ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV1343.1 good J KOG3434 Translation, ribosomal structure and biogenesis 60S ribosomal protein L22
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV1343.1 447495 447752 86
(86 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR061w [J] KOG3434 60S ribosomal protein L22 110 3e-25
YFL034c-a [J] KOG3434 60S ribosomal protein L22 99 8e-22
SPAC11E3.15 [J] KOG3434 60S ribosomal protein L22 59 9e-10
Hs20471589 [J] KOG3434 60S ribosomal protein L22 53 8e-08
Hs4506613 [J] KOG3434 60S ribosomal protein L22 51 2e-07
Hs22044239 [J] KOG3434 60S ribosomal protein L22 50 4e-07
Hs22041078 [J] KOG3434 60S ribosomal protein L22 49 2e-06
7290080 [J] KOG3434 60S ribosomal protein L22 47 6e-06
Hs22058880 [J] KOG3434 60S ribosomal protein L22 44 5e-05
CE04102 [J] KOG3434 60S ribosomal protein L22 42 1e-04
Hs22046519 [J] KOG3434 60S ribosomal protein L22 42 1e-04
At3g05560 [J] KOG3434 60S ribosomal protein L22 41 3e-04
At5g27770 [J] KOG3434 60S ribosomal protein L22 40 7e-04
7291548 [J] KOG3434 60S ribosomal protein L22 33 0.053
Hs22041095 [J] KOG3434 60S ribosomal protein L22 31 0.34
Hs20533438_1 [J] KOG3434 60S ribosomal protein L22 29 0.99
CE25803 [T] KOG3513 Neural cell adhesion molecule L1 26 8.4
>YLR061w [J] KOG3434 60S ribosomal protein L22
Length = 121
Score = 110 bits (275), Expect = 3e-25
Identities = 53/76 (69%), Positives = 59/76 (76%)
Query: 1 MIDHIKVEGHVGNLGQAITVEEDGSVVTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRFV 60
+IDHIKVEG VGNLG A+TV EDG+VVT+VST KFSG NQLRDWIRFV
Sbjct: 37 LIDHIKVEGAVGNLGNAVTVTEDGTVVTVVSTAKFSGKYLKYLTKKYLKKNQLRDWIRFV 96
Query: 61 STKTNEYKLAFYQITP 76
STKTNEY+LAFYQ+TP
Sbjct: 97 STKTNEYRLAFYQVTP 112
>YFL034c-a [J] KOG3434 60S ribosomal protein L22
Length = 122
Score = 99.4 bits (246), Expect = 8e-22
Identities = 47/76 (61%), Positives = 55/76 (71%)
Query: 1 MIDHIKVEGHVGNLGQAITVEEDGSVVTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRFV 60
+IDHIKV+G VGNLG AI V EDGS+VT+VS+ KFSG NQLRDWIRFV
Sbjct: 37 LIDHIKVDGAVGNLGNAIEVTEDGSIVTVVSSAKFSGKYLKYLTKKYLKKNQLRDWIRFV 96
Query: 61 STKTNEYKLAFYQITP 76
S + N+YKL FYQ+TP
Sbjct: 97 SIRQNQYKLVFYQVTP 112
>SPAC11E3.15 [J] KOG3434 60S ribosomal protein L22
Length = 117
Score = 59.3 bits (142), Expect = 9e-10
Identities = 28/75 (37%), Positives = 42/75 (55%), Gaps = 1/75 (1%)
Query: 1 MIDHIKVEGHVGNLGQAITVEEDGSV-VTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRF 59
+ID IKV+G GNLG ++ V +GS + +++ FSG + LRDW+R
Sbjct: 34 LIDRIKVDGKTGNLGSSVVVSREGSSKIAVIAHIDFSGRYLKYLTKKFLKKHSLRDWLRV 93
Query: 60 VSTKTNEYKLAFYQI 74
VSTK Y+L +Y +
Sbjct: 94 VSTKKGVYELRYYNV 108
>Hs20471589 [J] KOG3434 60S ribosomal protein L22
Length = 182
Score = 52.8 bits (125), Expect = 8e-08
Identities = 24/73 (32%), Positives = 39/73 (52%)
Query: 3 DHIKVEGHVGNLGQAITVEEDGSVVTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRFVST 62
+ +KV G GNLG + +E + +T+VS +FS N LRDW+R V++
