ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV1695 check: MH R KOG0286 General function prediction only G-protein beta subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV1695 586289 587596 436
(436 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR212w [R] KOG0286 G-protein beta subunit 423 e-118
Hs5729852 [R] KOG0286 G-protein beta subunit 244 2e-64
Hs20336270 [R] KOG0286 G-protein beta subunit 244 2e-64
Hs11321585 [R] KOG0286 G-protein beta subunit 239 5e-63
7290895 [R] KOG0286 G-protein beta subunit 232 7e-61
CE17845 [R] KOG0286 G-protein beta subunit 220 3e-57
Hs20357529 [R] KOG0286 G-protein beta subunit 199 9e-51
Hs11055998 [R] KOG0286 G-protein beta subunit 197 2e-50
CE02186 [R] KOG0286 G-protein beta subunit 197 3e-50
Hs4504053 [R] KOG0286 G-protein beta subunit 193 5e-49
7293756 [R] KOG0286 G-protein beta subunit 191 2e-48
7293146 [R] KOG0286 G-protein beta subunit 189 7e-48
At4g34460 [R] KOG0286 G-protein beta subunit 143 6e-34
SPBC32H8.07 [R] KOG0286 G-protein beta subunit 140 3e-33
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 72 2e-12
At3g49660 [R] KOG0266 WD40 repeat-containing protein 71 4e-12
7290304 [S] KOG0310 Conserved WD40 repeat-containing protein 67 5e-11
SPBC6B1.10 [S] KOG0282 mRNA splicing factor 67 7e-11
At1g49040 [T] KOG2127 Calmodulin-binding protein CRAG contains D... 67 7e-11
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 66 1e-10
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 65 2e-10
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 65 3e-10
At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 65 3e-10
Hs13376840 [R] KOG4155 FOG: WD40 repeat 64 3e-10
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 64 6e-10
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 64 6e-10
7302603 [R] KOG0289 mRNA splicing factor 64 6e-10
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 62 1e-09
CE06090 [T] KOG0279 G protein beta subunit-like protein 62 1e-09
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 62 1e-09
7290331 [R] KOG0266 WD40 repeat-containing protein 61 4e-09
At3g18130 [T] KOG0279 G protein beta subunit-like protein 60 5e-09
Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 60 6e-09
7293188 [D] KOG0267 Microtubule severing protein katanin p80 sub... 60 6e-09
SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID su... 60 8e-09
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 59 1e-08
7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 59 1e-08
SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor an... 59 1e-08
At1g18080 [T] KOG0279 G protein beta subunit-like protein 59 1e-08
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 59 2e-08
Hs21071065 [K] KOG0263 Transcription initiation factor TFIID sub... 59 2e-08
At1g48630 [T] KOG0279 G protein beta subunit-like protein 59 2e-08
Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 s... 58 2e-08
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 57 4e-08
Hs5174447 [T] KOG0279 G protein beta subunit-like protein 57 7e-08
CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 57 7e-08
CE27149 [S] KOG0316 Conserved WD40 repeat-containing protein 57 7e-08
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 55 2e-07
CE02005 [R] KOG0288 WD40 repeat protein TipD 55 2e-07
SPCC16A11.02 [A] KOG0319 WD40-repeat-containing subunit of the 1... 55 2e-07
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 55 2e-07
CE02043 [R] KOG0289 mRNA splicing factor 55 2e-07
7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 55 2e-07
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 55 3e-07
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 55 3e-07
YBR198c [K] KOG0263 Transcription initiation factor TFIID subuni... 54 5e-07
Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 54 6e-07
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 53 8e-07
Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein 53 1e-06
At4g29830 [R] KOG4155 FOG: WD40 repeat 53 1e-06
SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein 52 1e-06
CE00901 [R] KOG0266 WD40 repeat-containing protein 52 1e-06
SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (c... 52 2e-06
SPBC1A4.07c [A] KOG0268 Sof1-like rRNA processing protein (conta... 52 2e-06
CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 52 2e-06
CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 52 2e-06
At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 52 2e-06
Hs22047819 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 51 3e-06
At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein 51 3e-06
At4g21130 [A] KOG0299 U3 snoRNP-associated protein (contains WD4... 51 3e-06
At4g02730 [R] KOG0266 WD40 repeat-containing protein 51 4e-06
At1g48870 [S] KOG0283 WD40 repeat-containing protein 51 4e-06
CE06574 [R] KOG0266 WD40 repeat-containing protein 50 7e-06
At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S ... 50 7e-06
7291072 [R] KOG0315 G-protein beta subunit-like protein (contain... 50 7e-06
YMR116c [T] KOG0279 G protein beta subunit-like protein 50 9e-06
At3g16650 [A] KOG0285 Pleiotropic regulator 1 50 9e-06
7299285 [R] KOG4155 FOG: WD40 repeat 50 9e-06
>YOR212w [R] KOG0286 G-protein beta subunit
Length = 423
Score = 423 bits (1088), Expect = e-118
Identities = 203/410 (49%), Positives = 283/410 (68%), Gaps = 25/410 (6%)
Query: 31 VEDKIRTAKTECKQLYDQINRIKGKIQDTQLMNLSHGVNSL--HELNLQPVRTLKGHNNK 88
+++KI A+ E KQL+ QIN+ K KIQD L +++ V SL +++NL+P LKGHNNK
Sbjct: 35 IQNKIEAARQESKQLHAQINKAKHKIQDASLFQMANKVTSLTKNKINLKPNIVLKGHNNK 94
Query: 89 ISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGL 148
ISD +W GF++IWD +GLK++AIPL SQWVLS AISPS LVASAGL
Sbjct: 95 ISDFRWSRDSKRILSASQDGFMLIWDSASGLKQNAIPLDSQWVLSCAISPSSTLVASAGL 154
Query: 149 DNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDMTCAMWDIPKSKR 208
+N+C++YRVS++NR+ QNV SIFKGHTCYIS EF D ILTASGDMTCA+WDIPK+KR
Sbjct: 155 NNNCTIYRVSKENRVAQNVASIFKGHTCYISDIEFTDNAHILTASGDMTCALWDIPKAKR 214
Query: 209 VTEFIDHLGDVLTMDLP-PANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVS 267
V E+ DHLGDVL + +P N+ + F + GSDGY Y+WD R P++ QSF+++DSD++
Sbjct: 215 VREYSDHLGDVLALAIPEEPNSENSSNTFASCGSDGYTYIWDSRSPSAVQSFYVNDSDIN 274
Query: 268 AIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDGXXXXXXXXXXXXXXXXSHAYS 327
A++FF +G S +AGSD+G+ ++DLRSDC I+T+S G
Sbjct: 275 ALRFFKDGMSIVAGSDNGAINMYDLRSDCSIATFSLFRGYE------------------- 315
Query: 328 RIQKNRYGXXXXXXXXYPIVKTPQSL-NFKESCIEDQGVISIDFSSSGRLMYACYADYGC 386
++ Y ++PQ+L + S +++QGV+S+DFS+SGRLMY+CY D GC
Sbjct: 316 --ERTPTPTYMAANMEYNTAQSPQTLKSTSSSYLDNQGVVSLDFSASGRLMYSCYTDIGC 373
