ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV1135   suspect: LH   S     KOG1181  Function unknown                                               FOG: Low-complexity

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV1135 376199 374634 -522 
         (522 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YLR330w [S] KOG1181 FOG: Low-complexity                               318   1e-86

>YLR330w [S] KOG1181 FOG: Low-complexity
          Length = 671

 Score =  318 bits (816), Expect = 1e-86
 Identities = 179/350 (51%), Positives = 223/350 (63%), Gaps = 23/350 (6%)

Query: 2   VEVSLTVGKVDASLAILTTADHYVIEFPTVLLPESVEAGSVVTITVEQDLEQEIKQKKKF 61
           V+V LTVGK+DASLA+LTT DH+VIEFPTVLLPE+V+AGS++ + V Q+LE+E KQ+  F
Sbjct: 4   VDVLLTVGKLDASLALLTTQDHHVIEFPTVLLPENVKAGSIIKMQVSQNLEEEKKQRNHF 63

Query: 62  QSVQEQILAKYGTDPPAEPVLHLSNATQTSCVIHWDPIHLGSSQLKSLILYKQGNRHQVI 121
           +S+Q +IL KYGT  P  PVL + N TQTSCV+ WDP+ LGS++LKSLILY++G R  VI
Sbjct: 64  KSIQAKILEKYGTHKPESPVLKIVNVTQTSCVLAWDPLKLGSAKLKSLILYRKGIRSMVI 123

Query: 122 TPGSNRDGTTDNNSLKISGLSVDFEYEFKLLLNTTSGKFWSNTLKVHTHKMTDMSGITAC 181
            P   +  TT     KISGLSVD  YEF+L L TTSG  WS  + + THKMTDMSGIT C
Sbjct: 124 -PNPFKVTTT-----KISGLSVDTPYEFQLKLITTSGTLWSEKVILRTHKMTDMSGITVC 177

Query: 182 VGPNTKLGDNISLDQIKRSLQNIGAKPLQDHVTLETTHFIATEFEDSEGVTSDEELAHAR 241
           +GP   L + IS  QI + L +IGA+PLQ HV ++TTHF+  + ++ E   S+EEL  A+
Sbjct: 178 LGPLDPLKE-ISDLQISQCLSHIGARPLQRHVAIDTTHFVCNDLDNEE---SNEELIRAK 233

Query: 242 DNNIPIVRPEWIRACELEKRIVGVRDFYLDSDPSNFLNYKFTAAAPSSGDALKETAPERE 301
            NNIPIVRPEW+RACE+EKRIVGVR FYLD+D S   NY F           KE  P  E
Sbjct: 234 HNNIPIVRPEWVRACEVEKRIVGVRGFYLDADQSILKNYTFPPVNEEELSYSKENEPVAE 293

Query: 302 -------------PEQATSPDGTETTAKXXXXXXXXXXXXTQPAPEENAP 338
                         EQ  SP+  E+               T P      P
Sbjct: 294 VADENKMPEDTTDVEQVASPNDNESNPSEAKEQGEKSGHETAPVSPVEDP 343


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.308    0.126    0.351 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,341,956
Number of Sequences: 60738
Number of extensions: 1021603
Number of successful extensions: 2554
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2549
Number of HSP's gapped (non-prelim): 2
length of query: 522
length of database: 30,389,216
effective HSP length: 111
effective length of query: 411
effective length of database: 23,647,298
effective search space: 9719039478
effective search space used: 9719039478
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)