ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV1557 good O KOG1439 Posttranslational modification, protein turnover, chaperones RAB proteins geranylgeranyltransferase component A (RAB escort protein)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV1557 535472 533643 -610
(610 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR370c [O] KOG1439 RAB proteins geranylgeranyltransferase compo... 799 0.0
SPBC15C4.03 [O] KOG1439 RAB proteins geranylgeranyltransferase c... 183 8e-46
At3g06540 [TU] KOG4405 GDP dissociation inhibitor 143 7e-34
7302459 [TU] KOG4405 GDP dissociation inhibitor 138 3e-32
CE27306 [TU] KOG4405 GDP dissociation inhibitor 128 3e-29
YER136w [O] KOG1439 RAB proteins geranylgeranyltransferase compo... 123 9e-28
Hs9966761 [TU] KOG4405 GDP dissociation inhibitor 119 1e-26
7297522 [O] KOG1439 RAB proteins geranylgeranyltransferase compo... 117 4e-26
Hs4502811 [TU] KOG4405 GDP dissociation inhibitor 115 2e-25
Hs4503971 [O] KOG1439 RAB proteins geranylgeranyltransferase com... 106 1e-22
SPAC22H10.12c [O] KOG1439 RAB proteins geranylgeranyltransferase... 105 2e-22
Hs6598323 [O] KOG1439 RAB proteins geranylgeranyltransferase com... 103 6e-22
CE14944 [O] KOG1439 RAB proteins geranylgeranyltransferase compo... 102 2e-21
At5g09550 [O] KOG1439 RAB proteins geranylgeranyltransferase com... 97 7e-20
At2g44100 [O] KOG1439 RAB proteins geranylgeranyltransferase com... 97 7e-20
At3g59920 [O] KOG1439 RAB proteins geranylgeranyltransferase com... 96 1e-19
ECU02g1410 [O] KOG1439 RAB proteins geranylgeranyltransferase co... 91 7e-18
>YOR370c [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 603
Score = 799 bits (2064), Expect = 0.0
Identities = 386/559 (69%), Positives = 471/559 (84%), Gaps = 9/559 (1%)
Query: 1 MLNAERRPSMAERRPSFFSPGPDGSLQSTSLVVPHLAGIEDPLPETTPEQVDVLIAGTGL 60
ML+ ERRPSMAERRPSFFS + S LVVPHLAGIEDPLP TTP++VDVLIAGTG+
Sbjct: 1 MLSPERRPSMAERRPSFFSFTQNPS----PLVVPHLAGIEDPLPATTPDKVDVLIAGTGM 56
Query: 61 IESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTNQVNEDSDETRFYKDARLY 120
+ES+L+A+LAWQGS VLHID N+YYGDT AT+T+DQ+K W N+VNE S YK+A+LY
Sbjct: 57 VESVLAAALAWQGSNVLHIDKNDYYGDTSATLTVDQIKRWVNEVNEGS--VSCYKNAKLY 114
Query: 121 VSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLIKSRVHQYLEFQSLSNFHTFENDNFE 180
VS L+ GK+ S++FGIDLSPKILFA+SDLLS+LIKSRVHQYLEFQSLSNFHT+END FE
Sbjct: 115 VSTLIGSGKYSSRDFGIDLSPKILFAKSDLLSILIKSRVHQYLEFQSLSNFHTYENDCFE 174
Query: 181 RLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEWEKSTDIWKPYAEQPLASFLVDKFKLEK 240
+LTN+KQEIFTDQ LPLMTKRNLM+FIKFVL WE T+IW+PYAE+ ++ FL +KFKLEK
Sbjct: 175 KLTNTKQEIFTDQNLPLMTKRNLMKFIKFVLNWEAQTEIWQPYAERTMSDFLGEKFKLEK 234
Query: 241 PQVFELIFSIGMCRNLDTKTPEGLARIRRFLTSFDVYGPFPVLYSKYGGPGELSQGFCRS 300
PQVFELIFSIG+C +L+ K PE L RIRR+LTSFDVYGPFP L SKYGGPGELSQGFCRS
Sbjct: 235 PQVFELIFSIGLCYDLNVKVPEALQRIRRYLTSFDVYGPFPALCSKYGGPGELSQGFCRS 294
Query: 301 AAVAGATYKLNHKLVSYDPNSQTAVFEDGSRVRVTEKVVASPTQHPQNGGNIPPQKYEVH 360
AAV GATYKLN KLVS++P ++ A F+DGS+V V+EKV+ SPTQ P++ ++P Q+Y+VH
Sbjct: 295 AAVGGATYKLNEKLVSFNPTTKVATFQDGSKVEVSEKVIISPTQAPKDSKHVPQQQYQVH 354
Query: 361 RLTCVVEKDCSQWFSEGESAAMVVFPPDSLKTGNVEAVQVVILGSGAEVCEPGTCVWYFS 420
RLTC+VE C++WF+EGESAAMVVFPP SLK+GN E VQ ILG+G+E+C GT VWY S
Sbjct: 355 RLTCIVENPCTEWFNEGESAAMVVFPPGSLKSGNKEVVQAFILGAGSEICPEGTIVWYLS 414
Query: 421 TTQAGPRGDLDLDAALEAMINSILRESSD-IPNEDELVQINSNGVPLVNSVKLGQSFKEL 479
TT+ GPR ++D+DAALEAM ++LRESS + N++E+VQ+ NG +VNSVKLGQSFKE
Sbjct: 415 TTEQGPRAEMDIDAALEAMEMALLRESSSGLENDEEIVQLTGNGHTIVNSVKLGQSFKEY 474
Query: 480 ISKERVNFIMKLYYTQYTSTPPFDIVTPDLFDLNK--SKEFIPGASDNGILYTSLPSGEV 537