Query: 387 AVWDIIKGEMIGKVDGHRNRINAVKTSPDGMAVVSSSWDMTLKVWTPVHQ 436
VWD++KGE++GK++GH R+ V++SPDG+AV + SWD T+K+W+P +Q
Sbjct: 374 VVWDVLKGEIVGKLEGHGGRVTGVRSSPDGLAVCTGSWDSTMKIWSPGYQ 423
>Hs5729852 [R] KOG0286 G-protein beta subunit
Length = 353
Score = 244 bits (622), Expect = 2e-64
Identities = 136/403 (33%), Positives = 213/403 (52%), Gaps = 64/403 (15%)
Query: 33 DKIRTAKTECKQLYDQINRIKGKIQDTQLMNLSHGVNSLHELNLQPVRTLKGHNNKISDV 92
+ + + K+E + L ++ + K+ D +L ++ V +L + ++ RTLKGH NK+ +
Sbjct: 10 ETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCM 69
Query: 93 KWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHC 152
W G +I+WD FT K+ A+ + WV++ A +PSG +A GLDN C
Sbjct: 70 DWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKC 129
Query: 153 SVYRVSRDNRIQQNVISIFKG---HTCYISATEFLD-ERTILTASGDMTCAMWDIPKSKR 208
SVY ++ D +N+ + K HT Y+SA F + + ILTASGD TCA+WD+ +
Sbjct: 130 SVYPLTFDK--NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQL 187
Query: 209 VTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSA 268
+ F H DVL +DL P+ T G+ F++GG D A +WD+R Q+F +SD+++
Sbjct: 188 LQSFHGHGADVLCLDLAPSET---GNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINS 244
Query: 269 IKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDGXXXXXXXXXXXXXXXXSHAYSR 328
++++ +G++F +GSDD + RL+DLR+D +++ YS
Sbjct: 245 VRYYPSGDAFASGSDDATCRLYDLRADREVAIYS-------------------------- 278
Query: 329 IQKNRYGXXXXXXXXYPIVKTPQSLNFKESCIEDQGVISIDFSSSGRLMYACYADYGCAV 388
KES I G S+DFS SGRL++A Y DY V
Sbjct: 279 ---------------------------KESII--FGASSVDFSLSGRLLFAGYNDYTINV 309
Query: 389 WDIIKGEMIGKVDGHRNRINAVKTSPDGMAVVSSSWDMTLKVW 431
WD++KG + + GH NR++ ++ SPDG A S SWD TL+VW
Sbjct: 310 WDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 352
>Hs20336270 [R] KOG0286 G-protein beta subunit
Length = 395
Score = 244 bits (622), Expect = 2e-64
Identities = 136/403 (33%), Positives = 213/403 (52%), Gaps = 64/403 (15%)
Query: 33 DKIRTAKTECKQLYDQINRIKGKIQDTQLMNLSHGVNSLHELNLQPVRTLKGHNNKISDV 92
+ + + K+E + L ++ + K+ D +L ++ V +L + ++ RTLKGH NK+ +
Sbjct: 52 ETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCM 111
Query: 93 KWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHC 152
W G +I+WD FT K+ A+ + WV++ A +PSG +A GLDN C
Sbjct: 112 DWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKC 171
Query: 153 SVYRVSRDNRIQQNVISIFKG---HTCYISATEFLD-ERTILTASGDMTCAMWDIPKSKR 208
SVY ++ D +N+ + K HT Y+SA F + + ILTASGD TCA+WD+ +
Sbjct: 172 SVYPLTFDK--NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQL 229
Query: 209 VTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSA 268
+ F H DVL +DL P+ T G+ F++GG D A +WD+R Q+F +SD+++
Sbjct: 230 LQSFHGHGADVLCLDLAPSET---GNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINS 286
Query: 269 IKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDGXXXXXXXXXXXXXXXXSHAYSR 328
++++ +G++F +GSDD + RL+DLR+D +++ YS
Sbjct: 287 VRYYPSGDAFASGSDDATCRLYDLRADREVAIYS-------------------------- 320
Query: 329 IQKNRYGXXXXXXXXYPIVKTPQSLNFKESCIEDQGVISIDFSSSGRLMYACYADYGCAV 388
KES I G S+DFS SGRL++A Y DY V
Sbjct: 321 ---------------------------KESII--FGASSVDFSLSGRLLFAGYNDYTINV 351
Query: 389 WDIIKGEMIGKVDGHRNRINAVKTSPDGMAVVSSSWDMTLKVW 431
WD++KG + + GH NR++ ++ SPDG A S SWD TL+VW
Sbjct: 352 WDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 394
>Hs11321585 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 239 bits (611), Expect = 5e-63
Identities = 137/394 (34%), Positives = 201/394 (50%), Gaps = 63/394 (15%)
Query: 39 KTECKQLYDQINRIKGKIQDTQLMNLSHGVNSLHELNLQPVRTLKGHNNKISDVKWXXXX 98
+ E +QL +QI + D L +++ ++ + + ++ RTL+GH KI + W
Sbjct: 8 RQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDS 67
Query: 99 XXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHCSVYRV- 157
G +IIWD +T K AIPL S WV++ A +PSGN VA GLDN CS+Y +
Sbjct: 68 RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
Query: 158 SRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDMTCAMWDIPKSKRVTEFIDHLG 217
+R+ ++ V GHT Y+S FLD+ I+T+SGD TCA+WDI ++ T F H G
Sbjct: 128 TREGNVR--VSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTG 185
Query: 218 DVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGES 277
DV+++ L P F++G D A LWDVR+ Q+F +SD++AI FF NG +
Sbjct: 186 DVMSLSLAPDT-----RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240
Query: 278 FMAGSDDGSARLFDLRSDCQISTYSFSDGXXXXXXXXXXXXXXXXSHAYSRIQKNRYGXX 337
F GSDD + RLFDLR+D ++ TYS +
Sbjct: 241 FATGSDDATCRLFDLRADQELMTYSHDN-------------------------------- 268
Query: 338 XXXXXXYPIVKTPQSLNFKESCIEDQGVISIDFSSSGRLMYACYADYGCAVWDIIKGEMI 397
I+ S++F +S GRL+ A Y D+ C VWD +K +
Sbjct: 269 --------IICGITSVSFSKS---------------GRLLLAGYDDFNCNVWDALKADRA 305
Query: 398 GKVDGHRNRINAVKTSPDGMAVVSSSWDMTLKVW 431
G + GH NR++ + + DGMAV + SWD LK+W
Sbjct: 306 GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
>7290895 [R] KOG0286 G-protein beta subunit
Length = 358
Score = 232 bits (592), Expect = 7e-61
Identities = 129/410 (31%), Positives = 208/410 (50%), Gaps = 60/410 (14%)
Query: 23 PNMNSAGTVEDKIRTAKTECKQLYDQINRIKGKIQDTQLMNLSHGVNSLHELNLQPVRTL 82
P N+ +K+ + E + L ++ + K+ D L N++ + + +N++P + L
Sbjct: 7 PASNANANATEKMASLVREAENLKTKLEEERQKLNDVNLSNIAERLEQIAYVNIKPRKVL 66
Query: 83 KGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNL 142
KGH K+ W G +IIWD FT K+ A+ + + W+++ A +PSGN
Sbjct: 67 KGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNF 126
Query: 143 VASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLD-ERTILTASGDMTCAMW 201
VA GLDN +VY ++ D + ++ HT Y+S + + ++ ILT SGD TCA+W
Sbjct: 127 VACGGLDNKVTVYPITSDEEMAAKKRTV-GTHTSYMSCCIYPNSDQQILTGSGDSTCALW 185
Query: 202 DIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFI 261
D+ + + F H GDV+ +DL P T G+ F++G D A++WD+R + QSF
Sbjct: 186 DVESGQLLQSFHGHSGDVMAIDLAPNET---GNTFVSGSCDRMAFIWDMRSGHVVQSFEG 242
Query: 262 SDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDGXXXXXXXXXXXXXXX 321
SDV+++KF G++ GSDD S RL+D+R+D +++ ++
Sbjct: 243 HQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFA------------------- 283
Query: 322 XSHAYSRIQKNRYGXXXXXXXXYPIVKTPQSLNFKESCIEDQGVISIDFSSSGRLMYACY 381
KES I GV S+DFS SGRL++A Y
Sbjct: 284 ----------------------------------KESII--FGVNSVDFSVSGRLLFAGY 307
Query: 382 ADYGCAVWDIIKGEMIGKVDGHRNRINAVKTSPDGMAVVSSSWDMTLKVW 431
DY +WD +K E + + GH N+++ V+ SPDG A+ + SWD T++VW
Sbjct: 308 NDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTGSWDYTIRVW 357
>CE17845 [R] KOG0286 G-protein beta subunit
Length = 356
Score = 220 bits (561), Expect = 3e-57
Identities = 127/411 (30%), Positives = 201/411 (48%), Gaps = 64/411 (15%)
Query: 26 NSAGTVEDK----IRTAKTECKQLYDQINRIKGKIQDTQLMNLSHGVNSLHELNLQPVRT 81
