ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV1375 good S KOG3269 Function unknown Predicted membrane protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV1375 460971 460429 -181
(181 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR065c [S] KOG3269 Predicted membrane protein 111 5e-25
At2g23940 [S] KOG3269 Predicted membrane protein 55 5e-08
At4g30500 [S] KOG3269 Predicted membrane protein 49 4e-06
>YLR065c [S] KOG3269 Predicted membrane protein
Length = 181
Score = 111 bits (278), Expect = 5e-25
Identities = 62/167 (37%), Positives = 101/167 (60%), Gaps = 12/167 (7%)
Query: 20 LHVLVVAILSLTLLRKWFSNGLI--STLKPILFNVPMLLCLYILERTGRPKYEVSNAAHG 77
L+ V L + ++R + S + +K + NVPM + LYI+ +G+PKY+ +
Sbjct: 20 LYKQVSLFLGMAIVRLFISRKVTIGQWIKLVALNVPMFVALYIIVLSGKPKYDGN----- 74
Query: 78 KYKLVNEGFDL-ESGGLTEYMKDIVYVSLFCNLGTVFFNTMKWWFLVLVCPAFIFYKLYY 136
++V +G DL ++ L Y D++Y+SLF N+G + F T K+W+ +L+CP + YKLY
Sbjct: 75 --RVVKQGIDLNDNTNLISYFFDLIYLSLFGNIGIIAFRTFKFWWCLLLCPIYAGYKLYG 132
Query: 137 LKQQYFPGASASKADLAETTPAE-PSKSKRQLKREKRGD-KSQVRYR 181
LK + PGA ++AD E SKSKRQ+KRE+RG+ S+++Y+
Sbjct: 133 LKNMFMPGAQQTQADNRSKNANEGQSKSKRQMKRERRGETDSKIKYK 179
>At2g23940 [S] KOG3269 Predicted membrane protein
Length = 173
Score = 55.1 bits (131), Expect = 5e-08
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 80 KLVNEGFDLESGGLTEYMKDIVYVSLFCNLGTVFFNTMKWWFLVLVCPAFIFYKLYYLKQ 139
+L++ GFD+ +GG+ Y+ D++Y++ F L ++ T K+W+ LV PAF YK L +
Sbjct: 78 ELIDGGFDMTTGGICGYLHDVIYITCFVQLASII--TGKFWYTYLVIPAFGVYKASGLIR 135
Query: 140 QYFPGASASKADLAETTPAEPSKSKRQLKREKRGDKSQV 178
+ S + E S+ KR+ K E++ + QV
Sbjct: 136 GFMSQGSEGGVE------DEKSRKKRE-KMERKASRGQV 167
>At4g30500 [S] KOG3269 Predicted membrane protein
Length = 217
Score = 48.9 bits (115), Expect = 4e-06
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 20 LHVLVVAILSLTLLRKWFSNGLISTLKPILFNVPMLLCLYILERTGRPKYEVSNAAHGKY 79
L+VLV I+S + W N + L + + +P L L + +P VS+A
Sbjct: 74 LYVLVRVIISHSS-HTW-KNWIGLVLTSLGYGIPYKL----LHQMAKPS--VSDAG---- 121
Query: 80 KLVNEGFDLESGGLTEYMKDIVYVSLFCNLGTVFFNTMKWWFLVLVCPAFIFYKLYYLKQ 139
+L++ GFD+ + G+ Y+ D++Y++ F +G++ + K+W+ LV PAF YK L +
Sbjct: 122 ELLDGGFDMSTPGMCGYLHDVLYITCFVQVGSII--SGKFWYAYLVIPAFGAYKASGLIK 179
Query: 140 QYFPGASASKADLAETTPAEPSKSKRQLKREKRGDKSQV 178
S + E ++ KR+ K E++ + QV
Sbjct: 180 GLLSHGSEGGVE------DEKTRKKRE-KMERKASRGQV 211
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.325 0.140 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,655,654
Number of Sequences: 60738
Number of extensions: 394203
Number of successful extensions: 1387
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1382
Number of HSP's gapped (non-prelim): 3
length of query: 181
length of database: 30,389,216
effective HSP length: 100
effective length of query: 81
effective length of database: 24,315,416
effective search space: 1969548696
effective search space used: 1969548696
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)