+ +ER+ F+ KLYYTQYTSTPPF +V FD+N+ K++IPGASDNG++YT++PS E+
Sbjct: 475 VPRERLQFLFKLYYTQYTSTPPFGVVNSSFFDVNQDLEKKYIPGASDNGVIYTTMPSAEI 534
Query: 538 SYDEVITAAKFLYEKIVGS 556
SYDEV+TAAK LYEKIVGS
Sbjct: 535 SYDEVVTAAKVLYEKIVGS 553
>SPBC15C4.03 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 459
Score = 183 bits (464), Expect = 8e-46
Identities = 123/397 (30%), Positives = 210/397 (51%), Gaps = 31/397 (7%)
Query: 48 PEQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTNQVNED 107
P DV+I GT L SILSA+L+W VLHID N++YG+ ++T+ L+ ++ +
Sbjct: 4 PNSYDVIIVGTNLRNSILSAALSWANQRVLHIDENSFYGEIDGSLTLRDLEQINEKIKK- 62
Query: 108 SDETRFYKDARLYVSGLVA-QGKF-------KSKNFGIDLSPKILFAQSDLLSVLIKSRV 159
D ++ D + S L + +F K+K I P+ +FA S+L+ +L ++++
Sbjct: 63 VDSSQILNDNGSHKSPLKRFEVQFLNKDLIPKNKGSVIQFHPQEIFASSELVKLLSETKI 122
Query: 160 HQYLEFQSLSNFHTF-ENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFV--LEWEKS 216
++YL + +F N+ + ++ S+ +IF ++ L L +KR +MRF+KFV + E++
Sbjct: 123 YKYLLLKPARSFRLLTSNEEWIKVPESRADIFNNKNLSLASKRIVMRFMKFVSNIADEQN 182
Query: 217 TDIWKPYAEQPLASFLVDKFKLEKPQVFELIFSIGMCRNL--DTKTPEGLARIRRFLTSF 274
++ K + +P FL + F+L +I+ G+C++L D T + L + ++ SF
Sbjct: 183 QNLVKEWESKPFYKFLEEVFQLSGAIEESIIY--GLCQSLSKDIPTKDALDTVLKYFHSF 240
Query: 275 DVYGPFPVLYSKYGGPGELSQGFCRSAAVAGATYKLNHKLVSYDPNSQTAVFEDGSRVRV 334
+YG + L + YG EL QGFCRS+AV G T+ L + D + V +DGS +
Sbjct: 241 GMYGDYSYLLAMYGTGSELCQGFCRSSAVMGGTFMLGQAIDKIDESK--IVLKDGSTLS- 297
Query: 335 TEKVVASPTQHPQNGGNIPPQKYEVHRLTCVVEKDCSQWFSE-----GESAAMVVFPPDS 389
+K+V+S + G +P Q+ + L +V+ DC Q F E A+++ F P S
Sbjct: 298 AKKIVSSVDE-----GKLPHQQIQQRYL--LVKGDCQQLFQEDGFFAALDASLIHFSPFS 350
Query: 390 LKTGNVEAVQVVILGSGAEVCEPGTCVWYFSTTQAGP 426
+ +VQ + GSG+ C G C+WY T P
Sbjct: 351 ISENFGNSVQAKLYGSGSGDCPEGYCIWYLKTLNDSP 387
>At3g06540 [TU] KOG4405 GDP dissociation inhibitor
Length = 536
Score = 143 bits (361), Expect = 7e-34
Identities = 147/569 (25%), Positives = 253/569 (43%), Gaps = 119/569 (20%)
Query: 42 PLPETTPEQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNW- 100
P P P D+++ GTG+ ES+L+A+ + GS+VLH+D N +YG +A++++ L ++
Sbjct: 6 PYPPLDPSNYDLIVVGTGVSESVLAAAASSSGSSVLHLDPNPFYGSHFASLSLPDLTSFL 65
Query: 101 -TNQVNED----------SDETRFYK----DARLYVSGLVAQGKFK-----SKNFGIDLS 140
+N V+ S+ F + LY S ++ + + S+ F +DL+
Sbjct: 66 HSNSVSPPPSPSSPPLPPSNNHDFISVDLVNRSLYSSVEISSFESEILEEHSRRFNVDLA 125
Query: 141 -PKILFAQSDLLSVLIKSRVHQYLEFQSL-SNFHTFENDNFERLTNSKQEIFTDQTLPLM 198
P+++F + +++++KS + Y+EF+S+ ++F + + +S+ IF D++L L+
Sbjct: 126 GPRVVFCADESINLMLKSGANNYVEFKSIDASFVGDSSGELRNVPDSRAAIFKDKSLTLL 185
Query: 199 TKRNLMRFIKFVLEW-----EKSTDIWKPYAEQPLASFLVD---KFKLEKPQVFELIFSI 250
K LM+F K V EK +E+ + S VD K +L ++++I
Sbjct: 186 EKNQLMKFFKLVQSHLASSTEKDDSTTVKISEEDMESPFVDFLSKMRLPPKIKSIILYAI 245
Query: 251 GM----------CRNLDTKTPEGLARIRRFLTSFDVYGPF--PVLYSKYGGPGELSQGFC 298
M CR+L KT EG+ R+ ++TS + ++Y YG GEL Q FC
Sbjct: 246 AMLDYDQDNTETCRHL-LKTKEGIDRLALYITSMGRFSNALGALIYPIYG-QGELPQAFC 303
Query: 299 RSAAVAGATYKLNHKLVSYDPNSQTAVFEDGSRVRVTEKVVASP--TQHPQNGGNIPPQK 356
R AAV G Y L + + + +K++ P T ++ ++ Q+
Sbjct: 304 RRAAVKGCIYVLRMPITAL----------------LLDKLILDPCVTVGLESLSSLTDQQ 347
Query: 357 YE-----VHRLTCVVEKDCSQWFSEGESAAMVVFPPDSLKTGNVEAVQVVILGSGAEVCE 411
E + R CV+ S A+VV+PP SL + A++V+ LGSG VC
Sbjct: 348 NETLSEKIARGVCVIRGSVKA----NVSNALVVYPPKSLFPEQLTAIRVLQLGSGLAVCP 403
Query: 412 PGTCVWYFSTTQAGPRGDLDLDAALEAMINSILRESSDIPNEDELVQINSNGVPLVNSVK 471
V Y ST D + A L AM N I S +P + + N +
Sbjct: 404 ADMHVLYLST--LCDNDDQGIKALLSAMSNLI---SLPVPENRQSDSVVENDTSETKPIL 458
Query: 472 LGQSF--KELISKERVNFIMKLYYTQYTSTPPFDIVTPDLFDLNKSKEFIPGASDNGILY 529