NS T +K + E ++L ++++ + K+ D + + ++ + L ++ R
Sbjct: 4 NSQPTTTEKGSEYLEQLANEAEELRKKLDQERHKLNDIPIQQAAERLDVMGALGVKQRRI 63
Query: 82 LKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGN 141
LKGH K+ + W G +I+WD FT K+ A+ + + WV++ A SPS
Sbjct: 64 LKGHVGKVLCMDWSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSPSSQ 123
Query: 142 LVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFL-DERTILTASGDMTCAM 200
++A GLDN CSV +S ++ I Q + HT Y+S FL + ILT SGD TCA+
Sbjct: 124 MIACGGLDNKCSVVPLSFEDDIIQKKRQVAT-HTSYMSCCTFLRSDNLILTGSGDSTCAI 182
Query: 201 WDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFF 260
WD+ + + F H GDV +D+P +T G+ FI+ G+D ++ +WD+R QSF
Sbjct: 183 WDVESGQLIQNFHGHTGDVFAIDVPKCDT---GNTFISAGADKHSLVWDIRSGQCVQSFE 239
Query: 261 ISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDGXXXXXXXXXXXXXX 320
++D++ ++F NG++F GSDD + RLFDLR+D Q+ Y
Sbjct: 240 GHEADINTVRFHPNGDAFATGSDDATCRLFDLRADRQVCVYE------------------ 281
Query: 321 XXSHAYSRIQKNRYGXXXXXXXXYPIVKTPQSLNFKESCIEDQGVISIDFSSSGRLMYAC 380
KES + + S GR+++A
Sbjct: 282 -----------------------------------KESILFPVNGVDFSLS--GRILFAG 304
Query: 381 YADYGCAVWDIIKGEMIGKVDGHRNRINAVKTSPDGMAVVSSSWDMTLKVW 431
Y DY VWD +K + GH NRI+ ++TSPDG AV S+SWD T+++W
Sbjct: 305 YGDYRVGVWDSLKCARHSVLYGHENRISCLRTSPDGTAVCSASWDCTIRIW 355
>Hs20357529 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 199 bits (505), Expect = 9e-51
Identities = 104/270 (38%), Positives = 154/270 (56%), Gaps = 8/270 (2%)
Query: 34 KIRTAKTECKQLYDQINRIKGKIQDTQLMNLSHGVNSLHELNLQPVRTLKGHNNKISDVK 93
++ + E +QL +QI + D+ L ++ G++ + + ++ RTL+GH KI +
Sbjct: 3 ELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMH 62
Query: 94 WXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHCS 153
W G +IIWD +T K AIPL S WV++ A +PSGN VA GLDN CS
Sbjct: 63 WGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICS 122
Query: 154 VYRV-SRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDMTCAMWDIPKSKRVTEF 212
+Y + +R+ ++ V GHT Y+S FLD+ I+T+SGD TCA+WDI ++ F
Sbjct: 123 IYSLKTREGNVR--VSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF 180
Query: 213 IDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFF 272
H GDV+++ L P G F++G D LWDVR Q+F +SD++A+ FF
Sbjct: 181 AGHSGDVMSLSLAPD-----GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF 235
Query: 273 NNGESFMAGSDDGSARLFDLRSDCQISTYS 302
NG +F GSDD + RLFDLR+D ++ YS
Sbjct: 236 PNGYAFTTGSDDATCRLFDLRADQELLMYS 265
>Hs11055998 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 197 bits (502), Expect = 2e-50
Identities = 104/270 (38%), Positives = 155/270 (56%), Gaps = 8/270 (2%)
Query: 34 KIRTAKTECKQLYDQINRIKGKIQDTQLMNLSHGVNSLHELNLQPVRTLKGHNNKISDVK 93
++ + E +QL +QI + D L+ ++ ++S+ + ++ RTL+GH KI +
Sbjct: 3 ELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYAMH 62
Query: 94 WXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHCS 153
W G +IIWD +T K AIPL S WV++ A +PSGN VA GLDN CS
Sbjct: 63 WGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122
Query: 154 VYRV-SRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDMTCAMWDIPKSKRVTEF 212
+Y + +R+ ++ V GHT Y+S FLD+ I+T+SGD TCA+WDI +++ T F
Sbjct: 123 IYNLKTREGNVR--VSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF 180
Query: 213 IDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFF 272
H GDV+++ L P F++G D + LWD+R QSF SD++A+ FF
Sbjct: 181 TGHSGDVMSLSLSPDM-----RTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFF 235
Query: 273 NNGESFMAGSDDGSARLFDLRSDCQISTYS 302
NG +F GSDD + RLFDLR+D ++ YS
Sbjct: 236 PNGYAFATGSDDATCRLFDLRADQELLLYS 265
>CE02186 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 197 bits (501), Expect = 3e-50
Identities = 102/265 (38%), Positives = 152/265 (56%), Gaps = 8/265 (3%)
Query: 39 KTECKQLYDQINRIKGKIQDTQLMNLSHGVNSLHELNLQPVRTLKGHNNKISDVKWXXXX 98
+ E +QL QI + DT L ++ + + + ++ RTL+GH KI + W
Sbjct: 8 RQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYAMHWASDS 67
Query: 99 XXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHCSVYRV- 157
G +I+WD +T K AIPL S WV++ A +PSG+ VA GLDN CS+Y +
Sbjct: 68 RNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLK 127
Query: 158 SRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDMTCAMWDIPKSKRVTEFIDHLG 217
+R+ ++ V GHT Y+S FLD+ I+T+SGDMTCA+WDI ++ T F H G
Sbjct: 128 TREGNVR--VSRELPGHTGYLSCCRFLDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTG 185
Query: 218 DVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGES 277
DV+++ L P FI+G D A LWD+R Q+F +SD++A+ FF +G +
Sbjct: 186 DVMSLSLSPD-----FRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNA 240
Query: 278 FMAGSDDGSARLFDLRSDCQISTYS 302
F GSDD + RLFD+R+D +++ YS
Sbjct: 241 FATGSDDATCRLFDIRADQELAMYS 265
>Hs4504053 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 193 bits (490), Expect = 5e-49
Identities = 105/265 (39%), Positives = 150/265 (55%), Gaps = 8/265 (3%)
Query: 39 KTECKQLYDQINRIKGKIQDTQLMNLSHGVNSLHELNLQPVRTLKGHNNKISDVKWXXXX 98
+ E +QL QI + D L L G+ + + ++ RTL+GH KI + W
Sbjct: 8 RQEAEQLKKQIADARKACADVTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYAMHWATDS 67
Query: 99 XXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHCSVYRV- 157
G +I+WD +T K AIPL S WV++ A +PSGN VA GLDN CS+Y +
Sbjct: 68 KLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLK 127
Query: 158 SRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDMTCAMWDIPKSKRVTEFIDHLG 217
SR+ ++ V HT Y+S FLD+ I+T+SGD TCA+WDI ++ T F+ H G
Sbjct: 128 SREGNVK--VSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTG 185
Query: 218 DVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGES 277
D +++ + P + FI+G D A LWDVR+ Q+F +SD++AI FF NGE+
Sbjct: 186 DCMSLAVSPD-----FNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEA 240
Query: 278 FMAGSDDGSARLFDLRSDCQISTYS 302
GSDD S RLFDLR+D ++ +S
Sbjct: 241 ICTGSDDASCRLFDLRADQELICFS 265
>7293756 [R] KOG0286 G-protein beta subunit
Length = 346
Score = 191 bits (485), Expect = 2e-48
Identities = 121/399 (30%), Positives = 182/399 (45%), Gaps = 68/399 (17%)
Query: 41 ECKQLYDQINRIKGKIQDTQ-------LMNLSHGVNSLHELNLQPVRTLKGHNNKISDVK 93
E ++LYD+IN + K +D Q L + + + ++ + LKGH NK++ V
Sbjct: 7 ETQKLYDEINGMIQKFKDDQKSKADCTLADKCGDMGDVPKIRFSSKKILKGHINKVNSVH 66
Query: 94 WXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHCS 153
+ G +IIWD +T K IPL S WV++ A SPSGN VA G+DN C+
Sbjct: 67 FAGDSRHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFVACGGMDNQCT 126
Query: 154 VYRV-SRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDMTCAMWDIPKSKRVTEF 212
VY V +RD ++ G+ ++S+ FLD+ ++T SGDM WD+ K + +F
Sbjct: 127 VYDVNNRDASGVAKMVKELMGYEGFLSSCRFLDDGHLITGSGDMKICHWDLEKGVKTMDF 186
Query: 213 IDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFF 272
