ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV1576 good Z KOG2046 Cytoskeleton Calponin
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV1576 542884 543483 200
(200 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR367w [Z] KOG2046 Calponin 266 1e-71
SPAC4F8.10c [Z] KOG2046 Calponin 91 8e-19
7292436 [Z] KOG2046 Calponin 87 2e-17
Hs4507357 [Z] KOG2046 Calponin 82 4e-16
7303337 [Z] KOG2046 Calponin 82 5e-16
CE10370 [Z] KOG2046 Calponin 74 1e-13
Hs10047092 [Z] KOG2046 Calponin 73 3e-13
CE09767 [Z] KOG2046 Calponin 65 8e-11
Hs11440003 [Z] KOG2046 Calponin 64 2e-10
ECU03g1150 [Z] KOG2046 Calponin 64 2e-10
CE17614 [Z] KOG2046 Calponin 64 2e-10
HsM4502921 [Z] KOG2046 Calponin 62 5e-10
Hs21361120 [Z] KOG2046 Calponin 62 7e-10
Hs4507359 [Z] KOG2046 Calponin 60 2e-09
YPL242c [T] KOG2128 Ras GTPase-activating protein family - IQGAP 58 1e-08
CE17082 [Z] KOG2046 Calponin 56 4e-08
Hs4502923 [Z] KOG2046 Calponin 51 1e-06
Hs4758018 [Z] KOG2046 Calponin 49 3e-06
>YOR367w [Z] KOG2046 Calponin
Length = 200
Score = 266 bits (681), Expect = 1e-71
Identities = 127/199 (63%), Positives = 161/199 (80%), Gaps = 2/199 (1%)
Query: 1 MSYGIKPDVTSLDDDLKESRSKKFNKHDITEIKRWIY-AIIEEQSPDDSLLDALKDGTVL 59
MSY K DVTSLD+DL++ R KF+ I IK W+Y ++++E +P LL+ LKDGTVL
Sbjct: 1 MSYDKKADVTSLDEDLRQLRESKFSPEAIQNIKIWVYKSVLKEIAPPGDLLECLKDGTVL 60
Query: 60 CKLANRLLKEETGVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEK 119
CKLAN L + +TG ++ + WKSS++ FVQM+QIS FL F+ KYGVP+DELFQT+DL+E+K
Sbjct: 61 CKLANILYEADTGEANHISWKSSKMPFVQMDQISQFLSFSRKYGVPEDELFQTIDLFEKK 120
Query: 120 DPAIVYQTIKSLSRYANSKHPDLFPVIGPQLSTKRPRPPVKGKPSHLKN-VGWSTVEYGY 178
DPAIV+QT+KSLSRYAN KH D FPV+GPQLSTK+PRPPVK KP HL++ GWST EYGY
Sbjct: 121 DPAIVFQTLKSLSRYANKKHTDRFPVLGPQLSTKKPRPPVKSKPKHLQDGTGWSTFEYGY 180
Query: 179 MKGANQSTEGIVFGNKRDI 197
MKGA+Q+TEG+V G +RDI
Sbjct: 181 MKGASQATEGVVLGQRRDI 199
>SPAC4F8.10c [Z] KOG2046 Calponin
Length = 174
Score = 91.3 bits (225), Expect = 8e-19
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 9/172 (5%)
Query: 31 EIKRWIYAIIEEQ-SPDDSLLDALKDGTVLCKLANRLLKEETGVSDSMKWKSSRIAFVQM 89
E + WI + + + LLD L+ G +LC R+ KE G + +++K S + FVQM
Sbjct: 8 EAREWIEETLHTKLNAQLDLLDQLQSGVILC----RICKEALGAN--IRYKESNMPFVQM 61
Query: 90 EQISMFLQFATKY-GVPQDELFQTVDLYEEKDPAIVYQTIKSLSRYANSKHPDLFPVIGP 148
E IS F+ +A + VP ++FQT DL+E ++ V ++I S SRYA P +GP
Sbjct: 62 ENISAFINYAQQVVHVPSQDMFQTSDLFERRNDEQVLRSIHSFSRYAAKMFPGKVRGLGP 121
Query: 149 QLSTKRPRPPVKGKPSHLKNVGWSTVEYGYMKGANQSTEGIVFGNKRDITMN 200
+L+ K+PR + + G ++++YG Q TE I F +RD T N
Sbjct: 122 KLAEKKPRVFSAQQQREFRE-GVNSLQYGSFDMPTQGTEKIAFSRRRDPTGN 172
>7292436 [Z] KOG2046 Calponin
Length = 175
Score = 86.7 bits (213), Expect = 2e-17
Identities = 66/179 (36%), Positives = 92/179 (50%), Gaps = 16/179 (8%)