Sbjct: 100 EKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVAS 159
Query: 63 KTNEYKLAFYQIT 75
Y+L ++QI+
Sbjct: 160 DKETYELRYFQIS 172
>Hs4506613 [J] KOG3434 60S ribosomal protein L22
Length = 128
Score = 51.2 bits (121), Expect = 2e-07
Identities = 26/73 (35%), Positives = 36/73 (48%), Gaps = 1/73 (1%)
Query: 3 DHIKVEGHVGNLGQAI-TVEEDGSVVTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRFVS 61
+ IKV G GNLG + T+E S +T+ S FS N LRDW+R V+
Sbjct: 45 ERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVA 104
Query: 62 TKTNEYKLAFYQI 74
Y+L ++QI
Sbjct: 105 NSKESYELRYFQI 117
>Hs22044239 [J] KOG3434 60S ribosomal protein L22
Length = 141
Score = 50.4 bits (119), Expect = 4e-07
Identities = 26/73 (35%), Positives = 36/73 (48%), Gaps = 1/73 (1%)
Query: 3 DHIKVEGHVGNLGQAI-TVEEDGSVVTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRFVS 61
+ IKV G VGNLG + T+E+ S +T+ S FS N L DW+ V+
Sbjct: 58 ERIKVNGKVGNLGGGVVTIEKSKSKITVTSKVPFSKRYLIYLTKKYLKKNNLHDWLCIVA 117
Query: 62 TKTNEYKLAFYQI 74
YKL ++QI
Sbjct: 118 NSKESYKLCYFQI 130
>Hs22041078 [J] KOG3434 60S ribosomal protein L22
Length = 150
Score = 48.5 bits (114), Expect = 2e-06
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 3 DHIKVEGHVGNLGQAI-TVEEDGSVVTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRFVS 61
+ IKV G GNLG+ + TV+ S +T+ S FS N LRDW+ V+
Sbjct: 67 ERIKVNGKAGNLGEGVVTVKRSKSKITVTSKVHFSKRYLKYLTKKYLKKNNLRDWLCIVA 126
Query: 62 TKTNEYKLAFYQI 74
YKL +QI
Sbjct: 127 NSKESYKLRSFQI 139
>7290080 [J] KOG3434 60S ribosomal protein L22
Length = 299
Score = 46.6 bits (109), Expect = 6e-06
Identities = 23/71 (32%), Positives = 35/71 (48%)
Query: 5 IKVEGHVGNLGQAITVEEDGSVVTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRFVSTKT 64
+KV G V NLG +T E + + S FS N LRDWIR V+ +
Sbjct: 219 LKVNGKVNNLGNNVTFERSKLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEK 278
Query: 65 NEYKLAFYQIT 75
+ Y+L +++I+
Sbjct: 279 DSYELRYFRIS 289
>Hs22058880 [J] KOG3434 60S ribosomal protein L22
Length = 94
Score = 43.5 bits (101), Expect = 5e-05
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 3 DHIKVEGHVGNLGQAI-TVEEDGSVVTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRFVS 61
+ IK+ G GN G + T+E S ++ S FS N L DW+R V+
Sbjct: 12 ERIKMNGKAGNFGGGVVTIEGSKSKTSVTSKLPFSNRYLKYLTKKYLKKNNLHDWLRVVA 71
Query: 62 TKTNEYKLAFYQI 74
Y+L ++QI
Sbjct: 72 NSKQSYELRYFQI 84
>CE04102 [J] KOG3434 60S ribosomal protein L22
Length = 130
Score = 42.4 bits (98), Expect = 1e-04
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 3 DHIKVEGHVGNLG-QAITVEEDGSVVTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRFVS 61
+ IKV G G+L + VE S V++VS FS N LRDW+R V+
Sbjct: 47 EKIKVNGKTGHLAANNVKVEVAKSKVSVVSEVPFSKRYLKYLTKKYLKRNSLRDWLRVVA 106
Query: 62 TKTNEYKLAFYQI 74
N Y++ ++ I
Sbjct: 107 VNKNTYEVRYFHI 119
>Hs22046519 [J] KOG3434 60S ribosomal protein L22
Length = 126
Score = 42.0 bits (97), Expect = 1e-04
Identities = 24/73 (32%), Positives = 34/73 (45%), Gaps = 2/73 (2%)