H GD+ + L P +ITG D A LWDVR+ Q FF D DVS++ +
Sbjct: 187 NGHAGDIAGLSLSPDM-----KTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVCYH 241
Query: 273 NNGESFMAGSDDGSARLFDLRSDCQISTYSFSDGXXXXXXXXXXXXXXXXSHAYSRIQKN 332
+G F + S+D +AR++DLR+D QI+ Y
Sbjct: 242 PSGFGFASCSEDQTARMYDLRADQQIAQY------------------------------- 270
Query: 333 RYGXXXXXXXXYPIVKTPQSLNFKESCIEDQGVISIDFSSSGRLMYACYADYGCAVWDII 392
+ PQ SC S+SGR + + WD +
Sbjct: 271 ---------------EPPQKNTGFTSCA---------LSTSGRYLMCGGIEGNVHSWDTM 306
Query: 393 KGEMIGKVDGHRNRINAVKTSPDGMAVVSSSWDMTLKVW 431
K G + GH NRI + P+GM + S+SWD +++W
Sbjct: 307 KQRHTGTLSGHENRITCISLCPNGMCLASTSWDQQVRLW 345
>7293146 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 189 bits (480), Expect = 7e-48
Identities = 98/271 (36%), Positives = 154/271 (56%), Gaps = 8/271 (2%)
Query: 33 DKIRTAKTECKQLYDQINRIKGKIQDTQLMNLSHGVNSLHELNLQPVRTLKGHNNKISDV 92
+++ + + E + L + I + DT L+ + + + + ++ RTL+GH KI +
Sbjct: 2 NELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAM 61
Query: 93 KWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHC 152
W G +I+WD T K AIPL S WV++ A +PSG+ VA GLDN C
Sbjct: 62 HWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMC 121
Query: 153 SVYRV-SRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDMTCAMWDIPKSKRVTE 211
S+Y + +R+ ++ V GH Y+S FLD+ I+T+SGDM+C +WDI +VT
Sbjct: 122 SIYNLKTREGNVR--VSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTS 179
Query: 212 FIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKF 271
F+ H GDV+ + L P F++G D A LWD+R+ Q+F +SD++A+ F
Sbjct: 180 FLGHTGDVMALSLAP-----QCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTF 234
Query: 272 FNNGESFMAGSDDGSARLFDLRSDCQISTYS 302
F NG++F GSDD + RLFD+R+D +++ YS
Sbjct: 235 FPNGQAFATGSDDATCRLFDIRADQELAMYS 265
>At4g34460 [R] KOG0286 G-protein beta subunit
Length = 377
Score = 143 bits (360), Expect = 6e-34
Identities = 88/289 (30%), Positives = 144/289 (49%), Gaps = 18/289 (6%)
Query: 27 SAGTVEDKIRTAKTECKQLYDQINRIKGKIQDTQLMNLSHGVN----SLHELNLQPVRTL 82
S ++++ A L DQ+ + + ++ DT + S S +L RTL
Sbjct: 2 SVSELKERHAVATETVNNLRDQLRQRRLQLLDTDVARYSAAQGRTRVSFGATDLVCCRTL 61
Query: 83 KGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNL 142
+GH K+ + W G +I+W+ T K AI L WV++ A SP+G
Sbjct: 62 QGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQS 121
Query: 143 VASAGLDNHCSVYRVS--RDNRIQQNVISIFKGHTCYISATEFL--DERTILTASGDMTC 198
VA GLD+ CS++ +S D V + GH Y+S +++ ++ ++T+SGD TC
Sbjct: 122 VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTC 181
Query: 199 AMWDIPKSKRVTEF-----IDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQP 253
+WD+ + + F H DVL++ + +N + FI+G D A LWD R
Sbjct: 182 ILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNP----NWFISGSCDSTARLWDTRAA 237
Query: 254 NSA-QSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTY 301
+ A ++F + DV+ +KFF +G F GSDDG+ RL+D+R+ Q+ Y
Sbjct: 238 SRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVY 286
>SPBC32H8.07 [R] KOG0286 G-protein beta subunit
Length = 305
Score = 140 bits (354), Expect = 3e-33
Identities = 74/229 (32%), Positives = 120/229 (52%), Gaps = 8/229 (3%)
Query: 74 LNLQPVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLS 133
+N+Q R LK KI D+ +++WD T K + S W+++
Sbjct: 9 VNIQGTRVLKNKLGKIPDIDISTDGKYLLSASTNDVLLVWDLHTSNKVAFFEAPSVWIMT 68
Query: 134 SAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTAS 193
A SPS +A+ GL+N C VY S + ++ GH ++S +++D+ +LT S
Sbjct: 69 CAFSPSTKSIAAGGLNNFCVVYDTSVPDADPVELV----GHAGFVSCCKYVDDGHLLTGS 124
Query: 194 GDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQP 253
GD TC WDI ++K ++ H D++++D P+N F+TGG D A LWD+R
Sbjct: 125 GDKTCMFWDIEQAKAISVLKGHEMDIVSLDFLPSNPNL----FVTGGCDKLAKLWDLRAA 180
Query: 254 NSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYS 302
+F + SD+++I FF + F+ G++DG AR FD+R+ +I YS
Sbjct: 181 YCCATFPGNTSDINSISFFPSNADFVTGAEDGIARCFDIRASAEIFQYS 229
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 71.6 bits (174), Expect = 2e-12
Identities = 70/303 (23%), Positives = 122/303 (40%), Gaps = 25/303 (8%)
Query: 131 VLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFL-DERTI 189
+ ++ P G L+ S+G D +++V D +NV+++ GH+ + F D I
Sbjct: 58 IFTAEFHPEGELLLSSGFDRQIYIWQVYEDC---ENVMAM-SGHSGAVMEAHFTPDGSHI 113
Query: 190 LTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAY-LW 248
T S D T A WDI +R F H V ++ R G + GSD +W
Sbjct: 114 FTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQ-----GSRRGQQLLCSGSDDRTIKIW 168
Query: 249 DVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDGXX 308
D R+ ++A + S V+A+ F + GE ++G D +++D+R +
Sbjct: 169 DARKKHAAHTLE-SPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTI 227
Query: 309 XXXXXXXXXXXXXXSHAYSRIQKNRYGXXXXXXXXYPIVKTPQSLNFKES---CIEDQGV 365
+ + ++ + + Q NF+++ C G
Sbjct: 228 TGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQH-NFEKNLLRCAWSPGS 286
Query: 366 ISIDFSSSGRLMYACYADYGCAVWDIIKGEMIGKVDGHRNRINAVKTSPDGMAVVSSSWD 425
I S+ R +Y +WD+ ++ K+ GH +NAV SP ++S S D
Sbjct: 287 DKITSGSADRHVY---------IWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSD 337
Query: 426 MTL 428
TL
Sbjct: 338 KTL 340
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 70.9 bits (172), Expect = 4e-12
Identities = 68/308 (22%), Positives = 119/308 (38%), Gaps = 27/308 (8%)
Query: 131 VLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF-LDERTI 189
V S S G L+ASA D Y ++ N + F GH IS F D R I
Sbjct: 27 VSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFI 86
Query: 190 LTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWD 249
++AS D T +WD+ + I H ++ P + + ++G D +WD
Sbjct: 87 VSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQS-----NMIVSGSFDETVRIWD 141
Query: 250 VRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDGXXX 309
V + V+A+ F +G ++ S DG R++D + + T +
Sbjct: 142 VTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPV 201
Query: 310 XXXXXXXXXXXXXSHAYSRIQKN----RYGXXXXXXXXYPIVKTPQSLNFKESCIEDQGV 365
++ R N G + I + + L + Q
Sbjct: 202 ---------------SFVRFSPNGKFILVGTLDNTLRLWNI-SSAKFLKTYTGHVNAQYC 245
Query: 366 ISIDFS-SSGRLMYACYADYGCAVWDIIKGEMIGKVDGHRNRINAVKTSPDGMAVVSSSW 424
IS FS ++G+ + + D +W++ +++ K++GH + V P + S S
Sbjct: 246 ISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSL 305
Query: 425 DMTLKVWT 432
D T+++WT
Sbjct: 306 DKTVRIWT 313
Score = 63.2 bits (152), Expect = 8e-10
Identities = 48/237 (20%), Positives = 98/237 (41%), Gaps = 19/237 (8%)
Query: 65 SHGVNSLHELNLQPVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAI 124
++ +N++++ +PV+ GH N ISDV + + +WD TG +
Sbjct: 50 TYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTL 109
Query: 125 PLLSQWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF- 183
