSLKTLKG 154
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
HS V F+P + N++ S S D +V+IWD+ + TL H D V+++ F+ DG +
Sbjct: 155 HSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLI 213
Query: 210 VTVSRDKKLRVWD 222
V+ S D R+WD
Sbjct: 214 VSSSYDGLCRIWD 226
Score = 60.5 bits (145), Expect = 9e-09
Identities = 47/147 (31%), Positives = 68/147 (45%), Gaps = 19/147 (12%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GHT V FSP N +AS S D I IW D K + +SG
Sbjct: 70 GHTKAVSAVKFSP-NGEWLASSSADKLIKIW----------------GAYDGKFEKTISG 112
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
H + + + +L S S D T+K+W++S + TLK H + V +F+ +
Sbjct: 113 HKLGISDVAWSS-DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLI 171
Query: 210 VTVSRDKKLRVWDVRAEKIVSEGPAHS 236
V+ S D+ +R+WDVR K + PAHS
Sbjct: 172 VSGSFDESVRIWDVRTGKCLKTLPAHS 198
Score = 53.5 bits (127), Expect = 1e-06
Identities = 40/155 (25%), Positives = 75/155 (47%), Gaps = 23/155 (14%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
+GH+ V +F+P +++ SGS D + IW++ + K ++ L
Sbjct: 153 KGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV----------------RTGKCLKTLP 195
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDM--VTSMSFSYDGK 207
HS V + F+ +++ SSS D +IWD + + TL D V+ + FS +GK
Sbjct: 196 AHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 254
Query: 208 HLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQR 242
+++ + D L++WD K + ++G KN++
Sbjct: 255 YILAATLDNTLKLWDYSKGKCLK---TYTGHKNEK 286
>7300806 [S] KOG0282 mRNA splicing factor
Length = 576
Score = 62.0 bits (149), Expect = 3e-09
Identities = 46/182 (25%), Positives = 82/182 (44%), Gaps = 24/182 (13%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH + + P H++ SGS D ++ +WE+ YG + + +R SG
Sbjct: 283 GHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEV---YG------------ERRCIRTFSG 327
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEV--KFTLKHPDMVTSMSFSYDGKH 208
H + + + ++ N L S+S D +K+WD +V +FT + +H
Sbjct: 328 HRQAIKDIAWNNRGTNFL-SASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFHPDNSKQH 386
Query: 209 L-VTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGV 267
L V + DKK+ WD R+ IV E H G+ + + ++ D + TT D+ + +
Sbjct: 387 LFVAGTSDKKIICWDTRSGDIVQEYDRHLGSVS-TITFVDDNRRFVTTS----DDKSMRI 441
Query: 268 WD 269
W+
Sbjct: 442 WE 443
Score = 52.0 bits (123), Expect = 3e-06
Identities = 38/171 (22%), Positives = 79/171 (45%), Gaps = 10/171 (5%)
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEE--VKFTLKHPDMVTSMSFSYDG 206
SGH++ + + + P ++L S S+D VK+W++ E ++ H + ++++ G
Sbjct: 282 SGHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGERRCIRTFSGHRQAIKDIAWNNRG 341
Query: 207 KHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIG 266
+ ++ S D+ +++WD +VS + K V + + SD++I
Sbjct: 342 TNFLSASYDRYIKLWDAETGDVVSR---FTTRKMPFCVKFHPDNSKQHLFVAGTSDKKII 398
Query: 267 VWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEF 317
WD G++ Y+ S + F DD+ R +V D ++R +E+
Sbjct: 399 CWDT---RSGDIVQEYDRHLGSVSTITFVDDNRR--FVTTSDDKSMRIWEW 444
>SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 703
Score = 61.6 bits (148), Expect = 4e-09
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 29/189 (15%)
Query: 81 KIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPK 140
K P V GHT V S + D I+ SGS D I IW + L+
Sbjct: 495 KNPYFVHTLIGHTDSV--RTISGYGD-ILVSGSYDSSIRIWRVSTGECLYH--------- 542
Query: 141 DLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSM 200
L GHS ++ +L+ P NI S S+D ++++WD+S K+ L+ D ++
Sbjct: 543 -------LRGHSLRIYSVLYEP-ERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTL 594
Query: 201 SFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRL 260
+ + L++ S D +R+WD+ K + P++SG + ++ D K+ +
Sbjct: 595 LNVFQNR-LISGSADSTIRIWDLNTGKPLMVLPSNSGYISS---FVSDEHKIISG----- 645
Query: 261 SDRQIGVWD 269
+D + +WD
Sbjct: 646 NDGSVKLWD 654
>7302082 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 424
Score = 61.6 bits (148), Expect = 4e-09
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 28/180 (15%)
Query: 108 IVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKP---------VRMLSGHSRKVGHL 158
+VA+GS D I I ++ E + + P+D++P +R L H+ +V +L
Sbjct: 120 LVATGSVDASIKILDV-------ERMLAKSAPEDIEPGREQQGHPVIRTLYDHTDEVSYL 172
Query: 159 LFHPLAENILASSSLDYTVKIWDISQEEVK-----FTLKHPDMVTSMSFSYDGKHLVTVS 213
FHP E+ILAS+S D TVK++DI++ VK FT P V +SF G ++ +
Sbjct: 173 EFHP-KEHILASASRDGTVKLFDIAKPSVKKAHKVFTDCEP--VLCLSFHPTGDYVAIGT 229
Query: 214 RDKKLRVWDVRAEK-IVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFN 272
LRV+DV + VS P+ V T K+ TG D I +WD +
Sbjct: 230 EHNVLRVYDVATTQCFVSAIPSQQHKAGVTCVKYSPTGKLYATG---SYDGDIKIWDGIS 286
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 61.2 bits (147), Expect = 5e-09
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 18/137 (13%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
+ GH++ + D +S + H S SDD + IW+ Y + +++L
Sbjct: 81 YEGHSSGISDLAWSS-DSHYTCSASDDCTLRIWDARSPY---------------ECLKVL 124
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEE-VKFTLKHPDMVTSMSFSYDGK 207
GH+ V + F+P N++ S S D T++IW++ + V+ H ++S+ F+ DG
Sbjct: 125 RGHTNFVFCVNFNP-PSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGS 183
Query: 208 HLVTVSRDKKLRVWDVR 224
+V+ S D ++WD +
Sbjct: 184 LIVSASHDGSCKIWDAK 200
>At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 926
Score = 61.2 bits (147), Expect = 5e-09
Identities = 44/158 (27%), Positives = 73/158 (45%), Gaps = 21/158 (13%)
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
D+V +F H+ + P ++++S SDD I +W+ + +
Sbjct: 90 DKVKVFEAHSDYIRCVAVHPTLPYVLSS-SDDMLIKLWDWEKGWAC-------------- 134
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSF 202
++ GHS V + F+P N AS+SLD T+KIW++ + FTL H V + +
Sbjct: 135 -TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY 193
Query: 203 --SYDGKHLVTVSRDKKLRVWDVRAEKIVS--EGPAHS 236
D +L+T S D +VWD + + V EG H+
Sbjct: 194 FTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN 231
>At1g15440 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 900
Score = 61.2 bits (147), Expect = 5e-09
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Query: 95 QVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRK 154
Q + P D + A D +I +W + G KD+ LSGH
Sbjct: 476 QFVSLTADPSGDVVCAGTLDSFEIFVWS-----------KKTGQIKDI-----LSGHEAP 519
Query: 155 VGHLLFHPLAENILASSSLDYTVKIWDI-SQEEVKFTLKHPDMVTSMSFSYDGKHLVTVS 213
V L+F PL + +LASSS DYTV++WD+ + + T +H V +++F DGK L + +
Sbjct: 520 VHGLMFSPLTQ-LLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASST 578
Query: 214 RDKKLRVWD 222
D ++ WD
Sbjct: 579 LDGQINFWD 587
>7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 1326
Score = 61.2 bits (147), Expect = 5e-09
Identities = 52/174 (29%), Positives = 75/174 (42%), Gaps = 31/174 (17%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
+GHT +V F + V SGS D I +W++ E GN K L
Sbjct: 1152 QGHTNRVYSLQFDGLH---VVSGSLDTSIRVWDV-----------ETGNCK-----HTLM 1192
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL----KHPDMVTSMSFSYD 205
GH + L +NIL S + D TVK+WDI+ + TL KH VT + F +
Sbjct: 1193 GHQSLTSGM---ELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQF--N 1247
Query: 206 GKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVW---LGDTDKVATTG 256
+ +VT S D +++WDV+ + A + VVW DT + G
Sbjct: 1248 SRFVVTSSDDGTVKLWDVKTGDFIRNLVALDSGGSGGVVWRIRANDTKLICAVG 1301
Score = 54.3 bits (129), Expect = 6e-07
Identities = 59/207 (28%), Positives = 87/207 (41%), Gaps = 43/207 (20%)
Query: 35 LQYENLRITSNAWDSNLIKC----NGKYISVN-------WNSSGGGAFAVI-PVKEVGKI 82
LQ+ RI S + D N +K NGK + W+S G + K+
Sbjct: 1001 LQFSGNRIVSGS-DDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNIIISGSTDRTLKV 1059
Query: 83 PDQ-----VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEG 137
D V +GHT+ V + V SGS D + +W+I + LH
Sbjct: 1060 WDMDSGACVHTLQGHTSTVRCMHL---HGSKVVSGSRDATLRVWDIEQGSCLH------- 1109
Query: 138 NPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDM 196
+L GH V + + ++ S + DY VKIW ++E TL+ H +
Sbjct: 1110 ---------VLVGHLAAVRCVQYDG---KLIVSGAYDYMVKIWHPERQECLHTLQGHTNR 1157
Query: 197 VTSMSFSYDGKHLVTVSRDKKLRVWDV 223
V S+ F DG H+V+ S D +RVWDV
Sbjct: 1158 VYSLQF--DGLHVVSGSLDTSIRVWDV 1182
Score = 52.4 bits (124), Expect = 2e-06
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 24/137 (17%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
+ +GH V+ F+ + + SGSDD + +W K +R
Sbjct: 989 VLKGHDDHVITC--LQFSGNRIVSGSDDNTLKVWSAVNG----------------KCLRT 1030
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDG 206
L GH+ G + ++ NI+ S S D T+K+WD+ TL+ H V M G
Sbjct: 1031 LVGHT---GGVWSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHL--HG 1085
Query: 207 KHLVTVSRDKKLRVWDV 223
+V+ SRD LRVWD+
Sbjct: 1086 SKVVSGSRDATLRVWDI 1102
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 60.8 bits (146), Expect = 7e-09
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 41/221 (18%)
Query: 27 YGQPAKKELQYENLRITSNAWDSN---LIKCNGKYISVNWNSSGGGAFAVIPVKEVGKIP 83
Y +K L NL I+ AW S+ L+ + W+ G +
Sbjct: 71 YDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTL--------- 121
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
+GH+ V +F+P +++ SGS D + IWE+ K K
Sbjct: 122 ------KGHSNYVFCCNFNP-PSNLIISGSFDETVKIWEV----------------KTGK 158
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDM--VTSMS 201
++ LS HS V + F+ + +++ S S D +IWD + + TL D V+ +
Sbjct: 159 CLKTLSAHSDPVSAVHFN-CSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVK 217
Query: 202 FSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQR 242
FS +GK+++T + D L++WD + + ++G KN++
Sbjct: 218 FSPNGKYILTATLDNTLKLWDYSRGRCLK---TYTGQKNEK 255
Score = 53.9 bits (128), Expect = 8e-07
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 29/159 (18%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPED------YGLHEYVDEEGNPKDL-- 142
GHT V FSP N +AS S D I IW + YG + + + D
Sbjct: 39 GHTEAVSSVKFSP-NGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSR 97
Query: 143 ------------------KPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ 184
K ++ L GHS V F+P N++ S S D TVKIW++
Sbjct: 98 LVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNP-PSNLIISGSFDETVKIWEVKT 156
Query: 185 EEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWD 222
+ TL H D V+++ F+ G +V+ S D R+WD
Sbjct: 157 GKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWD 195
Score = 50.8 bits (120), Expect = 7e-06
Identities = 33/90 (36%), Positives = 48/90 (52%), Gaps = 2/90 (2%)
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDG 206
L GH+ V + F P E LASSS D + IW + + TL H ++ +++S D
Sbjct: 37 LVGHTEAVSSVKFSPNGE-WLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDS 95
Query: 207 KHLVTVSRDKKLRVWDVRAEKIVSEGPAHS 236
LV+ S DK L++WDVR+ K + HS
Sbjct: 96 SRLVSASDDKTLKLWDVRSGKCLKTLKGHS 125
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 60.8 bits (146), Expect = 7e-09
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 75 PVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVD 134
P + + + P++ L GH + V F P ++ S S+D I +W+ +E D
Sbjct: 91 PKEWIPRPPEKYAL-SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-------YETGD 141
Query: 135 EEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-H 193
E R L GH+ V + F + +LAS S D T+K+WD E T+ H
Sbjct: 142 FE---------RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 194 PDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAH 235
V+S++ +G H+V+ SRDK +++W+V+ V H
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 233
Score = 50.4 bits (119), Expect = 9e-06
Identities = 38/147 (25%), Positives = 67/147 (44%), Gaps = 19/147 (12%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
+GHT V D F + ++AS S D I +W+ + + +R +
Sbjct: 147 KGHTDSVQDISFD-HSGKLLASCSADMTIKLWDF----------------QGFECIRTMH 189
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEE-VKFTLKHPDMVTSMSFSYDGKH 208
GH V + P ++I+ S+S D T+K+W++ VK H + V + + DG
Sbjct: 190 GHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248
Query: 209 LVTVSRDKKLRVWDVRAEKIVSEGPAH 235
+ + S D+ +RVW V ++ +E H
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREH 275
>At3g15980 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 921
Score = 60.8 bits (146), Expect = 7e-09
Identities = 42/156 (26%), Positives = 71/156 (44%), Gaps = 19/156 (12%)
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
D+V +F H+ + P ++++S SDD I +W+ +
Sbjct: 93 DKVKVFEAHSDYIRCVAVHPTLPYVLSS-SDDMLIKLWDWENGWAC-------------- 137
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSF 202
++ GHS V ++F+P N AS+SLD T+KIW++ + FTL H V + +
Sbjct: 138 -TQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY 196
Query: 203 --SYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHS 236
D +L+T S D +VWD + + V H+
Sbjct: 197 FTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHT 232
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 60.8 bits (146), Expect = 7e-09
Identities = 38/127 (29%), Positives = 69/127 (53%), Gaps = 7/127 (5%)
Query: 143 KPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMS 201
K V ++GH V + + P + ++AS+S D +V++W S + T + H V +++
Sbjct: 359 KCVERMTGHQNVVNDVKYSPDVK-LIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVA 417
Query: 202 FSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS 261
+S D + +V+ S+D L+VW V+ +K+ E P H+ + V W D +VA+ G
Sbjct: 418 WSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHAD-EVFGVDWAPDGSRVASGG----K 472
Query: 262 DRQIGVW 268
D+ I +W
Sbjct: 473 DKVIKLW 479
>Hs13376840 [R] KOG4155 FOG: WD40 repeat
Length = 305
Score = 60.5 bits (145), Expect = 9e-09
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 96 VLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKV 155
+L +SP ++ ASG+ DG I I++I LH L GH+ +
Sbjct: 151 ILSIAYSPDGKYL-ASGAIDGIINIFDIATGKLLHT----------------LEGHAMPI 193
Query: 156 GHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSR 214
L F P ++ +L ++S D +KI+D+ + TL H V +++F D H V+ S
Sbjct: 194 RSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSS 252
Query: 215 DKKLRVWDVRAEKIVSEGPAHSGAKNQRVVW----LGDTDKVATTGFSRLSDRQIGVWD 269
DK ++VWDV V H+ +Q VW G+ K+ + G D++I ++D
Sbjct: 253 DKSVKVWDVGTRTCV-----HTFFDHQDQVWGVKYNGNGSKIVSVG----DDQEIHIYD 302
>At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 876
Score = 60.1 bits (144), Expect = 1e-08
Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 31/169 (18%)
Query: 105 NDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLA 164
ND +V +GS+D IW +P DL V L GH R++ + F +
Sbjct: 510 NDSLVCTGSEDRTASIWRLP----------------DLVHVVTLKGHKRRIFSVEFSTVD 553
Query: 165 ENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDV 223
+ ++ +S D TVKIW IS T + H V SF DG V+ D L++W+V
Sbjct: 554 QCVMTASG-DKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNV 612
Query: 224 RAEKIVSEGPAHSGAKNQRVVWL----GDTDKVATTGFSRLSDRQIGVW 268
+ ++ H + VW T+ +AT G D I +W
Sbjct: 613 NTSECIATYDQH-----EDKVWALAVGKKTEMIATGG----GDAVINLW 652
Score = 59.3 bits (142), Expect = 2e-08
Identities = 36/122 (29%), Positives = 60/122 (48%), Gaps = 22/122 (18%)
Query: 108 IVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLA-EN 166
++A+ D K+ +W++ + H + GH V +LFHP + +N
Sbjct: 116 LLATAGADRKVLVWDVDGGFCTHYF----------------RGHKGVVSSILFHPDSNKN 159
Query: 167 ILASSSLDYTVKIWDISQEEVK-----FTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVW 221
IL S S D TV++WD++ + + KH VTS++ S DG L + RDK + +W
Sbjct: 160 ILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
Query: 222 DV 223
D+
Sbjct: 220 DL 221
>At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 60.1 bits (144), Expect = 1e-08
Identities = 58/239 (24%), Positives = 103/239 (42%), Gaps = 27/239 (11%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH + +S F + + SGS D +I +W+ V K L P+ + G
Sbjct: 167 GHEQEGYGLAWSSFKEGYLLSGSQDQRICLWD----------VSATATDKVLNPMHVYEG 216
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFS-YDGKH 208
H + + +H ENI S+ D + IWD+ +++ +K H + +SF+ ++
Sbjct: 217 HQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWV 276
Query: 209 LVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTD-KVATTGFSRLSDRQIGV 267
L T S D + ++D+R K+ + P H +K++ V+ + D T S DR++ V
Sbjct: 277 LATASSDSTVALFDLR--KLTA--PLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMV 332
Query: 268 WDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQNDELYELS 326
WD + D+ I + D +L+ G I F + DE + +S
Sbjct: 333 WDINRVG----------DEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVIS 381
Score = 54.3 bits (129), Expect = 6e-07
Identities = 47/206 (22%), Positives = 85/206 (40%), Gaps = 37/206 (17%)
Query: 81 KIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPK 140
K+ + + ++ GH + + D + N++I S DD ++ IW++ + H+
Sbjct: 206 KVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQ--------- 256
Query: 141 DLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSM 200
+ H R++ +L F+P E +LA++S D TV ++D+ + +
Sbjct: 257 -------VKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVF 309
