ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV0711 good U KOG0861 Intracellular trafficking, secretion, and vesicular transport SNARE protein YKT6, synaptobrevin/VAMP syperfamily
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV0711 229166 228567 -200
(200 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YKL196c [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syperf... 343 9e-95
SPBC13G1.11 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP sy... 240 8e-64
Hs5730120 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP sype... 187 6e-48
At5g58060 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP sype... 183 1e-46
7290852 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syperf... 180 1e-45
At5g58180 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP sype... 170 1e-42
CE20451 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syperf... 165 3e-41
ECU03g0530 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syp... 72 7e-13
At1g11890 [U] KOG0862 Synaptobrevin/VAMP-like protein SEC22 60 3e-09
SPBC2A9.08c [U] KOG0862 Synaptobrevin/VAMP-like protein SEC22 59 4e-09
7290088 [U] KOG0862 Synaptobrevin/VAMP-like protein SEC22 55 8e-08
Hs5032137 [U] KOG0859 Synaptobrevin/VAMP-like protein 54 1e-07
YLR268w [U] KOG0862 Synaptobrevin/VAMP-like protein SEC22 54 1e-07
At2g25340 [U] KOG0859 Synaptobrevin/VAMP-like protein 54 1e-07
CE19895 [U] KOG0862 Synaptobrevin/VAMP-like protein SEC22 54 2e-07
7303846 [U] KOG0859 Synaptobrevin/VAMP-like protein 52 4e-07
Hs4759086 [U] KOG0862 Synaptobrevin/VAMP-like protein SEC22 50 3e-06
At5g11150 [U] KOG0859 Synaptobrevin/VAMP-like protein 48 8e-06
At4g32150 [U] KOG0859 Synaptobrevin/VAMP-like protein 48 8e-06
>YKL196c [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syperfamily
Length = 200
Score = 343 bits (880), Expect = 9e-95
Identities = 164/200 (82%), Positives = 186/200 (93%)
Query: 1 MKIYYIGVLRNSDDKTLELSSVKDLSQFGFFERNSVAQFMSFFSETVAGRTSAGQRQSVE 60
M+IYYIGV R+ +K LELS VKDLSQFGFFER+SV QFM+FF+ETVA RT AGQRQS+E
Sbjct: 1 MRIYYIGVFRSGGEKALELSEVKDLSQFGFFERSSVGQFMTFFAETVASRTGAGQRQSIE 60
Query: 61 EGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVTESDDSL 120
EGNY+GHVYAR EGICGVLITDKEYPVRPAYTLLNK+LDEYLVAHP +W DVTE++D+L
Sbjct: 61 EGNYIGHVYARSEGICGVLITDKEYPVRPAYTLLNKILDEYLVAHPKEEWADVTETNDAL 120
Query: 121 KLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEKLDNLVDKSESLS 180
K+K+LD YI+KYQDPSQADAIM+VQQELDETKI LHKTIENVLQRGEKLDNLVDKSESL+
Sbjct: 121 KMKQLDTYISKYQDPSQADAIMKVQQELDETKIVLHKTIENVLQRGEKLDNLVDKSESLT 180
Query: 181 AASRMFYKQAKKTNSCCIVM 200
A+S+MFYKQAKK+NSCCI+M
Sbjct: 181 ASSKMFYKQAKKSNSCCIIM 200
>SPBC13G1.11 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syperfamily
Length = 197
Score = 240 bits (613), Expect = 8e-64
Identities = 116/199 (58%), Positives = 149/199 (74%), Gaps = 3/199 (1%)
Query: 1 MKIYYIGVLRNSDDKTLELSSVKDLSQFGFFERNSVAQFMSFFSETVAGRTSAGQRQSVE 60