+ + +P N++ S D ++ V+ + + H+ ++A +F
Sbjct: 110 IGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG-----KCLKVLPAHSDPVTAVDFN 164
Query: 184 LDERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHN---FITGG 240
D I+++S D C +WD V ID + PP + R+ N + G
Sbjct: 165 RDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDD-------ENPPVSFVRFSPNGKFILVGT 217
Query: 241 SDGYAYLWDVRQPNSAQSF---FISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRS 294
D LW++ +++ + +S+ NG+ ++GS+D +++L S
Sbjct: 218 LDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNS 274
>7290304 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 535
Score = 67.0 bits (162), Expect = 5e-11
Identities = 44/162 (27%), Positives = 78/162 (47%), Gaps = 10/162 (6%)
Query: 140 GNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGD-MTC 198
G L+A+ + H ++ + +N++ +FKGHT + T F ++ L + GD +
Sbjct: 93 GRLLAAGDEEGHVKLFDTT-----SRNILRLFKGHTAPVHRTFFTADKLQLASFGDDKSV 147
Query: 199 AMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQS 258
+WD+ K V + D D + A + GH F++GG DG L+D R + Q
Sbjct: 148 RLWDVANEKVVQTYEDTHTDYVRAG---AMHPQAGHMFVSGGYDGKIKLYDTRAETAVQR 204
Query: 259 FFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQIST 300
+ V ++ F NG F++ + R++DL S C++ T
Sbjct: 205 TLDHGAPVESMLFLPNGSIFVS-AGGSQVRVWDLISGCRLLT 245
>SPBC6B1.10 [S] KOG0282 mRNA splicing factor
Length = 558
Score = 66.6 bits (161), Expect = 7e-11
Identities = 66/297 (22%), Positives = 118/297 (39%), Gaps = 21/297 (7%)
Query: 139 SGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFL-DERTILTASGDMT 197
SG+L+ S +DN ++ V D ++++ F+GH I F D R+ L+ S D T
Sbjct: 278 SGHLLLSGSMDNQIKIWEVYHD----RSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKT 333
Query: 198 CAMWDIPKSKRVTEF-IDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSA 256
+WD K + F D L + + + P + F+ G +D +D+R P+
Sbjct: 334 IKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKP----NEFLAGTADKRILQFDIRSPDIV 389
Query: 257 QSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDGXXXXXXXXXX 316
Q++ +++I F NG+ F+ SDD S R ++ + I F
Sbjct: 390 QAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPI---KFVADIAMHSMPRVA 446
Query: 317 XXXXXXSHAYSRIQKNRYGXXXXXXXXYPIVKTPQSLNFKESCIEDQGVISIDFSSSGRL 376
S A + Y Y + + FK + + FS GR
Sbjct: 447 LRPNGKSIACQSLDNCIY-----VYSAYEKYRQNKKKVFKGYSCSGYS-LEVGFSPDGRF 500
Query: 377 MYACYADYGCAVWDIIKGEMIGKVDGHRNRINAVKTSPDGMAVV--SSSWDMTLKVW 431
+++ + WD +++ K+ H + ++ P + V SS D ++K W
Sbjct: 501 VFSGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKYW 557
>At1g49040 [T] KOG2127 Calmodulin-binding protein CRAG contains DENN domain
Length = 1264
Score = 66.6 bits (161), Expect = 7e-11
Identities = 53/217 (24%), Positives = 98/217 (44%), Gaps = 18/217 (8%)
Query: 77 QPVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAI 136
Q + LKGH++++S VK G + +WD T + + + S +LS
Sbjct: 1007 QLLEELKGHDSQVSCVKMLSGERVLTAAHD-GTVKMWDVRTDMCVATVGRCSSAILSLEY 1065
Query: 137 SPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDM 196
S ++A+AG D +++ + ++ + KGHT +I + +++ T++T S D
Sbjct: 1066 DDSTGILAAAGRDTVANIWDIRSGKQMHK-----LKGHTKWIRSIRMVED-TLITGSDDW 1119
Query: 197 TCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLW--DVRQPN 254
T +W + + H G V +++ P + G ITG +DG W D
Sbjct: 1120 TARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKG-----IITGSADGLLRFWENDEGGIK 1174
Query: 255 SAQSFFISDSDVSAIKFFNNGESFMA-GSDDGSARLF 290
++ + S + +I N GE+++ G+ D S LF
Sbjct: 1175 CVKNITLHSSSILSI---NAGENWLGIGAADNSMSLF 1208
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 65.9 bits (159), Expect = 1e-10
Identities = 76/363 (20%), Positives = 129/363 (34%), Gaps = 38/363 (10%)
Query: 78 PVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTG------LKKSAIPLLSQWV 131
P+ T+KGH N +S V W I WDP G L++ P+++
Sbjct: 169 PIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCW 228
Query: 132 LSSAISPSGN--LVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTI 189
++P L+AS DN ++ V + ++ GHT I+ + + I
Sbjct: 229 QPLHLAPDSGPYLLASGSKDNTVRIWNVK-----LRTLLFTLSGHTAPITCVRWGGQNWI 283
Query: 190 LTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWD 249
++S D T +WD K + H V + L + R G AY
Sbjct: 284 YSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSG-----------AYDHT 332
Query: 250 VRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDGXXX 309
+P S + +GE ++ SDD L+D + + T
Sbjct: 333 DFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVV 392
Query: 310 XXXXXXXXXXXXXSHAYSRIQKNRYGXXXXXXXXYPIVKTPQSLNFKESCIEDQGVISID 369
+ ++ + G KT + L + V
Sbjct: 393 NHASFSPDGRCIATASFDSSVRLWDG------------KTGKFLATLRGHV--AAVYQCA 438
Query: 370 FSSSGRLMYACYADYGCAVWDIIKGEMIGKVDGHRNRINAVKTSPDGMAVVSSSWDMTLK 429
+S+ RL+ + D VWD+ +M + GH +++ AV SPDG V S D ++
Sbjct: 439 WSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVR 498
Query: 430 VWT 432
+W+
Sbjct: 499 IWS 501
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 65.5 bits (158), Expect = 2e-10
Identities = 53/224 (23%), Positives = 88/224 (38%), Gaps = 12/224 (5%)
Query: 81 TLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSG 140
TL GH +S VK+ I IW + G + I + A S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 141 NLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDE-RTILTASGDMTCA 199
NL+ SA D ++ VS + KGH+ Y+ F + I++ S D +
Sbjct: 100 NLLVSASDDKTLKIWDVS-----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 200 MWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSF 259
+WD+ K + H V + + R G ++ DG +WD ++
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAV-----HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 260 FISDS-DVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYS 302
D+ VS +KF NG+ +A + D + +L+D + TY+
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Score = 55.8 bits (133), Expect = 1e-07
Identities = 49/223 (21%), Positives = 87/223 (38%), Gaps = 21/223 (9%)
Query: 80 RTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPS 139
+T+ GH ISDV W + IWD +G + S +V +P
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 140 GNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF-LDERTILTASGDMTC 198
NL+ S D ++ V + H+ +SA F D I+++S D C
Sbjct: 141 SNLIVSGSFDESVRIWDVKTG-----KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 199 AMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHN---FITGGSDGYAYLWDVRQPNS 255
+WD + + ID D PP + ++ N + D LWD +
Sbjct: 196 RIWDTASGQCLKTLIDD-------DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 248
Query: 256 AQSFFISDSDVSAIKFFN----NGESFMAGSDDGSARLFDLRS 294
+++ ++ I F N G+ ++GS+D +++L++
Sbjct: 249 LKTYTGHKNEKYCI-FANFSVTGGKWIVSGSEDNLVYIWNLQT 290