L ++ +EL+ E F G
Sbjct: 459 LWRALYVQELVKVENGEF--------------------------------------GGTI 480
Query: 530 TSLPS--GEVSYDEVITAAKFLYEKIVGS 556
+S+PS G ++Y+E++ +A LYEK++GS
Sbjct: 481 SSMPSPDGNLNYNEIVESAVKLYEKLMGS 509
>7302459 [TU] KOG4405 GDP dissociation inhibitor
Length = 511
Score = 138 bits (347), Expect = 3e-32
Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 22/319 (6%)
Query: 48 PEQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTNQVNED 107
PEQ D+++ GTG ES ++A+ + G +VLH+DSN YYGD W++ ++D L +Q E
Sbjct: 6 PEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVEP 65
Query: 108 ------------SDETRFYKDARLYVSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLI 155
S E DA+ + V KS+ F +DL P+IL+A +L+ +LI
Sbjct: 66 HSALRNARYTWHSMEKESETDAQSWNRDSVLA---KSRRFSLDLCPRILYAAGELVQLLI 122
Query: 156 KSRVHQYLEFQSLSNFHTFENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEW-- 213
KS + +Y EF+++ + N + S+ ++F +TL ++ KR LM+F+ ++
Sbjct: 123 KSNICRYAEFRAVDHVCMRHNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACNDYGE 182
Query: 214 EKSTDIWKPYAEQPLASFLVDKFKLEKPQVFELIFSIGMCRNLDTKTPEGLARIRRFLTS 273
+K + + + +L + EK ++ +I MC T EG+ R +RFL S
Sbjct: 183 DKCNEDSLEFRGRTFLEYLQAQRVTEKISSC-VMQAIAMC-GPSTSFEEGMQRTQRFLGS 240
Query: 274 FDVYGPFPVLYSKYGGPGELSQGFCRSAAVAGATYKLNHKL--VSYDPNSQTAVFEDGSR 331
YG P L+ Y G GEL Q FCR AV G Y L + ++ D NS + +
Sbjct: 241 LGRYGNTPFLFPMY-GCGELPQCFCRLCAVYGGIYCLKRAVDDIALDSNSNEFLLSSAGK 299
Query: 332 VRVTEKVVASPTQHPQNGG 350
+ VV++P P + G
Sbjct: 300 TLRAKNVVSAPGYTPVSKG 318
>CE27306 [TU] KOG4405 GDP dissociation inhibitor
Length = 510
Score = 128 bits (321), Expect = 3e-29
Identities = 106/349 (30%), Positives = 161/349 (45%), Gaps = 49/349 (14%)
Query: 43 LPETTPEQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTN 102
+ E PE VDV++ GTGL E+IL+++ A G +VLH+D N YYG W++ T+ + T
Sbjct: 1 MDEKLPESVDVVVLGTGLPEAILASACARAGLSVLHLDRNEYYGGDWSSFTMSMVHEVTE 60
Query: 103 QVNEDSDETRFYKDARLYVSG------------------LVAQGKFKSK----------- 133
+ D + K + L + +GK + K
Sbjct: 61 NQVKKLDSSEISKLSELLTENEQLIELGNREIVENIEMTWIPRGKDEEKPMKTQLEEASQ 120
Query: 134 --NFGIDLSPKILFAQSDLLSVLIKSRVHQYLEFQSLSNFHTFENDNFER------LTNS 185
F IDL PKIL ++ ++ L S+V Y EF+ L N + E + S
Sbjct: 121 MRRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFK-LVNRQLCPTETPEAGITLNPVPCS 179
Query: 186 KQEIFTDQTLPLMTKRNLMRFIKFVLEW-----EKSTDIWKPYAEQPLASFLVDKFKLEK 240
K EIF L ++ KR LM+FI F +W E+ + +A++P + FL ++ + K
Sbjct: 180 KGEIFQSNALSILEKRALMKFITFCTQWSTKDTEEGRKLLAEHADRPFSEFL-EQMGVGK 238
Query: 241 PQVFELIFSIGMCRNLDTKTPEGLARIRRFLTSFDVYGPFPVLYSKYGGPGELSQGFCRS 300
+I +IG+ + T G+ +F+ S +GP P L+ Y G GELSQ FCR
Sbjct: 239 TLQSFIINTIGILQQRPT-AMTGMLASCQFMDSVGHFGPSPFLFPLY-GCGELSQCFCRL 296
Query: 301 AAVAGATYKLNH--KLVSYDPNSQTAVFEDGSRVRVTEKVVASPTQHPQ 347
AAV G+ Y L + + TAV +G RV +V SP P+
Sbjct: 297 AAVFGSLYCLGRPVQAIVKKDGKITAVIANGDRVN-CRYIVMSPRFVPE 344
>YER136w [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 451
Score = 123 bits (308), Expect = 9e-28
Identities = 107/417 (25%), Positives = 176/417 (41%), Gaps = 58/417 (13%)
Query: 45 ETTPEQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQL--KNWTN 102
ET DV++ GTG+ E ILS L+ G VLHID ++YG A++T+ QL K N
Sbjct: 4 ETIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQN 63
Query: 103 QVNEDSDETRFYKDARLYVSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLIKSRVHQY 162
++++ E++F KD +++ +DL PK L A +L ++LI + V +Y
Sbjct: 64 PISKEERESKFGKD----------------RDWNVDLIPKFLMANGELTNILIHTDVTRY 107
Query: 163 LEFQSLSNFHTFENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEWEKSTDIWKP 222