MK+Y + +LR L + DLS F FF+R+S+ +FM+FF++TVA RT+ GQRQ VE
Sbjct: 1 MKLYSVSILRFDPKPVQLLCTASDLSSFSFFQRSSIGEFMNFFTKTVAERTNPGQRQDVE 60
Query: 61 EGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVTESDDSL 120
+ NYV HVY R +G+CGV+ +DKEYP+R AYTLLNK+LDE+L +P +W+ +L
Sbjct: 61 QSNYVFHVYNRSDGLCGVIASDKEYPLRVAYTLLNKILDEFLTKNPRTKWE---SGAVTL 117
Query: 121 KLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEKLDNLVDKSESLS 180
ELD Y++KYQDP QAD IMRVQQELDETK LHKTIE+VL RGEKLD+L+ +S++LS
Sbjct: 118 SFPELDTYLSKYQDPKQADTIMRVQQELDETKDVLHKTIESVLARGEKLDDLIQRSDNLS 177
Query: 181 AASRMFYKQAKKTNSCCIV 199
SRMFYK AKK NSCCI+
Sbjct: 178 TQSRMFYKSAKKQNSCCII 196
>Hs5730120 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syperfamily
Length = 198
Score = 187 bits (476), Expect = 6e-48
Identities = 95/200 (47%), Positives = 134/200 (66%), Gaps = 2/200 (1%)
Query: 1 MKIYYIGVLRNSDDKTLELSSVKDLSQFGFFERNSVAQFMSFFSETVAGRTSAGQRQSVE 60
MK+Y + VL + K + L + D+S F FF+R+SV +FM+F S+ + R+S G R SV+
Sbjct: 1 MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVK 60
Query: 61 EGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVTESDDSL 120
E +Y+ HVY R + + GV+I D EYP R A+TLL KVLDE+ I W S ++
Sbjct: 61 EQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQVDRIDWP--VGSPATI 118
Query: 121 KLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEKLDNLVDKSESLS 180
LD ++++YQ+P +AD + +VQ ELDETKI LH T+E++L+RGEKLD+LV KSE L
Sbjct: 119 HYPALDGHLSRYQNPREADPMTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLG 178
Query: 181 AASRMFYKQAKKTNSCCIVM 200
S+ FYK A+K NSCC +M
Sbjct: 179 TQSKAFYKTARKQNSCCAIM 198
>At5g58060 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syperfamily
Length = 199
Score = 183 bits (465), Expect = 1e-46
Identities = 100/202 (49%), Positives = 137/202 (67%), Gaps = 5/202 (2%)
Query: 1 MKIYYIGVLRNSDDKT--LELSSVKDLSQFGFFERNSVAQFMSFFSETVAGRTSAGQRQS 58
MKI + VL+ + + + + LS+ D+S FG+F+R+SV +F+ F TVA RT QRQS
Sbjct: 1 MKITALLVLKCAPEASDPVILSNASDVSHFGYFQRSSVKEFVVFVGRTVASRTPPSQRQS 60
Query: 59 VEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVTESDD 118
V+ Y H Y R G+C V D YPVR A++LLN+VLDEY + W+ E D
Sbjct: 61 VQHEEYKVHAYNR-NGLCAVGFMDDHYPVRSAFSLLNQVLDEYQKSFGE-SWRSAKE-DS 117
Query: 119 SLKLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEKLDNLVDKSES 178
+ L + K+QDP++AD ++++Q+ELDETKI LHKTI++VL RGEKLD+LV+KS
Sbjct: 118 NQPWPYLTEALNKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSD 177
Query: 179 LSAASRMFYKQAKKTNSCCIVM 200
LS AS+MFYKQAKKTNSCC ++
Sbjct: 178 LSMASQMFYKQAKKTNSCCTIL 199
>7290852 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syperfamily
Length = 199
Score = 180 bits (456), Expect = 1e-45
Identities = 90/197 (45%), Positives = 128/197 (64%), Gaps = 2/197 (1%)
Query: 1 MKIYYIGVLRNSDDKTLELSSVKDLSQFGFFERNSVAQFMSFFSETVAGRTSAGQRQSVE 60
+K++ + + + L + DL F FF+R +V +FM+F S+T+ RT RQSV+