Query: 201 SFSYDGKH---LVTVSRDKKLRVWDV--------RAEKIVSEGP-----AHSG--AKNQR 242
+D H L + D++L VWD+ E +GP +H G AK
Sbjct: 310 QVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISD 369
Query: 243 VVWLGDTDKVATTGFSRLSDRQIGVW 268
W D V + S D + VW
Sbjct: 370 FAWNKDEPWVIS---SVAEDNSLQVW 392
>7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 436
Score = 59.7 bits (143), Expect = 1e-08
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 23/191 (12%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
V L G + L T F+D IV +GS DG +W L +
Sbjct: 144 VYLQSGGSGNNLTTFSIIFSDKIV-TGSFDGTAKVWSATSGQSLCTFY------------ 190
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI-SQEEVKFTLKHPDMVTSMSFSY 204
GH+ ++ FHP+ +A++SLD + +I+D+ + E++ H V + F+
Sbjct: 191 ----GHTAELVAAEFHPVDGKSIATASLDGSARIYDVETSHELQQLTHHGAEVIAARFNR 246
Query: 205 DGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQ 264
DG+ L+T S D +WDVR++ + + HS A+ VW +AT D
Sbjct: 247 DGQMLLTGSFDHSAAIWDVRSKSLGHQLRGHS-AELSNCVWNFSGSLIATGSL----DNT 301
Query: 265 IGVWDAFNLEK 275
+WD L++
Sbjct: 302 ARIWDTRKLDQ 312
Score = 58.2 bits (139), Expect = 4e-08
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 29/161 (18%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYV--------------- 133
F GHTA+++ +F P + +A+ S DG I+++ + L +
Sbjct: 189 FYGHTAELVAAEFHPVDGKSIATASLDGSARIYDVETSHELQQLTHHGAEVIAARFNRDG 248
Query: 134 --------DEEGNPKDLKPVRM---LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI 182
D D++ + L GHS ++ + +++ + +++A+ SLD T +IWD
Sbjct: 249 QMLLTGSFDHSAAIWDVRSKSLGHQLRGHSAELSNCVWN-FSGSLIATGSLDNTARIWDT 307
Query: 183 SQ--EEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVW 221
+ +E+ +H D V +SF G+ L T S D RVW
Sbjct: 308 RKLDQELYLAARHSDEVLDVSFDAAGQLLATCSSDCTARVW 348
Score = 53.1 bits (126), Expect = 1e-06
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 63 WNSSG-----GGAFAVIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGK 117
WN SG G + + K+ ++ L H+ +VLD F ++A+ S D
Sbjct: 286 WNFSGSLIATGSLDNTARIWDTRKLDQELYLAARHSDEVLDVSFDAAGQ-LLATCSSDCT 344
Query: 118 IGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTV 177
+W + EG+ +L+ + +++GHS +V + F P + +L ++S D T
Sbjct: 345 ARVWRL------------EGS-SELEMLSLMAGHSDEVSKVCFSP-SGCMLLTASADNTA 390
Query: 178 KIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVW 221
++W + L H V S ++SY G ++T S+D R W
Sbjct: 391 RLWLTESGQCSQVLAGHEGEVFSCAYSYAGDAILTASKDNSCRFW 435
>7302218 [R] KOG0302 Ribosome Assembly protein
Length = 422
Score = 59.3 bits (142), Expect = 2e-08
Identities = 52/189 (27%), Positives = 86/189 (44%), Gaps = 24/189 (12%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
F GH + D+SP D ++A+G I +W ED G + VD+ R L
Sbjct: 184 FGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWTPVED-GTWK-VDQ----------RPL 231
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL-----KHPDMVTSMSFS 203
+GHS+ V L + P ++LAS S+D T++IWD K + H V +S++
Sbjct: 232 AGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVISWN 291
Query: 204 YDGKHLVTVSRDKKLRVWDVR---AEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRL 260
+ + + D L +WD+R ++K ++ H+ + + + AT S
Sbjct: 292 RNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHT----DHITTVEWSPAEATVLASGG 347
Query: 261 SDRQIGVWD 269
D QI +WD
Sbjct: 348 DDDQIALWD 356
>YNL006w [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 303
Score = 58.9 bits (141), Expect = 3e-08
Identities = 40/134 (29%), Positives = 66/134 (48%), Gaps = 14/134 (10%)
Query: 108 IVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENI 167
++A+ + G +WE+P + LKPV HS + +L ++
Sbjct: 173 MLAAANTKGNCYVWEMPN----------HTDASHLKPVTKFRAHSTYITRILLSSDVKH- 221
Query: 168 LASSSLDYTVKIWDISQE-EVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRA 225
LA+ S D+T ++W I + +++ TL H V +FS D +LVT S D +R+WD+
Sbjct: 222 LATCSADHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLST 281
Query: 226 EKIVSE-GPAHSGA 238
+IV + G H GA
Sbjct: 282 REIVRQYGGHHKGA 295
>Hs4757988 [R] KOG0645 WD40 repeat protein
Length = 339
Score = 58.9 bits (141), Expect = 3e-08
Identities = 38/139 (27%), Positives = 76/139 (54%), Gaps = 18/139 (12%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
V GH +V ++P + +++A+ S D + +WE+ E+ + + V
Sbjct: 98 VTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEE-------------DEYECV 143
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEE--VKFTLK-HPDMVTSMSF 202
+L+ H++ V H+++HP ++ +LAS+S D TVK++ +++ TL+ H V S++F
Sbjct: 144 SVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF 202
Query: 203 SYDGKHLVTVSRDKKLRVW 221
G+ L + S D+ +R+W
Sbjct: 203 DPSGQRLASCSDDRTVRIW 221
>CE29339 [S] KOG0295 WD40 repeat-containing protein
Length = 404
Score = 58.9 bits (141), Expect = 3e-08
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDG 206
L+GH + ++FHPL I+AS S D T+K+WD +++ TLK H D V ++ G
Sbjct: 102 LTGHRLPITRVIFHPLW-TIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAG 160
Query: 207 KHLVTVSRDKKLRVWD 222
K LV+ S D +++WD
Sbjct: 161 KQLVSCSSDLSIKLWD 176
Score = 55.8 bits (133), Expect = 2e-07
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 166 NILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVR 224
+IL S S D ++K W+I+ +V FTL H + V ++F GK+L++V+ DK LRVW++
Sbjct: 303 HILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELS 362
Query: 225 AEKIVSEGPAH 235
A++ + AH
Sbjct: 363 AQRCMKAIEAH 373
>SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 58.5 bits (140), Expect = 3e-08
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 81 KIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPK 140
K+ + + HT V D F P ++ ++AS SDD + I D NP+
Sbjct: 223 KVISPIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQIH------------DTRLNPE 270
Query: 141 DLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKF-TLK-HPDMVT 198
+ P +++ HS+ + + +P + +LA++S D TV +WD+ + TL+ H D V
Sbjct: 271 EEAP-KVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVY 329
Query: 199 SMSFS-YDGKHLVTVSRDKKLRVWDVRAEKIVSE 231
+ +S +D L + S D+++ +WD+ EKI E
Sbjct: 330 GLEWSPHDEPILASSSTDRRVCIWDL--EKIGEE 361
Score = 53.5 bits (127), Expect = 1e-06
Identities = 38/142 (26%), Positives = 69/142 (47%), Gaps = 11/142 (7%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
+ +GHTA+ ++P +A+G++D I +W++ + E K + P+
Sbjct: 177 VLKGHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQ----TQSFTSSE--TKVISPIAK 230
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI----SQEEVKFTLKHPDMVTSMSFS 203
H+ V + FHP E +LAS S D T++I D +E K H + +++ +
Sbjct: 231 YHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAIN 290
Query: 204 -YDGKHLVTVSRDKKLRVWDVR 224
++ L T S DK + +WD+R
Sbjct: 291 PFNDYLLATASADKTVALWDLR 312
>SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein
Length = 614
Score = 58.5 bits (140), Expect = 3e-08
Identities = 58/233 (24%), Positives = 97/233 (40%), Gaps = 39/233 (16%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
+F GH + DFS N + SGS D +W++ + + E G
Sbjct: 397 VFSGHEQDIYSLDFS-HNGRFIVSGSGDRTARLWDVETGQCILKLEIENG---------- 445
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSYDGK 207
V + P + +A SLD +++W +S V+ H + V S++FS D
Sbjct: 446 -------VTAIAISP-NDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSS 497
Query: 208 HLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQ---RVVWLGDTDKVATT--------G 256
L++ S DK ++VW+++A + V S K + + + G TD V + G
Sbjct: 498 ILLSGSLDKTIKVWELQATRSV----GLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWG 553
Query: 257 FSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGD 309
S DR + WD L+ G ++S I + F D + + +G GD
Sbjct: 554 LSGSKDRSMQFWD---LQTGQSYLTCQGHKNSVISVCFSPDGRQ--FASGSGD 601
>CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 496
Score = 58.5 bits (140), Expect = 3e-08
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 37/193 (19%)
Query: 92 HTAQVLDT------DFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
H +QV DT +FS ++HIV +G G + +W+ E +++K +
Sbjct: 197 HASQVADTRPVAFCEFSADSEHIVTAGWS-GSVAVWK------------REQCAQEIKFI 243
Query: 146 RMLSGHSRKVGHLLFHPLAENI-------LASSSLDYTVKIWDISQEEVKFTLK-HPDMV 197
GHS + G FHP A + S S D TV +W +SQE L+ HP V
Sbjct: 244 ----GHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRV 299
Query: 198 TSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTG- 256
+ ++F +G HL T D R++D+ +K + HS K+ V VA TG
Sbjct: 300 SKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHS--KSVADVAFHPDGSVALTGG 357
Query: 257 ---FSRLSDRQIG 266
+ R+ D + G
Sbjct: 358 HDCYGRVWDMRTG 370
Score = 55.5 bits (132), Expect = 3e-07
Identities = 45/181 (24%), Positives = 80/181 (43%), Gaps = 26/181 (14%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
R H D+S N V S S DG + +W + ++ P+ L
Sbjct: 253 RFHPGAFTQNDYSSLN---VVSCSYDGTVLLWSLSQE----------------SPIGELE 293
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDIS-QEEVKFTLKHPDMVTSMSFSYDGKH 208
H ++V + FHP + LA++ D T +++D++ ++E+ + H V ++F DG
Sbjct: 294 QHPQRVSKVAFHPNGHH-LATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSV 352
Query: 209 LVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVW 268
+T D RVWD+R + + H+ + V W+ + ++ T SD + VW
Sbjct: 353 ALTGGHDCYGRVWDMRTGRCIMFLDGHT-KEIHSVEWMPNGYEMITGS----SDNSMKVW 407
Query: 269 D 269
D
Sbjct: 408 D 408
>7303739 [BL] KOG1009 Chromatin assembly complex 1 subunit B/CAC2 (contains
WD40 repeats)
Length = 747
Score = 58.5 bits (140), Expect = 3e-08
Identities = 37/143 (25%), Positives = 74/143 (50%), Gaps = 7/143 (4%)
Query: 92 HTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV----RM 147
H V +SP N ++ASG D+ + IW+ D+ + VD +G + K V ++
Sbjct: 70 HQRAVNAVRWSP-NGELLASGDDESVVFIWKQKADHEVVNIVDADGCSEQDKEVWLTLKV 128
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI-SQEEVKFTLKHPDMVTSMSFSYDG 206
L GH + L + P ++ L S S+D T +WD+ S + + H V +++
Sbjct: 129 LRGHREDIYDLSWAPNSQ-FLVSGSVDNTAMLWDVHSGKSLAILDDHKGYVQGVAWDPCN 187
Query: 207 KHLVTVSRDKKLRVWDVRAEKIV 229
+++ T+S D+++R++D ++++
Sbjct: 188 QYIATMSTDRQMRIFDANTKRVL 210
>SPAC630.14c [R] KOG0266 WD40 repeat-containing protein
Length = 586
Score = 58.2 bits (139), Expect = 4e-08
Identities = 37/121 (30%), Positives = 62/121 (50%), Gaps = 18/121 (14%)
Query: 101 FSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLF 160
FSP ++ A+G +D +I IW+I + + R+L+GH +++ L F
Sbjct: 342 FSPDGKYL-ATGVEDQQIRIWDIAQK----------------RVYRLLTGHEQEIYSLDF 384
Query: 161 HPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRV 220
+ +++ S D TV +WD+ E K L D VT++ FS DG+ + S DK +R+
Sbjct: 385 SKDGKTLVSGSG-DRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRI 443
Query: 221 W 221
W
Sbjct: 444 W 444
Score = 54.7 bits (130), Expect = 5e-07
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 19/137 (13%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
L GH ++ DFS +V SGS D + +W++ E G K +
Sbjct: 371 LLTGHEQEIYSLDFSKDGKTLV-SGSGDRTVCLWDV-----------EAGEQK------L 412
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSYDGK 207
+ V ++F P + +A+ SLD ++IW S V+ H + V S++FS DGK
Sbjct: 413 ILHTDDGVTTVMFSPDGQ-FIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGK 471
Query: 208 HLVTVSRDKKLRVWDVR 224
+LV+ S D +++W+++
Sbjct: 472 YLVSGSLDNTIKLWELQ 488
>At2g19540 [R] KOG0302 Ribosome Assembly protein
Length = 469
Score = 58.2 bits (139), Expect = 4e-08
Identities = 44/150 (29%), Positives = 66/150 (43%), Gaps = 22/150 (14%)
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
D +P F GHTA V D +SP +++ AS S DG + +W+I
Sbjct: 261 DPIP-FAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDI---------------RLGKS 304
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI-----SQEEVKFTLKHPDMVT 198
P H+ V + ++ LA +LAS S D T I D+ V H +T
Sbjct: 305 PALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPIT 364
Query: 199 SMSFS-YDGKHLVTVSRDKKLRVWDVRAEK 227
S+ +S ++ L S D +L +WD+ EK
Sbjct: 365 SIEWSAHEASTLAVTSGDNQLTIWDLSLEK 394
>At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 913
Score = 58.2 bits (139), Expect = 4e-08
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
D++ +F H + P ++++S SDD I +W+ + +
Sbjct: 83 DKIKVFEAHADYIRCVAVHPTLPYVLSS-SDDMLIKLWDWEKGWLC-------------- 127
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSF 202
++ GHS V + F+P N AS+SLD T+KIW++ + FTL H V + +
Sbjct: 128 -TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDY 186
Query: 203 --SYDGKHLVTVSRDKKLRVWDVRAEKIVS--EGPAHS 236
D +L+T S D +VWD + + V EG H+
Sbjct: 187 FTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN 224
>7302979 [S] KOG0295 WD40 repeat-containing protein
Length = 411
Score = 58.2 bits (139), Expect = 4e-08
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 75 PVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVD 134
P + + + P++ L GH A + F P ++ S S+D I IW D+ EY
Sbjct: 91 PGEWIPRPPEKFSL-TGHRASITRVIFHPIFA-LMVSASEDATIRIW----DFETGEYE- 143
Query: 135 EEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ--EEVKFTLK 192
R L GH+ V + F + +LAS S D ++K+WD Q E +K
Sbjct: 144 -----------RSLKGHTDSVQDVAFDAQGK-LLASCSADLSIKLWDFQQSYECIKTMHG 191
Query: 193 HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAH 235
H V+S++F G ++++ SRD+ +++W+V V H
Sbjct: 192 HDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGH 234
Score = 57.4 bits (137), Expect = 7e-08
Identities = 62/232 (26%), Positives = 87/232 (36%), Gaps = 56/232 (24%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEY-----------VD 134
+ GH V F P D+++ S S D I +WE+ Y + Y V
Sbjct: 186 IKTMHGHDHNVSSVAFVPAGDYVL-SASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVH 244
Query: 135 EEG-----------------NPKDLKPVRMLSGHSRKVGHLLFHPLAEN----------- 166
EG N KD K L H V + + P A
Sbjct: 245 IEGSIFATCSNDQTIRVWLTNSKDCKVE--LRDHEHTVECIAWAPEAAASAINEAAGADN 302
Query: 167 --------ILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKK 217
LAS S D T++IWD+S TL H + V ++F GK+LV+ S DK
Sbjct: 303 KKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKT 362
Query: 218 LRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
+RVWD+R ++ + AH Q D K S D+ + VW+
Sbjct: 363 IRVWDLRNKRCMKTLYAH-----QHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
>CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 57.8 bits (138), Expect = 6e-08
Identities = 49/191 (25%), Positives = 86/191 (44%), Gaps = 28/191 (14%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
FR HT V S +VAS SDDG + ++ + +PV+
Sbjct: 119 FRTHTDFVNAVHPSRRGVTLVASASDDGTCRVHDM----------------RTKEPVKTY 162
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGK 207
+ ++ + F+ ++ ++ S +D +K+WD+ ++E+ +TL H D +T +S S GK
Sbjct: 163 TNRYQQTA-VTFNDSSDQVI-SGGIDNVLKVWDMRRDEITYTLTGHRDTITGISLSPSGK 220
Query: 208 HLVTVSRDKKLRVWDVR------AEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS 261
+++ S D +R WD+R V G H+ KN ++ T G S
Sbjct: 221 FIISNSMDCTVRQWDIRPFVPGQRSVGVFAGHNHNFEKNLLKCSWSPCERFITAG---SS 277
Query: 262 DRQIGVWDAFN 272
DR + VW+ +
Sbjct: 278 DRFLYVWETLS 288
>CE06574 [R] KOG0266 WD40 repeat-containing protein
Length = 501
Score = 57.8 bits (138), Expect = 6e-08
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 49/246 (19%)
Query: 100 DFS-PFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHL 158
DFS N +AS SDD + I+++ L R + GH+ V
Sbjct: 260 DFSWSSNSQFIASASDDTTVKIFDVISGACL----------------RTMRGHTNYVFCC 303
Query: 159 LFHPLAENILASSSLDYTVKIWDISQEE-VKFTLKHPDMVTSMSFSYDGKHLVTVSRDKK 217
F+P + +++AS+ D TV++WD VK H D +TS+S+++DG + T S D
Sbjct: 304 SFNPQS-SLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNTMATSSYDGC 362
Query: 218 LRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTG----------FSRLSDRQIGV 267
+RVWD A SG+ + +V DTD T S D + +
Sbjct: 363 IRVWD-----------AASGSCLKTLV---DTDHAPVTFVCFSPNGKYLLSAQLDSSLKL 408
Query: 268 WDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRI--LYVAGKGDGNIRYFEFQNDELYEL 325
WD +K +YN ++ + F + S + ++G DG I + Q ++ ++
Sbjct: 409 WDP---KKAKPLKYYNGHKNKKYCL-FANMSVPLGKHIISGSEDGRILVWSIQTKQIVQI 464
Query: 326 SEYQST 331
E +T
Sbjct: 465 LEGHTT 470
Score = 52.0 bits (123), Expect = 3e-06
Identities = 39/152 (25%), Positives = 66/152 (42%), Gaps = 20/152 (13%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
RGHT V F+P ++AS D + +W+ K V+ +
Sbjct: 294 RGHTNYVFCCSFNP-QSSLIASAGFDETVRVWDF----------------KTGLCVKCIP 336
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPD--MVTSMSFSYDGK 207
HS + + ++ N +A+SS D +++WD + TL D VT + FS +GK
Sbjct: 337 AHSDPITSISYNH-DGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGK 395
Query: 208 HLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAK 239
+L++ D L++WD + K + H K
Sbjct: 396 YLLSAQLDSSLKLWDPKKAKPLKYYNGHKNKK 427
>At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 949
Score = 57.8 bits (138), Expect = 6e-08
Identities = 46/144 (31%), Positives = 64/144 (43%), Gaps = 23/144 (15%)
Query: 108 IVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENI 167
+VA G DG I IW+ + + +G L+ KVG ++
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALR--------YNKVG---------SM 120