++F+ +S + F+ ++ ++ E + + + KR + +F LEW S
Sbjct: 108 VDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKF----LEWISS------ 157
Query: 223 YAEQPLASFLVDKFKLEKPQVFELIFSIGMCRN-----------------LDTKTPEGLA 265
Y E L++ L+K + E+ + G+ + L
Sbjct: 158 YKEDDLSTH--QGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFE 215
Query: 266 RIRRFLTSFDVYGPFPVLYSKYGGPGELSQGFCRSAAVAGATYKLNHKLVSYDPNSQTAV 325
RI + S YG P LY Y G GEL QGF R +A+ G TY L+ + T
Sbjct: 216 RILLYCQSVARYGKSPYLYPMY-GLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGK 274
Query: 326 FEDGSRVRVTEK---VVASPTQHPQNGGNIPPQKYEVHRLTCVVEKDCSQWFSEGESAAM 382
FE T K V+A PT P+ V R C++ + +
Sbjct: 275 FEGVKTKLGTFKAPLVIADPTYFPE---KCKSTGQRVIRAICILNHPVPN--TSNADSLQ 329
Query: 383 VVFPPDSLKTGNVEAVQVVILGSGAEVCEPGTCVWYFSTTQAGPRGDLDLDAALEAM 439
++ P L G + V I+ VC G + ST + ++L+ A + +
Sbjct: 330 IIIPQSQL--GRKSDIYVAIVSDAHNVCSKGHYLAIISTIIETDKPHIELEPAFKLL 384
>Hs9966761 [TU] KOG4405 GDP dissociation inhibitor
Length = 653
Score = 119 bits (299), Expect = 1e-26
Identities = 94/354 (26%), Positives = 170/354 (47%), Gaps = 20/354 (5%)
Query: 109 DETRFYKDARLYVSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLIKSRVHQYLEFQSL 168
D T K R+ S ++ +G+ F IDL K+L+++ L+ +LIKS V +Y EF+++
Sbjct: 205 DTTEQPKKNRITYSQIIKEGR----RFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNI 260
Query: 169 SNFHTFENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEWEKSTDIWKPYAEQPL 228
+ F E++ S+ ++F + L ++ KR LM+F+ F +E+EK D +K Y E
Sbjct: 261 TRILAFREGRVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCMEYEKYPDEYKGYEEITF 320
Query: 229 ASFLVDKFKLEKPQVFELIFSIGMCRNLDTKTPEGLARIRRFLTSFDVYGPFPVLYSKYG 288
+L + KL + ++ SI M + T +GL + FL YG P L+ Y
Sbjct: 321 YEYLKTQ-KLTPNLQYIVMHSIAMTSETASSTIDGLKATKNFLHCLGRYGNTPFLFPLY- 378
Query: 289 GPGELSQGFCRSAAVAGATYKLNHK----LVSYDPNSQTAVFEDGSRVRVTEKVVASPTQ 344
G GEL Q FCR AV G Y L H +V + A+ + + ++E + +
Sbjct: 379 GQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAIIDQFGQRIISEHFLVEDSY 438
Query: 345 HPQNGGNIPPQKYEVHRLTCVVEKDCSQWFSEGESAAMVVFPPDSLKTGNVEAVQVVILG 404
P+N + Q ++ R + ++ + S+ + + + V P + T AV+V+ L
Sbjct: 439 FPENMCS-RVQYRQISRAVLITDRSVLKTDSDQQISILTV-PAEEPGT---FAVRVIELC 493
Query: 405 SGAEVCEPGTCVWYFSTTQAGPRGDLDLDAALEAMINSILRESSDIPNEDELVQ 458
S C GT + + + T + + LE+++ + +++ E+E V+
Sbjct: 494 SSTMTCMKGTYLVHLTCTSSKTARE-----DLESVVQKLFVPYTEMEIENEQVE 542
Score = 67.4 bits (163), Expect = 6e-11
Identities = 28/67 (41%), Positives = 44/67 (64%)
Query: 43 LPETTPEQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTN 102
+ +T P + DV++ GTGL ESI++A+ + G VLH+DS +YYG WA+ + L +W
Sbjct: 1 MADTLPSEFDVIVIGTGLPESIIAAACSRSGRRVLHVDSRSYYGGNWASFSFSGLLSWLK 60
Query: 103 QVNEDSD 109
+ E+SD
Sbjct: 61 EYQENSD 67
>7297522 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 443
Score = 117 bits (294), Expect = 4e-26
Identities = 99/398 (24%), Positives = 175/398 (43%), Gaps = 34/398 (8%)
Query: 49 EQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTNQVNEDS 108
E+ D ++ GTGL E ILS L+ G VLHID N YYG A++T L+ + +
Sbjct: 3 EEYDAIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASIT--PLEELFQRYGLEP 60
Query: 109 DETRFYKDARLYVSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLIKSRVHQYLEFQSL 168
RF + +++ +DL PK L A L+ +LI + V +YLEF+S+
Sbjct: 61 PGERF----------------GRGRDWNVDLIPKFLMANGQLVKLLIHTGVTRYLEFKSI 104
Query: 169 SNFHTFENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEW-EKSTDIWKPY-AEQ 226
+ ++ ++ ++E + + KR F+ +V ++ E WK + +
Sbjct: 105 EGSYVYKGGKIAKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFREDDPKTWKDFDPTK 164
Query: 227 PLASFLVDKFKLEKPQVFELIFSIGMCRN---LDTKTPEGLARIRRFLTSFDVYGPFPVL 283
L DKF L+K ++ + R+ L+ + RI+ + S YG P L
Sbjct: 165 ANMQGLYDKFGLDKNTQDFTGHALALFRDDEYLNEPAVNTIRRIKLYSDSLARYGKSPYL 224
Query: 284 YSKYGGPGELSQGFCRSAAVAGATYKLNHKL--VSYDPNSQTAVFEDGSRVRVTEKVVAS 341
Y Y G GEL QGF R +A+ G TY L+ + + + G V ++V
Sbjct: 225 YPMY-GLGELPQGFARLSAIYGGTYMLDKPIDEIVLGEGGKVVGVRSGEEVAKCKQVYCD 283
Query: 342 PTQHPQNGGNIPPQKYEVHRLTCVVEKDCSQWFSEGESAAMVVFPPDSLKTGNVEAVQVV 401
P+ P+ ++ +V R C+++ + +G S +++ + G + V
Sbjct: 284 PSYVPEK----VRKRGKVIRCICILDHPVAS-TKDGLSTQIII---PQKQVGRKSDIYVS 335
Query: 402 ILGSGAEVCEPGTCVWYFSTTQAGPRGDLDLDAALEAM 439
++ S +V G V STT ++++ L+ +
Sbjct: 336 LVSSTHQVAAKGWFVGMVSTTVETENPEVEIKPGLDLL 373
>Hs4502811 [TU] KOG4405 GDP dissociation inhibitor
Length = 656
Score = 115 bits (288), Expect = 2e-25
Identities = 96/388 (24%), Positives = 176/388 (44%), Gaps = 26/388 (6%)
Query: 79 IDSNNYYGDTWATMTI---DQLKNWTNQVNEDSDETRFYKDARLYVSGLVAQGKFKSKNF 135
++ Y GD T+ D K+ + ED + R+ S +V +G+ F
Sbjct: 176 VEKEKYCGDKTCMHTVSDKDGDKDESKSTVEDKADEPIRN--RITYSQIVKEGR----RF 229
Query: 136 GIDLSPKILFAQSDLLSVLIKSRVHQYLEFQSLSNFHTFENDNFERLTNSKQEIFTDQTL 195
IDL K+L++Q L+ +LIKS V +Y+EF++++ F E++ S+ ++F + L
Sbjct: 230 NIDLVSKLLYSQGLLIDLLIKSDVSRYVEFKNVTRILAFREGKVEQVPCSRADVFNSKEL 289
Query: 196 PLMTKRNLMRFIKFVLEWEKSTDIWKPYAEQPLASFLVDKFKLEKPQVFELIFSIGMCRN 255
++ KR LM+F+ F LE+E+ D ++ + + + +L K Q F ++ SI M
Sbjct: 290 TMVEKRMLMKFLTFCLEYEQHPDEYQAFRQCSFSEYLKTKKLTPNLQHF-VLHSIAMTSE 348
Query: 256 LDTKTPEGLARIRRFLTSFDVYGPFPVLYSKYGGPGELSQGFCRSAAVAGATYKLNHKLV 315
T +GL + FL +G P L+ Y G GE+ QGFCR AV G Y L HK+
Sbjct: 349 SSCTTIDGLNATKNFLQCLGRFGNTPFLFPLY-GQGEIPQGFCRMCAVFGGIYCLRHKVQ 407
Query: 316 SYDPNSQTA-----VFEDGSRVRVTEKVVASPTQHPQNGGNIPPQKYEVHRLTCVVEKDC 370
+ + ++ + G R+ +V + N+ Q ++ R + ++
Sbjct: 408 CFVVDKESGRCKAIIDHFGQRINAKYFIVEDSYLSEETCSNV--QYKQISRAVLITDQSI 465
Query: 371 SQWFSEGESAAMVVFPPDSLKTGNVEAVQVVILGSGAEVCEPGTCVWYFSTTQAGPRGDL 430
+ + +++ ++V P + AV+V L S C T + + T +
Sbjct: 466 LKTDLDQQTSILIVPPAEP----GACAVRVTELCSSTMTCMKDTYLVHL-TCSSSKTARE 520
Query: 431 DLDAALEAMINSILRESSDIPNEDELVQ 458
DL++ ++ + NE+EL +
Sbjct: 521 DLESVVKKLFTPYTETEI---NEEELTK 545
Score = 64.3 bits (155), Expect = 5e-10
Identities = 28/67 (41%), Positives = 43/67 (63%)
Query: 43 LPETTPEQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTN 102
+ + P + DV+I GTGL ESIL+A+ + G VLHIDS +YYG WA+ + L +W
Sbjct: 1 MADNLPTEFDVVIIGTGLPESILAAACSRSGQRVLHIDSRSYYGGNWASFSFSGLLSWLK 60
Query: 103 QVNEDSD 109
+ +++D
Sbjct: 61 EYQQNND 67
>Hs4503971 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 447
Score = 106 bits (264), Expect = 1e-22
Identities = 93/399 (23%), Positives = 177/399 (44%), Gaps = 36/399 (9%)
Query: 49 EQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMT-IDQLKNWTNQVNED 107
E+ DV++ GTGL E ILS ++ G VLH+D N YYG +++T +++L
Sbjct: 3 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEEL---------- 52
Query: 108 SDETRFYKDARLYVSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLIKSRVHQYLEFQS 167
YK +L + G + +++ +DL PK L A L+ +L+ + V +YL+F+
Sbjct: 53 ------YKRFQLLEGPPESMG--RGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKV 104
Query: 168 LSNFHTFENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEWEKSTDIWKPYAEQP 227
+ ++ ++ +++ E + + KR +F+ FV ++++ +
Sbjct: 105 VEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQ 164
Query: 228 LASF--LVDKFKLEKPQVFELIFSIGMCRN---LDTKTPEGLARIRRFLTSFDVYGPFPV 282
S + KF L + + ++ + R LD E + RI+ + S YG P
Sbjct: 165 TTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETVNRIKLYSESLARYGKSPY 224
Query: 283 LYSKYGGPGELSQGFCRSAAVAGATYKLNHKL--VSYDPNSQTAVFEDGSRVRVTEKVVA 340
LY Y G GEL QGF R +A+ G TY LN + + + V +G R ++++
Sbjct: 225 LYPLY-GLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVAR-CKQLIC 282
Query: 341 SPTQHPQNGGNIPPQKYEVHRLTCVVEKDCSQWFSEGESAAMVVFPPDSLKTGNVEAVQV 400
P+ P + +V R+ C++ + ++ ++ P + + + V
Sbjct: 283 DPSYIPDR----VRKAGQVIRIICILSHPIKN--TNDANSCQIIIPQN--QVNRKSDIYV 334
Query: 401 VILGSGAEVCEPGTCVWYFSTTQAGPRGDLDLDAALEAM 439
++ V G + STT + +++ ALE +
Sbjct: 335 CMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALELL 373
>SPAC22H10.12c [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 440
Score = 105 bits (262), Expect = 2e-22
Identities = 90/382 (23%), Positives = 165/382 (42%), Gaps = 38/382 (9%)
Query: 49 EQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTNQVNEDS 108
E+ DV++ GTGL E +LS L+ G VLHID N+YYG A++ + QL +
Sbjct: 3 EEYDVIVLGTGLTECVLSGLLSVDGKKVLHIDRNDYYGADSASLNLTQLYALFRPGEQRP 62
Query: 109 DETRFYKDARLYVSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLIKSRVHQYLEFQSL 168
+ + +++ +DL PK L A DL ++LI + V +Y+EF+ +
Sbjct: 63 ESLG------------------RDRDWCVDLVPKFLMANGDLTNILIYTDVTRYIEFKQI 104
Query: 169 SNFHTFENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEW-EKSTDIWKPY-AEQ 226
+ + + + ++ ++ E + L KR +F+++V + E +K ++
Sbjct: 105 AGSYVYRDGRIAKVPGNEMEALKSPLMSLFEKRRAKKFLEWVNNYREDDPSTYKDINIDR 164
Query: 227 PLASFLVDKFKLEKPQVFELIFSIGMCRNLD---TKTP--EGLARIRRFLTSFDVYGPFP 281
+ KF L+ + M LD K P E RI + +S +G P
Sbjct: 165 DSMESVFKKFGLQSGT--QDFIGHAMALYLDDAYLKKPARETRERILLYASSIAKFGKSP 222
Query: 282 VLYSKYGGPGELSQGFCRSAAVAGATYKLNHKL--VSYDPNSQTAVFEDGSRVRVTEKVV 339
+Y Y G GEL QGF R +A+ G TY LN + + Y + G +V ++++
Sbjct: 223 YIYPLY-GLGELPQGFARLSAIYGGTYMLNQPVDEIVYGDDGVAIGVRSGDQVAKAKQII 281
Query: 340 ASPTQHPQNGGNIPPQKYEVHRLTCVVEKDCSQWFSEGESAAMVVFPPDSLKTGNVEAVQ 399
P+ + ++ + R C++ ++ + ++ P + +K +
Sbjct: 282 GDPSYFREKVRSVG----RLVRAICILNHPIPN--TDNLDSVQIIIPQNQVK--RKHDIY 333
Query: 400 VVILGSGAEVCEPGTCVWYFST 421
+ + S VC G + ST
Sbjct: 334 IAGISSVHNVCPKGYYLAIIST 355
>Hs6598323 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 445
Score = 103 bits (258), Expect = 6e-22
Identities = 94/398 (23%), Positives = 171/398 (42%), Gaps = 34/398 (8%)
Query: 49 EQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTNQVNEDS 108
E+ DV++ GTGL E ILS ++ G VLH+D N YYG A++T ED
Sbjct: 3 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASIT----------PLED- 51
Query: 109 DETRFYKDARLYVSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLIKSRVHQYLEFQSL 168
YK R + G + + +++ +DL PK L A L+ +L+ + V +YL+F+
Sbjct: 52 ----LYK--RFKIPGSPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVT 105
Query: 169 SNFHTFENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEWEKSTDIWKPYAEQPL 228
++ ++ +++ E + L KR +F+ +V +++ D P
Sbjct: 106 EGSFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEK-DPRTFEGIDPK 164
Query: 229 ASFLVD---KFKLEKPQVFELIFSIGMCRN---LDTKTPEGLARIRRFLTSFDVYGPFPV 282
+ + D KF L + + ++ + R LD E + RI+ + S YG P
Sbjct: 165 KTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARYGKSPY 224
Query: 283 LYSKYGGPGELSQGFCRSAAVAGATYKLNHKLVS-YDPNSQTAVFEDGSRVRVTEKVVAS 341
LY Y G GEL QGF R +A+ G TY LN + N + + + ++++
Sbjct: 225 LYPLY-GLGELPQGFARLSAIYGGTYMLNKPIEEIIVQNGKVIGVKSEGEIARCKQLICD 283
Query: 342 PTQHPQNGGNIPPQKYEVHRLTCVVEKDCSQWFSEGESAAMVVFPPDSLKTGNVEAVQVV 401
P+ + +V R+ C++ + ++ ++ P + + + V
Sbjct: 284 PSYVKDRVEKVG----QVIRVICILSHPIKN--TNDANSCQIIIPQN--QVNRKSDIYVC 335
Query: 402 ILGSGAEVCEPGTCVWYFSTTQAGPRGDLDLDAALEAM 439
++ V G + STT + ++ ALE +