Sbjct: 2 VKLFALSIFHKGASEARLLKTASDLQSFSFFQRGTVNEFMTFASKTIVERTQPALRQSVK 61
Query: 61 EGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVTESDDSL 120
+ Y+ HVY R + + GVLI D EYP R A+TL+ K+LD++ QW + TE+ S
Sbjct: 62 QDAYMCHVYVRADNLAGVLIADHEYPHRVAHTLITKILDDFTAKVSADQWPNGTEATISF 121
Query: 121 KLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEKLDNLVDKSESLS 180
L L ++A+YQ+P +AD + ++Q +LDETKI L TIE VL+RGEKLD++V KSE LS
Sbjct: 122 DL--LPAFLARYQNPVEADPLTKMQNDLDETKIILKNTIEAVLERGEKLDDMVSKSEKLS 179
Query: 181 AASRMFYKQAKKTNSCC 197
S+ FYK AKKTNSCC
Sbjct: 180 LQSKAFYKTAKKTNSCC 196
>At5g58180 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syperfamily
Length = 199
Score = 170 bits (431), Expect = 1e-42
Identities = 102/205 (49%), Positives = 134/205 (64%), Gaps = 11/205 (5%)
Query: 1 MKIYYIGVLRNSDDKTLE---LSSVKDLSQFGFFE--RNSVAQFMSFFSETVAGRTSAGQ 55
MKI + VL+ D +T E L++V DLSQFG F R++ +F+ F + TVA RT GQ
Sbjct: 1 MKITALLVLK-CDPETREPVILANVSDLSQFGKFSFYRSNFEEFIVFIARTVARRTPPGQ 59
Query: 56 RQSVEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVTE 115
RQSV+ Y H Y G+C V D YPVR A++LLN+VLD Y + W+
Sbjct: 60 RQSVKHEEYKVHAY-NINGLCAVGFMDDHYPVRSAFSLLNQVLDVYQKDYGDT-WRFENS 117
Query: 116 SDDSLKLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEKLDNLVDK 175
S LKE K++DP++AD ++++Q+ELDETKI LHKTI+ VL RGEKLD+LV+K
Sbjct: 118 SQPWPYLKEAS---DKFRDPAEADKLLKIQRELDETKIILHKTIDGVLARGEKLDSLVEK 174
Query: 176 SESLSAASRMFYKQAKKTNSCCIVM 200
S LS AS+MFYKQAKKTNSCC ++
Sbjct: 175 SSELSLASKMFYKQAKKTNSCCTLL 199
>CE20451 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syperfamily
Length = 201
Score = 165 bits (418), Expect = 3e-41
Identities = 88/199 (44%), Positives = 125/199 (62%), Gaps = 3/199 (1%)
Query: 1 MKIYYIGVL-RNSDDKTLEL-SSVKDLSQFGFFERNSVAQFMSFFSETVAGRTSAGQRQS 58
MK+Y I V +N D ++L S DLS F FF+R SV +FM+F ++ + R+ G R S
Sbjct: 1 MKLYSILVFHKNVDTSDVKLFKSECDLSSFSFFQRGSVQEFMTFTAKLLVERSGLGARSS 60
Query: 59 VEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVTESDD 118
V+E Y+ H Y R +G+ V +TD EY R A + L +VLD++ P QW + SD
Sbjct: 61 VKENEYLVHCYVRNDGLSAVCVTDAEYQQRVAMSFLGRVLDDFTTRVPATQWPGI-RSDK 119
Query: 119 SLKLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEKLDNLVDKSES 178
L + K+Q+P +AD + RVQ+E++ETK+ +H TI++VL RGEKLD+LV KSE+
Sbjct: 120 DCSYTGLKDLLEKWQNPREADPMTRVQEEVEETKMVMHNTIQSVLDRGEKLDDLVKKSEN 179
Query: 179 LSAASRMFYKQAKKTNSCC 197
LS S+MFY A+K N CC
Sbjct: 180 LSDQSKMFYTSARKMNKCC 198
>ECU03g0530 [U] KOG0861 SNARE protein YKT6 synaptobrevin/VAMP syperfamily
Length = 176
Score = 71.6 bits (174), Expect = 7e-13
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 27/177 (15%)
Query: 25 LSQFGFFERNSVAQFMSFFSETVAGRTSAGQRQSVEEGNYVGHVYAR----PEGICGVLI 80
L QF FF R V + + F S+ +A + + Q Y + +
Sbjct: 23 LGQFSFFTRGKVRETLMFISKELAEKLETYEFQEYTHEFNDKKTYRLFSLVHNDLAYIAC 82
Query: 81 TDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVTESDDSLKLKELDIYIAKYQDPSQADA 140
D +YP A LL + + +++ I +Y+DP+