Query: 21 SKKFNKHDITEIKRWIYAIIEE----QSPDDSLLDALKDGTVLCKLANRLLKEETGVSDS 76
+ K+++ E WI A+ EE D+ + LKDG +LCKLAN L
Sbjct: 7 NSKYSEELAQESLEWIKAVTEEPINTSGDTDNFFEVLKDGVILCKLANALQP-----GSI 61
Query: 77 MKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDPAIVYQTIKSLSRYAN 136
K S++AF ME IS FL A +GVP E FQ+VDL+E ++ V ++SL R A+
Sbjct: 62 KKINESKMAFKCMENISAFLACAKNFGVPTQETFQSVDLWERQNLNSVVICLQSLGRKAS 121
Query: 137 SKHPDLFPVIGPQLSTKRPRPPVKGKPSHLKNVGWSTVEYGYMKGANQSTEGIVFGNKR 195
+ + P IGP+ + K R + NV +++YG KGA QS GI FGN R
Sbjct: 122 NFNK---PSIGPKEADKNVRNFSDEQLRAGANV--ISLQYGSNKGATQS--GINFGNTR 173
>Hs4507357 [Z] KOG2046 Calponin
Length = 199
Score = 82.4 bits (202), Expect = 4e-16
Identities = 56/136 (41%), Positives = 80/136 (58%), Gaps = 7/136 (5%)
Query: 53 LKDGTVLCKLANRLLKEETGVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQT 112
LKDGTVLC+L N L E G + K ++S +AF QMEQIS FLQ A +YG+ ++FQT
Sbjct: 56 LKDGTVLCELINALYPE--GQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQT 113
Query: 113 VDLYEEKDPAIVYQTIKSLSRYANSKHPDLF---PVIGPQLSTKRPRPPVKGKPSHLKNV 169
VDL+E K+ A V +T+ +L A ++ LF P P+ S + PR + KNV
Sbjct: 114 VDLWEGKNMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNV 173
Query: 170 GWSTVEYGYMKGANQS 185
++ G +GA+Q+
Sbjct: 174 --IGLQMGTNRGASQA 187
>7303337 [Z] KOG2046 Calponin
Length = 184
Score = 82.0 bits (201), Expect = 5e-16
Identities = 68/186 (36%), Positives = 94/186 (49%), Gaps = 10/186 (5%)
Query: 11 SLDDDLKESRSKKFNKHDITEIKRWIYAIIEEQSP-DDSLLDALKDGTVLCKLANRLLKE 69
SL+ ++ + K N E + WI AII E+ P S D LKDG VLCKL N L
Sbjct: 2 SLERAVRAKIASKRNPEMDKEAQEWIEAIIAEKFPAGQSYEDVLKDGQVLCKLINVLSPN 61
Query: 70 ETGVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDPAIVYQTIK 129
K SS F ME I+ F + +YGVP ++FQTVDLYE+KD A V TI
Sbjct: 62 AVP-----KVNSSGGQFKFMENINNFQKALKEYGVPDIDVFQTVDLYEKKDIANVTNTIF 116
Query: 130 SLSRYANSKHPDL-FPVIGPQLSTKRPRPPVKGKPSHLKNVGWSTVEYGYMKGANQSTEG 188
+L R A KH D P +GP+ + + R + + + + ++ G KGA Q+ +
Sbjct: 117 ALGR-ATYKHADFKGPFLGPKPADECKRDFTEEQLKAGQTI--VGLQAGSNKGATQAGQN 173
Query: 189 IVFGNK 194
+ G K
Sbjct: 174 LGAGRK 179
>CE10370 [Z] KOG2046 Calponin
Length = 192
Score = 73.9 bits (180), Expect = 1e-13
Identities = 46/116 (39%), Positives = 68/116 (57%), Gaps = 10/116 (8%)
Query: 22 KKFNKHDITEIKRWIYAI----IEEQSPDDSLLDALKDGTVLCKLANRLLKEETGVSDSM 77
+K++K+ EI +W+ + + Q D+L+ +DG++LC LAN L
Sbjct: 25 EKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCTLANSLKPGSV-----K 79
Query: 78 KWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDPAIVYQTIKSLSR 133
K +S +AF +ME IS FL+FA +Y V + ELFQTVDLYE +DP V + SL+R
Sbjct: 80 KVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLICLASLAR 134
>Hs10047092 [Z] KOG2046 Calponin
Length = 282
Score = 72.8 bits (177), Expect = 3e-13