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 64.7 bits (156), Expect = 3e-10
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 30/232 (12%)
Query: 72 HELNL------QPVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIP 125
H++NL + +L GH++ I V + G I +WD L+++ I
Sbjct: 39 HKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD----LEEAKIV 94
Query: 126 LLSQWVLSSAIS----PSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISAT 181
S+ IS P G AS LD + ++ + + + I +KGHT ++
Sbjct: 95 RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK-----KGCIHTYKGHTRGVNVL 149
Query: 182 EFL-DERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFI--T 238
F D R +++ D +WD+ K +TEF H G + ++D P H F+ T
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHP-------HEFLLAT 202
Query: 239 GGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLF 290
G +D WD+ S + V + F +G++ + G + S ++F
Sbjct: 203 GSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIF 253
Score = 58.5 bits (140), Expect = 2e-08
Identities = 37/170 (21%), Positives = 83/170 (48%), Gaps = 13/170 (7%)
Query: 139 SGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDM-- 196
S ++ + G D+ +++ + + N I +S++ GH+ I + F D +L A+G
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAI----LSLY-GHSSGIDSVTF-DASEVLVAAGAASG 81
Query: 197 TCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSA 256
T +WD+ ++K V H + +++D P +G F +G D +WD+R+
Sbjct: 82 TIKLWDLEEAKIVRTLTGHRSNCISVDFHP-----FGEFFASGSLDTNLKIWDIRKKGCI 136
Query: 257 QSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDG 306
++ V+ ++F +G ++G +D +++DL + ++ + +G
Sbjct: 137 HTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG 186
>At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 343
Score = 64.7 bits (156), Expect = 3e-10
Identities = 66/301 (21%), Positives = 111/301 (35%), Gaps = 21/301 (6%)
Query: 131 VLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFL-DERTI 189
V + +P+G L+AS D ++RV D + + KGH I + D I
Sbjct: 56 VYTMKFNPAGTLIASGSHDREIFLWRVHGDCKN----FMVLKGHKNAILDLHWTSDGSQI 111
Query: 190 LTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWD 249
++AS D T WD+ K++ + +H V + T R I+G DG A LWD
Sbjct: 112 VSASPDKTVRAWDVETGKQIKKMAEHSSFVNSC----CPTRRGPPLIISGSDDGTAKLWD 167
Query: 250 VRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDGXXX 309
+RQ + Q+ F ++A+ F + + G D +++DLR +
Sbjct: 168 MRQRGAIQT-FPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRK---------GEATMT 217
Query: 310 XXXXXXXXXXXXXSHAYSRIQKNRYGXXXXXXXXYPIVKTPQSLNFKESCIE--DQGVIS 367
S S + N P + + E ++ ++
Sbjct: 218 LEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLK 277
Query: 368 IDFSSSGRLMYACYADYGCAVWDIIKGEMIGKVDGHRNRINAVKTSPDGMAVVSSSWDMT 427
+S G + A +D +WD I K+ GH +N P + S S D
Sbjct: 278 CSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKN 337
Query: 428 L 428
+
Sbjct: 338 I 338
>Hs13376840 [R] KOG4155 FOG: WD40 repeat
Length = 305
Score = 64.3 bits (155), Expect = 3e-10
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 108 GFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNV 167
G + I+ +G K+ ++ +++LS A SP G +AS +D +++ ++ +
Sbjct: 128 GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK-----L 182
Query: 168 ISIFKGHTCYISATEFL-DERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPP 226
+ +GH I + F D + ++TAS D ++D+ + H VL + P
Sbjct: 183 LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP 242
Query: 227 ANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGS 286
+T +F++ SD +WDV +FF V +K+ NG ++ DD
Sbjct: 243 DDT-----HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQE 297
Query: 287 ARLFD 291
++D
Sbjct: 298 IHIYD 302
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 63.5 bits (153), Expect = 6e-10
Identities = 56/227 (24%), Positives = 87/227 (37%), Gaps = 21/227 (9%)
Query: 71 LHELNLQPVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFT-----GLKKSAIP 125
+ E ++ L GH+ + + G + +W T G K P
Sbjct: 528 MDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYP 587
Query: 126 LLSQWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFL- 184
V + SP G S G H V R+ + Q + IF GH ++ T F
Sbjct: 588 -----VWDTQFSPYGYYFVSGG---HDRVARLWATDHYQP--LRIFAGHLADVNCTRFHP 637
Query: 185 DERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGY 244
+ + T S D T +WD+ V F H G + ++ P GR+ TG +DG
Sbjct: 638 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP--NGRF---LATGATDGR 692
Query: 245 AYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFD 291
LWD+ V +++F +GE +GS D + RL+D
Sbjct: 693 VLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 63.5 bits (153), Expect = 6e-10
Identities = 54/230 (23%), Positives = 94/230 (40%), Gaps = 29/230 (12%)
Query: 72 HELNL------QPVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIP 125
H++NL + +L GH++ I V + G I +WD L+++ +
Sbjct: 132 HKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD----LEEAKVV 187
Query: 126 LLSQWVLSSAIS----PSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISAT 181
S+ +S P G AS LD + ++ + + + I +KGHT ++
Sbjct: 188 RTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK-----KGCIHTYKGHTRGVNVL 242
Query: 182 EFL-DERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFI--T 238
F D R I++ D +WD+ K + EF H G + ++D P H F+ T
Sbjct: 243 RFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHP-------HEFLLAT 295
Query: 239 GGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSAR 288
G +D WD+ S + V + F +G+S + G + R
Sbjct: 296 GSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQESLKR 345
Score = 54.3 bits (129), Expect = 4e-07
Identities = 33/169 (19%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 139 SGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF-LDERTILTASGDMT 197
S ++ + G D+ +++ + + N I +S++ GH+ I + F E + + T
Sbjct: 121 SSRVLVTGGEDHKVNLWAIGKPNAI----LSLY-GHSSGIDSVTFDASEGLVAAGAASGT 175
Query: 198 CAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQ 257
+WD+ ++K V H + ++++ P +G F +G D +WD+R+
Sbjct: 176 IKLWDLEEAKVVRTLTGHRSNCVSVNFHP-----FGEFFASGSLDTNLKIWDIRKKGCIH 230
Query: 258 SFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDG 306
++ V+ ++F +G ++G +D +++DL + + + +G
Sbjct: 231 TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG 279
>7302603 [R] KOG0289 mRNA splicing factor
Length = 505
Score = 63.5 bits (153), Expect = 6e-10
Identities = 55/228 (24%), Positives = 92/228 (40%), Gaps = 47/228 (20%)
Query: 118 GLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCY 177
GL +++P + ++SA + + + G D + +V+ N+ + +++I KGHT
Sbjct: 216 GLHSASVPGILALDINSA---DHSKILTGGNDKNATVF-----NKDTEQMVAILKGHTKK 267
Query: 178 ISATEFL-DERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPA--------- 227
I+ + +E T++T S DM +W +P S+ H G V + L P