Sbjct: 336 MISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELL 373
>CE14944 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 444
Score = 102 bits (254), Expect = 2e-21
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 24/269 (8%)
Query: 49 EQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMT-IDQLKNWTNQVNED 107
E+ D ++ GTGL E I+S L+ G VLHID NNYYG A++T ++QL
Sbjct: 3 EEYDAIVLGTGLKECIISGMLSVSGKKVLHIDRNNYYGGESASLTPLEQLYE-------- 54
Query: 108 SDETRFYKDARLYVSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLIKSRVHQYLEFQS 167
+F+ Q + +++ +DL PK L A L+ +LI + V +YLEF+S
Sbjct: 55 ----KFHGP-----QAKPQQEMGRGRDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKS 105
Query: 168 LSNFHTFENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEW-EKSTDIWKPY-AE 225
+ + ++ + E + + KR +F+ +V ++ E D W+
Sbjct: 106 IEASFVVKGGKIYKVPADEMEALATSLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPH 165
Query: 226 QPLASFLVDKFKLEKPQVFELIFSIGMCRNLDTKT---PEGLARIRRFLTSFDVYGPFPV 282
+ +KF L++ ++ + R+ + K + +IR + S YG P
Sbjct: 166 NSTMQQVYEKFGLDENTADFTGHALALYRDDEHKNQPYAPAVEKIRLYSDSLARYGKSPY 225
Query: 283 LYSKYGGPGELSQGFCRSAAVAGATYKLN 311
LY Y G GEL QGF R +A+ G TY L+
Sbjct: 226 LYPLY-GLGELPQGFARLSAIYGGTYMLD 253
>At5g09550 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 445
Score = 97.1 bits (240), Expect = 7e-20
Identities = 79/307 (25%), Positives = 137/307 (43%), Gaps = 35/307 (11%)
Query: 49 EQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTNQVNEDS 108
E+ DV++ GTGL E ILS L+ G VLH+D N+YYG +++ + QL W D+
Sbjct: 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLTQL--WKRFRGSDT 60
Query: 109 DETRFYKDARLYVSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLIKSRVHQYLEFQSL 168
E + S+ + +D+ PK + A L+ LI + V +YL F+++
Sbjct: 61 PE----------------ENLGASREYNVDMIPKFIMANGLLVQTLIHTDVTKYLNFKAV 104
Query: 169 SNFHTFENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEWEKSTDIWKPYAEQPL 228
++ ++ + E + L KR +F +V ++++ P + + L
Sbjct: 105 DGSFVYKKGKIYKVPATDVEALKSPLMGLFEKRRARKFFIYVQDYDEK----DPKSHEGL 160
Query: 229 ------ASFLVDKFKLEKPQVFELIFSIGMCRN---LDTKTPEGLARIRRFLTSFDVY-G 278
A ++ K+ LE + + ++ + + LD + + RI+ + S + G
Sbjct: 161 DLSKVTAREIISKYGLEDDTIDFIGHALALHNDDDYLDQPAIDFVKRIKLYAESLARFQG 220
Query: 279 PFPVLYSKYGGPGELSQGFCRSAAVAGATYKLNHK--LVSYDPNSQTAVFEDGSRVRVTE 336
P +Y Y G GEL Q F R +AV G TY LN V +D + + +
Sbjct: 221 GSPYIYPLY-GLGELPQAFARLSAVYGGTYMLNKPECKVEFDGSGKAIGVTSAGETAKCK 279
Query: 337 KVVASPT 343
KVV P+
Sbjct: 280 KVVCDPS 286
>At2g44100 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 445
Score = 97.1 bits (240), Expect = 7e-20
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 31/305 (10%)
Query: 49 EQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTNQVNEDS 108
E+ +V++ GTGL E ILS L+ G VLH+D N+YYG ++ ++QL W E+
Sbjct: 3 EEYEVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLNQL--WKKFRGEEK 60
Query: 109 DETRFYKDARLYVSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLIKSRVHQYLEFQSL 168
S+++ +D+ PK + A L+ VLI + V +YL F+++
Sbjct: 61 APAHL----------------GSSRDYNVDMMPKFMMANGKLVRVLIHTDVTKYLSFKAV 104
Query: 169 SNFHTFENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEWEKSTDIWKPYAEQPL 228
+ F +++ + E + + KR +F +V E+++ K + L
Sbjct: 105 DGSYVFVQGKVQKVPATPMEALKSPLMGIFEKRRAGKFFSYVQEYDEKDP--KTHDGMDL 162
Query: 229 ----ASFLVDKFKLEKPQVFELIFSIGM-CRNLDTKTP--EGLARIRRFLTSFDVY-GPF 280
L+ KF L++ + + ++ + C + P + + R++ + S + G
Sbjct: 163 RRVTTKDLIAKFGLKEDTIDFIGHAVALHCNDNHLHQPAYDTVMRMKLYAESLARFQGGS 222
Query: 281 PVLYSKYGGPGELSQGFCRSAAVAGATYKLNHK--LVSYDPNSQTAVFEDGSRVRVTEKV 338