Identities = 43/86 (50%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 53 LKDGTVLCKLANRLLKEETGVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQT 112
L DGTVLCKL N L G K S++AF QMEQIS FL+ A YGV ++FQT
Sbjct: 56 LMDGTVLCKLINSLYPP--GQEPIPKISESKMAFKQMEQISQFLKAAETYGVRTTDIFQT 113
Query: 113 VDLYEEKDPAIVYQTIKSLSRYANSK 138
VDL+E KD A V +T+ +L A +K
Sbjct: 114 VDLWEGKDMAAVQRTLMALGSVAVTK 139
>CE09767 [Z] KOG2046 Calponin
Length = 142
Score = 64.7 bits (156), Expect = 8e-11
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 16 LKESRSKKFNKHDITEIKRWIYAI----IEEQSPDDSLLDALKDGTVLCKLANRLLKEET 71
+++ + KF + T + WI + I D+ + LKDGT+LCK AN + E
Sbjct: 14 VRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLCKAANGI---EA 70
Query: 72 GVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDPAIVYQTIKSL 131
G ++ S F ME I+ F++FA K GVP +E FQ+V+L E +D V T+ SL
Sbjct: 71 GSIKKVQKPIS--TFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVCVTLLSL 128
Query: 132 SR 133
R
Sbjct: 129 GR 130
>Hs11440003 [Z] KOG2046 Calponin
Length = 201
Score = 63.5 bits (153), Expect = 2e-10
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 9/131 (6%)
Query: 17 KESRSKKFNKHDITEIKRWIYAIIEEQSPDDSLLDA--------LKDGTVLCKLANRLLK 68
+E +SK K+D +R + II + PD D LK+G +L KL N L
Sbjct: 12 REVQSKIEKKYDEELEERLVEWIIVQCGPDVGRPDRGRLGFQVWLKNGVILSKLVNSLYP 71
Query: 69 EETGVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDPAIVYQTI 128
+ + + S + F QMEQ++ FL+ A YGV + ++FQTVDL+E KD A V +T+
Sbjct: 72 DGSKPVKVPENPPSMV-FKQMEQVAQFLKAAEDYGVIKTDMFQTVDLFEGKDMAAVQRTL 130
Query: 129 KSLSRYANSKH 139
+L A +K+
Sbjct: 131 MALGSLAVTKN 141
>ECU03g1150 [Z] KOG2046 Calponin
Length = 182
Score = 63.5 bits (153), Expect = 2e-10
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 31 EIKRWIYAIIEEQSPDDSLLDALKDGTVLCKLANRLLKEETGVSDSMKWKSSRIAFVQME 90
E+ WI ++ E+ + KDG C+ N++ + +K+K S+ FVQ E
Sbjct: 17 EVTLWIETVLGEKFEPGTFHSLFKDGVRFCRFLNKVSPLD------VKYKESKQIFVQRE 70
Query: 91 QISMFLQFATKYGVPQDELFQTVDLYEEKDPAIVYQTIKSLSRYANSKHPDLFPVIGPQL 150
I F+ K + + ELFQT DL+E KD V + +LSR + P IGP L
Sbjct: 71 NICSFINGLKKLRMNEYELFQTNDLFEAKDLRQVVICLYALSRQLQKERMFSGPFIGPHL 130
Query: 151 STK 153
+TK
Sbjct: 131 ATK 133
>CE17614 [Z] KOG2046 Calponin
Length = 268
Score = 63.5 bits (153), Expect = 2e-10
Identities = 48/154 (31%), Positives = 74/154 (47%), Gaps = 13/154 (8%)
Query: 12 LDDDLKESRSKKFNKHDITEIKRWIYAIIEEQSPDD--------SLLDALKDGTVLCKLA 63
L +L++ +F + E+ +WI + E+ D + + LKDG +LCKL
Sbjct: 75 LSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDGVMLCKLI 134
Query: 64 NRLLKEETGVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDPAI 123
+L V + K ++AF ME IS FL A ++GV + FQTVDLYE K
Sbjct: 135 EKLDPSCRVVYN----KKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQCYK 190
