ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV1104.1 suspect: Pn R KOG0619 General function prediction only FOG: Leucine rich repeat
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV1104.1 364193 363774 -140
(140 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
At3g11330 [R] KOG0619 FOG: Leucine rich repeat 30 0.77
CE01223 [R] KOG2331 Predicted glycosylhydrolase 30 1.3
At4g38640 [I] KOG1362 Choline transporter-like protein 28 2.9
7296663 [R] KOG0254 Predicted transporter (major facilitator sup... 28 3.8
CE28470 [H] KOG1381 Para-hydroxybenzoate-polyprenyl transferase 28 5.0
CE28469 [H] KOG1381 Para-hydroxybenzoate-polyprenyl transferase 28 5.0
YLR087c [S] KOG3596 Uncharacterized conserved protein 27 6.5
At4g26050 [R] KOG0619 FOG: Leucine rich repeat 27 6.5
At1g50430 [IT] KOG1435 Sterol reductase/lamin B receptor 27 6.5
CE27723 [T] KOG0192 Tyrosine kinase specific for activated (GTP-... 27 8.5
Hs20536645_1 [TW] KOG1225 Teneurin-1 and related extracellular m... 27 8.5
>At3g11330 [R] KOG0619 FOG: Leucine rich repeat
Length = 537
Score = 30.4 bits (67), Expect = 0.77
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 79 EVSTNQTLSIENSVGWVHSSLVLGSITNQSFSVGESDKRWGSSVTLVVSQN 129
+VSTN ++ +S+G + +L TN+ S+ +S R GS V L VS N
Sbjct: 288 DVSTNSLETLPDSIGLLSKLKILNVSTNKLTSLPDSICRCGSLVILDVSFN 338
>CE01223 [R] KOG2331 Predicted glycosylhydrolase
Length = 388
Score = 29.6 bits (65), Expect = 1.3
Identities = 14/54 (25%), Positives = 27/54 (49%)
Query: 51 FDFDLWLTSNVNDLEWEVLDITLNFCVTEVSTNQTLSIENSVGWVHSSLVLGSI 104
F FD WL + N ++ +D+ + FC + ++ ++ + V W S L G +
Sbjct: 99 FGFDGWLINIENKIDAGKIDLLIQFCSSLTEKSKKMNENSKVIWYDSVLDNGKL 152
>At4g38640 [I] KOG1362 Choline transporter-like protein
Length = 523
Score = 28.5 bits (62), Expect = 2.9
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 26 SSFLHLTQNHRGDFFWGENLVFTLVFD--------FDLWLTSNVNDLEWEVLDITLNFCV 77
+ FL ++ N F +++ F L+FD F ++ + N+ T +F
Sbjct: 46 TQFLQISYNFGPRTF--KDIPFLLLFDLLVLSTFGFGIFSIFHRNNDYGNSSSFTYDFTS 103
Query: 78 TEVSTNQTLS-IENSVGWVHSSLVLGSITNQSFSVGESDKRWGSSVTLVVSQNF 130
+ N T + I + W SS++ G +++ S V E D W VTL++S F
Sbjct: 104 SSCVKNSTFTKISDGYYWASSSVMYGMVSS-SDPVFEKDLIWTLVVTLILSVPF 156
>7296663 [R] KOG0254 Predicted transporter (major facilitator superfamily)
Length = 497
Score = 28.1 bits (61), Expect = 3.8
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 85 TLSIENSVGWVH-SSLVLGSITNQSFSV 111
TLS NSVGW++ ++GSI SF V
Sbjct: 143 TLSFANSVGWLYLGRFLIGSIATGSFCV 170
>CE28470 [H] KOG1381 Para-hydroxybenzoate-polyprenyl transferase
Length = 427
Score = 27.7 bits (60), Expect = 5.0
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 100 VLGSITNQSFSVGESDKRWGSSVT 123
++GS T+ S+S+ ES KRW S+ T
Sbjct: 18 IVGSNTSTSYSLDESTKRWISTST 41
>CE28469 [H] KOG1381 Para-hydroxybenzoate-polyprenyl transferase
Length = 356
Score = 27.7 bits (60), Expect = 5.0
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 100 VLGSITNQSFSVGESDKRWGSSVT 123
++GS T+ S+S+ ES KRW S+ T
Sbjct: 18 IVGSNTSTSYSLDESTKRWISTST 41
>YLR087c [S] KOG3596 Uncharacterized conserved protein
Length = 2958
Score = 27.3 bits (59), Expect = 6.5
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 81 STNQTLSI----ENSVGWV-HSSLVLGSITNQSFSVGESDKRWGSSVTLVV-SQNFDTVV 134
ST+Q S+ + S W+ H+S++LG + FSV + + W T+++ +Q D
Sbjct: 1672 STSQAGSLVIFSQKSEVWLKHTSVILGEAQLRDFSVLATTEAWSHKPTILINNQCADLHF 1731
Query: 135 RKVSNT 140
R +S+T
Sbjct: 1732 RAMSST 1737
>At4g26050 [R] KOG0619 FOG: Leucine rich repeat
Length = 382
Score = 27.3 bits (59), Expect = 6.5
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 74 NFCVTEVSTNQTLSIENSVGWVHSSLVLGSITNQSFSVGESDKRWGSSVTLVVSQNF 130
N V++N+ + + NSV ++ S VL + N+ S+ E + + L VSQNF
Sbjct: 174 NLTKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPEDLENLVNLQVLNVSQNF 230
>At1g50430 [IT] KOG1435 Sterol reductase/lamin B receptor
Length = 432
Score = 27.3 bits (59), Expect = 6.5
Identities = 15/52 (28%), Positives = 26/52 (49%), Gaps = 4/52 (7%)
Query: 38 DFFWGENLVFTLVFDFDLWLTSN--VNDLEWEVLDITLNFCVTEVSTNQTLS 87
DF+WG L + FD+ + +N + W VL +T +C+ + N +S
Sbjct: 175 DFYWGMELYPRIGKSFDIKVFTNCRFGMMSWAVLAVT--YCIKQYEINGKVS 224
>CE27723 [T] KOG0192 Tyrosine kinase specific for activated (GTP-bound)
p21cdc42Hs
Length = 850
Score = 26.9 bits (58), Expect = 8.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 16 VVNLATQVRFSSFLHLTQNHRGDFFWGENLVFTLV-FDFDLWLTSNVND 63
++N + + F+H T H +F EN V TL+ +L L VND
Sbjct: 169 LLNSGANIHVTDFVHFTALHCATYFGQENAVRTLISASANLNLGGAVND 217
>Hs20536645_1 [TW] KOG1225 Teneurin-1 and related extracellular matrix proteins
contain EGF-like repeats
Length = 1059
Score = 26.9 bits (58), Expect = 8.5
Identities = 13/46 (28%), Positives = 24/46 (51%)
Query: 56 WLTSNVNDLEWEVLDITLNFCVTEVSTNQTLSIENSVGWVHSSLVL 101
W+T N+ + W+ + T++ + ++ + E VG HSS VL
Sbjct: 890 WVTENMATVSWDPVQATIDKYMVRYTSADGETREVPVGKEHSSTVL 935
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,738,756
Number of Sequences: 60738
Number of extensions: 285790
Number of successful extensions: 631
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 623
Number of HSP's gapped (non-prelim): 13
length of query: 140
length of database: 30,389,216
effective HSP length: 95
effective length of query: 45
effective length of database: 24,619,106
effective search space: 1107859770
effective search space used: 1107859770
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)