P +Y Y G GEL Q F R +AV G TY LN V +D + + +KV
Sbjct: 223 PYIYPLY-GLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVSGVTSEGETAKCKKV 281
Query: 339 VASPT 343
V P+
Sbjct: 282 VCDPS 286
>At3g59920 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 444
Score = 96.3 bits (238), Expect = 1e-19
Identities = 77/308 (25%), Positives = 135/308 (43%), Gaps = 31/308 (10%)
Query: 49 EQVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTNQVNEDS 108
E+ +V++ GTGL E ILS L+ G VLH+D N+YYG ++ ++QL W E+
Sbjct: 3 EEYEVIVLGTGLKECILSGLLSVDGVKVLHMDRNDYYGGESTSLNLNQL--WKKFRGEEK 60
Query: 109 DETRFYKDARLYVSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLIKSRVHQYLEFQSL 168
+ S+++ +D+ PK + L+ LI + V +YL F+++
Sbjct: 61 ----------------APEHLGASRDYNVDMMPKFMMGNGKLVRTLIHTDVTKYLSFKAV 104
Query: 169 SNFHTFENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEWEKSTDIWKPYAEQPL 228
+ F +++ + E + + KR +F FV E+++ K + L
Sbjct: 105 DGSYVFVKGKVQKVPATPMEALKSSLMGIFEKRRAGKFFSFVQEYDEKDP--KTHDGMDL 162
Query: 229 ASF----LVDKFKLEKPQVFELIFSIGMCRN---LDTKTPEGLARIRRFLTSFDVY-GPF 280
L+ K+ L+ + + ++ + N LD + + R++ + S + G
Sbjct: 163 TRVTTKELIAKYGLDGNTIDFIGHAVALHTNDQHLDQPAFDTVMRMKLYAESLARFQGTS 222
Query: 281 PVLYSKYGGPGELSQGFCRSAAVAGATYKLNHK--LVSYDPNSQTAVFEDGSRVRVTEKV 338
P +Y Y G GEL Q F R +AV G TY LN V +D + +K+
Sbjct: 223 PYIYPLY-GLGELPQAFARLSAVYGGTYMLNKPECKVEFDEGGKVIGVTSEGETAKCKKI 281
Query: 339 VASPTQHP 346
V P+ P
Sbjct: 282 VCDPSYLP 289
>ECU02g1410 [O] KOG1439 RAB proteins geranylgeranyltransferase component A (RAB
escort protein)
Length = 429
Score = 90.5 bits (223), Expect = 7e-18
Identities = 100/412 (24%), Positives = 177/412 (42%), Gaps = 41/412 (9%)
Query: 50 QVDVLIAGTGLIESILSASLAWQGSTVLHIDSNNYYGDTWATMTIDQLKNWTNQVNEDSD 109
+ D +I GTGL+E + LA + V+ +D N YG +AT+ +L
Sbjct: 6 EYDFVILGTGLVECAVGCILARKNKRVILLDRNPMYGSDFATLRYTEL------------ 53
Query: 110 ETRFYKDARLYVSGLVAQGKFKSKNFGIDLSPKILFAQSDLLSVLIKSRVHQYLEFQSLS 169
ET F + + + + F IDL+PK+ A S +L +L++ + +YLEF +
Sbjct: 54 ETYFQSPS------IAPELEVYDTEFSIDLTPKLFLADSKMLKMLVRYGIDEYLEFCRIP 107
Query: 170 NFHTFENDNFERLTNSKQEIFTDQTLPLMTKRNLMRFIKFVLEWEKSTDIWKPYAEQPLA 229
+ TN Q + T + + K +MRF V ++ + K Y +
Sbjct: 108 GSFLWRKKLHPVPTNEAQSM-TTGLIGIWQKPKVMRFFWNVRDYAREAAKGKAYKFKDTM 166
Query: 230 SFLVDKFKLEKPQVFELIFSIGMCRNLD--------TKTPEGLARIRRFLTSFDVYGPFP 281
++ L + + ELI G+ NLD +T + + R + ++ P
Sbjct: 167 REEFKEYGLTE-ESMELI-GHGIALNLDDSYLDRHPKETFDKIVTYVRSIICYENSMESP 224
Query: 282 VLYSKYGGPGELSQGFCRSAAVAGATYKLNHKLVSY-DPNSQTAVFEDGSR--VRVTEKV 338
LY +Y G E++QGF RS G +N +++ + N + V E ++ +R+
Sbjct: 225 YLYPRY-GLSEIAQGFARSCCTKGGEIMINAEILEVNEKNVEVLVREPVNKNVLRIKAGK 283
Query: 339 VASPTQHPQNGGNIPPQKYEVHRLTCVVEKDCSQWFSEGESAAMVVFPPDSLKTGNVEAV 398
+ S + Q + YE+ R C++ D + G S+A ++F + LK N +
Sbjct: 284 IISGQSYFQRSTLL----YEIIRGICIIRGD-PVCVTRGASSAQIIFLKEELKRRN--DI 336
Query: 399 QVVILGSGAEVCEPGTCVWYFSTTQAGPRGDLDLDAALEAMINSILRESSDI 450
VV+LGS + G V ST + + ++ LE + I+R D+
Sbjct: 337 FVVVLGSEEKSTPEGYKVAIISTVKETSDPENEIKVVLE-KLGDIVRYFVDV 387
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,672,216
Number of Sequences: 60738
Number of extensions: 1627717
Number of successful extensions: 3835
Number of sequences better than 1.0e-05: 17
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3772
Number of HSP's gapped (non-prelim): 25
length of query: 610
length of database: 30,389,216
effective HSP length: 112
effective length of query: 498
effective length of database: 23,586,560
effective search space: 11746106880
effective search space used: 11746106880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)