Sbjct: 268 ITKVIYHPNEDTVITGSPDMNIRIWHVPTSQTQLLLRCHEGPVTGLSLHPTGDYLLSTSS 327
Query: 228 ---------NTGRY--------------------GHNFITGGSDGYAYLWDVRQPNSAQS 258
TGR G F TG D +WD+++ ++ +
Sbjct: 328 DKHWAFSDIRTGRLLTKVIDTAEVGLTTAQFHPDGLIFGTGTVDSQVKIWDLKEQSNVAN 387
Query: 259 FFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDG 306
F +SAI F NG +DD +L+DLR T DG
Sbjct: 388 FPGHTGPISAISFSENGYYLATAADDACVKLWDLRKLKNFKTIQLDDG 435
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 62.4 bits (150), Expect = 1e-09
Identities = 62/322 (19%), Positives = 116/322 (35%), Gaps = 69/322 (21%)
Query: 112 IWDPFTGLKKSAIPLLSQWVLSSAIS-PSGNLVASAGLDNHCSVYRVSRDNRIQQNVISI 170
+WD +G + + + V + A + P G+ +A+ D C ++ V
Sbjct: 35 LWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGK-----CYHT 89
Query: 171 FKGHTCYISATEFLDERTIL-TASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANT 229
F+GHT I F + T++ T S D T +WDI + V H +++++ NT
Sbjct: 90 FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF---NT 146
Query: 230 GRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARL 289
G ITG D +WD +++S+ F + + GS D + +L
Sbjct: 147 S--GDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKL 204
Query: 290 FDLRSDCQISTYSFSDGXXXXXXXXXXXXXXXXSHAYSRIQKNRYGXXXXXXXXYPIVKT 349
+D + ++T + D
Sbjct: 205 WDATNGKCVATLTGHDD------------------------------------------- 221
Query: 350 PQSLNFKESCIEDQGVISIDFSSSGRLMYACYADYGCAVWDIIKGEMIGKVDGHRNRINA 409
+SC + G +L+ AD ++ + I K++GH I+
Sbjct: 222 ----EILDSCFDYTG----------KLIATASADGTARIFSAATRKCIAKLEGHEGEISK 267
Query: 410 VKTSPDGMAVVSSSWDMTLKVW 431
+ +P G +++ S D T ++W
Sbjct: 268 ISFNPQGNHLLTGSSDKTARIW 289
Score = 51.6 bits (122), Expect = 2e-06
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 11/178 (6%)
Query: 75 NLQPVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSS 134
N + V TL+GH+ +I + + +++WD TG K + + + S+
Sbjct: 125 NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSA 184
Query: 135 AISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF-LDERTILTAS 193
+ + +L+ + +D C ++ + ++ GH I + F + I TAS
Sbjct: 185 SFNWDCSLILTGSMDKTCKLWDATNG-----KCVATLTGHDDEILDSCFDYTGKLIATAS 239
Query: 194 GDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVR 251
D T ++ K + + H G++ + P G++ +TG SD A +WD +
Sbjct: 240 ADGTARIFSAATRKCIAKLEGHEGEISKISFNP-----QGNHLLTGSSDKTARIWDAQ 292
>CE06090 [T] KOG0279 G protein beta subunit-like protein
Length = 325
Score = 62.4 bits (150), Expect = 1e-09
Identities = 54/226 (23%), Positives = 93/226 (40%), Gaps = 16/226 (7%)
Query: 77 QPVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAI 136
+PVR+L GHN+ +SDV + +WD G+ ++ VLS A
Sbjct: 60 RPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAF 119
Query: 137 SPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKG-HTCYISATEFLD---ERTILTA 192
S + S D ++ N + Q +I HT ++S F + I++A
Sbjct: 120 SADNRQIVSGSRDKSIKLW-----NTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSA 174
Query: 193 SGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQ 252
D +W++ + T I H G V T+ + P G +GG DG A LWD+ +
Sbjct: 175 GWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPD-----GSLCASGGKDGQAMLWDLNE 229
Query: 253 PNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQI 298
+ + +DV F+ ++ + S +++DL +I
Sbjct: 230 --GKHLYTLPGNDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEI 273
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 62.4 bits (150), Expect = 1e-09
Identities = 54/214 (25%), Positives = 84/214 (39%), Gaps = 27/214 (12%)
Query: 81 TLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWD--------PFTGLKKSAIPLLSQWVL 132
+L GH + + V + G I +WD FTG + + +
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAV------ 55
Query: 133 SSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFL-DERTILT 191
P G +AS D + V+ D R ++ I +KGHT IS EF D R +++
Sbjct: 56 --EFHPFGEFLASGSSDTNLRVW----DTR-KKGCIQTYKGHTRGISTIEFSPDGRWVVS 108
Query: 192 ASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVR 251
D +WD+ K + EF H G + ++D P TG +D WD+
Sbjct: 109 GGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLE-----FLLATGSADRTVKFWDLE 163
Query: 252 QPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDG 285
+ + V AI F +G++ G DDG
Sbjct: 164 TFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDG 197
Score = 52.0 bits (123), Expect = 2e-06
Identities = 31/135 (22%), Positives = 59/135 (42%), Gaps = 6/135 (4%)
Query: 173 GHTCYISATEFLDERTILTASGDM-TCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGR 231
GHT + + F E ++ A +WD+ +SK V F H + ++ P
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHP----- 59
Query: 232 YGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFD 291
+G +G SD +WD R+ Q++ +S I+F +G ++G D +++D
Sbjct: 60 FGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWD 119
Query: 292 LRSDCQISTYSFSDG 306
L + + + +G
Sbjct: 120 LTAGKLLHEFKCHEG 134
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 60.8 bits (146), Expect = 4e-09
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 12/224 (5%)
Query: 81 TLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSG 140
TL GH +S VK+ I IW + G + I + A S
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 126
Query: 141 NLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDE-RTILTASGDMTCA 199
L+ S D V+ +S ++ KGH+ Y+ F + I++ S D +
Sbjct: 127 RLLVSGSDDKTLKVWELSTGKSLK-----TLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 181
Query: 200 MWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSF 259
+WD+ K + H V + + R G ++ DG +WD ++
Sbjct: 182 IWDVRTGKCLKTLPAHSDPVSAV-----HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 236
Query: 260 FISDS-DVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYS 302
D+ VS +KF NG+ +A + D + +L+D + TY+
Sbjct: 237 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT 280
Score = 57.0 bits (136), Expect = 5e-08
Identities = 49/223 (21%), Positives = 87/223 (38%), Gaps = 21/223 (9%)
Query: 80 RTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPS 139
+T+ GH ISDV W + +W+ TG + S +V +P
Sbjct: 108 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ 167
Query: 140 GNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF-LDERTILTASGDMTC 198
NL+ S D ++ V + H+ +SA F D I+++S D C
Sbjct: 168 SNLIVSGSFDESVRIWDVRTG-----KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 222
Query: 199 AMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHN---FITGGSDGYAYLWDVRQPNS 255
+WD + + ID D PP + ++ N + D LWD +
Sbjct: 223 RIWDTASGQCLKTLIDD-------DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 275
Query: 256 AQSFFISDSDVSAIKFFN----NGESFMAGSDDGSARLFDLRS 294
+++ ++ I F N G+ ++GS+D +++L+S
Sbjct: 276 LKTYTGHKNEKYCI-FANFSVTGGKWIVSGSEDNMVYIWNLQS 317