Query: 168 LASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAE 226
LAS S D + +WD+ E F L+ H D VT + F GK LV+ S+DK LRVWD+ +
Sbjct: 121 LASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQ 180
Query: 227 KIVSEGPAHSGAKNQRVVWLGDTD 250
+ H VW DTD
Sbjct: 181 HCMQIVSGHHSE-----VWSVDTD 199
>SPBC31F10.13c [DK] KOG0973 Histone transcription regulator HIRA WD repeat
superfamily
Length = 932
Score = 57.4 bits (137), Expect = 7e-08
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 82 IPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDY-GLHE-YVDEEGNP 139
+P Q+ HT V FSP N +ASGSDD + IW E GL + E +
Sbjct: 63 LPKQLCCMSTHTGTVTSVRFSP-NGQYLASGSDDRVVIIWHKEEAIPGLGSTFGSGEKHT 121
Query: 140 KDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWD-ISQEEVKFTLKHPDMVT 198
++ + R L GH + L + ++ S LD ++ +W+ + E +K H V
Sbjct: 122 ENWRSYRRLLGHDNDIQDLCWS-YDSQLVVSVGLDSSIIVWNGTTFERLKRIEAHQSHVK 180
Query: 199 SMSFSYDGKHLVTVSRDKKLRVW---DVRAEKIVSEGPAHSGAKN---QRVVWLGDTDKV 252
++F GK+ T S D+ ++VW D EK ++ GP ++ + +R W D +
Sbjct: 181 GITFDPAGKYFATESDDRTIKVWRVSDFSIEKTIT-GPFNNSPLSTYFRRPSWSPDGKHI 239
Query: 253 A 253
A
Sbjct: 240 A 240
>Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 508
Score = 57.4 bits (137), Expect = 7e-08
Identities = 61/220 (27%), Positives = 95/220 (42%), Gaps = 41/220 (18%)
Query: 104 FNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPL 163
++D + SG D I IW+ L+ +++L+GH+ G +L
Sbjct: 214 YDDEKIISGLRDNSIKIWD----------------KTSLECLKVLTGHT---GSVLCLQY 254
Query: 164 AENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSYDGKHLVTVSRDKKLRVWD 222
E ++ + S D TV++WD++ EV TL H + V + FS +VT S+D+ + VWD
Sbjct: 255 DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWD 312
Query: 223 VRAEKIVSEG---PAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLE-KGNL 278
+ + ++ H A N VV D V+ +G DR I VW E L
Sbjct: 313 MASATDITLRRVLVGHRAAVN--VVDFDDKYIVSASG-----DRTIKVWSTSTCEFVRTL 365
Query: 279 GGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQ 318
G GI Y D L V+G D IR ++ +
Sbjct: 366 NG-----HKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 397
Score = 54.7 bits (130), Expect = 5e-07
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 29/187 (15%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH A V DF +D + S S D I +W + + VR L+G
Sbjct: 327 GHRAAVNVVDF---DDKYIVSASGDRTIKVW----------------STSTCEFVRTLNG 367
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
H R + L + + ++ S S D T+++WDI L+ H ++V + F D K +
Sbjct: 368 HKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 422
Query: 210 VTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS---DRQIG 266
V+ + D K++VWD++A + PA + V G ++ F +S D I
Sbjct: 423 VSGAYDGKIKVWDLQA-ALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTIL 481
Query: 267 VWDAFNL 273
+WD N+
Sbjct: 482 IWDFLNV 488
>Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 529
Score = 57.4 bits (137), Expect = 7e-08
Identities = 61/220 (27%), Positives = 95/220 (42%), Gaps = 41/220 (18%)
Query: 104 FNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPL 163
++D + SG D I IW+ L+ +++L+GH+ G +L
Sbjct: 235 YDDEKIISGLRDNSIKIWD----------------KTSLECLKVLTGHT---GSVLCLQY 275
Query: 164 AENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSYDGKHLVTVSRDKKLRVWD 222
E ++ + S D TV++WD++ EV TL H + V + FS +VT S+D+ + VWD
Sbjct: 276 DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWD 333
Query: 223 VRAEKIVSEG---PAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLE-KGNL 278
+ + ++ H A N VV D V+ +G DR I VW E L
Sbjct: 334 MASATDITLRRVLVGHRAAVN--VVDFDDKYIVSASG-----DRTIKVWSTSTCEFVRTL 386
Query: 279 GGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQ 318
G GI Y D L V+G D IR ++ +
Sbjct: 387 NG-----HKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 418
Score = 54.7 bits (130), Expect = 5e-07
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 29/187 (15%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH A V DF +D + S S D I +W + + VR L+G
Sbjct: 348 GHRAAVNVVDF---DDKYIVSASGDRTIKVW----------------STSTCEFVRTLNG 388
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
H R + L + + ++ S S D T+++WDI L+ H ++V + F D K +
Sbjct: 389 HKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 443
Query: 210 VTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS---DRQIG 266
V+ + D K++VWD++A + PA + V G ++ F +S D I
Sbjct: 444 VSGAYDGKIKVWDLQA-ALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTIL 502
Query: 267 VWDAFNL 273
+WD N+
Sbjct: 503 IWDFLNV 509
>Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 542
Score = 57.4 bits (137), Expect = 7e-08
Identities = 61/220 (27%), Positives = 95/220 (42%), Gaps = 41/220 (18%)
Query: 104 FNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPL 163
++D + SG D I IW+ L+ +++L+GH+ G +L
Sbjct: 248 YDDEKIISGLRDNSIKIWD----------------KTSLECLKVLTGHT---GSVLCLQY 288
Query: 164 AENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSYDGKHLVTVSRDKKLRVWD 222
E ++ + S D TV++WD++ EV TL H + V + FS +VT S+D+ + VWD
Sbjct: 289 DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWD 346
Query: 223 VRAEKIVSEG---PAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLE-KGNL 278
+ + ++ H A N VV D V+ +G DR I VW E L
Sbjct: 347 MASATDITLRRVLVGHRAAVN--VVDFDDKYIVSASG-----DRTIKVWSTSTCEFVRTL 399
Query: 279 GGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQ 318
G GI Y D L V+G D IR ++ +
Sbjct: 400 NG-----HKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 431
Score = 54.7 bits (130), Expect = 5e-07
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 29/187 (15%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH A V DF +D + S S D I +W + + VR L+G
Sbjct: 361 GHRAAVNVVDF---DDKYIVSASGDRTIKVW----------------STSTCEFVRTLNG 401
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
H R + L + + ++ S S D T+++WDI L+ H ++V + F D K +
Sbjct: 402 HKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 456
Query: 210 VTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS---DRQIG 266
V+ + D K++VWD++A + PA + V G ++ F +S D I
Sbjct: 457 VSGAYDGKIKVWDLQA-ALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTIL 515
Query: 267 VWDAFNL 273
+WD N+
Sbjct: 516 IWDFLNV 522
>Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 707
Score = 57.4 bits (137), Expect = 7e-08
Identities = 46/160 (28%), Positives = 71/160 (43%), Gaps = 28/160 (17%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
+GHT +V F + V SGS D I +W++ E GN + L+
Sbjct: 538 QGHTNRVYSLQFDGIH---VVSGSLDTSIRVWDV-----------ETGNC-----IHTLT 578
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL----KHPDMVTSMSFSYD 205
GH + L +NIL S + D TVKIWDI + TL KH VT + F+ +
Sbjct: 579 GHQSLTSGM---ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 635
Query: 206 GKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVW 245
++T S D +++WD++ + + + VVW
Sbjct: 636 --FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW 673
>Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 627
Score = 57.4 bits (137), Expect = 7e-08
Identities = 46/160 (28%), Positives = 71/160 (43%), Gaps = 28/160 (17%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
+GHT +V F + V SGS D I +W++ E GN + L+
Sbjct: 458 QGHTNRVYSLQFDGIH---VVSGSLDTSIRVWDV-----------ETGNC-----IHTLT 498
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL----KHPDMVTSMSFSYD 205
GH + L +NIL S + D TVKIWDI + TL KH VT + F+ +
Sbjct: 499 GHQSLTSGM---ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 555
Query: 206 GKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVW 245
++T S D +++WD++ + + + VVW
Sbjct: 556 --FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW 593
>At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 554
Score = 57.4 bits (137), Expect = 7e-08
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
+F+GH V +FSP N + +ASG +D + IW++ + K + +
Sbjct: 418 VFQGHIKPVFSVNFSP-NGYHLASGGEDNQCRIWDL----------------RMRKSLYI 460
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIW---DISQEEVKFTLKHPDMVTSMSFSY 204
+ H+ V + + P LA++S D V IW D S VK H V S+ +
Sbjct: 461 IPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSL--VKSLAGHESKVASLDITA 518
Query: 205 DGKHLVTVSRDKKLRVW 221
D + TVS D+ +++W
Sbjct: 519 DSSCIATVSHDRTIKLW 535
Score = 53.9 bits (128), Expect = 8e-07
Identities = 36/131 (27%), Positives = 63/131 (47%), Gaps = 18/131 (13%)
Query: 108 IVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENI 167
I+A+ S G +WE+P+ + +L H + ++F P+ ++
Sbjct: 269 ILATCSLSGVTKLWEMPQV---------------TNTIAVLKDHKERATDVVFSPV-DDC 312
Query: 168 LASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVR--A 225
LA++S D T K+W ++ H D + ++F GK+L T S DK R+WD+ A
Sbjct: 313 LATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGA 372
Query: 226 EKIVSEGPAHS 236
E ++ EG + S
Sbjct: 373 ELLLQEGHSRS 383
Score = 52.8 bits (125), Expect = 2e-06
Identities = 52/230 (22%), Positives = 97/230 (41%), Gaps = 34/230 (14%)
Query: 78 EVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWE----IPEDYGLH--- 130
E+ ++ + + + + H + D FSP +D +A+ S D +W+ + + + H
Sbjct: 283 EMPQVTNTIAVLKDHKERATDVVFSPVDD-CLATASADRTAKLWKTDGTLLQTFEGHLDR 341
Query: 131 ----------EYVDEEGNPKDLK--------PVRMLSGHSRKVGHLLFHPLAENILASSS 172
+Y+ K + + + GHSR V + F + AS
Sbjct: 342 LARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGA-LAASCG 400
Query: 173 LDYTVKIWDI-SQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSE 231
LD ++WD+ + + H V S++FS +G HL + D + R+WD+R K +
Sbjct: 401 LDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI 460
Query: 232 GPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDA--FNLEKGNLG 279
PAH+ +Q + +AT + D ++ +W F+L K G
Sbjct: 461 IPAHANLVSQVKYEPQEGYFLATASY----DMKVNIWSGRDFSLVKSLAG 506
>At2g22040 [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 312
Score = 57.4 bits (137), Expect = 7e-08
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 36/169 (21%)
Query: 105 NDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNP------------------------- 139
N + SG +G I +W++ D E V E G P
Sbjct: 136 NQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVW 195
Query: 140 ---------KDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFT 190
+ +P+ L H+ + L P LA++S D TVKIW++ +++
Sbjct: 196 RSLCERQTMTEFEPLHKLQAHNSHILKCLLSP-GNKYLATASSDKTVKIWNLDGFKLEKV 254
Query: 191 LK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGA 238
L H V FS DG++LVT S D R+W +RA K AH A
Sbjct: 255 LTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKA 303
>At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 415
Score = 57.4 bits (137), Expect = 7e-08
Identities = 48/185 (25%), Positives = 83/185 (43%), Gaps = 23/185 (12%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEI---PEDYGLHEYVDEEGNPKDLKPVRM 147
GH + +SPF + + SGS D KI +W++ P+D K L + +
Sbjct: 166 GHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQD-------------KVLNAMFV 212
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFS-YD 205
GH + + +H EN+ S+ D + IWD +++ +K H V +SF+ ++
Sbjct: 213 YEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFN 272
Query: 206 GKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTD-KVATTGFSRLSDRQ 264
L T S D + ++D+R P H + ++ V+ + D T S DR+
Sbjct: 273 EWVLATASSDSTVALFDLRK----LNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRR 328
Query: 265 IGVWD 269
+ VWD
Sbjct: 329 LMVWD 333
Score = 55.8 bits (133), Expect = 2e-07
Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 81 KIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPK 140
K+ + + ++ GH + + D + N+++ S +DG++ IW+ + H+
Sbjct: 205 KVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQ--------- 255
Query: 141 DLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSM 200
+ H R+V +L F+P E +LA++S D TV ++D+ + +
Sbjct: 256 -------VKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVF 308
Query: 201 SFSYDGKH---LVTVSRDKKLRVWDV 223
+D H L + D++L VWD+
Sbjct: 309 QVEWDPNHETVLASSGEDRRLMVWDL 334
Score = 50.4 bits (119), Expect = 9e-06
Identities = 37/155 (23%), Positives = 69/155 (43%), Gaps = 34/155 (21%)
Query: 92 HTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGH 151
H +V F+PFN+ ++A+ S D + ++++ K P+ ++S H
Sbjct: 259 HEREVNYLSFNPFNEWVLATASSDSTVALFDLR---------------KLNAPLHVMSSH 303
Query: 152 SRKVGHLLFHPLAENILASSSLDYTVKIWD---ISQEEVKFTLKHPDMVTSMSFSYDGKH 208
+V + + P E +LASS D + +WD + +E+++ L D + FS+ G
Sbjct: 304 EGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHK 363
Query: 209 ---------------LVTVSRDKKLRVWDVRAEKI 228
+ +V+ D L+VW + AE I
Sbjct: 364 AKISDFAWNKNEPWVIASVAEDNSLQVWQM-AESI 397
>7293188 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 296
Score = 57.4 bits (137), Expect = 7e-08
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 20/143 (13%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH + F+ + D+ V S D G I W++ K L+G
Sbjct: 58 GHNRSIDCVRFA-YKDNFVYSADDIGIIRRWDLNSQ----------------KIYSTLNG 100
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEE--VKFTLKHPDMVTSMSFSYDGKH 208
H + V L F+P E +++ S+ D TV++WD+ E +K H V S+ FS DG
Sbjct: 101 HMKSVRTLDFNPSGEYVVSGSN-DTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSPDGLW 159
Query: 209 LVTVSRDKKLRVWDVRAEKIVSE 231
+ + + + +WD+R K + E
Sbjct: 160 IASAGLEGSILIWDIRKSKQIME 182
>At3g18130 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 57.0 bits (136), Expect = 1e-07
Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 38/249 (15%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPED---YGLHEYVDEEGNPKDLKP 144
+ R HT V N I+ + S D I +W++ +D YG+ +
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQ------------- 56
Query: 145 VRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ-EEVKFTLKHPDMVTSMSFS 203
R L+GHS V ++ + L S S D +++WD++ E + + H V S++FS
Sbjct: 57 -RRLTGHSHFVEDVVLSSDGQFAL-SGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFS 114
Query: 204 YDGKHLVTVSRDKKLRVWDVRAE--KIVSEGPAHSGAKNQRVVWLG----DTDKVATTGF 257
D + +V+ SRD+ +++W+ E +SEG H W+ + + T
Sbjct: 115 TDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHK-------EWVSCVRFSPNTLVPTIV 167
Query: 258 SRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEF 317
S D+ + VW+ N + N ++ SG L + L +G DG I ++
Sbjct: 168 SASWDKTVKVWNLQNCKLRN-----SLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
Query: 318 -QNDELYEL 325
+ +LY L
Sbjct: 223 AEGKKLYSL 231
>At2g05720 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 276
Score = 57.0 bits (136), Expect = 1e-07
Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 43/205 (20%)
Query: 78 EVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEG 137
EV ++ +++ + +GH V D FS +D +A+ S D IW+ +G
Sbjct: 91 EVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWK------------TDG 138
Query: 138 NPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI-SQEEVKFTLKHPDM 196
L + ASS D ++WD+ + + H
Sbjct: 139 T------------------------LLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQ 174
Query: 197 VTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTG 256
V S+ FS +G HL + D + R+WD+R K++ PAH +Q + +AT
Sbjct: 175 VLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATAS 234
Query: 257 FSRLSDRQIGVWDA--FNLEKGNLG 279
D + +W F+L K +G
Sbjct: 235 ----HDMNVNIWSGRDFSLVKSLVG 255
>SPBC354.03 [R] KOG0266 WD40 repeat-containing protein
Length = 380
Score = 56.6 bits (135), Expect = 1e-07
Identities = 38/116 (32%), Positives = 54/116 (45%), Gaps = 18/116 (15%)
Query: 109 VASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENIL 168
+AS SDD I IW+ + VR L GH+ V + F+PL +L
Sbjct: 111 LASASDDKTIRIWDFEKRCS----------------VRCLKGHTNYVSSIDFNPLG-TLL 153
Query: 169 ASSSLDYTVKIWDISQEE-VKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDV 223
S S D TV+IW++ ++ H + + S+S S DG T S D R+WDV
Sbjct: 154 VSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDV 209
Score = 53.1 bits (126), Expect = 1e-06
Identities = 56/225 (24%), Positives = 96/225 (41%), Gaps = 32/225 (14%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
V +GHT V DF+P +V SGS D + IW N +D +
Sbjct: 131 VRCLKGHTNYVSSIDFNPLGTLLV-SGSWDETVRIW----------------NLQDGTCL 173
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMV--TSMSFS 203
RML HS + + + A++S D +IWD+ + TL P V +++ F+
Sbjct: 174 RMLPAHSEPIISVSISADG-TLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFT 232
Query: 204 YDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVW--------LGDTDKVATT 255
+ K+L+ + + ++R+WD R ++V +H + + W +T+ +
Sbjct: 233 ENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTR-YSMSWDCYSSKNIPKNTEALPNN 291
Query: 256 GFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNR 300
S D + + DA+ L G D S+ I++ DDS R
Sbjct: 292 DSSYPDDAESFMHDAYLLIPSEDGTIQITDPSTKIII---DDSIR 333
Score = 51.6 bits (122), Expect = 4e-06
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH V SP N +A+ S DG I IW + + L G
Sbjct: 52 GHEKSVTCVSVSP-NKRWIATSSSDGTIKIW----------------SALTFRLECTLFG 94
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQE-EVKFTLKHPDMVTSMSFSYDGKHL 209
