ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV1130 good C KOG3432 Energy production and conversion Vacuolar H+-ATPase V1 sector, subunit F
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV1130 374127 374480 118
(118 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGR020c [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F 186 6e-48
SPBC3B9.18c [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F 131 2e-31
At4g02620 [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F 115 1e-26
Hs20357547 [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F 112 6e-26
CE02404 [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F 112 1e-25
7296636 [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F 110 3e-25
7303046 [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F 109 5e-25
ECU03g0305 [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F 54 3e-08
>YGR020c [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F
Length = 118
Score = 186 bits (471), Expect = 6e-48
Identities = 92/118 (77%), Positives = 104/118 (87%)
Query: 1 MADERNLIAVIADEDTTTGLLLAGIGQVSKESKEKNFVVYNEGKTTKLELSDAFVKFTET 60
MA++R LIAVIADEDTTTGLLLAGIGQ++ E++EKNF VY EGKTTK E++D F FTE
Sbjct: 1 MAEKRTLIAVIADEDTTTGLLLAGIGQITPETQEKNFFVYQEGKTTKEEITDKFNHFTEE 60
Query: 61 RPDIAILLINQHIADQIRPLVDGYTNAFPAILEIPSKDHPYDPEKDSVLRRVRRLFGE 118
R DIAILLINQHIA+ IR VD +TNAFPAILEIPSKDHPYDPEKDSVL+RVR+LFGE
Sbjct: 61 RDDIAILLINQHIAENIRARVDSFTNAFPAILEIPSKDHPYDPEKDSVLKRVRKLFGE 118
>SPBC3B9.18c [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F
Length = 120
Score = 131 bits (329), Expect = 2e-31
Identities = 65/115 (56%), Positives = 89/115 (76%), Gaps = 2/115 (1%)
Query: 4 ERNLIAVIADEDTTTGLLLAGIGQVSKESKEKNFVVYNEGKTTKLELSDAFVKFTETRPD 63
ER L++VI D+DT TG+LLAG GQV+ E+ +KNF + + KTT ++++AF +T R D
Sbjct: 8 ERTLVSVIGDDDTVTGMLLAGTGQVN-ENGDKNFFIITQ-KTTDEQIAEAFDDYTTKRKD 65
Query: 64 IAILLINQHIADQIRPLVDGYTNAFPAILEIPSKDHPYDPEKDSVLRRVRRLFGE 118
IAI+LINQ A++IR ++ + AFPA+LEIPSKD PYDPEKDS+LRRVR++ GE
Sbjct: 66 IAIVLINQFAAERIRDRIENHVQAFPAVLEIPSKDDPYDPEKDSILRRVRKIIGE 120
>At4g02620 [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F
Length = 128
Score = 115 bits (287), Expect = 1e-26
Identities = 62/110 (56%), Positives = 77/110 (69%), Gaps = 3/110 (2%)
Query: 7 LIAVIADEDTTTGLLLAGIGQVSKESKEKNFVVYNEGKTTKLELSDAFVKFTETRPDIAI 66
LIA+IADEDT G L+AG+G V K +V + KTT ++ DAF +F+ R DIAI
Sbjct: 14 LIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIV--DSKTTVRQIEDAFKEFS-ARDDIAI 70
Query: 67 LLINQHIADQIRPLVDGYTNAFPAILEIPSKDHPYDPEKDSVLRRVRRLF 116
+L++Q+IA+ IR LVD Y PAILEIPSKDHPYDP DSVL RV+ LF
Sbjct: 71 ILLSQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120
>Hs20357547 [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F
Length = 119
Score = 112 bits (281), Expect = 6e-26
Identities = 61/116 (52%), Positives = 80/116 (68%), Gaps = 3/116 (2%)
Query: 1 MADERNLIAVIADEDTTTGLLLAGIGQVSKESKEKNFVVYNEGKTTKLELSDAFVKFTET 60
MA LIAVI DEDT TG LL GIG+++K ++ NF+V E TT E+ D F +F
Sbjct: 1 MAGRGKLIAVIGDEDTVTGFLLGGIGELNK-NRHPNFLVV-EKDTTINEIEDTFRQFLN- 57