Sbjct: 83 ADDDYPGIVALKLLQEA-----------------------RHGDIEKLIEEYKDPASKHT 119
Query: 141 IMRVQQELDETKITLHKTIENVLQRGEKLDNLVDKSESLSAASRMFYKQAKKTNSCC 197
++++Q E++ETK L KT+ VL+R +KL++LV KSE L +++ +K AKK N CC
Sbjct: 120 LLQIQNEVEETKGALSKTLMAVLERNDKLEDLVAKSEHLCYETKLLFKSAKKKNRCC 176
>At1g11890 [U] KOG0862 Synaptobrevin/VAMP-like protein SEC22
Length = 218
Score = 59.7 bits (143), Expect = 3e-09
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 10/166 (6%)
Query: 38 QFMSFFSETVAGRTSAGQRQSVEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKV 97
Q + F G+ A R SVE G YV H Y +C + + D+ YP + A+ L +
Sbjct: 35 QVKALFKNLSRGQNDAS-RMSVETGPYVFH-YIIEGRVCYLTMCDRSYPKKLAFQYLEDL 92
Query: 98 LDEYLVAHPPIQWKDVTESDDSLKLKELDIYIAK----YQDPSQADAIMRVQQELDETKI 153
+E+ + P ++ + + D +I K YQD I ++ EL E
Sbjct: 93 KNEFERVNGP----NIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQ 148
Query: 154 TLHKTIENVLQRGEKLDNLVDKSESLSAASRMFYKQAKKTNSCCIV 199
+ + ++ VL GEKLD + + S L++ SR++ +AK N ++
Sbjct: 149 IMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQALI 194
>SPBC2A9.08c [U] KOG0862 Synaptobrevin/VAMP-like protein SEC22
Length = 209
Score = 58.9 bits (141), Expect = 4e-09
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 55 QRQSVEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVT 114
+R S+E G+Y H Y GIC + I ++ YP + A++ L ++ E+ W
Sbjct: 42 KRASIESGDYTFH-YLIDNGICYLCICEQSYPRKLAFSYLEELAGEF--------WNSFG 92
Query: 115 ESDDSLKLK-----ELDIYIAK----YQDPSQADAIMRVQQELDETKITLHKTIENVLQR 165
E L+ + D ++ K Y P D + ++ EL + + K IE++L R
Sbjct: 93 EEALQPGLRPYAFVQFDTFMQKSKRVYNTPRANDNLDKLNTELKDVTRVMTKNIEDLLYR 152
Query: 166 GEKLDNLVDKSESLSAASRMFYKQAKKTN 194
G+ L+ + D S L +S + K A++ N
Sbjct: 153 GDSLEKMADLSSDLRYSSAKYKKAARRVN 181
>7290088 [U] KOG0862 Synaptobrevin/VAMP-like protein SEC22
Length = 211
Score = 54.7 bits (130), Expect = 8e-08
Identities = 42/146 (28%), Positives = 69/146 (46%), Gaps = 7/146 (4%)
Query: 51 TSAGQRQSVEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQW 110
T + R S+E G Y+ H Y +C +++ DK Y R A+ L + E+ +
Sbjct: 46 THSPARCSIETGPYLFH-YLIENDVCYLVMVDKMYSKRLAFNYLEDLAQEFHANY----G 100
Query: 111 KDVTESDDSLKLKELDIYI--AKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEK 168
+ V E D+YI AK Q + I + +L + + + + I++VLQRG
Sbjct: 101 RRVNSVTRPYAFIEFDVYIQKAKKQLTDRRRNISNINTQLQDVQRIMVQNIDDVLQRGTV 160
Query: 169 LDNLVDKSESLSAASRMFYKQAKKTN 194
L L K+++LS S+ + K AK N
Sbjct: 161 LAELDTKTQNLSMMSQKYKKDAKLLN 186
>Hs5032137 [U] KOG0859 Synaptobrevin/VAMP-like protein
Length = 220
Score = 54.3 bits (129), Expect = 1e-07
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Query: 39 FMSFFSETVAGRTSAGQRQSVEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVL 98
F+ + +A S + + GNY+ H Y + I + ITD ++ A+ LN++
Sbjct: 25 FLEVTEQILAKIPSENNKLTYSHGNYLFH-YICQDRIVYLCITDDDFERSRAFNFLNEIK 83
Query: 99 DEYLVAHPPIQWKDVTESDDSLKLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKT 158