H R + + + LAS+S D T++IWD + V+ H + V+S+ F+ G L
Sbjct: 95 HYRGISQVKW-ATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLL 153
Query: 210 VTVSRDKKLRVWDVRAEKIVSEGPAHS 236
V+ S D+ +R+W+++ + PAHS
Sbjct: 154 VSGSWDETVRIWNLQDGTCLRMLPAHS 180
>Hs4557515 [S] KOG4328 WD40 protein
Length = 427
Score = 56.6 bits (135), Expect = 1e-07
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 99 TDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYV----DEEGNP----KDLKPVRMLSG 150
T F +I+ + I IW D + D GN D K + L
Sbjct: 181 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRM 240
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVK----FTLKHPDMVTSMSFSYDG 206
H +KV H+ +P + LA++S+D TVKIWD+ Q K ++L H V + FS DG
Sbjct: 241 HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDG 300
Query: 207 KHLVTVSRDKKLRVW 221
L+T + ++RV+
Sbjct: 301 ARLLTTDQKSEIRVY 315
>CE06090 [T] KOG0279 G protein beta subunit-like protein
Length = 325
Score = 56.6 bits (135), Expect = 1e-07
Identities = 42/138 (30%), Positives = 69/138 (49%), Gaps = 10/138 (7%)
Query: 91 GHTAQVLDTDFSPFNDHI-VASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
GHT V ND V S S D I +W++ + E P +PVR L+
Sbjct: 14 GHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDE------GPIG-RPVRSLT 66
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQE-EVKFTLKHPDMVTSMSFSYDGKH 208
GH+ V ++ + L S S D T+++WD++Q + + H V S++FS D +
Sbjct: 67 GHNHFVSDVVISSDGQFAL-SGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQ 125
Query: 209 LVTVSRDKKLRVWDVRAE 226
+V+ SRDK +++W+ A+
Sbjct: 126 IVSGSRDKSIKLWNTLAQ 143
>7299504 [R] KOG2444 WD40 repeat protein
Length = 476
Score = 56.6 bits (135), Expect = 1e-07
Identities = 48/157 (30%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 161 HPLAENILASSSLDYTVKIWDISQEEVKFTLKH-PDMVTSMSFSYDGKHLVTVSRDKKLR 219
H L EN+ AS TVK+WD+ + F LK D +T ++ + K L+ S D L
Sbjct: 228 HVLNENLFASGDDAGTVKLWDLRTKNAIFELKELEDQITQLTTNEQSKLLLATSADGYLT 287
Query: 220 VWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLEKGNLG 279
+++ A K+ + + N V+ GD+ V T RL + G G
Sbjct: 288 TFNISARKMYVQSEPYEEELNCMGVYRGDSKLVVGTSKGRL----------YTYNWGQFG 337
Query: 280 GFYNVDQSSGILMP---FYDDSNRILYVAGKGDGNIR 313
Y+ D GI P ++RI VAG+ DGNIR
Sbjct: 338 --YHCDMYPGIKSPISLMIPITDRIACVAGE-DGNIR 371
>7296695 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 439
Score = 56.6 bits (135), Expect = 1e-07
Identities = 44/144 (30%), Positives = 67/144 (45%), Gaps = 21/144 (14%)
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
+ V +++ H + FSP + V SGSDDG + IW+ EE
Sbjct: 220 NNVKMYQAHKEAIRGISFSPTDSKFV-SGSDDGTLRIWDFMR-------CQEE------- 264
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLD--YTVKIWDISQEEVKFTL-KHPDMVTSM 200
R+L GH V + +HP + ++ S S D +KIWD TL H V +
Sbjct: 265 --RVLRGHGADVKCVHWHP-QKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDL 321
Query: 201 SFSYDGKHLVTVSRDKKLRVWDVR 224
++ +G LVT SRD L+++D+R
Sbjct: 322 KWNDNGNWLVTASRDHLLKLFDIR 345
Score = 51.2 bits (121), Expect = 5e-06
Identities = 31/127 (24%), Positives = 56/127 (43%), Gaps = 19/127 (14%)
Query: 59 ISVNWNSSGGGAFA-----VIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGS 113
+ + WN +G ++ + ++ + ++V +FRGH + + P ++ + SG
Sbjct: 319 MDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGG 378
Query: 114 DDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSL 173
DG I W + G D + + + H V L +HPL +IL S S
Sbjct: 379 SDGSILFWNV-------------GRSTDKEIGCVETAHDSIVWTLAWHPLG-HILCSGSN 424
Query: 174 DYTVKIW 180
D+T+K W
Sbjct: 425 DHTIKFW 431
>SPBC577.09 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 404
Score = 56.2 bits (134), Expect = 2e-07
Identities = 38/153 (24%), Positives = 68/153 (43%), Gaps = 13/153 (8%)
Query: 108 IVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENI 167
++ SG + I +W++ + + DE+ L V + H + L + P I
Sbjct: 62 LMVSGGANSSINVWDLQN---IDQKEDEDLILDTLNAVPARTSHKFGITDLHWFPFDNGI 118
Query: 168 LASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSYDGKH--LVTVSRDKKLRVWDVRA 225
SSS D+T+K+WD+S + +T DM+ S ++S H + T R +R+ D+++
Sbjct: 119 FTSSSFDHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIASHCLIATAYRSSSIRLCDMQS 178
Query: 226 EKIVSEGPAHSG--------AKNQRVVWLGDTD 250
H+G KN+ V+ G D
Sbjct: 179 GSYTHSLSGHTGNVLAVDWCPKNEFVLASGSAD 211
>Hs22052079 [R] KOG0266 WD40 repeat-containing protein
Length = 426
Score = 56.2 bits (134), Expect = 2e-07
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
Query: 113 SDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGH-SRKVGHLLFHPLAENILASS 171
S DGK + D+G+ +D E ++ V ++ H +R + F P ++ + AS
Sbjct: 195 SPDGKYVVSGFDVDHGIC-IMDAE----NITTVSVIKDHHTRSITSCCFDPDSQRV-ASV 248
Query: 172 SLDYTVKIWDISQEEVKFTLK--HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIV 229
SLD +KIWD++ + T+ H + +++ F++ G L T S DK L++W+V +
Sbjct: 249 SLDRCIKIWDVTSQATLLTITKAHSNAISNCCFTFSGHFLCTSSWDKNLKIWNVHTGEFR 308
Query: 230 SEG------PAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
+ G H G+ + + D+ + + GF DR + +WD
Sbjct: 309 NCGACVTLMQGHEGSVSS-CHFARDSSFLISGGF----DRTVAIWD 349
>Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 345
Score = 56.2 bits (134), Expect = 2e-07
Identities = 44/159 (27%), Positives = 74/159 (45%), Gaps = 19/159 (11%)
Query: 76 VKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDE 135
+ + GK+ D +F GHTA V D ++ ++ + +DD K+ IW+
Sbjct: 125 IPKEGKV-DARTIFTGHTAVVEDVFWNLLHESLFRLVADDQKLMIWDTR----------- 172
Query: 136 EGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL--KH 193
+ KP + ++ +V L F+P E ILA+ S D TV +WD+ ++K H
Sbjct: 173 --SKNTSKPSHSVDAYTAEVNCLSFNPYGEFILATGSADKTVALWDLRNLKLKVHSFESH 230
Query: 194 PDMVTSMSFS-YDGKHLVTVSRDKKLRVWDVRAEKIVSE 231
D + + +S ++ L + D L VWD+ KI E
Sbjct: 231 KDEIFQVQWSPHNETILASSGTDHGLNVWDL--SKITEE 267
>CE28405 [S] KOG0282 mRNA splicing factor
Length = 567
Score = 56.2 bits (134), Expect = 2e-07
Identities = 50/187 (26%), Positives = 78/187 (40%), Gaps = 24/187 (12%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
V +RGH V + P + H+ S S D KI +WE+ + + V
Sbjct: 268 VHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDRQ---------------RVV 312
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVK--FTLKHPDMVTSMSFS 203
R +GH V + F+ L S+S D VK+WD +VK F H
Sbjct: 313 RTYAGHKLPVREVAFNNEGTEFL-SASFDRYVKLWDTETGQVKQRFHTGHVPYCLKYHPD 371
Query: 204 YDGKHLVTVS-RDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSD 262
D H+ V ++KK+ WD R+ +IV E H A N + + + A+T D
Sbjct: 372 DDKNHMFLVGMQNKKIIQWDSRSGEIVQEYDRHLQAVNS-ITFFDKNRRFASTS----DD 426
Query: 263 RQIGVWD 269
+ + +W+
Sbjct: 427 KSVRIWE 433
>At3g18060 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 609
Score = 56.2 bits (134), Expect = 2e-07
Identities = 57/240 (23%), Positives = 91/240 (37%), Gaps = 38/240 (15%)
Query: 83 PDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDY--------------- 127
P +V ++ H +SP N +ASG G + IW D+
Sbjct: 46 PLKVSIYGEHAYPATVARYSP-NGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDD 104
Query: 128 ------GLHEYVDEEGNPKDLKPVRM---------LSGHSRKVGHLLFHPLAENILASSS 172
G+ +G K L M GHSR+V P + +
Sbjct: 105 LQWSADGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCG 164
Query: 173 LDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSE 231
D+ V ++ + K + + H + V + F+ DG +TVS DKK ++D + +I+ E
Sbjct: 165 EDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGE 224
Query: 232 GPAHSGAKNQ--RVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSG 289
+ G K V W D +V T +D+ +WD + G+L N SSG
Sbjct: 225 LSSDDGHKGSIYAVSWSPDGKQVLTVS----ADKSAKIWDISDNGSGSLNTTLNCPGSSG 280
>7297759 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 420
Score = 56.2 bits (134), Expect = 2e-07
Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 25/239 (10%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK-- 143
V + +GH V SP A+GS D + +W D + EG+ K +K
Sbjct: 187 VSVCKGHERGVDSVSVSPDGLRF-ATGSWDTMLKVWSAELDDAV------EGSSKRMKES 239
Query: 144 ----PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTS 199
P L GH V + + + L + S D+T+K+WD+S E +K + +
Sbjct: 240 GVRTPKITLQGHRESVSAVQW--MDATTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFD 297
Query: 200 MSFSYDGKHLVTVSRDKKLRVWDVRAEK--IVSEGPAHSGAKNQRVVWLGDTDKVATTGF 257
S+S + ++T S DK LR++D R + +V A Q V+W + + +G
Sbjct: 298 ASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSG- 356
Query: 258 SRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFE 316
D Q +WD + Y++ G + D SN V+G D +R F+
Sbjct: 357 --AYDNQNKLWDC----RSPKAPLYDL-LGHGEKVLDIDWSNPKYIVSGGVDNTVRVFK 408
>ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 408
Score = 55.8 bits (133), Expect = 2e-07
Identities = 52/209 (24%), Positives = 91/209 (42%), Gaps = 29/209 (13%)
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
+ + + +GHT V D FS ND S SDD I IW+ E K
Sbjct: 171 NNIQIIQGHTEAVRDLSFS-HNDSKFCSASDDSTIKIWDSIE----------------AK 213
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSF 202
+L GH+ V +H ++++AS+ D VK+WD E TL H + + ++ +
Sbjct: 214 EESVLRGHNWDVRAAQWHKY-KSLIASAGKDNLVKMWDPRTAEELCTLHHHKNTILALKW 272
Query: 203 SYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSD 262
D +L+T +D+ +++ D+R V H + V +G + S ++
Sbjct: 273 MGDENYLLTGGKDQVIKMVDIRTMTDVFTYKNH----KKEVTSIGTHPCIPDIFVSGGTE 328
Query: 263 RQIGVWDAFN------LEKGNLGGFYNVD 285
I W A+ +E+G+ G +++D
Sbjct: 329 GGIYFWQAYTQVPLEVIEEGHEGTVWSLD 357
>7302603 [R] KOG0289 mRNA splicing factor
Length = 505
Score = 55.8 bits (133), Expect = 2e-07
Identities = 47/170 (27%), Positives = 77/170 (44%), Gaps = 30/170 (17%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPE-------------------- 125
V + +GHT ++ + P N+ V +GS D I IW +P
Sbjct: 258 VAILKGHTKKITKVIYHP-NEDTVITGSPDMNIRIWHVPTSQTQLLLRCHEGPVTGLSLH 316
Query: 126 ---DYGLHEYVDEEGNPKDLKPVRMLSG--HSRKVGHLL--FHPLAENILASSSLDYTVK 178
DY L D+ D++ R+L+ + +VG FHP I + ++D VK
Sbjct: 317 PTGDYLLSTSSDKHWAFSDIRTGRLLTKVIDTAEVGLTTAQFHPDGL-IFGTGTVDSQVK 375
Query: 179 IWDIS-QEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEK 227
IWD+ Q V H ++++SFS +G +L T + D +++WD+R K
Sbjct: 376 IWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKLWDLRKLK 425
>7301821 [S] KOG0269 WD40 repeat-containing protein
Length = 776
Score = 55.8 bits (133), Expect = 2e-07
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 40/241 (16%)
Query: 38 ENLRITSN--AW---DSNLIKCNGKYISVNWNSSGGGAFAVIPVKEVGKIPDQVPLFRGH 92
+NL ++N AW DSNL+ ++ G +V + + G+ Q+ ++ H
Sbjct: 62 QNLSYSANDVAWSTLDSNLLA----------TAATNGVVSVWDLSKFGR-QKQLLVYNEH 110
Query: 93 TAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHS 152
F +I+ SGS DG I ++I D ++ Y + +D+K
Sbjct: 111 ERTAHTVTFHSSEPNILISGSQDGTIKCFDIRSDKSINTYFCNSESVRDVK--------- 161
Query: 153 RKVGHLLFHPLAENILASSSLDYTVKIWDISQEE---VKFTLKHPDMVTSMSFSYDGKHL 209
F P +NI ++ S + TV++WD+ + + V+FT H V + + L
Sbjct: 162 -------FSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFT-AHYGPVYTCDWHPTRNWL 213
Query: 210 VTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGD-TDKVATTGFSRLSDRQIGVW 268
T SRDK+++VW++ + E H+ A RV W + T +A+ + D + VW
Sbjct: 214 ATGSRDKQIKVWNMDGRPGL-EHTIHTIAVVGRVKWRPERTYHIASCAL--VVDYSVHVW 270
Query: 269 D 269
D
Sbjct: 271 D 271
>YDL145c [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1201
Score = 55.5 bits (132), Expect = 3e-07
Identities = 46/156 (29%), Positives = 69/156 (43%), Gaps = 19/156 (12%)
Query: 85 QVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEI---------PEDYGLHEYVDE 135
++ GH V+ F P +D IV++ D+ I IW+I P E +
Sbjct: 129 EIACLTGHNHFVMCAQFHPTDDLIVSASLDE-TIRIWDISGLRKRHSAPGTSSFEEQMSA 187
Query: 136 E-----GNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQE---EV 187
+ G+ D +L GH+R V FHP ++ S S D VK+W +S EV
Sbjct: 188 QQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLP-LIVSGSDDRQVKLWRMSATKAWEV 246
Query: 188 KFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDV 223
H + V S+ F +++V DK LRVWD+
Sbjct: 247 DTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDL 282
Score = 50.4 bits (119), Expect = 9e-06
Identities = 41/159 (25%), Positives = 66/159 (40%), Gaps = 23/159 (14%)
Query: 118 IGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTV 177
I +W+ LH + D EG PVR L FHP + I S+ DYT+
Sbjct: 35 IQLWDYRMGTLLHRFEDHEG------PVRGLD----------FHP-TQPIFVSAGDDYTI 77
Query: 178 KIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHS 236
K+W + + +TL H D V ++ F + +++ S D+ +R+W+ + K ++ H+
Sbjct: 78 KVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHN 137
Query: 237 GAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLEK 275
V S D I +WD L K
Sbjct: 138 -----HFVMCAQFHPTDDLIVSASLDETIRIWDISGLRK 171
>Hs7657381 [R] KOG0289 mRNA splicing factor
Length = 504
Score = 55.5 bits (132), Expect = 3e-07
Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 35/169 (20%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPE-----------------------D 126
+GHT +V F P D +V S S D I IW +P D
Sbjct: 261 KGHTKKVTSVVFHPSQD-LVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGD 319
Query: 127 YGLHEYVDEEGNPKDLKPVRML-------SGHSRKVGHLLFHPLAENILASSSLDYTVKI 179
Y L D+ D++ R+L SG S FHP I + ++D +KI
Sbjct: 320 YLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQ--FHPDGL-IFGTGTMDSQIKI 376
Query: 180 WDISQE-EVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEK 227
WD+ + V H +TS++FS +G +L T + D +++WD+R K
Sbjct: 377 WDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLK 425
Score = 50.8 bits (120), Expect = 7e-06
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEE-VKFTLKHPDMVTSMSFSYDG 206
L GH++KV ++FHP +++++ S+S D T++IW + V+ H VT +S G
Sbjct: 260 LKGHTKKVTSVVFHP-SQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATG 318
Query: 207 KHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIG 266
+L++ S D+ D++ +++++ + + + TG D QI
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTG---TMDSQIK 375
Query: 267 VWDAFNLEKGNLGGF 281
+WD E+ N+ F
Sbjct: 376 IWDL--KERTNVANF 388
>Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 569
Score = 55.5 bits (132), Expect = 3e-07
Identities = 58/219 (26%), Positives = 93/219 (41%), Gaps = 39/219 (17%)
Query: 104 FNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPL 163
++D + SG D I IW+ L+ R+L+GH+ G +L
Sbjct: 275 YDDQKIVSGLRDNTIKIWD----------------KNTLECKRILTGHT---GSVLCLQY 315
Query: 164 AENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDV 223
E ++ + S D TV++WD++ E+ TL H + ++ +VT S+D+ + VWD+
Sbjct: 316 DERVIITGSSDSTVRVWDVNTGEMLNTLIH-HCEAVLHLRFNNGMMVTCSKDRSIAVWDM 374
Query: 224 RAEKIVSEG---PAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLE-KGNLG 279
+ ++ H A N VV D V+ +G DR I VW+ E L
Sbjct: 375 ASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASG-----DRTIKVWNTSTCEFVRTLN 427
Query: 280 GFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQ 318
G GI Y D L V+G D IR ++ +
Sbjct: 428 G-----HKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 458
Score = 53.9 bits (128), Expect = 8e-07
Identities = 51/186 (27%), Positives = 80/186 (42%), Gaps = 29/186 (15%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH A V DF +D + S S D I +W N + VR L+G
Sbjct: 388 GHRAAVNVVDF---DDKYIVSASGDRTIKVW----------------NTSTCEFVRTLNG 428
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
H R + L + + ++ S S D T+++WDI L+ H ++V + F D K +
Sbjct: 429 HKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 483
Query: 210 VTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS---DRQIG 266
V+ + D K++VWD+ A + PA + V G ++ F +S D I
Sbjct: 484 VSGAYDGKIKVWDLVA-ALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTIL 542
Query: 267 VWDAFN 272
+WD N
Sbjct: 543 IWDFLN 548
>Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 605
Score = 55.5 bits (132), Expect = 3e-07
Identities = 58/219 (26%), Positives = 93/219 (41%), Gaps = 39/219 (17%)
Query: 104 FNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPL 163
++D + SG D I IW+ L+ R+L+GH+ G +L
Sbjct: 311 YDDQKIVSGLRDNTIKIWD----------------KNTLECKRILTGHT---GSVLCLQY 351
Query: 164 AENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDV 223
E ++ + S D TV++WD++ E+ TL H + ++ +VT S+D+ + VWD+
Sbjct: 352 DERVIITGSSDSTVRVWDVNTGEMLNTLIH-HCEAVLHLRFNNGMMVTCSKDRSIAVWDM 410
Query: 224 RAEKIVSEG---PAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLE-KGNLG 279
+ ++ H A N VV D V+ +G DR I VW+ E L
Sbjct: 411 ASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASG-----DRTIKVWNTSTCEFVRTLN 463
Query: 280 GFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQ 318
G GI Y D L V+G D IR ++ +
Sbjct: 464 G-----HKRGIACLQYRDR---LVVSGSSDNTIRLWDIE 494
Score = 53.9 bits (128), Expect = 8e-07
Identities = 51/186 (27%), Positives = 80/186 (42%), Gaps = 29/186 (15%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH A V DF +D + S S D I +W N + VR L+G
Sbjct: 424 GHRAAVNVVDF---DDKYIVSASGDRTIKVW----------------NTSTCEFVRTLNG 464
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
H R + L + + ++ S S D T+++WDI L+ H ++V + F D K +
Sbjct: 465 HKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRI 519
