ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV1101 suspect: LH S KOG4002 Function unknown Uncharacterized integral membrane protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV1101 362270 363058 263
(263 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLL023c [S] KOG4002 Uncharacterized integral membrane protein 151 8e-37
SPBC1539.04 [S] KOG4002 Uncharacterized integral membrane protein 80 2e-15
>YLL023c [S] KOG4002 Uncharacterized integral membrane protein
Length = 279
Score = 151 bits (382), Expect = 8e-37
Identities = 82/249 (32%), Positives = 137/249 (54%), Gaps = 11/249 (4%)
Query: 9 TITSRFLALTKTTKFAWFIGHFAVVLCSIFYWLSLRSTSLTEIWYRIIFLGAMESFGVLV 68
++ RF+A+ K+ +FAWF GH V++ SI Y L + +E +YR +LG +ESFG+++
Sbjct: 20 SLVQRFMAVAKSLQFAWFTGHSVVLISSILYLLKM-----SEFYYRSAYLGVIESFGIII 74
Query: 69 YQ---TYGKALKKGDVRNGSGPVNFRQ--VIRDENVLYFLLSATWLILSPRIAIATIPFF 123
YQ T + L+ D + R +++ E+VLY +L+ WL +PR + + IPFF
Sbjct: 75 YQQFFTRNEPLQTQDAAATKASIKSRVAGLLKSEDVLYLVLANFWLF-TPRFSFSLIPFF 133
Query: 124 IISLFHALTYIVTDIASNVLQVEDVKKHPYLRFIDTLVSDNHETSLNAICNSELLCLLYN 183
++FH L Y+ + V + L FID V ++ ++ + +ELL +
Sbjct: 134 AFAVFHVLIYVEKVLLPKVFHLSSKDSSKILSFIDKFVVQYNDLCMHWVGTAELLIFILV 193
Query: 184 FIRLLTFRSRSFIAFVAVFLFVRFKCYNSAHMKRSIAKWEVRLDGVIAHPAVPHPVKTQY 243
R + RS+I V +F++ + NS +MK + A+W VR+DG+I+HP++P VK Y
Sbjct: 194 LFRAILCFQRSWIILVVYAIFIKLRYENSKYMKAAFAQWRVRMDGIISHPSIPPFVKRAY 253
Query: 244 TNAKLLLRR 252
K+ L R
Sbjct: 254 NAIKMSLIR 262
>SPBC1539.04 [S] KOG4002 Uncharacterized integral membrane protein
Length = 279
Score = 80.5 bits (197), Expect = 2e-15
Identities = 61/254 (24%), Positives = 114/254 (44%), Gaps = 11/254 (4%)
Query: 10 ITSRFLALTKTTKFAWFIGHFAVVLCSIFYWL-SLRSTSLTEIWYRIIFLGAMESFGVLV 68
+ R L + K T+F WF G V++ S+ Y L ++ S ++ GA+ ++ +++
Sbjct: 11 LKERVLPVVKNTQFVWFSGQVIVLISSVLYALQAIPFRSAPPFLFKSAAFGAIVAYAIVL 70
Query: 69 YQTYGKALKKGDVRNGSGPVNFRQVIRDENVLYFLLSATWLILSPRIAIATIPFFIISLF 128
Y+TY L R F +++ D+NV YF+L+ + LI P I + P+ I + F
Sbjct: 71 YKTYSPNLTS---RASWNKHFFARLMLDDNVQYFILALSMLIDRP-ILFSLAPYAIYATF 126
Query: 129 HALTYIVTDIASNVL-QVEDVKKHPYLRFIDTLVSD----NHETSLNAICNSELLCLLYN 183
H TY+ + + + + D K Y + L++ + ++ + + E L
Sbjct: 127 HISTYLRSVLLPAIYPNISDAKTASYASRVSNLLNQYTRSQFQPAMQLVASLETFLLFRL 186
Query: 184 FIRLLTFRSRSFIAFVAVFLFVRFKCYNSAHMKRSIAKWEVRLDGVIAHPAVPHPVKTQY 243
F + R S V F+R + NS + SI +R+D ++A VP +K +
Sbjct: 187 FFGVF-LRKNSISRLVGYIFFLRMRYTNSHFTRASIKAVSLRMDRLVADNRVPPVIKNAW 245
Query: 244 TNAKLLLRRAFITP 257
K + + +P
Sbjct: 246 HTFKTYVSKFGASP 259
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.329 0.140 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,430,869
Number of Sequences: 60738
Number of extensions: 544699
Number of successful extensions: 1580
Number of sequences better than 1.0e-05: 2
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1573
Number of HSP's gapped (non-prelim): 2
length of query: 263
length of database: 30,389,216
effective HSP length: 104
effective length of query: 159
effective length of database: 24,072,464
effective search space: 3827521776
effective search space used: 3827521776
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)