+ + + + +S L + + + D +M Q ++DE K + +
Sbjct: 84 KRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRN 143
Query: 159 IENVLQRGEKLDNLVDKSESLSAASRMF 186
I+ V QRGE+L+ L+DK+E+L +S F
Sbjct: 144 IDLVAQRGERLELLIDKTENLVDSSVTF 171
>YLR268w [U] KOG0862 Synaptobrevin/VAMP-like protein SEC22
Length = 214
Score = 53.9 bits (128), Expect = 1e-07
Identities = 38/143 (26%), Positives = 68/143 (46%), Gaps = 12/143 (8%)
Query: 58 SVEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAH------PPIQWK 111
++E G++ H Y + + +I + YP A++ LN + E+ + P ++
Sbjct: 50 TLESGSFEIH-YLKKSMVYYFVICESGYPRNLAFSYLNDIAQEFEHSFANEYPKPTVRPY 108
Query: 112 DVTESDDSLKLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEKLDN 171
D+ L++ + Y D D + ++ QEL K + K IE++L RG+ LD
Sbjct: 109 QFVNFDNFLQMTK-----KSYSDKKVQDNLDQLNQELVGVKQIMSKNIEDLLYRGDSLDK 163
Query: 172 LVDKSESLSAASRMFYKQAKKTN 194
+ D S SL S+ + K A+K N
Sbjct: 164 MSDMSSSLKETSKRYRKSAQKIN 186
>At2g25340 [U] KOG0859 Synaptobrevin/VAMP-like protein
Length = 219
Score = 53.9 bits (128), Expect = 1e-07
Identities = 35/139 (25%), Positives = 71/139 (50%), Gaps = 3/139 (2%)
Query: 58 SVEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHP-PIQWKDVTES 116
S + YV HV R +G+ + + D++ R ++ L + ++ + I
Sbjct: 45 SYSQDRYVFHV-KRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAM 103
Query: 117 DDSLKLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEKLDNLVDKS 176
+D + L+ I Y + AD I R++ E+++ + + + I+N+L RGE+L+ LVDK+
Sbjct: 104 NDEFS-RVLNQQIEYYSNDPNADTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKT 162
Query: 177 ESLSAASRMFYKQAKKTNS 195
++ + F KQ ++ N+
Sbjct: 163 ANMQGNTFRFRKQTRRFNN 181
>CE19895 [U] KOG0862 Synaptobrevin/VAMP-like protein SEC22
Length = 214
Score = 53.5 bits (127), Expect = 2e-07
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 53 AGQRQSVEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKD 112
A +QSVE G +V H Y + IC +++ D+ +P + A+ L+ + E+L +
Sbjct: 48 APAQQSVESGPFVFH-YIIVQNICALVLCDRNFPRKVAFQYLSDIGQEFLNENS----SR 102
Query: 113 VTESDDSLKLKELDIYI----AKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEK 168
+ + E D YI +Y D ++ A+ V EL + + IE+V+ RGE
Sbjct: 103 IEQVVRPYHFLEFDKYIQQAKQRYGDTNK-HAMNTVSNELQDVTRIMVTNIEDVIHRGEA 161
Query: 169 LDNLVDKSESLSAASRMFYKQAKKTN 194
L+ L +++ LS S+ + AK N
Sbjct: 162 LNILENRASELSGMSKKYRDDAKALN 187
>7303846 [U] KOG0859 Synaptobrevin/VAMP-like protein
Length = 218
Score = 52.4 bits (124), Expect = 4e-07
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 44 SETVAGRTSA-GQRQSVEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYL 102
+E + GR + + G+Y+ H Y + + ITD E+ A+ L + +++
Sbjct: 29 TEHIIGRIGVHNHKMTYTHGDYLIH-YTCENKLVYMCITDNEFERSRAFLFLADIKQKFI 87
Query: 103 VAHPPIQWKDVTESDDSLKLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTIENV 162
+ + S ++ K L + + + D I RV ++DE K + K I+++
Sbjct: 88 QTYGLQVATAIAYSMNTEFSKILAQQMVYFSQSREVDTISRVHGQIDELKDIMVKNIDSL 147