Query: 210 VTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLS---DRQIG 266
V+ + D K++VWD+ A + PA + V G ++ F +S D I
Sbjct: 520 VSGAYDGKIKVWDLVA-ALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTIL 578
Query: 267 VWDAFN 272
+WD N
Sbjct: 579 IWDFLN 584
>At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 55.5 bits (132), Expect = 3e-07
Identities = 57/240 (23%), Positives = 102/240 (41%), Gaps = 49/240 (20%)
Query: 72 AVIPVKEVGKIPDQVPL---------FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWE 122
A + V + K P + PL RGH+++ +S F + SGSDD +I +W+
Sbjct: 148 AEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWD 207
Query: 123 I---PEDYGL---------------------HEYV-----DEE-------GNPKDLKPVR 146
I P++ L HEY+ D++ +P KPV+
Sbjct: 208 INATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQ 267
Query: 147 MLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL--KHPDMVTSMSFSY 204
+ HS +V L F+P E ++A+ S D TVK++D+ + H + V + ++
Sbjct: 268 SVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNP 327
Query: 205 DGKH-LVTVSRDKKLRVWDV-RAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSD 262
+ L + ++L VWD+ R ++ + A G + G T K++ ++ D
Sbjct: 328 KNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCED 387
>7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 510
Score = 55.5 bits (132), Expect = 3e-07
Identities = 56/216 (25%), Positives = 93/216 (42%), Gaps = 33/216 (15%)
Query: 104 FNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPL 163
++D + SG D I IW+ DL+ V+ L GH+ G +L
Sbjct: 218 YDDGKIVSGLRDNTIKIWD----------------RTDLQCVKTLMGHT---GSVLCLQY 258
Query: 164 AENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDV 223
+ ++ S S D TV++WD++ E+ TL H + ++ +VT S+D+ + VWD+
Sbjct: 259 DDKVIISGSSDSTVRVWDVNTGEMVNTLIH-HCEAVLHLRFNNGMMVTCSKDRSIAVWDM 317
Query: 224 RAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLE-KGNLGGFY 282
+ ++ G ++ V + D D+ S DR I VW + E L G
Sbjct: 318 TSPSEITLRRVLVG--HRAAVNVVDFDEKYIVSAS--GDRTIKVWSTSSCEFVRTLNG-- 371
Query: 283 NVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQ 318
GI Y D L V+G D +IR ++ +
Sbjct: 372 ---HKRGIACLQYRDR---LVVSGSSDNSIRLWDIE 401
>7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 860
Score = 55.5 bits (132), Expect = 3e-07
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 23/164 (14%)
Query: 108 IVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENI 167
+V + SDD I +W + + R+ GH+ V ++F+P N
Sbjct: 84 LVLTSSDDMLIKLWNWEKMWACQ---------------RVFEGHTHYVMQIVFNPKDNNT 128
Query: 168 LASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDG--KHLVTVSRDKKLRVWDVR 224
AS+SLD TVK+W + FTL+ H V + + + G +L++ + D+ +++WD +
Sbjct: 129 FASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ 188
Query: 225 AEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVW 268
+ V H A+N V + TG D + +W
Sbjct: 189 NKTCVQTLEGH--AQNISAVCFHPELPIVLTG---SEDGTVRIW 227
>CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 665
Score = 55.1 bits (131), Expect = 4e-07
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 32/175 (18%)
Query: 104 FNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPL 163
++D + SG D I IW+ KD R+LSGH+ G +L
Sbjct: 230 YDDDKIVSGLRDNTIKIWD----------------RKDYSCSRILSGHT---GSVLCLQY 270
Query: 164 AENILASSSLDYTVKIWDISQEE-VKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWD 222
++ S S D TV++WD+ E +K + H + V + F+ +VT S+D+ + VWD
Sbjct: 271 DNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWD 328
Query: 223 VRAEKIVSEG---PAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLE 274
+ + + ++ H A N VV D V+ +G DR I VW LE
Sbjct: 329 MVSPRDITIRRVLVGHRAAVN--VVDFDDRYIVSASG-----DRTIKVWSMDTLE 376
>At5g42010 [S] KOG0283 WD40 repeat-containing protein
Length = 709
Score = 55.1 bits (131), Expect = 4e-07
Identities = 55/204 (26%), Positives = 87/204 (41%), Gaps = 30/204 (14%)
Query: 72 AVIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHE 131
AV+P K FRGHT ++LD +S + S S D + +W +
Sbjct: 342 AVLPSKVFSISETPQHEFRGHTGEILDLSWS--EKGFLLSSSVDETVRLWRVGSS----- 394
Query: 132 YVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL 191
DE +R+ S H V + F+P+ +N S S+D V+IWD+SQ V
Sbjct: 395 --DE--------CIRVFS-HKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQFRVVDYT 443
Query: 192 KHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAK----NQRVV--- 244
+VT++ + DGK V S + R + ++ + K N+R+
Sbjct: 444 DIRQIVTALCYRPDGKGAVVGSMTGECRFYHTTDNQLQLDRDISLHGKKKVPNKRITGFQ 503
Query: 245 -WLGDTDKVATTGFSRLSDRQIGV 267
+ GD+DKV T +D QI +
Sbjct: 504 FFPGDSDKVMVTS----ADSQIRI 523
>7297305 [T] KOG0279 G protein beta subunit-like protein
Length = 318
Score = 55.1 bits (131), Expect = 4e-07
Identities = 55/216 (25%), Positives = 85/216 (38%), Gaps = 42/216 (19%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
F GHT VL FS N IV SGS D I +W + + E+G+ + VR
Sbjct: 102 FEGHTKDVLSVAFSADNRQIV-SGSRDKTIKLWNTLAECKFT--IQEDGHTDWVSCVRFS 158
Query: 149 SGHSR------------KVGHLLFHPLAEN------------------ILASSSLDYTVK 178
HS KV +L L N + S D
Sbjct: 159 PNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKAL 218
Query: 179 IWDISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSE------G 232
+WD++ + +TL+H D++ ++ FS ++ + V+ +++WD+ +K V E
Sbjct: 219 LWDLNDGKNLYTLEHNDIINALCFS-PNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVS 277
Query: 233 PAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVW 268
P + Q + TD T F+ SD I VW
Sbjct: 278 PTSKADQPQCLSLAWSTD--GQTLFAGYSDNTIRVW 311
Score = 53.1 bits (126), Expect = 1e-06
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH V +P + + S S D + +W++ D E+ N P + L G
Sbjct: 13 GHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRD--------EDTNYG--YPQKRLYG 62
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
HS + ++ N S S D T+++WD++ + + H V S++FS D + +
Sbjct: 63 HSHFISDVVLSSDG-NYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQI 121
Query: 210 VTVSRDKKLRVWDVRAE 226
V+ SRDK +++W+ AE
Sbjct: 122 VSGSRDKTIKLWNTLAE 138
>Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 54.7 bits (130), Expect = 5e-07
Identities = 43/149 (28%), Positives = 69/149 (45%), Gaps = 17/149 (11%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWE-IPEDYGLHEYVDEEGNPKDLK----- 143
RGH V D+ + SGS D + IW +P D + ++E N K
Sbjct: 186 RGHAGSV-DSIAVDGSGTKFCSGSWDKMLKIWSTVPTDE--EDEMEESTNRPRKKQKTEQ 242
Query: 144 ------PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMV 197
P+ LSGH V +L+ E + S+S D+T+++WD+ +K TL +
Sbjct: 243 LGLTRTPIVTLSGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVESGSLKSTLTGNKVF 300
Query: 198 TSMSFSYDGKHLVTVSRDKKLRVWDVRAE 226
+S+S K L + S D+ +R+WD R +
Sbjct: 301 NCISYSPLCKRLASGSTDRHIRLWDPRTK 329
>Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 54.7 bits (130), Expect = 5e-07
Identities = 43/149 (28%), Positives = 69/149 (45%), Gaps = 17/149 (11%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWE-IPEDYGLHEYVDEEGNPKDLK----- 143
RGH V D+ + SGS D + IW +P D + ++E N K
Sbjct: 186 RGHAGSV-DSIAVDGSGTKFCSGSWDKMLKIWSTVPTDE--EDEMEESTNRPRKKQKTEQ 242
Query: 144 ------PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMV 197
P+ LSGH V +L+ E + S+S D+T+++WD+ +K TL +
Sbjct: 243 LGLTRTPIVTLSGHMEAVSSVLWSDAEE--ICSASWDHTIRVWDVGSGSLKSTLTGNKVF 300
Query: 198 TSMSFSYDGKHLVTVSRDKKLRVWDVRAE 226
+S+S K L + S D+ +R+WD R +
Sbjct: 301 NCISYSPLCKRLASGSTDRHIRLWDPRTK 329
>At4g15900 [A] KOG0285 Pleiotropic regulator 1
Length = 486
Score = 54.7 bits (130), Expect = 5e-07
Identities = 78/331 (23%), Positives = 136/331 (40%), Gaps = 55/331 (16%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWE-------------IPEDYGL----- 129
+ +GH V F P N+ +GS D I IW+ I + GL
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWF-CTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 130 HEYVDEEGNPKDLK--------PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWD 181
H Y+ G+ K +K +R GH V L HP + +L + D ++WD
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLD-VLLTGGRDSVCRVWD 288
Query: 182 ISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKN 240
I + F L H + V S+ +VT S D ++ WD+R K +S H K+
Sbjct: 289 IRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHK--KS 346
Query: 241 QRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLEKGNLGGFYN-VDQSSGILMPFYDDSN 299
R + L + + + + + F+L KG +N + Q I+ + +
Sbjct: 347 VRAMTLHPKENAFASASADNTKK-------FSLPKGEF--CHNMLSQQKTIINAMAVNED 397
Query: 300 RILYVAGKGDGNIRYFEFQNDELYELSEY----QSTEPQRGFAVA-----PKRSVNVKEN 350
++ V G +G+I ++++++ ++ SE S E + G A R V + +
Sbjct: 398 GVM-VTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEAD 456
Query: 351 EVLKAYKAVGEHA---VEPISFYVPRKSEVF 378
+ +K +K E+A PI+F P++ F
Sbjct: 457 KTIKMWKE-DENATPETHPINFKPPKEIRRF 486
>SPBC244.03 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 796
Score = 54.3 bits (129), Expect = 6e-07
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 143 KPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSF 202
K V+ GHSR V L +P N ASS LD TVK+W FTL+ D +
Sbjct: 132 KCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQAHDRGVNYVN 191
Query: 203 SY---DGKHLVTVSRDKKLRVWDVRAEKIV 229
Y D +L+T D ++VWD + + V
Sbjct: 192 YYPAGDKPYLITAGDDNLIKVWDYQTKACV 221
>SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 431
Score = 54.3 bits (129), Expect = 6e-07
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 92 HTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGH 151
H QV D F + ++AS S D + + +I KP R + H
Sbjct: 233 HEKQVSDVRFHYKHQDLLASVSYDQYLHVHDIRRP------------DASTKPARSVHAH 280
Query: 152 SRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKF-TLK-HPDMVTSMSFS-YDGKH 208
S + + F+P + ILA+ S D T+ +WD+ + TL+ H D+VT +SFS ++
Sbjct: 281 SGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPI 340
Query: 209 LVTVSRDKKLRVWDVRAEKIVSEGPA 234
L + S D++ VWD+ +I + PA
Sbjct: 341 LASTSADRRTLVWDL--SRIGEDQPA 364
>Hs8923881 [R] KOG0266 WD40 repeat-containing protein
Length = 404
Score = 54.3 bits (129), Expect = 6e-07
Identities = 42/158 (26%), Positives = 70/158 (43%), Gaps = 23/158 (14%)
Query: 83 PDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDL 142
P L+ H QV D ++A+G +DG+I IWE+ L
Sbjct: 105 PPSRKLWARHHPQVPDVSCL-----VLATGLNDGQIKIWEVQTGLLLLN----------- 148
Query: 143 KPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ--EEVKFTLKHPDMVTSM 200
LSGH V L F P IL S+S D T++IWD+++ ++++ H V
Sbjct: 149 -----LSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCC 203
Query: 201 SFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGA 238
S S D L + + +K + +W +R+ ++ + H +
Sbjct: 204 SISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSS 241
>Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 54.3 bits (129), Expect = 6e-07
Identities = 39/136 (28%), Positives = 60/136 (43%), Gaps = 19/136 (13%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
F GH A + + + ASGS D I +W++ + GL+ L
Sbjct: 103 FNGHKAAITTLKYDQLGGRL-ASGSKDTDIIVWDVINESGLYR----------------L 145
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI-SQEEVKFTLKHPDMVTSMSFSYDGK 207
GH + LF +N+L +S D VK WD+ +Q K + H V + + K
Sbjct: 146 KGHKDAITQALFLR-EKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEK 204
Query: 208 HLVTVSRDKKLRVWDV 223
L+T + D +LRVWD+
Sbjct: 205 RLITGASDSELRVWDI 220
>CE11748 [R] KOG0266 WD40 repeat-containing protein
Length = 395
Score = 54.3 bits (129), Expect = 6e-07
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
V +GHT V F+P + ++ASGS D I IW GN +
Sbjct: 183 VKTLKGHTNYVFCCCFNP-SGTLIASGSFDETIRIW-----------CARNGNT-----I 225
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL---KHPDMVTSMSF 202
+ GH V + F+ LAS S D V+IWD + TL +HP +T + F
Sbjct: 226 FSIPGHEDPVSSVCFNRDGA-YLASGSYDGIVRIWDSTTGTCVKTLIDEEHPP-ITHVKF 283
Query: 203 SYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAK 239
S +GK+++ + + L++WD + +++ E H +K
Sbjct: 284 SPNGKYILASNLNNTLKLWDYQKLRVLKEYTGHENSK 320
>7303130 [R] KOG0645 WD40 repeat protein
Length = 335
Score = 54.3 bits (129), Expect = 6e-07
Identities = 51/175 (29%), Positives = 77/175 (43%), Gaps = 24/175 (13%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
+GH ++ + P ++ AS +D I IW + GN K + +
Sbjct: 11 QGHKGRIWGVAWHP-KGNVFASCGEDKAIRIWSLT------------GNTWSTKTI-LSD 56
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKF--TLK-HPDMVTSMSFSYDG 206
GH R + + + P + LAS+S D T IW S E + TL+ H + V S+S+S G
Sbjct: 57 GHKRTIREIRWSPCGQ-YLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSG 115
Query: 207 KHLVTVSRDKKLRVWDVRA----EKIVSEGPAHSGAKNQRVVWLGDTDKVATTGF 257
L T SRDK + +W+V E P K RVVW D +A+ +
Sbjct: 116 GLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVK--RVVWHPTKDILASASY 168
Score = 51.6 bits (122), Expect = 4e-06
Identities = 47/195 (24%), Positives = 84/195 (42%), Gaps = 31/195 (15%)
Query: 42 ITSNAWDSNLIKCNGKYISVN---WNSSGG-------GAFAVIPVKEVGKIPDQVPLFRG 91
+T N W + I +G ++ W+ G A I K G+ L G
Sbjct: 43 LTGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATL-EG 101
Query: 92 HTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGH 151
H +V +S + ++A+ S D + IWE+ D + + +L+ H
Sbjct: 102 HENEVKSVSWSR-SGGLLATCSRDKSVWIWEVAGD-------------DEFECAAVLNPH 147
Query: 152 SRKVGHLLFHPLAENILASSSLDYTVKIW-----DISQEEVKFTLKHPDMVTSMSFSYDG 206
++ V +++HP ++ILAS+S D T+K++ D + H V + F DG
Sbjct: 148 TQDVKRVVWHP-TKDILASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADG 206
Query: 207 KHLVTVSRDKKLRVW 221
+ LV+ S D +++W
Sbjct: 207 ERLVSCSDDTTIKIW 221
>YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 640
Score = 53.9 bits (128), Expect = 8e-07
Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 25/138 (18%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
F+GH VL F N ++ +GS D IGIW++ K +R L
Sbjct: 298 FKGHMDGVLTLQF---NYRLLFTGSYDSTIGIWDLFTG----------------KLIRRL 338
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWD-ISQEEVKFTLKHPDMVTSMSFSYDGK 207
SGHS V L F + L + SLD T+++W+ I+ E + H D V S+ SY K
Sbjct: 339 SGHSDGVKTLYFD---DRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVD-SYQ-K 393
Query: 208 HLVTVSRDKKLRVWDVRA 225
+V+ S DK ++VW V +
Sbjct: 394 VIVSGSADKTVKVWHVES 411
>CE29136 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1232
Score = 53.9 bits (128), Expect = 8e-07
Identities = 45/157 (28%), Positives = 70/157 (43%), Gaps = 19/157 (12%)
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEI-------------PEDYGLH 130
+ + + GH V+ F P D +VAS S D + +W+I P
Sbjct: 128 NSIAILTGHNHYVMCAQFHPTED-LVASASLDQTVRVWDISGLRKKQMPGGGAPSRPTGG 186
Query: 131 EYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQE---EV 187
+ + G P D +L GH R V + FH IL S S D VKIW ++ E+
Sbjct: 187 QQAELFGQP-DAVVKHVLEGHDRGVNWVAFHH-TNPILVSGSDDRQVKIWRYNETKAWEL 244
Query: 188 KFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVR 224
H + V+S+ F + +++ S DK +RVWD++
Sbjct: 245 DSCRGHYNNVSSVIFHPNADLILSNSEDKSIRVWDMQ 281
>SPAC3H5.08c [S] KOG0283 WD40 repeat-containing protein
Length = 855
Score = 53.5 bits (127), Expect = 1e-06
Identities = 47/191 (24%), Positives = 79/191 (40%), Gaps = 42/191 (21%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM- 147
+ GHTA +LD +S ++ + S S D +W PVR
Sbjct: 305 YAGHTADILDLSWS--RNNFLLSSSMDKTARLWH---------------------PVRKD 341
Query: 148 ---LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSY 204
HS V + FHP + S SLD +++W I ++ V F + P+++T+++FS
Sbjct: 342 CLCCFEHSDFVTSIAFHPKDDRFFLSGSLDCKLRLWSIKEKAVSFWNELPELITAVAFSP 401
Query: 205 DGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHS----GAKNQRVVWL-----------GDT 249
DG + + +D R + ++ S AK +V + GDT
Sbjct: 402 DGGLAIAGTFVGLCLFYDTRGLRFRTQMSIRSSRGKNAKGSKVTGIQTRTQMIDNIAGDT 461
Query: 250 DKVATTGFSRL 260
+ + TT SR+
Sbjct: 462 EMLVTTNDSRI 472
>Hs9257257 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 606
Score = 53.5 bits (127), Expect = 1e-06
Identities = 57/238 (23%), Positives = 95/238 (38%), Gaps = 33/238 (13%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH + D + +A+GSDD +E P K +
Sbjct: 144 GHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPP----------------FKFKFTIGD 187
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL----KHPDMVTSMSFSYDG 206
HSR V + F P N A++S D + I+D E L H + ++S+S D
Sbjct: 188 HSRFVNCVRFSPDG-NRFATASADGQIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDS 246
Query: 207 KHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTD---KVATTGFSRLSDR 263
HL++ S DK ++WDV +VS P S +Q++ L D V+ +G+ DR
Sbjct: 247 THLLSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQLGCLWQKDHLLSVSLSGYINYLDR 306
Query: 264 QIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQNDE 321
++ KG+ S + + + + +G DG+I Y++ + E
Sbjct: 307 N-NPSKPLHVIKGH--------SKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGE 355
>Hs4827056 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 534
Score = 53.5 bits (127), Expect = 1e-06
Identities = 57/238 (23%), Positives = 95/238 (38%), Gaps = 33/238 (13%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH + D + +A+GSDD +E P K +