Query: 61 RPDIAILLINQHIADQIRPLVDGYTNAFPAILEIPSKDHPYDPEKDSVLRRVRRLF 116
R DI I+LINQ+IA+ +R +D + + PA+LEIPSK+HPYD KDS+LRR R +F
Sbjct: 58 RDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRARGMF 113
>CE02404 [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F
Length = 121
Score = 112 bits (279), Expect = 1e-25
Identities = 59/115 (51%), Positives = 78/115 (67%), Gaps = 3/115 (2%)
Query: 2 ADERNLIAVIADEDTTTGLLLAGIGQVSKESKEKNFVVYNEGKTTKLELSDAFVKFTETR 61
A + ++AVI DEDT G LL G+G+++K K +V + +TT E+ +AF F R
Sbjct: 4 AAKGKILAVIGDEDTVVGFLLGGVGELNKARKPNYLIV--DKQTTVQEIEEAFNGFC-AR 60
Query: 62 PDIAILLINQHIADQIRPLVDGYTNAFPAILEIPSKDHPYDPEKDSVLRRVRRLF 116
DIAI+LINQHIA+ IR VD +T + PA+LEIPSK+ PYDP KDS+L R R LF
Sbjct: 61 DDIAIILINQHIAEMIRYAVDNHTQSIPAVLEIPSKEAPYDPSKDSILNRARGLF 115
>7296636 [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F
Length = 124
Score = 110 bits (275), Expect = 3e-25
Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
Query: 3 DERNLIAVIADEDTTTGLLLAGIGQVSKESKEKNFVVYNEGKTTKLELSDAFVKFTETRP 62
D L+AVI DEDT G LL GIG+V E +E NF+V E TT ++ + F KF RP
Sbjct: 7 DLGRLLAVIGDEDTCVGFLLGGIGEVD-EDRETNFMVV-ERDTTPKQIEECFKKFLR-RP 63
Query: 63 DIAILLINQHIADQIRPLVDGYTNAFPAILEIPSKDHPYDPEKDSVLRRVRRL 115
DI I+LINQ AD IRP VD + A P +LEIPSK HPYD +DS+L+R +R+
Sbjct: 64 DIVIILINQVYADMIRPTVDAHNLAVPTVLEIPSKQHPYDSSRDSILKRAQRV 116
>7303046 [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F
Length = 124
Score = 109 bits (273), Expect = 5e-25
Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Query: 7 LIAVIADEDTTTGLLLAGIGQVSKESKEKNFVVYNEGKTTKLELSDAFVKFTETRPDIAI 66
LI+VI DEDT G LL G+G+++K ++ NF+V ++ T EL D F +F + R DI I
Sbjct: 11 LISVIGDEDTCVGFLLGGVGEINK-NRHPNFMVVDKN-TAVSELEDCFKRFLK-RDDIDI 67
Query: 67 LLINQHIADQIRPLVDGYTNAFPAILEIPSKDHPYDPEKDSVLRRVRRLF 116
+LINQ+ A+ IR ++D +T+ PA+LEIPSKDHPYD KDS+LRR R +F
Sbjct: 68 ILINQNCAELIRHVIDAHTSPVPAVLEIPSKDHPYDASKDSILRRARGMF 117
>ECU03g0305 [C] KOG3432 Vacuolar H+-ATPase V1 sector subunit F
Length = 95
Score = 53.9 bits (128), Expect = 3e-08
Identities = 32/96 (33%), Positives = 54/96 (55%), Gaps = 5/96 (5%)
Query: 3 DERNLIAVIADEDTTTGLLLAGIGQVSKESKEKNFVVYNEGKTTKLELSDAFVKFTETRP 62
D R I +I DE+T TG L+AG+ + + + ++ T++ +L AF T +R
Sbjct: 2 DNRTRIGIIGDEETLTGFLIAGV----ENTHDNPNLIQVASATSEDDLRRAFYSLT-SRE 56
Query: 63 DIAILLINQHIADQIRPLVDGYTNAFPAILEIPSKD 98
D+AI+L+ A++++ +D Y PAIL I SK+
Sbjct: 57 DLAIVLVCDFAAEKLKDEIDTYKEIVPAILVIASKN 92
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.137 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,846,761
Number of Sequences: 60738
Number of extensions: 256212
Number of successful extensions: 662
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 647
Number of HSP's gapped (non-prelim): 9
length of query: 118
length of database: 30,389,216
effective HSP length: 94
effective length of query: 24
effective length of database: 24,679,844
effective search space: 592316256
effective search space used: 592316256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)