Query: 124 VYQTIKSLSRYANSKHPDL-FPVIGPQLSTKRPR 156
V + ++ L+ A S+ L P +L+ PR
Sbjct: 191 VIECLRLLAAVAQSRSSHLEHPAWVVKLAQSSPR 224
>HsM4502921 [Z] KOG2046 Calponin
Length = 297
Score = 62.0 bits (149), Expect = 5e-10
Identities = 48/189 (25%), Positives = 91/189 (47%), Gaps = 17/189 (8%)
Query: 12 LDDDLKESRSKKFNKHDITEIKRWIYAIIEEQSPDDSLLDALKDGTVLCKLANRLLKEET 71
L ++K ++K++ E++ WI + + ++ +D LKDG +LC+ N+L
Sbjct: 14 LSAEVKNKLAQKYDHQREQELREWIEGVTGRRI-GNNFMDGLKDGIILCEFINKLQPGSV 72
Query: 72 GVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDPAIVYQTIKSL 131
K S + Q+E I F++ TKYGV ++F+ DL+E + V T+ +L
Sbjct: 73 -----KKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLAL 127
Query: 132 SRYANSKHPDLFPVIGPQLSTKRPRPPVKGKPSHLKNVGWSTVEYGYMKGANQ--STEGI 189
+ A +K + +G + + K+ R GK +N+ G G+N+ S +G+
Sbjct: 128 ASMAKTKGNKV--NVGVKYAEKQERKFEPGKLREGRNI------IGLQMGSNKFASQQGM 179
Query: 190 -VFGNKRDI 197
+G +R +
Sbjct: 180 TAYGTRRHL 188
>Hs21361120 [Z] KOG2046 Calponin
Length = 297
Score = 61.6 bits (148), Expect = 7e-10
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 12 LDDDLKESRSKKFNKHDITEIKRWIYAIIEEQSPDDSLLDALKDGTVLCKLANRLLKEET 71
L ++K ++K++ E++ WI + + ++ +D LKDG +LC+ N+L
Sbjct: 14 LSAEVKNKLAQKYDHQREQELREWIEGVTGRRI-GNNFMDGLKDGIILCEFINKLQPGSV 72
Query: 72 GVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDPAIVYQTIKSL 131
K S + Q+E I F++ TKYGV ++F+ DL+E + V T+ +L
Sbjct: 73 -----KKINESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLAL 127
Query: 132 SRYANSKHPDLFPVIGPQLSTKRPRPPVKGKPSHLKNVGWSTVEYGYMKGANQ--STEGI 189
+ A +K + +G + + K+ R GK +N+ G G N+ S +G+
Sbjct: 128 ASMAKTKGNKV--NVGVKYAEKQERKFEPGKLREGRNI------IGLQMGTNKFASQQGM 179
Query: 190 -VFGNKRDI 197
+G +R +
Sbjct: 180 TAYGTRRHL 188
>Hs4507359 [Z] KOG2046 Calponin
Length = 201
Score = 60.1 bits (144), Expect = 2e-09
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 17 KESRSKKFNKHDITEIKRWIYAIIEEQSPDDSLLDA--------LKDGTVLCKLANRLLK 68
+E +SK K+D +R + II + PD D LK+G +L KL N L
Sbjct: 12 REVQSKIEKKYDEELEERLVEWIIVQCGPDVGRPDRGPLGFQVWLKNGVILSKLVNSLYP 71
Query: 69 EETGVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDPAIVYQTI 128
+ + + S + F QMEQ++ FL+ A GV + ++FQTVDL+E KD A V +T+
Sbjct: 72 DGSKPVKVPENPPSMV-FKQMEQVAQFLKAAEDSGVIKTDMFQTVDLFEGKDMAAVQRTL 130
Query: 129 KSLSRYANSKH 139
+L A +K+
Sbjct: 131 MALGSLAVTKN 141
>YPL242c [T] KOG2128 Ras GTPase-activating protein family - IQGAP
Length = 1495
Score = 57.8 bits (138), Expect = 1e-08
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 29 ITEIKRWIYAIIEEQSPDDSLL---DALKDGTVLCKLANRLLKEETGVSDSMKWKSSRIA 85
++E+K WI A+IEE P + L D+L++G L KL R+ + T V ++
Sbjct: 111 VSEVKIWIEAVIEEALPSEIELCVGDSLRNGVFLAKLTQRINPDLTTVIFPA---GDKLQ 167
Query: 86 FVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDPAIVYQTIKSLSRYANSKHPDLFPV 145