Sbjct: 144 GHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPP----------------FKFKFTIGD 187
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL----KHPDMVTSMSFSYDG 206
HSR V + F P N A++S D + I+D E L H + ++S+S D
Sbjct: 188 HSRFVNCVRFSPDG-NRFATASADGQIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDS 246
Query: 207 KHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTD---KVATTGFSRLSDR 263
HL++ S DK ++WDV +VS P S +Q++ L D V+ +G+ DR
Sbjct: 247 THLLSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQLGCLWQKDHLLSVSLSGYINYLDR 306
Query: 264 QIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQNDE 321
++ KG+ S + + + + +G DG+I Y++ + E
Sbjct: 307 N-NPSKPLHVIKGH--------SKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGE 355
>Hs4557491 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 431
Score = 53.5 bits (127), Expect = 1e-06
Identities = 39/128 (30%), Positives = 67/128 (51%), Gaps = 15/128 (11%)
Query: 108 IVASGSDDGKIGIWE---------IPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHL 158
++A+GS D I I + +P + ++E + N ++ +R L H +V L
Sbjct: 122 LIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQ--NMENHPVIRTLYDHVDEVTCL 179
Query: 159 LFHPLAENILASSSLDYTVKIWDISQEEVKFTLKH---PDMVTSMSFSYDGKHLVTVSRD 215
FHP E ILAS S DYT+K++D S+ K K+ +M+ S+SF G ++ ++
Sbjct: 180 AFHP-TEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQH 238
Query: 216 KKLRVWDV 223
LR++D+
Sbjct: 239 PTLRLYDI 246
>Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 1336
Score = 53.5 bits (127), Expect = 1e-06
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 21/144 (14%)
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
+ V +F+ H + + FSP D+ A+ SDDG + IW+ HE
Sbjct: 193 NNVKMFQAHKEAIREASFSP-TDNKFATCSDDGTVRIWDFLR---CHEE----------- 237
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLD--YTVKIWDISQEEVKFTLK-HPDMVTSM 200
R+L GH V + +HP + ++ S S D +K WD + TL H + V +
Sbjct: 238 --RILRGHGADVKCVDWHP-TKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEV 294
Query: 201 SFSYDGKHLVTVSRDKKLRVWDVR 224
+ +G L+T SRD +++D+R
Sbjct: 295 KLNLNGNWLLTASRDHLCKLFDIR 318
>Hs11321585 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 53.5 bits (127), Expect = 1e-06
Identities = 48/193 (24%), Positives = 78/193 (39%), Gaps = 39/193 (20%)
Query: 85 QVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKP 144
Q F GHT V+ +P + + SG+ D +W++ E +
Sbjct: 176 QTTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTF------------ 222
Query: 145 VRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMV---TSMS 201
+GH + + F P N A+ S D T +++D+ ++ T H +++ TS+S
Sbjct: 223 ----TGHESDINAICFFPNG-NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 202 FSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTD---KVATTGFS 258
FS G+ L+ D VWD + ++ + RV LG TD VAT
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDA----LKADRAGVLAGHDNRVSCLGVTDDGMAVAT---- 329
Query: 259 RLSDRQIGVWDAF 271
G WD+F
Sbjct: 330 -------GSWDSF 335
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 53.5 bits (127), Expect = 1e-06
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 24/183 (13%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GHT + FSP ++ S +D + IW + D+ + E R L+G
Sbjct: 85 GHTKSISSAKFSPCGKYLGTSSADK-TVKIWNM--DHMICE--------------RTLTG 127
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL 209
H V + + + ++++S D T+KI++I + TLK H + V +F+ +
Sbjct: 128 HKLGVNDIAWSSDSRCVVSASD-DKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV 186
Query: 210 VTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
V+ S D+ +R+WDV+ + PAHS + V + D +A+ + D + +WD
Sbjct: 187 VSGSFDESVRIWDVKTGMCIKTLPAHSDPVS-AVSFNRDGSLIASGSY----DGLVRIWD 241
Query: 270 AFN 272
N
Sbjct: 242 TAN 244
Score = 53.5 bits (127), Expect = 1e-06
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
+GH V +F+P +V SGS D + IW++ K ++ L
Sbjct: 168 KGHNNYVFCCNFNP-QSSLVVSGSFDESVRIWDV----------------KTGMCIKTLP 210
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDM--VTSMSFSYDGK 207
HS V + F+ +++AS S D V+IWD + + TL + V + FS +GK
Sbjct: 211 AHSDPVSAVSFNRDG-SLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGK 269
Query: 208 HLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAK 239
+++ + D L++WD K + + H +K
Sbjct: 270 YILASNLDSTLKLWDFSKGKTLKQYTGHENSK 301
>At5g53500 [S] KOG0283 WD40 repeat-containing protein
Length = 654
Score = 53.5 bits (127), Expect = 1e-06
Identities = 42/179 (23%), Positives = 79/179 (43%), Gaps = 19/179 (10%)
Query: 57 KYISVNWNSSGGGAFAVIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDG 116
K + ++ + A V P K + + FRGHT +VLD +S D+ + S S D
Sbjct: 292 KKTTESFRKTSDSACVVFPPKVFRIMEKPLYEFRGHTGEVLDISWS--KDNYLLSASMDK 349
Query: 117 KIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYT 176
+ +W++ + L + H+ V + F+P+ EN S S+D
Sbjct: 350 TVRLWKVGSNDCLGVFA-----------------HNSYVTSVQFNPVNENYFMSGSIDGK 392
Query: 177 VKIWDISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAH 235
V+IW+IS V D+++++ + DG+ + S + R +++ E + + H
Sbjct: 393 VRIWNISGCSVVDWADLKDIISAVCYRPDGQGGIIGSLNGSCRFFNMSGEFLELDSQIH 451
>At5g50230 [R] KOG0288 WD40 repeat protein TipD
Length = 515
Score = 53.5 bits (127), Expect = 1e-06
Identities = 52/242 (21%), Positives = 100/242 (40%), Gaps = 25/242 (10%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
G +LD + N ++A+ S + + +W++ H L+G
Sbjct: 271 GSLGNILDMAVTHDNKSVIAATSSNN-LFVWDVSSGRVRHT----------------LTG 313
Query: 151 HSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSYDGKHLV 210
H+ KV + + + S++ D T+K+WD+ + T+ ++ S DG +
Sbjct: 314 HTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLSIDGLTVF 373
Query: 211 TVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDA 270
+ D LR+WD++ K++SE HS A V + +++ T+G D V+D
Sbjct: 374 SGHMDGNLRLWDIQTGKLLSEVAGHSSAVTS-VSLSRNGNRILTSG----RDNVHNVFDT 428
Query: 271 FNLE-KGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQNDELYELSEYQ 329
LE G L N S+ D + + AG DG++ + + + + Q
Sbjct: 429 RTLEICGTLRASGNRLASNWSRSCISPDDDYV--AAGSADGSVHVWSLSKGNIVSILKEQ 486
Query: 330 ST 331
++
Sbjct: 487 TS 488
>YPL151c [A] KOG0285 Pleiotropic regulator 1
Length = 451
Score = 53.1 bits (126), Expect = 1e-06
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 93 TAQVLDTDFSPFNDHIVASGSDD-------GKIGIWEIPEDYGLHEYVDEEGNPKDL--- 142
T Q + TDFS + +++ D KI E+ E+ ++ Y +
Sbjct: 69 TLQHVPTDFSEASQAVISKKDHDTHASAFVNKIFQPEVAEELIVNRYEKLLSQRPEWHAP 128
Query: 143 -KPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSM 200
K R+++GH V + P+ + S D T+K+WD++ ++K TL H V +
Sbjct: 129 WKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDV 188
Query: 201 SFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDT-DKVATTGFSR 259
+ S +L +VS DK ++ WD+ +I+ + H R V + T D +AT G
Sbjct: 189 AVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGH--LSGVRTVSIHPTLDLIATAG--- 243
Query: 260 LSDRQIGVWD 269
D I +WD
Sbjct: 244 -RDSVIKLWD 252
>SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 775
Score = 53.1 bits (126), Expect = 1e-06
Identities = 40/146 (27%), Positives = 73/146 (49%), Gaps = 25/146 (17%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
+ RGH +V +P +++G+D KI IW + E G + ++
Sbjct: 612 VLRGHVGRVYSVTINPSRQQCISAGTD-AKIRIWNL-----------ESG-----ELLQT 654
Query: 148 LSGHSRKVGHLLFHPLAENILASSSL--DYTVKIWDISQEEVKFTLKHPDMVTSMSFSYD 205
L GHS V + F+ +NIL S+S D ++++WD++ + LK P + + F +D
Sbjct: 655 LHGHSNLVSQVTFN---QNILVSASAPPDTSLRVWDLNTGSCRDILKCP--LGHIFFQHD 709
Query: 206 GKHLVTVSRDKKLRVWDVRAEKIVSE 231
+V+ S L++WD+R+ K+V +
Sbjct: 710 ESKVVSGSHST-LQLWDIRSGKLVRD 734
>Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 522
Score = 53.1 bits (126), Expect = 1e-06
Identities = 38/144 (26%), Positives = 65/144 (44%), Gaps = 25/144 (17%)
Query: 101 FSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLF 160
FSP N ++A+ G +W +P+ LH L GH+ VG ++F
Sbjct: 239 FSP-NSKMLATACWSGLCKLWSVPDCNLLHT----------------LRGHNTNVGAIVF 281
Query: 161 HPLA-------ENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTV 212
HP + + LAS + D +VK+W + +E ++ H V + + G+ L T
Sbjct: 282 HPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 341
Query: 213 SRDKKLRVWDVRAEKIVSEGPAHS 236
D+ R+WD+ A++ + HS
Sbjct: 342 CYDRSWRLWDLEAQEEILHQEGHS 365
Score = 52.0 bits (123), Expect = 3e-06
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 18/137 (13%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
+ GH ++ +FSP N + +A+GS D +W++ + + V
Sbjct: 400 IMFLEGHLKEIYGINFSP-NGYHIATGSGDNTCKVWDL----------------RQRRCV 442
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIW-DISQEEVKFTLKHPDMVTSMSFSY 204
+ H V + F P+ N L + + D T KIW +K H V + S
Sbjct: 443 YTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISS 502
Query: 205 DGKHLVTVSRDKKLRVW 221
DG+ + T S D+ ++W
Sbjct: 503 DGQLIATCSYDRTFKLW 519
Score = 52.0 bits (123), Expect = 3e-06
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 90 RGHTAQVLDTDFSPFN-------DHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDL 142
RGH V F P + D +AS + DG + +W + D
Sbjct: 270 RGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSD---------------- 313
Query: 143 KPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI-SQEEVKFTLKHPDMVTSMS 201
+PV + GH+ +V +++HP + L ++ D + ++WD+ +QEE+ H V ++
Sbjct: 314 EPVADIEGHTVRVARVMWHP-SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIA 372
Query: 202 FSYDGKHLVTVSRDKKLRVWDVRAEKIV 229
F DG T D RVWD+R + +
Sbjct: 373 FHQDGSLAGTGGLDAFGRVWDLRTGRCI 400
>Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 906
Score = 52.8 bits (125), Expect = 2e-06
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 84 DQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
++V +F H+ + P I+ S SDD I +W+ + + +
Sbjct: 90 ERVHMFEAHSDYIRCIAVHPTQPFILTS-SDDMLIKLWDWDKKWSCSQ------------ 136
Query: 144 PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSF 202
+ GH+ V ++ +P N AS+SLD T+K+W + FTL+ H V + +
Sbjct: 137 ---VFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY 193
Query: 203 --SYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHS 236
D +L++ + D+ +++WD + + V H+
Sbjct: 194 YSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHA 229
>Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 323
Score = 52.8 bits (125), Expect = 2e-06
Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 37/188 (19%)
Query: 42 ITSNAWDSNLIKC----NGKYISVNWNSSGGGAFAVIPVKEVGKIPDQVPLFRGHTAQVL 97
I S W ++ C +G W+ G VIP H A++L
Sbjct: 158 IYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVIPA---------------HQAEIL 202
Query: 98 DTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGH 157
D+ +N++++ +G+ D + W++ +PV L GH+ +
Sbjct: 203 SCDWCKYNENLLVTGAVDCSLRGWDLRNVR---------------QPVFELLGHTYAIRR 247
Query: 158 LLFHPLAENILASSSLDYTVKIWDISQEE--VKFTLKHPDMVTSMSFSYDG-KHLVTVSR 214
+ F P ++LAS S D+TV+ W+ S+ + ++ H + + FS + S
Sbjct: 248 VKFSPFHASVLASCSYDFTVRFWNFSKPDSLLETVEHHTEFTCGLDFSLQSPTQVADCSW 307
Query: 215 DKKLRVWD 222
D+ ++++D
Sbjct: 308 DETIKIYD 315
Score = 52.4 bits (124), Expect = 2e-06
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 62 NWNSSGGGAFAVIPVKEVGKIPDQVPLFRGHTAQ--VLDTDFSPFNDHIVASGSDDGKIG 119
++ +G G ++ E G + LFR + D +S N+H++ + S DG +
Sbjct: 39 HYGIAGCGTLLILDPDEAG-----LRLFRSFDWNDGLFDVTWSENNEHVLITCSGDGSLQ 93
Query: 120 IWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPL-AENILASSSLDYTVK 178
+W+ + G P+++ H+++V + + E ++ S S D TVK
Sbjct: 94 LWDTAKAAG---------------PLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVK 138
Query: 179 IWDISQEEVKFTLK-HPDMVTSMSFSYDGKHL----VTVSRDKKLRVWDVRAEKIVSEGP 233
+WD + + T + H ++ S +S H+ + S D+ LR+WDV+A + P
Sbjct: 139 LWDPTVGKSLCTFRGHESIIYSTIWS---PHIPGCFASASGDQTLRIWDVKAAGVRIVIP 195
Query: 234 AHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLEK 275
AH A+ W + + TG D + WD N+ +
Sbjct: 196 AHQ-AEILSCDWCKYNENLLVTG---AVDCSLRGWDLRNVRQ 233
>Hs22059675 [S] KOG0283 WD40 repeat-containing protein
Length = 913
Score = 52.8 bits (125), Expect = 2e-06
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 128 GLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEV 187
G E D++ P +P GH+ + L + L SSS+D TV++W IS+ E
Sbjct: 583 GTDEDPDDKNAPFRQRPFCKYKGHTADLLDLSWSK--NYFLLSSSMDKTVRLWHISRREC 640
Query: 188 KFTLKHPDMVTSMSF-SYDGKHLVTVSRDKKLRVWDVRAEKI 228
+H D VT+++F D ++ ++ S D KLR+W++ +K+
Sbjct: 641 LCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKV 682
>At2g37670 [S] KOG0283 WD40 repeat-containing protein
Length = 903
Score = 52.8 bits (125), Expect = 2e-06
Identities = 31/94 (32%), Positives = 47/94 (49%), Gaps = 3/94 (3%)
Query: 143 KPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSF 202
KPV L GH + L + +L SSS+D TV++WDI + H D VT + F
Sbjct: 497 KPVCSLKGHLDAILDLSWSK--SQLLLSSSMDKTVRLWDIETKTCLKLFAHNDYVTCIQF 554
Query: 203 S-YDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAH 235
S D + ++ S D K+R+W ++ +V H
Sbjct: 555 SPVDENYFLSGSLDAKIRIWSIQDRHVVEWSDLH 588
>HsM6005894_2 [R] KOG4155 FOG: WD40 repeat
Length = 1191
Score = 52.8 bits (125), Expect = 2e-06
Identities = 64/269 (23%), Positives = 108/269 (39%), Gaps = 45/269 (16%)
Query: 90 RGHTAQVLDTDFSPF---NDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVR 146
+G Q LD S + ++ SG++DG + W + E L+ +
Sbjct: 525 QGAQGQALDVAVSALAWLSPKVLVSGAEDGSLQGWALKEC--------------SLQSLW 570
Query: 147 MLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDIS-------QEEVKFTLK---HPDM 196
+LS + V L ++ +LAS+S D+TV++W E+ + H
Sbjct: 571 LLSRFQKPVLGLA---TSQELLASASEDFTVQLWPRQLLTRPHKAEDFPCGTELRGHEGP 627
Query: 197 VTSMSFSYDGKHLVTVSRDKKLRVWDVRAEK---IVSEGPAHSGAKNQRVVWLGDTDKVA 253
V+ SFS DG L T RD+ L WDVR K ++ PA W D ++
Sbjct: 628 VSCCSFSTDGGSLATGGRDRSLLCWDVRTPKTPVLIHSFPACHRDWVTGCAWTKDNLLIS 687
Query: 254 TTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIR 313
+ SD +G+WD E G G + QS+ + ++ V+ DG ++
Sbjct: 688 CS-----SDGSVGLWDP---ESGQRLGQFLGHQSAVSAVAAVEEH----VVSVSRDGTLK 735
Query: 314 YFEFQNDELYELSEYQSTEPQRGFAVAPK 342
++ Q EL + + A+ P+
Sbjct: 736 VWDHQGVELTSIPAHSGPISHCAAAMEPR 764
>Hs21536371_2 [R] KOG4155 FOG: WD40 repeat
Length = 1191
Score = 52.8 bits (125), Expect = 2e-06
Identities = 64/269 (23%), Positives = 108/269 (39%), Gaps = 45/269 (16%)
Query: 90 RGHTAQVLDTDFSPF---NDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVR 146
+G Q LD S + ++ SG++DG + W + E L+ +
Sbjct: 525 QGAQGQALDVAVSALAWLSPKVLVSGAEDGSLQGWALKEC--------------SLQSLW 570
Query: 147 MLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDIS-------QEEVKFTLK---HPDM 196
+LS + V L ++ +LAS+S D+TV++W E+ + H
Sbjct: 571 LLSRFQKPVLGLA---TSQELLASASEDFTVQLWPRQLLTRPHKAEDFPCGTELRGHEGP 627
Query: 197 VTSMSFSYDGKHLVTVSRDKKLRVWDVRAEK---IVSEGPAHSGAKNQRVVWLGDTDKVA 253
V+ SFS DG L T RD+ L WDVR K ++ PA W D ++
Sbjct: 628 VSCCSFSTDGGSLATGGRDRSLLCWDVRTPKTPVLIHSFPACHRDWVTGCAWTKDNLLIS 687
Query: 254 TTGFSRLSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIR 313
+ SD +G+WD E G G + QS+ + ++ V+ DG ++
Sbjct: 688 CS-----SDGSVGLWDP---ESGQRLGQFLGHQSAVSAVAAVEEH----VVSVSRDGTLK 735
Query: 314 YFEFQNDELYELSEYQSTEPQRGFAVAPK 342
++ Q EL + + A+ P+
Sbjct: 736 VWDHQGVELTSIPAHSGPISHCAAAMEPR 764
>YGL137w [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 889
Score = 52.4 bits (124), Expect = 2e-06
Identities = 44/185 (23%), Positives = 73/185 (38%), Gaps = 23/185 (12%)
Query: 56 GKYIS-VNWNSSGGGAFAVIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSD 114
GK+I+ NW G F + ++V F H + P +++ SGSD
Sbjct: 61 GKFIARKNWIIVGSDDFRIRVFNY--NTGEKVVDFEAHPDYIRSIAVHPTKPYVL-SGSD 117
Query: 115 DGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLD 174
D + +W ++ L + + GH V + F+P + AS LD
Sbjct: 118 DLTVKLWNWENNWALEQTFE---------------GHEHFVMCVAFNPKDPSTFASGCLD 162
Query: 175 YTVKIWDISQEEVKFTLKHPDMVTSMSFSY----DGKHLVTVSRDKKLRVWDVRAEKIVS 230
TVK+W + Q FTL Y D +++T S D +++WD + + V+
Sbjct: 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVA 222
Query: 231 EGPAH 235
H
Sbjct: 223 TLEGH 227
>SPAC31A2.14 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 962
Score = 52.4 bits (124), Expect = 2e-06
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 108 IVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENI 167
+VASG D +I +W DY + + V + L ++ G V L + NI
Sbjct: 139 LVASGGLDKRIIVW----DYNVGQEVMRF---EQLPDCSLVVGPRSGVYSLAAN---NNI 188
Query: 168 LASSSLDYTVKIWD-ISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAE 226
+A+ L +++WD +S++ + + H D V + S DG+ ++T S D +++W +RA+
Sbjct: 189 IANGGLQKDIQLWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASSDATIKLWSLRAQ 248
Query: 227 KIVSEGPAHS 236
K + AHS
Sbjct: 249 KCLFSFIAHS 258
>Hs5174447 [T] KOG0279 G protein beta subunit-like protein
Length = 317
Score = 52.4 bits (124), Expect = 2e-06
Identities = 38/137 (27%), Positives = 65/137 (46%), Gaps = 19/137 (13%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPED---YGLHEYVDEEGNPKDLKPVR 146
+GH V +P ++ S S D I +W++ D YG+ P R
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGI--------------PQR 57
Query: 147 MLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ-EEVKFTLKHPDMVTSMSFSYD 205