Query: 3 DHIKVEGHVGNLGQAI-TVEEDGSVVTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRFVS 61
+ IKV G NLG + T+E S + + S FS N LRDW+ V+
Sbjct: 45 ERIKVNGKAENLGGGMATIERSKSKINVTSEVPFS-KRYFKYLTKTYMKNNLRDWLLLVT 103
Query: 62 TKTNEYKLAFYQI 74
+ YKL ++QI
Sbjct: 104 NSKDSYKLCYFQI 116
>At3g05560 [J] KOG3434 60S ribosomal protein L22
Length = 124
Score = 41.2 bits (95), Expect = 3e-04
Identities = 20/74 (27%), Positives = 37/74 (49%), Gaps = 2/74 (2%)
Query: 3 DHIKVEGHVGNLGQAITVEEDGSVVTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRFVST 62
+ IKV G G LG ++T+ + S +T+ + +FS + +RDW+R ++
Sbjct: 42 ERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAA 101
Query: 63 K--TNEYKLAFYQI 74
N Y+L ++ I
Sbjct: 102 NKDRNLYELRYFNI 115
>At5g27770 [J] KOG3434 60S ribosomal protein L22
Length = 124
Score = 39.7 bits (91), Expect = 7e-04
Identities = 19/74 (25%), Positives = 37/74 (49%), Gaps = 2/74 (2%)
Query: 3 DHIKVEGHVGNLGQAITVEEDGSVVTIVSTTKFSGXXXXXXXXXXXXXNQLRDWIRFVST 62
+ IKV G G LG ++++ + S +T+ + +FS + +RDW+R ++
Sbjct: 42 ERIKVGGKAGALGDSVSITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAA 101
Query: 63 K--TNEYKLAFYQI 74
N Y+L ++ I
Sbjct: 102 NKDRNLYELRYFNI 115
>7291548 [J] KOG3434 60S ribosomal protein L22
Length = 312
Score = 33.5 bits (75), Expect = 0.053
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 4 HIKVEGHVGNLGQAITVEEDGSVVTIV-STTKFSGXXXXXXXXXXXXXNQLRDWIRFVST 62
HIK++ + L +T E + I+ S FS LRDW+R VST
Sbjct: 219 HIKIKNKLNQLKDQVTFERTKNFSLIIHSGVHFSKRYFKYLTKRYLKKVSLRDWLRVVST 278
Query: 63 KTNEYKLAFYQI 74
+ + + +++I
Sbjct: 279 AKDTFAMTYFKI 290
>Hs22041095 [J] KOG3434 60S ribosomal protein L22
Length = 326
Score = 30.8 bits (68), Expect = 0.34
Identities = 15/35 (42%), Positives = 21/35 (59%), Gaps = 1/35 (2%)
Query: 3 DHIKVEGHVGNLGQ-AITVEEDGSVVTIVSTTKFS 36
+ IKV G GNLG+ +TV+ S +T+ S FS
Sbjct: 268 ERIKVNGKAGNLGEGVVTVKRSKSKITVTSKVHFS 302
>Hs20533438_1 [J] KOG3434 60S ribosomal protein L22
Length = 65
Score = 29.3 bits (64), Expect = 0.99
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 3 DHIKVEGHVGNL-GQAITVEEDGSVVTIVS 31
+ IKV G VGNL G +T+E+ S +T+ S
Sbjct: 32 ERIKVNGKVGNLGGGVVTIEKSKSKITVTS 61
>CE25803 [T] KOG3513 Neural cell adhesion molecule L1
Length = 1227
Score = 26.2 bits (56), Expect = 8.4
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 10 HVGNLGQAITVEEDGS--VVTIVSTTKF 35
HVG +GQA+ EDG+ ++TI ++ F
Sbjct: 122 HVGGMGQALNRTEDGNYKIITINPSSHF 149
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.134 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,291,703
Number of Sequences: 60738
Number of extensions: 65269
Number of successful extensions: 123
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 105
Number of HSP's gapped (non-prelim): 17
length of query: 86
length of database: 30,389,216
effective HSP length: 62
effective length of query: 24
effective length of database: 26,623,460
effective search space: 638963040
effective search space used: 638963040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)