Query: 163 LQRGEKLDNLVDKSESLSAASRMFYKQAK 191
RGEKL+ LV+K+E+LS S F K ++
Sbjct: 148 RDRGEKLELLVNKTENLSNNSVAFRKASR 176
>Hs4759086 [U] KOG0862 Synaptobrevin/VAMP-like protein SEC22
Length = 215
Score = 49.7 bits (117), Expect = 3e-06
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Query: 56 RQSVEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVTE 115
R ++E G H Y +G+C +++ + +P + A+ L + E+ H K V
Sbjct: 51 RCTLEAGAMTFH-YIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHG----KKVPT 105
Query: 116 SDDSLKLKELDIYIAK----YQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEKLDN 171
E D +I K Y D + + EL + + + IE VLQRGE L
Sbjct: 106 VSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSA 165
Query: 172 LVDKSESLSAASRMFYKQAKKTN 194
L K+ +LS+ S+ + + AK N
Sbjct: 166 LDSKANNLSSLSKKYRQDAKYLN 188
>At5g11150 [U] KOG0859 Synaptobrevin/VAMP-like protein
Length = 221
Score = 48.1 bits (113), Expect = 8e-06
Identities = 38/168 (22%), Positives = 76/168 (44%), Gaps = 3/168 (1%)
Query: 25 LSQFGFFERNSVAQFMSFFSETVAGRTSAGQRQSVEEGNYVGHVYARPEGICGVLITDKE 84
LS+F N+ + E + G S S + Y+ HV R +G+ + + D+
Sbjct: 15 LSEFSATSTNA-SSISKQILEKLPGNDS-DSHMSYSQDRYIFHV-KRTDGLTVLCMADET 71
Query: 85 YPVRPAYTLLNKVLDEYLVAHPPIQWKDVTESDDSLKLKELDIYIAKYQDPSQADAIMRV 144
+ L+ + ++ + S + + L + Y + AD + R+
Sbjct: 72 AGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRVLSQQMEFYSNDPNADRMSRI 131
Query: 145 QQELDETKITLHKTIENVLQRGEKLDNLVDKSESLSAASRMFYKQAKK 192
+ E+ + + + + I+ VL RGE+L+ LVDK+E++ + F KQA++
Sbjct: 132 KGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARR 179
>At4g32150 [U] KOG0859 Synaptobrevin/VAMP-like protein
Length = 219
Score = 48.1 bits (113), Expect = 8e-06
Identities = 33/138 (23%), Positives = 67/138 (47%), Gaps = 1/138 (0%)
Query: 58 SVEEGNYVGHVYARPEGICGVLITDKEYPVRPAYTLLNKVLDEYLVAHPPIQWKDVTESD 117
S + YV HV R +G+ + + ++ R + L + ++ + + +
Sbjct: 45 SYSQDRYVFHV-KRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAYAM 103
Query: 118 DSLKLKELDIYIAKYQDPSQADAIMRVQQELDETKITLHKTIENVLQRGEKLDNLVDKSE 177
+ + L I Y + AD I R++ E+++ + + + I+ VL RGE+L+ LVDK+
Sbjct: 104 NEEFSRVLSQQIDYYSNDPNADRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTA 163
Query: 178 SLSAASRMFYKQAKKTNS 195
++ + F KQA++ S
Sbjct: 164 NMQGNTFRFRKQARRFRS 181
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.133 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,166,013
Number of Sequences: 60738
Number of extensions: 438979
Number of successful extensions: 1460
Number of sequences better than 1.0e-05: 19
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1441
Number of HSP's gapped (non-prelim): 20
length of query: 200
length of database: 30,389,216
effective HSP length: 101
effective length of query: 99
effective length of database: 24,254,678
effective search space: 2401213122
effective search space used: 2401213122
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)