L GHS V ++ + L S S D T+++WD++ + + H V S++FS D
Sbjct: 58 ALRGHSHFVSDVVISSDGQFAL-SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 206 GKHLVTVSRDKKLRVWD 222
+ +V+ SRDK +++W+
Sbjct: 117 NRQIVSGSRDKTIKLWN 133
>Hs22046076 [R] KOG0266 WD40 repeat-containing protein
Length = 177
Score = 52.4 bits (124), Expect = 2e-06
Identities = 41/144 (28%), Positives = 64/144 (43%), Gaps = 23/144 (15%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV-- 145
L GH + +DFSP + +A+GS D + IW++ + + P
Sbjct: 4 LLVGHRDSIQSSDFSP-TVNCLATGSWDSTVHIWDL----------------RMVTPAVS 46
Query: 146 -RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFS 203
+ L GHS + L + A +LAS S D T+ IW + + LK H V S++FS
Sbjct: 47 HQALEGHSANISCLCYS--ASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFS 104
Query: 204 YDGKHLVTVSRDKKLRVWDVRAEK 227
D L + + ++VWD K
Sbjct: 105 PDELWLASAGYSRMVKVWDCNTGK 128
>Hs20149592 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 350
Score = 52.4 bits (124), Expect = 2e-06
Identities = 49/190 (25%), Positives = 83/190 (42%), Gaps = 29/190 (15%)
Query: 85 QVPLF-RGHTAQVLDTDFSPFNDH--IVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKD 141
Q PL GHT V+D FS + + S DGK + +G+ D
Sbjct: 5 QTPLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPML--------------RQGDTGD 50
Query: 142 LKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMS 201
+ GH V + A A+++ D+T K+WD + TL H +V ++
Sbjct: 51 W--IGTFLGHKGAVWGATLNKDATKA-ATAAADFTAKVWDAVSGDELMTLAHKHIVKTVD 107
Query: 202 FSYDGKHLVTVSRDKKLRVWDV-RAEKIVSEGPAH-SGAKNQRVVWLGDTDKVATTGFSR 259
F+ D +L+T +DK LR++D+ + E E H SG K + +W + ++ +
Sbjct: 108 FTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIK--KALWCSEDKQILSA---- 161
Query: 260 LSDRQIGVWD 269
D+ + +WD
Sbjct: 162 -DDKTVRLWD 170
>At3g44530 [DK] KOG0973 Histone transcription regulator HIRA WD repeat
superfamily
Length = 1051
Score = 52.4 bits (124), Expect = 2e-06
Identities = 40/119 (33%), Positives = 60/119 (49%), Gaps = 3/119 (2%)
Query: 105 NDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEG-NPKDLKPVRMLSGHSRKVGHLLFHPL 163
N VASGSDD I I E G E+ E + ++ K V L GH+ V L + P
Sbjct: 70 NSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSP- 128
Query: 164 AENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKKLRVW 221
+++LAS SLD TV IW++ L+ H +V +++ G + + S DK + +W
Sbjct: 129 DDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIW 187
>At1g24530 [R] KOG4155 FOG: WD40 repeat
Length = 418
Score = 52.4 bits (124), Expect = 2e-06
Identities = 68/269 (25%), Positives = 112/269 (41%), Gaps = 43/269 (15%)
Query: 104 FNDHIVASGSDDGKIGIWEIPEDYG---------LHEYVDEEGNPKDLKPVR-----MLS 149
F+ + + DGKIG+W++ G L++ + PK+ VR +
Sbjct: 133 FSGEKIFTAHQDGKIGVWKLTAKSGYKQLTTLPTLNDRLRRFALPKNYVQVRRHKKRLWI 192
Query: 150 GHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKH 208
H+ V L +++ + S S D T+KIW S K ++K H D V +++ S +G
Sbjct: 193 EHADAVTALA---VSDGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGT- 248
Query: 209 LVTVSRDKKLRVW----DVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQ 264
+ T S D+++RVW + +V+ H A N + L D V FS DR
Sbjct: 249 VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVN--ALALNDDGSVL---FSGSCDRS 303
Query: 265 IGVWDA-----FNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQN 319
I VW+ + +G L G IL F L ++G D +R +
Sbjct: 304 ILVWEREDTSNYMAVRGALRG-----HDKAILSLFNVSD---LLLSGSADRTVRIWRRGP 355
Query: 320 DELYELSEYQS--TEPQRGFAVAPKRSVN 346
D Y E S T+P + A ++ ++
Sbjct: 356 DSSYSCLEVLSGHTKPVKSLAAVREKELD 384
>7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 553
Score = 52.4 bits (124), Expect = 2e-06
Identities = 34/137 (24%), Positives = 59/137 (42%), Gaps = 18/137 (13%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPV 145
+ GH V DFSP HI A+GS D IW++ + +PV
Sbjct: 430 IMFLEGHLGAVFGVDFSPNGFHI-ATGSQDNTCKIWDL----------------RRRQPV 472
Query: 146 RMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSY 204
+ H+ + + + + L + S D T KIW + TL+ H + V S+ +
Sbjct: 473 YTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAP 532
Query: 205 DGKHLVTVSRDKKLRVW 221
+ +++ T S D+ ++W
Sbjct: 533 NSQYIATTSFDRTFKLW 549
Score = 51.6 bits (122), Expect = 4e-06
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 90 RGHTAQVLDTDFSPF------NDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK 143
RGH + V P N +ASG DG + +W + + +
Sbjct: 300 RGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIAD------------ 347
Query: 144 PVRMLSGHS-RKVGHLLFHPLAENILASSSLDYTVKIWDISQE-EVKFTLKHPDMVTSMS 201
++GH +V + FHP + LA++ D + ++WD+ Q+ EV H V +S
Sbjct: 348 ----ITGHMPHRVSKVAFHP-SGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLS 402
Query: 202 FSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGA 238
+ DG LVT D RVWD+R + + H GA
Sbjct: 403 YHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGA 439
>SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 506
Score = 52.0 bits (123), Expect = 3e-06
Identities = 61/227 (26%), Positives = 95/227 (40%), Gaps = 36/227 (15%)
Query: 104 FNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHPL 163
++D I+ SGS D + +W++ + L++ L GHS V L F
Sbjct: 229 YDDEIMVSGSKDRTVSVWDVNSRFILYK----------------LYGHSGSVLCLDF-CR 271
Query: 164 AENILASSSLDYTVKIWD-ISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWD 222
N+L S S D T+ IWD ++ +K H D V + S + ++++ SRD RVW
Sbjct: 272 RRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN--YIISSSRDHTARVWR 329
Query: 223 V----RAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDAFNLEKGNL 278
+ AE + H + N V + T + T SDR + WD + G+
Sbjct: 330 LDATSPAEACMHVLRGHLASVNS-VQYSSKTGLIVTAS----SDRTLRTWD---ITTGHC 381
Query: 279 GGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQNDELYEL 325
+ Q GI Y N V+G D IR FE + +L +
Sbjct: 382 IRIIHAHQ-RGIACAQY---NGKFIVSGSSDLTIRIFEASSGKLLRM 424
>Hs20537071 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 348
Score = 52.0 bits (123), Expect = 3e-06
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 169 ASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKI 228
A+++ D+T K+WD + TL H +V ++ F D +L+T +DK LR++D+ K
Sbjct: 73 ATAAADFTAKVWDAVLGDELMTLAHKYIVKTVYFMQDSNYLLTKGQDKLLRMYDLNKPKA 132
Query: 229 -VSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWD 269
E H+ +R++W + ++ + D+ +WD
Sbjct: 133 RPKEISGHTSGIKKRLLWCSEDKQILSA-----DDKTARLWD 169
>Hs20143912 [R] KOG0266 WD40 repeat-containing protein
Length = 275
Score = 52.0 bits (123), Expect = 3e-06
Identities = 48/202 (23%), Positives = 77/202 (37%), Gaps = 45/202 (22%)
Query: 77 KEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEE 136
KE+GK+ + HT V D F+P I+ S S D + +W++ +D + + +
Sbjct: 11 KEIGKLLLNLV---DHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGH 67
Query: 137 ---------------------------GNPKDLKPVRMLSGHSRKVGHLLFHPLAENILA 169
N +R L GH V F P +LA
Sbjct: 68 QNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGA-LLA 126
Query: 170 SSSLDYTVKIWDISQEEVKFTLKH--------------PDMVTSMSFSYDGKHLVTVSRD 215
++S D V IWD ++ H V S+SFS+DG H+ +++ D
Sbjct: 127 TASYDTRVYIWDPHNGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVASLADD 186
Query: 216 KKLRVWDVRAEKIVSEGPAHSG 237
K +R W + + V P +G
Sbjct: 187 KMVRFWRIDEDYPVQVAPLSNG 208
>At5g43920 [S] KOG0293 WD40 repeat-containing protein
Length = 523
Score = 52.0 bits (123), Expect = 3e-06
Identities = 31/94 (32%), Positives = 49/94 (51%), Gaps = 18/94 (19%)
Query: 89 FRGH--TAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVR 146
F GH + V+ + F + +ASGS+D ++ IW N K+ KP+
Sbjct: 436 FSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIW----------------NLKNTKPLE 479
Query: 147 MLSGHSRKVGHLLFHPLAENILASSSLDYTVKIW 180
+LSGHS V + ++P +LAS+S D T++IW
Sbjct: 480 VLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At3g18140 [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 305
Score = 52.0 bits (123), Expect = 3e-06
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 141 DLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTS 199
+ +P+ L H+ + L P A LA++S D TVKIW++ +++ L H V
Sbjct: 200 EFEPLHKLQAHNGHILKCLLSP-ANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWD 258
Query: 200 MSFSYDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGA 238
FS DG+ LVT S D R+W + A K V H A
Sbjct: 259 CVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKA 297
>At2g26060 [R] KOG0645 WD40 repeat protein
Length = 323
Score = 52.0 bits (123), Expect = 3e-06
Identities = 43/163 (26%), Positives = 72/163 (43%), Gaps = 24/163 (14%)
Query: 77 KEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEE 136
K G + + GH +V ++ + +A+ S D + IWE+ E
Sbjct: 94 KNYGSEFECISTLEGHENEVKSVSWNA-SGSCLATCSRDKSVWIWEVLE----------- 141
Query: 137 GNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK---- 192
GN D V L+GH++ V + +HP + +L S S D T+K+W ++ ++
Sbjct: 142 GNEYDCAAV--LTGHTQDVKMVQWHPTMD-VLFSCSYDNTIKVWWSEDDDGEYQCVQTLG 198
Query: 193 -----HPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVS 230
H V S+SF+ G +VT S D L++W K+ S
Sbjct: 199 ESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQS 241
>At1g18080 [T] KOG0279 G protein beta subunit-like protein
Length = 327
Score = 52.0 bits (123), Expect = 3e-06
Identities = 44/141 (31%), Positives = 65/141 (45%), Gaps = 16/141 (11%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
F GHT VL FS N IV S S D I +W G +Y EG
Sbjct: 101 FVGHTKDVLSVAFSLDNRQIV-SASRDRTIKLWNT---LGECKYTISEGG---------- 146
Query: 149 SGHSRKVGHLLFHP-LAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDG 206
GH V + F P + + S+S D TVK+W++S +++ TL H V++++ S DG
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 207 KHLVTVSRDKKLRVWDVRAEK 227
+ +D + +WD+ K
Sbjct: 207 SLCASGGKDGVVLLWDLAEGK 227
Score = 51.2 bits (121), Expect = 5e-06
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 21/149 (14%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPED---YGLHEYVDEEGNPKDLKPVR 146
R HT V N I+ S S D I +W++ +D YG+ + R
Sbjct: 12 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQ--------------R 57
Query: 147 MLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQE-EVKFTLKHPDMVTSMSFSYD 205
L+GHS V ++ + L S S D +++WD++ + + H V S++FS D
Sbjct: 58 RLTGHSHFVEDVVLSSDGQFAL-SGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLD 116
Query: 206 GKHLVTVSRDKKLRVWDVRAE--KIVSEG 232
+ +V+ SRD+ +++W+ E +SEG
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEG 145
>Hs7108333_2 [R] KOG4155 FOG: WD40 repeat
Length = 668
Score = 52.0 bits (123), Expect = 3e-06
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 19/135 (14%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
+ H +VL FS +D +A+ S D K+ IW +H Y DE
Sbjct: 74 KAHEDEVLCCAFST-DDRFIATCSVDKKVKIWNSMTGELVHTY-DE-------------- 117
Query: 150 GHSRKVGHLLFHPLAENIL-ASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSYDGK 207
HS +V F + ++L A+ S D +K+WD++Q+E + T+ H + V FS D K
Sbjct: 118 -HSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDK 176
Query: 208 HLVTVSRDKKLRVWD 222
L + S D L++WD
Sbjct: 177 LLASCSADGTLKLWD 191
>Hs4502123_2 [R] KOG4155 FOG: WD40 repeat
Length = 625
Score = 52.0 bits (123), Expect = 3e-06
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 19/135 (14%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
+ H +VL FS +D +A+ S D K+ IW +H Y DE
Sbjct: 74 KAHEDEVLCCAFST-DDRFIATCSVDKKVKIWNSMTGELVHTY-DE-------------- 117
Query: 150 GHSRKVGHLLFHPLAENIL-ASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSYDGK 207
HS +V F + ++L A+ S D +K+WD++Q+E + T+ H + V FS D K
Sbjct: 118 -HSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDK 176
Query: 208 HLVTVSRDKKLRVWD 222
L + S D L++WD
Sbjct: 177 LLASCSADGTLKLWD 191
>At5g56130 [S] KOG1407 WD40 repeat protein
Length = 315
Score = 51.6 bits (122), Expect = 4e-06
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
++GH +V ++ N +ASGS D IW I E +G KDL+ L
Sbjct: 16 YQGHKKKVHSVAWNS-NGTKLASGSVDQTARIWNI-EPHG-------HSKAKDLE----L 62
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSYDGKH 208
GH+ V L + P +++A++S D +V++WD + ++ ++++ DG H
Sbjct: 63 KGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGTH 122
Query: 209 LVTVSRDKKLRVWDVRAEK 227
+ +RD +L + DVR K
Sbjct: 123 VAVGNRDDELTILDVRKFK 141
>At5g49200 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 419
Score = 51.6 bits (122), Expect = 4e-06
Identities = 51/189 (26%), Positives = 84/189 (43%), Gaps = 29/189 (15%)
Query: 43 TSNAWDSNLIKCNGKYISVNWNSSGGGAFAVIPVKEVGKIPDQVPLFRGHTAQVLDTDFS 102
T WD N +C S+N ++ G + P +G +P+ + F T+Q L +
Sbjct: 154 TLRVWDCNSGQC---VHSINLDAEAGSLISEGPWVFLG-LPNAIKAFNVQTSQDLHLQAA 209
Query: 103 PFNDHIVA---------SGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSR 153
+ A +G+ G I +W+ D E +P K + L GHS
Sbjct: 210 GVVGQVNAMTIANGMLFAGTSSGSILVWKAT--------TDSESDP--FKYLTSLEGHS- 258
Query: 154 KVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTV 212
G + + +L S S+D T+K+WD++ + TLK H VTS+ +D K L++
Sbjct: 259 --GEVTCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSL-LCWD-KCLISS 314
Query: 213 SRDKKLRVW 221
S D ++VW
Sbjct: 315 SLDGTIKVW 323
>At2g01330 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 611
Score = 51.6 bits (122), Expect = 4e-06
Identities = 52/194 (26%), Positives = 78/194 (39%), Gaps = 23/194 (11%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
FR +V D +S IVASG GK + D G +
Sbjct: 96 FRVLAGRVDDLQWSFDGLRIVASGDGKGKSLVRSFAWDSG--------------NTMGDF 141
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGK 207
GHSR+V F P +A+ D+ V +D + + + H + V + +S DG
Sbjct: 142 DGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGT 201
Query: 208 HLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQ--RVVWLGDTDKVATTGFSRLSDRQI 265
+TVS DKK ++D + V E + G K V W D+ +V T +D+
Sbjct: 202 KFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVS----ADKSA 257
Query: 266 GVWDAFNLEKGNLG 279
VW+ E G +G
Sbjct: 258 KVWEV--AEDGTIG 269
>7300980 [R] KOG4155 FOG: WD40 repeat
Length = 743
Score = 51.6 bits (122), Expect = 4e-06
Identities = 52/217 (23%), Positives = 94/217 (42%), Gaps = 33/217 (15%)
Query: 43 TSNAWDSNLIKCNGKYISVNW-----NSSGGGAFAVIPVKEVG------KIPDQVPLFRG 91
T W ++ + C Y S N+ + S G + V K++ + + ++ G
Sbjct: 520 TMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQYVVTGSKDLSARLWSLEKEHALIIYAG 579
Query: 92 HTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGH 151
HT V F P N + +A+GS D + +W K +R+ +
Sbjct: 580 HTQDVECVAFHP-NGNYIATGSADHSVRLWCATSG----------------KLMRVFADC 622
Query: 152 SRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLV 210
+ V L F P + +LA++ + V+I+D++ LK H ++S+S+S +HL
Sbjct: 623 RQAVTQLAFSPDGK-MLAAAGEETKVRIFDLAAGAQLAELKDHSASISSLSWSTHNRHLA 681
Query: 211 TVSRDKKLRVWDVRAEKIVSEGP---AHSGAKNQRVV 244
T D LR+WD++ +S+ + S A RV+
Sbjct: 682 TACSDGTLRLWDIKKLSPMSDNSSAGSSSSATTNRVL 718
>CE20251_2 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 287
Score = 51.6 bits (122), Expect = 4e-06
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 26/190 (13%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
F H+ + P +++ S SDD KI +W+ ++ + + E
Sbjct: 88 FTAHSDFIRSLTVHPTLPYLI-SASDDRKIRVWDWENEWRMEQEFQE------------- 133
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGK 207
H+ + + +P + S SLD T+K+W + ++E TL+ H V + F G+
Sbjct: 134 --HAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFLTGGR 191
Query: 208 HLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGV 267
+V+ S D + VWD++ +K + KN + T S D + +
Sbjct: 192 -IVSGSDDCSICVWDIQTQKCIET------LKNAHKNNVTFVTPFKTWIISGAEDSTVKI 244
Query: 268 WDA--FNLEK 275
W++ F+LEK
Sbjct: 245 WNSQTFSLEK 254
>SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 854
Score = 51.2 bits (121), Expect = 5e-06
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDI-SQEEVKFTLKHPDMVTSMSFSYDG 206
L+GH V L F+ + ++LAS S D TV+IWDI S+ + L P V S++F DG
Sbjct: 463 LAGHEGPVSSLSFNS-SGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAFHPDG 521
Query: 207 KHLVTVSRDKKLRVWDVRAEKIVS 230
K + S D +L W+V+ K S
Sbjct: 522 KEVCVASLDGQLTFWNVQEGKQTS 545
>CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 809
Score = 51.2 bits (121), Expect = 5e-06
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 21/138 (15%)
Query: 101 FSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLF 160
F+P D A+ SDDG +W+ Y +E R+L GH +V + +
Sbjct: 225 FAP-TDVKFATASDDGTARVWDFAR------YTEE----------RVLRGHGAEVRCIDW 267
Query: 161 HPLAENILASSSLD--YTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDGKHLVTVSRDKK 217
HP + ++A+ S D VKIWD TL+ H V ++ F+ +G L+T RD
Sbjct: 268 HP-TKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHL 326
Query: 218 LRVWDVRAEKIVSEGPAH 235
++++D+R K + AH
Sbjct: 327 VKMYDIRMMKEMRTYRAH 344
>CE13295 [S] KOG0772 Uncharacterized conserved protein contains WD40 repeat
Length = 620
Score = 51.2 bits (121), Expect = 5e-06
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 90 RGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLS 149
+GHTA V +F+P N + S SDDG + +W + + H+ + + N K K ++
