ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV1602 suspect: LH Z KOG0613 Cytoskeleton Projectin/twitchin and related proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV1602 555119 554142 -326
(326 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
Hs19747267 [Z] KOG0613 Projectin/twitchin and related proteins 50 3e-06
CE07679 [T] KOG0789 Protein tyrosine phosphatase 50 6e-06
>Hs19747267 [Z] KOG0613 Projectin/twitchin and related proteins
Length = 34350
Score = 50.4 bits (119), Expect = 3e-06
Identities = 67/285 (23%), Positives = 120/285 (41%), Gaps = 76/285 (26%)
Query: 36 KMYPPRNQPNPLKVLHLPKMYPPVNQPNPLKVPHLPKMYQLMNRHRLPKLLQLAKMYPPR 95
K+ PP+ P + +P+ PP KVP +PK + + R+P+ PR
Sbjct: 11375 KIIPPKKPPTKV----VPRKEPPA------KVPEVPKKIVVEEKVRVPE--------EPR 11416
Query: 96 NQPSPLKVLHLPKMYQLMNRHRLPKLLQLAKMYPPRNQPN--PLKVLHLPK--------M 145
P+ + + PK +++ ++P PP +P P KV PK
Sbjct: 11417 VPPTKVPDVLPPK--EVVPEKKVP--------VPPAKKPEAPPPKVPEAPKEVVPEKKVP 11466
Query: 146 YPPVNQPN--PLKVPHLPKMYQLMNRHRLPKLLQLAKMYPPRNQPSPLKVLHLPKMYQLM 203
PP +P P KVP +PK + ++P+ + PP+ + P +V PK +++
Sbjct: 11467 VPPPKKPEVPPTKVPEVPK--AAVPEKKVPEAI------PPKPESPPPEVPEAPK--EVV 11516
Query: 204 NRHRLPKLLQLAKMYPPVNQPNPLKVPHLPKMYQLMNRHRLPKLLQLAKMYPPRNQPS-- 261
++P P + P+KVP PK +++ ++P PP +P
Sbjct: 11517 PEKKVP------AAPPKKPEVTPVKVPEAPK--EVVPEKKVP--------VPPPKKPEVP 11560
Query: 262 PLKVLHLPKMYQLMNRHRLPKLLQLAKMYPPRNQPSPLKVLHLPK 306
P KV +PK+ + ++P+ + PP+ + P +V P+
Sbjct: 11561 PTKVPEVPKV--AVPEKKVPEAI------PPKPESPPPEVFEEPE 11597
>CE07679 [T] KOG0789 Protein tyrosine phosphatase
Length = 650
Score = 49.7 bits (117), Expect = 6e-06
Identities = 64/260 (24%), Positives = 101/260 (38%), Gaps = 49/260 (18%)
Query: 3 PPVNQPNPLKVLHLPKMYQLMNRHRLPKLLQLAKMYPPRNQPNPLKVLHLPKMYP----- 57
PP P+P+ L N+ Q+ P + P +L +P
Sbjct: 64 PPPPPPDPITTTVPGAKTPLQNKMLSVNSGQMPNY--PMSGVKPSTTPNLANPFPNVNSV 121
Query: 58 PVNQPNPLKVPHLPKMYQLMNRHRLPK--------------LLQLAKMYPPRNQ---PSP 100
PV PNP ++P P+ ++N+ + PK L + M PP Q P+P
Sbjct: 122 PVQNPNPNQIPPAPR--PIVNQIQYPKPTNPVQNPNKLSTGLPPMTMMLPPTVQEPLPTP 179
Query: 101 LKVLHLPKMYQLMNRHRLPKL--LQLAKMYPPRNQPNPLKVLHLPKMYPPVNQPNPLKVP 158
+K LP+ +N + P++ + PP P+P ++ + + P P P +P
Sbjct: 180 VKTPPLPRPPGNLNPVQQPQIPVQRTPPQCPPPPVPHPPQITQMAPILPTSPAPPP-PIP 238
Query: 159 HLPKMYQLMNRHRLPKLLQLAKMYPPRNQPSPLKVLHLPKMYQLMNRHR-----LPKLLQ 213
H P+ Q MN LP+ QP P H P QL R +P
Sbjct: 239 HPPQRAQ-MNCLPLPQTF----------QPLP----HPPVPQQLNQRGSGQAMCVPVAAP 283
Query: 214 LAKMYPPVNQPNPLKVPHLP 233
L + P+ Q NP++ P +P
Sbjct: 284 LPAIINPITQHNPVQPPLIP 303
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.322 0.140 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,765,108
Number of Sequences: 60738
Number of extensions: 1309000
Number of successful extensions: 3725
Number of sequences better than 1.0e-05: 2
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3707
Number of HSP's gapped (non-prelim): 12
length of query: 326
length of database: 30,389,216
effective HSP length: 107
effective length of query: 219
effective length of database: 23,890,250
effective search space: 5231964750
effective search space used: 5231964750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)