ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV1504 normal O KOG1752 Posttranslational modification, protein turnover, chaperones Glutaredoxin and related proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV1504 512611 513453 281
(281 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL156c_2 [O] KOG1752 Glutaredoxin and related proteins 114 1e-25
YDL010w [O] KOG1752 Glutaredoxin and related proteins 74 2e-13
YBR014c [O] KOG1752 Glutaredoxin and related proteins 50 5e-06
>YPL156c_2 [O] KOG1752 Glutaredoxin and related proteins
Length = 133
Score = 114 bits (286), Expect = 1e-25
Identities = 60/136 (44%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
Query: 146 ERFSPSLGFQQILNTSPVILFIKSSEKNSVDLKNVLTLEYTFSPEIIVVDLDKHQFGDSM 205
++F P F I+ TSP +LFIKSS+ +S+ LKN+L E+ SPE+ VDL+KH G +
Sbjct: 1 KKFDPRTDFLDIIRTSPAVLFIKSSQADSIFLKNLLQREFEISPELATVDLEKHSHGYEL 60
Query: 206 QEYIQLNRLATYKSNYGESSKSPDVPYLFINGVSLINKSLKDDILNKHADGSLLSKLRHV 265
++YI+ N+L S ES +S PYLF+NG+S+IN+ + DI+ H+ G LL L+
Sbjct: 61 EKYIKQNKLNIDTSAALESIQS---PYLFLNGISVINRGMVRDIIEPHSKGLLLPLLKSE 117
Query: 266 ADSKVSISKVDIPSNS 281
A + + K DIPSNS
Sbjct: 118 ARGNLLVEKKDIPSNS 133
>YDL010w [O] KOG1752 Glutaredoxin and related proteins
Length = 231
Score = 73.9 bits (180), Expect = 2e-13
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 15/134 (11%)
Query: 148 FSPSLGFQQILNTSPVILFIKSSEKNSVDLKNVLTLEYTFSPEIIVVDLDKHQFGDSMQE 207
F+ + IL+ SP+I+F KS+ S +K +L EY F P +++LDKH G+ +QE
Sbjct: 113 FNVQKEYSLILDLSPIIIFSKSTCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQE 172
Query: 208 YIQLNRLATYKSNYGESSKSPDVPYLFINGVSLINKSLKDDILNKHADGSLLSKLRHVAD 267
YI +L T + VP L +NGVS + ++I H G LL L+ +D
Sbjct: 173 YI---KLVTGRGT---------VPNLLVNGVS---RGGNEEIKKLHTQGKLLESLQVWSD 217
Query: 268 SKVSISKVDIPSNS 281
K S+ + + PSN+
Sbjct: 218 GKFSVEQREKPSNN 231
>YBR014c [O] KOG1752 Glutaredoxin and related proteins
Length = 203
Score = 49.7 bits (117), Expect = 5e-06
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 148 FSPSLGFQQILNTSPVILFIKSSEKNSVDLKNVLTLEYTFSPEIIVVDLDKHQFGDSMQE 207
F + + +I+ SP+I+F K+ S LK +LT YTFSP VV+LD+H+ +Q+
Sbjct: 85 FDAAAEYNKIMEQSPMIVFSKTGCPYSKKLKALLTNSYTFSPSYYVVELDRHEHTKELQD 144
Query: 208 YIQLNRLATYKSNYGESSKSPDVPYLFINGVSLINKSLKDDILNKHADGSLLSKLRHVAD 267
I+ + + VP + I G S + +I H + LL + +D
Sbjct: 145 QIE------------KVTGRRTVPNVIIGGTS---RGGYTEIAELHKNDELLDSFKKWSD 189
Query: 268 SKVSI 272
++
Sbjct: 190 GAFTV 194
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.311 0.130 0.344
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,130,992
Number of Sequences: 60738
Number of extensions: 463150
Number of successful extensions: 804
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 799
Number of HSP's gapped (non-prelim): 3
length of query: 281
length of database: 30,389,216
effective HSP length: 105
effective length of query: 176
effective length of database: 24,011,726
effective search space: 4226063776
effective search space used: 4226063776
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)