Sbjct: 221 KGHTATVNCVEFNPLNKNEFISCSDDGSLRLWNLDD----HKVITKCIN-KHRKVIKTKG 275
Query: 150 GHSRKVGHLL--FHPLAENILASSSLDYTVKIWDISQEEVKFTL----KHPDMVTSMSFS 203
+ ++V + F P + I A D +V+ W + V H +TS++FS
Sbjct: 276 ANGKRVSPQVCTFSPDGKWIAAGCD-DGSVQAWKYGSQYVNVNYLVRKAHNGSITSIAFS 334
Query: 204 YDGKHLVTVSRDKKLRVWDV 223
D K L++ D L++W +
Sbjct: 335 PDSKRLLSRGFDDTLKMWSL 354
>At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 522
Score = 51.2 bits (121), Expect = 5e-06
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 26/176 (14%)
Query: 101 FSPFNDHIVASGSDDGKIGIWE-----IPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKV 155
FSP + +AS S DG I +W+ + +D +Y +E PV + SR
Sbjct: 232 FSP-DGQFLASSSVDGFIEVWDYISGKLKKDL---QYQADESFMMHDDPVLCID-FSRD- 285
Query: 156 GHLLFHPLAENILASSSLDYTVKIWDISQEE-VKFTLKHPDMVTSMSFSYDGKHLVTVSR 214
+LAS S D +KIW I ++ H VTS+SFS DG L++ S
Sbjct: 286 ---------SEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSF 336
Query: 215 DKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVWDA 270
D+ R+ +++ K++ E H+ N ++ D ++ T SD + VWD+
Sbjct: 337 DQTARIHGLKSGKLLKEFRGHTSYVN-HAIFTSDGSRIITAS----SDCTVKVWDS 387
>At1g62020 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1216
Score = 51.2 bits (121), Expect = 5e-06
Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 16/151 (10%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEI---------PED--YGLHEYVD 134
V + GH V+ F P D +V S S D + +W+I P D L +
Sbjct: 128 VSVLTGHNHYVMCASFHPKED-LVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNS 186
Query: 135 EEGNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQE---EVKFTL 191
+ D +L GH R V FHP ++ S + D VK+W +++ EV
Sbjct: 187 DLFGGVDAIVKYVLEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETKAWEVDTLR 245
Query: 192 KHPDMVTSMSFSYDGKHLVTVSRDKKLRVWD 222
H + V+S+ F +V+ S DK +RVWD
Sbjct: 246 GHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
>At1g48630 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 51.2 bits (121), Expect = 5e-06
Identities = 56/245 (22%), Positives = 103/245 (41%), Gaps = 38/245 (15%)
Query: 92 HTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPED---YGLHEYVDEEGNPKDLKPVRML 148
HT V N ++ + S D I +W++ ++ YG+ + R +
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQ--------------RRM 59
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ-EEVKFTLKHPDMVTSMSFSYDGK 207
+GHS V ++ + L S S D +++WD++ E + + H V S++FS D +
Sbjct: 60 TGHSHFVQDVVLSSDGQFAL-SGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 208 HLVTVSRDKKLRVWDVRAE--KIVSEGPAHSGAKNQRVVWLG----DTDKVATTGFSRLS 261
+V+ SRD+ +++W+ E +SE H W+ + + T S
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEADGHK-------EWVSCVRFSPNTLVPTIVSASW 171
Query: 262 DRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEF-QND 320
D+ + VW+ N + N + SG L + L +G DG I ++ +
Sbjct: 172 DKTVKVWNLQNCKLRN-----TLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Query: 321 ELYEL 325
+LY L
Sbjct: 227 KLYSL 231
>7291600 [I] KOG0278 Serine/threonine kinase receptor-associated protein
Length = 328
Score = 51.2 bits (121), Expect = 5e-06
Identities = 68/277 (24%), Positives = 114/277 (40%), Gaps = 35/277 (12%)
Query: 85 QVPLF-RGHTAQVLDTDFSPFND--HIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKD 141
Q+PL GHT V+ DFS D + + S DG + G+ D
Sbjct: 8 QIPLTCSGHTRPVVHLDFSDICDAGYFLISACKDGSPML--------------RHGDTGD 53
Query: 142 LKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMS 201
V GH V + + A + AS + D+T K+W+ + +H +V S++
Sbjct: 54 W--VGTFEGHKGAVWNATLNRNA-TLAASGAADFTGKVWNAVTGAEIHSFQHKHIVKSVA 110
Query: 202 FSYDGKHLVTVSRDKKLRVWDV-RAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRL 260
F D +++VT S +K +RV+++ + E E H+GA + + GD + S
Sbjct: 111 FDRDSENIVTGSNEKLVRVFNLEQPEAQPEEYAGHTGAIKRALFCRGDKCII-----SAA 165
Query: 261 SDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQND 320
D+ + +WD + F + S I N IL ++ +I ++E D
Sbjct: 166 EDKTVRLWDRMTGIEVQRLQFNSNPNSLEI-----SSDNHILTIS--HGSSISFWEI--D 216
Query: 321 ELYELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYK 357
L +L E + ++ P + V V E K YK
Sbjct: 217 TLKKLKEVKVPTNVASASLHPDKHVFVCGGEDFKMYK 253
>YDR267c [R] KOG0645 WD40 repeat protein
Length = 330
Score = 50.8 bits (120), Expect = 7e-06
Identities = 53/243 (21%), Positives = 106/243 (42%), Gaps = 43/243 (17%)
Query: 104 FNDHIVASGSDDGKIGIWEIP-EDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHLLFHP 162
F+ I+A+GS D KI + + +D+ L + +DE + H + + + + P
Sbjct: 22 FSQGILATGSTDRKIKLVSVKYDDFTLIDVLDE-------------TAHKKAIRSVAWRP 68
Query: 163 LAENILASSSLDYTVKIWDISQEEVKFTLK---------HPDMVTSMSFSYDGKHLVTVS 213
++LA+ S D TV IW +E T + H + V +++S DG +L T S
Sbjct: 69 HT-SLLAAGSFDSTVSIW-AKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS 126
Query: 214 RDKKLRVWDV----RAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFS---RLSDRQIG 266
RDK + +W+ + +S HS + V+W +A++ + R+
Sbjct: 127 RDKSVWIWETDESGEEYECISVLQEHS-QDVKHVIWHPSEALLASSSYDDTVRIWKDYDD 185
Query: 267 VWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYV-AGKGDGNIRYFEFQNDELYEL 325
W+ + G+ G ++ D +D + + + +G D +R +++ D+ +
Sbjct: 186 DWECVAVLNGHEGTVWSSD---------FDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236
Query: 326 SEY 328
E+
Sbjct: 237 QEW 239
>SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 605
Score = 50.8 bits (120), Expect = 7e-06
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 34/244 (13%)
Query: 147 MLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ-EEVKFTLKHPDMVTSMSFSYD 205
+LSGHS V L L NILAS S D T+++W+++ ++V H VT + F D
Sbjct: 268 VLSGHSDGVMCL---QLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--D 322
Query: 206 GKHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGF------SR 259
L++ S DK +R+W+ R + +S + G TD V F S
Sbjct: 323 QCKLISGSMDKTIRIWNYRTSECIS-------------ILHGHTDSVLCLTFDSTLLVSG 369
Query: 260 LSDRQIGVWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQ- 318
+D + +W ++ L G S I+ +R L ++G D I+ + +
Sbjct: 370 SADCTVKLWHFSGGKRITLRGHTGPVNSVRII------RDRGLVLSGSDDSTIKIWSLET 423
Query: 319 NDELYELSEYQSTEPQRGFAVAPKRSVNVKENEVLKAYKAVGEHAVEPISFYVPRKSEVF 378
N L+ S + P + A+A R + + +K + + V + ++ E+
Sbjct: 424 NTCLHTFSAH--IGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIA 481
Query: 379 QDDI 382
D +
Sbjct: 482 ADHL 485
>Hs18677720 [R] KOG0266 WD40 repeat-containing protein
Length = 421
Score = 50.8 bits (120), Expect = 7e-06
Identities = 44/187 (23%), Positives = 70/187 (36%), Gaps = 42/187 (22%)
Query: 92 HTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEE--------------- 136
HT V D F+P I+ S S D + +W++ +D + + +
Sbjct: 169 HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSM 228
Query: 137 ------------GNPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQ 184
N +R L GH V F P +LA++S D V IWD
Sbjct: 229 LCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGA-LLATASYDTRVYIWDPHN 287
Query: 185 EEVKFTLKH--------------PDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVS 230
++ H V S+SFS+DG H+ +++ DK +R W + + V
Sbjct: 288 GDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVASLADDKMVRFWRIDEDYPVQ 347
Query: 231 EGPAHSG 237
P +G
Sbjct: 348 VAPLSNG 354
>CE12908 [S] KOG0321 WD40 repeat-containing protein L2DTL
Length = 727
Score = 50.8 bits (120), Expect = 7e-06
Identities = 34/135 (25%), Positives = 65/135 (47%), Gaps = 14/135 (10%)
Query: 101 FSPF--NDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVGHL 158
FSP +HI+ G D G IGI+++ + + P + + + H + +
Sbjct: 47 FSPHLNQEHILYMGDDPGNIGIFDVRK-------FQDRSVPLEERQLYFFPAHDGAIMDV 99
Query: 159 LFHPLAENILASSSLDYTVKIWDISQEEV----KFTLKHPDMVTSMSFSYDGKHL-VTVS 213
+ P E+ + S S D T++ WD++Q + + H V S+ F+ D ++ VT
Sbjct: 100 VGVPQKESQIVSISGDSTIRCWDLNQSTLDRKSQVFFGHEGSVRSICFAPDDPNVFVTGG 159
Query: 214 RDKKLRVWDVRAEKI 228
RD ++++WD+R +
Sbjct: 160 RDFQVKIWDMRVSTV 174
>At5g02430 [S] KOG0283 WD40 repeat-containing protein
Length = 905
Score = 50.8 bits (120), Expect = 7e-06
Identities = 28/88 (31%), Positives = 47/88 (52%), Gaps = 3/88 (3%)
Query: 143 KPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSF 202
KP+ +GH V L + +L SSS+D TV++WDI + H D VT + F
Sbjct: 510 KPICSFTGHLDDVLDLSWS--RSQLLLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQF 567
Query: 203 S-YDGKHLVTVSRDKKLRVWDVRAEKIV 229
+ D + ++ S D K+R+W++ ++V
Sbjct: 568 NPLDEDYFISGSLDAKIRIWNISNRQVV 595
>7292122 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1234
Score = 50.8 bits (120), Expect = 7e-06
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 24/191 (12%)
Query: 89 FRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRML 148
F +A+V F P I+ S G I +W DY +H +++
Sbjct: 5 FESKSARVKGLSFHPKRPWILVS-LHSGVIQLW----DYRMHTLLEK------------F 47
Query: 149 SGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL-KHPDMVTSMSFSYDGK 207
H V + FH + S DY +K+W+ Q FTL H D V +++F ++
Sbjct: 48 DEHDGPVRGVAFHQQMP-LFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYP 106
Query: 208 HLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGV 267
+++ S D+ +R+W+ ++ + H+ V S D+ + V
Sbjct: 107 WILSASDDQTIRIWNWQSRNCICVLTGHN-----HYVMCAQFHPTEDQIVSASLDQTVRV 161
Query: 268 WDAFNLEKGNL 278
WD L K N+
Sbjct: 162 WDISGLRKKNV 172
>YMR116c [T] KOG0279 G protein beta subunit-like protein
Length = 319
Score = 50.4 bits (119), Expect = 9e-06
Identities = 47/199 (23%), Positives = 84/199 (41%), Gaps = 17/199 (8%)
Query: 91 GHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSG 150
GH V S +++ S S D + W++ D + K PVR G
Sbjct: 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGD-----------DQKFGVPVRSFKG 63
Query: 151 HSRKVGHLLFHPLAENILA-SSSLDYTVKIWDISQEEV-KFTLKHPDMVTSMSFSYDGKH 208
HS V A+ A S+S D T+++WD++ E + + H V S+
Sbjct: 64 HSHIVQDCTL--TADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASM 121
Query: 209 LVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIGVW 268
+++ SRDK ++VW ++ + + + + RVV D + T S +D+ + W
Sbjct: 122 IISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAW 181
Query: 269 --DAFNLEKGNLGGFYNVD 285
+ F +E +G N++
Sbjct: 182 NLNQFQIEADFIGHNSNIN 200
>Hs14523052 [K] KOG1034 Transcriptional repressor EED/ESC/FIE required for
transcriptional silencing WD repeat superfamily
Length = 427
Score = 50.4 bits (119), Expect = 9e-06
Identities = 23/97 (23%), Positives = 50/97 (50%), Gaps = 4/97 (4%)
Query: 138 NPKDLKPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTL----KH 193
NP ++ ++ GH + L FHP N+L S S D+ +++W+I + + H
Sbjct: 162 NPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGH 221
Query: 194 PDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEKIVS 230
D V S + G+ +++ D L++W + ++++++
Sbjct: 222 RDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMN 258
>CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 585
Score = 50.4 bits (119), Expect = 9e-06
Identities = 58/235 (24%), Positives = 95/235 (39%), Gaps = 34/235 (14%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
+ RGH V+ +D ++ +GSDD + +W I + ++ V G +
Sbjct: 248 VLRGHEDHVITC--MQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGG--------V 297
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDG 206
+ + G + S S D TVK+W + TL+ H V M+ + G
Sbjct: 298 WTSQISQCGRYI---------VSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--G 346
Query: 207 KHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIG 266
LVT SRD LRVWDV + + ++ H A R V D V + G+ D +
Sbjct: 347 SILVTGSRDTTLRVWDVESGRHLATLHGHHAA--VRCVQF-DGTTVVSGGY----DFTVK 399
Query: 267 VWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQNDE 321
+W N G + + + +S R + +G D +IR ++F E
Sbjct: 400 IW---NAHTGRC--IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPE 449
>CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 587
Score = 50.4 bits (119), Expect = 9e-06
Identities = 58/235 (24%), Positives = 95/235 (39%), Gaps = 34/235 (14%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRM 147
+ RGH V+ +D ++ +GSDD + +W I + ++ V G +
Sbjct: 250 VLRGHEDHVITC--MQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGG--------V 299
Query: 148 LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLK-HPDMVTSMSFSYDG 206
+ + G + S S D TVK+W + TL+ H V M+ + G
Sbjct: 300 WTSQISQCGRYI---------VSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--G 348
Query: 207 KHLVTVSRDKKLRVWDVRAEKIVSEGPAHSGAKNQRVVWLGDTDKVATTGFSRLSDRQIG 266
LVT SRD LRVWDV + + ++ H A R V D V + G+ D +
Sbjct: 349 SILVTGSRDTTLRVWDVESGRHLATLHGHHAA--VRCVQF-DGTTVVSGGY----DFTVK 401
Query: 267 VWDAFNLEKGNLGGFYNVDQSSGILMPFYDDSNRILYVAGKGDGNIRYFEFQNDE 321
+W N G + + + +S R + +G D +IR ++F E
Sbjct: 402 IW---NAHTGRC--IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPE 451
>CE02043 [R] KOG0289 mRNA splicing factor
Length = 509
Score = 50.4 bits (119), Expect = 9e-06
Identities = 46/160 (28%), Positives = 69/160 (42%), Gaps = 31/160 (19%)
Query: 68 GGAFAVIPVKEVGKIPDQVPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDY 127
G A AV+ + ++ K F GHTA V FS N + +A+GS+DG++ +W++ +
Sbjct: 373 GAADAVVKIWDL-KNQTVAAAFPGHTAAVRSIAFSE-NGYYLATGSEDGEVKLWDLRKLK 430
Query: 128 GLHEYVDEEGNPKDLKPVRM------LSGHSRKVGHLLFHPLAENILASSSLDYTVKIWD 181
L + +EE P + M + G +V H VK W
Sbjct: 431 NLKTFANEEKQPINSLSFDMTGTFLGIGGQKVQVLH-------------------VKSW- 470
Query: 182 ISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVW 221
EV H VT + F + + LVT S DK LRV+
Sbjct: 471 ---SEVVSLSDHSGPVTGVRFGENARSLVTCSLDKSLRVF 507
>At5g54200 [S] KOG0283 WD40 repeat-containing protein
Length = 825
Score = 50.4 bits (119), Expect = 9e-06
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 143 KPVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSF 202
KPV GH V L + L SSS+D TV++WD+S + H D VT + F
Sbjct: 459 KPVCSFVGHLDDVLDLSWSKSQH--LLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTCIQF 516
Query: 203 S-YDGKHLVTVSRDKKLRVWDVRAEKIVSEGPAH 235
+ D + ++ S D K+R+W + ++V H
Sbjct: 517 NPVDDNYFISGSLDAKVRIWSIPDHQVVDWNDLH 550
>At3g16650 [A] KOG0285 Pleiotropic regulator 1
Length = 477
Score = 50.4 bits (119), Expect = 9e-06
Identities = 43/166 (25%), Positives = 64/166 (37%), Gaps = 28/166 (16%)
Query: 88 LFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDY-------------GL----- 129
+ +GH V F P N+ +GS D I IW++ GL
Sbjct: 163 VLQGHLGWVRSVAFDPSNEWF-CTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNR 221
Query: 130 HEYVDEEGNPKDLK--------PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWD 181
H Y+ G+ K +K +R GH V L HP + +L D ++WD
Sbjct: 222 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGR-DSVCRVWD 280
Query: 182 ISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDKKLRVWDVRAEK 227
I + F L H V S+ ++T S D ++ WD+R K
Sbjct: 281 IRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGK 326
>At1g48870 [S] KOG0283 WD40 repeat-containing protein
Length = 593
Score = 50.4 bits (119), Expect = 9e-06
Identities = 41/162 (25%), Positives = 70/162 (42%), Gaps = 20/162 (12%)
Query: 86 VPLFRGHTAQVLDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLK-- 143
V GH ++ FSP ++ A+G +DG + IW I L + P + +
Sbjct: 191 VQKINGHKGKIWTLKFSPDGKYL-ATGGEDGVVKIWRITLSDSLLASFLRQQEPINQQAA 249
Query: 144 --------------PVRMLSGHSRKVGHLLFHPLAENILASSSLDYTVKIWDISQEEVKF 189
P + L GH+ V L + N+L S+S D TV++W ++
Sbjct: 250 LVLFPQKAFHIEETPFQELYGHTGDVLDLAWSD--SNLLLSASKDKTVRLWRTGCDQCLH 307
Query: 190 TLKHPDMVTSMSFSYDGK-HLVTVSRDKKLRVWDVRAEKIVS 230
H + VT + F+ K + + S D K R+W + E++V+
Sbjct: 308 VFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLSEERVVA 349
>Hs13994164_1 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 756
Score = 50.4 bits (119), Expect = 9e-06
Identities = 49/202 (24%), Positives = 83/202 (40%), Gaps = 31/202 (15%)
Query: 39 NLRITSNAWDSNLI--KCNGKYISVNWNSSGGGAFAVIPVKEVGKIPDQVPLFRGHTAQV 96
N+RI S+ W N + G I+V+ N ++ + +V IP + FRGH V
Sbjct: 404 NVRILSDTWVQNRVIHYSGGDLIAVSSNRK----IHLLDIIQVKAIPVE---FRGHAGSV 456
Query: 97 LDTDFSPFNDHIVASGSDDGKIGIWEIPEDYGLHEYVDEEGNPKDLKPVRMLSGHSRKVG 156
F ++ + SGS D I W++ K R+ GH G
Sbjct: 457 RAL-FLCEEENFLLSGSYDLSIRYWDL----------------KSGVCTRIFGGHQ---G 496
Query: 157 HLLFHPLAENILASSSLDYTVKIWDISQEEVKFTLKHPDMVTSMSFSYDGKHLVTVSRDK 216
+ L +N L S D VK+WD+ + T +H D + ++ + ++V+
Sbjct: 497 TITCMDLCKNRLVSGGRDCQVKVWDVDTGKCLKTFRHKDPI--LATRINDTYIVSSCERG 554
Query: 217 KLRVWDVRAEKIVSEGPAHSGA 238
++VW + ++V H GA
Sbjct: 555 LVKVWHIAMAQLVKTLSGHEGA 576
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.310 0.130 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,628,164
Number of Sequences: 60738
Number of extensions: 1685191
Number of successful extensions: 9672
Number of sequences better than 1.0e-05: 208
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 8137
Number of HSP's gapped (non-prelim): 774
length of query: 707
length of database: 30,389,216
effective HSP length: 114
effective length of query: 593
effective length of database: 23,465,084
effective search space: 13914794812
effective search space used: 13914794812
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)