F + I+ F GVP F+ DLY +K+ V++T+ L N K P P
Sbjct: 168 FKHTQNINAFFGLVEHVGVPDSFRFELQDLYNKKNIPQVFETLHILISMINKKWPGKTPA 227
Query: 146 I 146
+
Sbjct: 228 L 228
>CE17082 [Z] KOG2046 Calponin
Length = 154
Score = 55.8 bits (133), Expect = 4e-08
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 6 KPDVTSLDDDLKESRSKKFNKHDITEIKRWIYAIIEE----QSPDDSLLDALKDGTVLCK 61
+P + + + ++ KFN + + WI + +E ++ D+ + LKDG LCK
Sbjct: 7 RPRPAGMAGAILDKQASKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLCK 66
Query: 62 LANRLLKEETGVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDP 121
L N + + V MK S+ F +E I+ F A GV +E FQ+VDL++ +D
Sbjct: 67 LVNAI--KAGSVKKIMKPISN---FNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDL 121
Query: 122 AIVYQTIKSLSR 133
V T++SL+R
Sbjct: 122 FSVTVTLQSLAR 133
>Hs4502923 [Z] KOG2046 Calponin
Length = 329
Score = 50.8 bits (120), Expect = 1e-06
Identities = 41/161 (25%), Positives = 73/161 (44%), Gaps = 13/161 (8%)
Query: 2 SYGIKPDVTSLDDDLKESRSKKFNKHDITEIKRWIYAIIEEQSPDDSLLDALKDGTVLCK 61
SYG+ +V K + K++ +++ WI + + L LKDG +LC+
Sbjct: 9 SYGLSAEV-------KNKIASKYDHQAEEDLRNWIEEVTGMSIGPNFQL-GLKDGIILCE 60
Query: 62 LANRLLKEETGVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDP 121
L N+L K S + + Q+E I F++ YG+ ++F+ DL+E +
Sbjct: 61 LINKLQPGSV-----KKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNM 115
Query: 122 AIVYQTIKSLSRYANSKHPDLFPVIGPQLSTKRPRPPVKGK 162
V T+ +L+ A +K IG + + K+ R +GK
Sbjct: 116 TQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGK 156
>Hs4758018 [Z] KOG2046 Calponin
Length = 309
Score = 49.3 bits (116), Expect = 3e-06
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 2 SYGIKPDVTSLDDDLKESRSKKFNKHDITEIKRWIYAIIEEQSPDDSLLDALKDGTVLCK 61
SYG+ +V K K++ E++ WI + D LKDGT+LC
Sbjct: 11 SYGLSAEV-------KNRLLSKYDPQKEAELRTWIEGLTGLSIGPD-FQKGLKDGTILCT 62
Query: 62 LANRLLKEETGVSDSMKWKSSRIAFVQMEQISMFLQFATKYGVPQDELFQTVDLYEEKDP 121
L N+L K S + Q+E +S F++ YG+ +LF+ DL+E +
Sbjct: 63 LMNKLQPGSVP-----KINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEANDLFESGNM 117
Query: 122 AIVYQTIKSLSRYANSKHPDLFPVIGPQLSTKRPR 156
V ++ +L+ A +K IG + S K+ R
Sbjct: 118 TQVQVSLLALAGKAKTKGLQSGVDIGVKYSEKQER 152
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,443,153
Number of Sequences: 60738
Number of extensions: 515060
Number of successful extensions: 1220
Number of sequences better than 1.0e-05: 18
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1192
Number of HSP's gapped (non-prelim): 19
length of query: 200
length of database: 30,389,216
effective HSP length: 101
effective length of query: 99
effective length of database: 24,254,678
effective search space: 2401213122
effective search space used: 2401213122
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)