>At3g18130 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 60.5 bits (145), Expect = 5e-09
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 13/218 (5%)
Query: 80 RTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPS 139
R L GH++ + DV G + +WD TG ++ VLS A S
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116
Query: 140 GNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDER---TILTASGDM 196
+ SA D ++ + + IS GH ++S F TI++AS D
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKY---TISEGDGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 197 TCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSA 256
T +W++ K + H G + T+ + P G +GG DG LWD+ +
Sbjct: 174 TVKVWNLQNCKLRNSLVGHSGYLNTVAVSPD-----GSLCASGGKDGVILLWDLAEGKKL 228
Query: 257 QSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRS 294
S + + F+ ++ + + S R++DL S
Sbjct: 229 YS--LEAGSIIHSLCFSPNRYWLCAATENSIRIWDLES 264
>Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 514
Score = 60.1 bits (144), Expect = 6e-09
Identities = 54/231 (23%), Positives = 88/231 (37%), Gaps = 11/231 (4%)
Query: 81 TLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSG 140
TL H I +KW IIWD TG K P S L S
Sbjct: 261 TLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-SN 319
Query: 141 NLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTA-SGDMTCA 199
N AS D V ++ +D I+ F+GHT ++A ++ +L + S DMT
Sbjct: 320 NTFASCSTDMCIHVCKLGQDRPIKT-----FQGHTNEVNAIKWDPTGNLLASCSDDMTLK 374
Query: 200 MWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHN----FITGGSDGYAYLWDVRQPNS 255
+W + + V + H ++ T+ P G N + D LWDV +
Sbjct: 375 IWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGIC 434
Query: 256 AQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDG 306
+ V ++ F +G +GS D +++ ++ + +Y + G
Sbjct: 435 IHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG 485
>7293188 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 296
Score = 60.1 bits (144), Expect = 6e-09
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 81 TLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSG 140
+L GHN I V++ G I WD + S + + V + +PSG
Sbjct: 55 SLTGHNRSIDCVRFAYKDNFVYSADDIGIIRRWDLNSQKIYSTLNGHMKSVRTLDFNPSG 114
Query: 141 NLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTASG-DMTCA 199
V S D ++ V +N N I + +GH ++++ +F + + ++G + +
Sbjct: 115 EYVVSGSNDTTVRLWDVQNEN----NCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSIL 170
Query: 200 MWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDV-RQPNSAQS 258
+WDI KSK++ EFI D + + G DG ++D+ Q +Q+
Sbjct: 171 IWDIRKSKQIMEFI---ADPPVTAITCVQFHPFEFLLAAGRVDGTVSIYDLEHQQLVSQT 227
Query: 259 FFISDSDVSAIKFFNNGESFMAGSDDG 285
+ I F +NGE GS G
Sbjct: 228 THFYGQAIRCITFSDNGECLFVGSSSG 254
Score = 49.7 bits (117), Expect = 9e-06
Identities = 38/173 (21%), Positives = 73/173 (41%), Gaps = 12/173 (6%)
Query: 131 VLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTIL 190
V S + +G ++ + G D + +++ + Q GH I F + +
Sbjct: 21 VTSLDLGETGRVLVTGGEDRNVNLWAIG-----QNECFMSLTGHNRSIDCVRFAYKDNFV 75
Query: 191 TASGDM-TCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWD 249
++ D+ WD+ K + H+ V T+D P+ G ++G +D LWD
Sbjct: 76 YSADDIGIIRRWDLNSQKIYSTLNGHMKSVRTLDFNPS-----GEYVVSGSNDTTVRLWD 130
Query: 250 VRQPNSAQSFFISD-SDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTY 301
V+ N+ S V+++KF +G + +GS ++D+R QI +
Sbjct: 131 VQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIMEF 183
>SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 642
Score = 59.7 bits (143), Expect = 8e-09
Identities = 50/180 (27%), Positives = 80/180 (43%), Gaps = 11/180 (6%)
Query: 119 LKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYI 178
L+KS++ ++ V +ISP + S D ++ S+D + + I + GH I
Sbjct: 394 LQKSSLIGHTRPVFGVSISPQKEFILSCSEDGFTRLW--SKDTK---STIVKYAGHNAPI 448
Query: 179 SATEFLD-ERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFI 237
+F TAS D T +WD+ + + F+ H DV + P Y
Sbjct: 449 WDVQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHP--NAAY---LA 503
Query: 238 TGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQ 297
TG SD +WDVR + + F S VSA+ +G S + + G +++DLRS Q
Sbjct: 504 TGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQ 563
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 59.3 bits (142), Expect = 1e-08
Identities = 54/232 (23%), Positives = 89/232 (38%), Gaps = 13/232 (5%)
Query: 81 TLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSG 140
TL H I +KW IIWD TG K P S L +
Sbjct: 271 TLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD--VDWQN 328
Query: 141 NLV-ASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTA-SGDMTC 198
N+ AS D V R+ D+ ++ F+GHT ++A ++ +L + S DMT
Sbjct: 329 NMTFASCSTDMCIHVCRLGCDHPVKT-----FQGHTNEVNAIKWDPSGMLLASCSDDMTL 383
Query: 199 AMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHN----FITGGSDGYAYLWDVRQPN 254
+W + + V + H ++ T+ P N + D LWDV Q
Sbjct: 384 KIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGV 443
Query: 255 SAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDG 306
+ V ++ F +G+ +GS D +++ +S + +Y + G
Sbjct: 444 CTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSYQGTGG 495
>7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 436
Score = 59.3 bits (142), Expect = 1e-08
Identities = 57/266 (21%), Positives = 105/266 (39%), Gaps = 24/266 (9%)
Query: 171 FKGHTCYISATEF--LDERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPAN 228
F GHT + A EF +D ++I TAS D + ++D+ S + + H +V+ A
Sbjct: 189 FYGHTAELVAAEFHPVDGKSIATASLDGSARIYDVETSHELQQLTHHGAEVIA-----AR 243
Query: 229 TGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSAR 288
R G +TG D A +WDVR + +++S + +G GS D +AR
Sbjct: 244 FNRDGQMLLTGSFDHSAAIWDVRSKSLGHQLRGHSAELSNCVWNFSGSLIATGSLDNTAR 303
Query: 289 LFDLR---SDCQISTYSFSDGXXXXXXXXXXXXXXXXSHAYSRIQKNRYGXXXXXXXXYP 345
++D R + ++ + S +R+ +
Sbjct: 304 IWDTRKLDQELYLAARHSDEVLDVSFDAAGQLLATCSSDCTARVWRLEGSSEL------- 356
Query: 346 IVKTPQSLNFKESCIEDQGVISIDFSSSGRLMYACYADYGCAVWDIIKGEMIGKVDGHRN 405
+ L+ ++ V + FS SG ++ AD +W G+ + GH
Sbjct: 357 -----EMLSLMAGHSDE--VSKVCFSPSGCMLLTASADNTARLWLTESGQCSQVLAGHEG 409
Query: 406 RINAVKTSPDGMAVVSSSWDMTLKVW 431
+ + S G A++++S D + + W
Sbjct: 410 EVFSCAYSYAGDAILTASKDNSCRFW 435
>SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 340
Score = 58.9 bits (141), Expect = 1e-08
Identities = 64/302 (21%), Positives = 115/302 (37%), Gaps = 24/302 (7%)
Query: 131 VLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTIL 190
VL + PSG+ AS G+D ++ V D + V++ KG + + D R +
Sbjct: 53 VLVARFDPSGSYFASGGMDRQILLWNVFGDVK-NYGVLNGCKGAITDLQWSR--DSRVVY 109
Query: 191 TASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAY-LWD 249
+S D WD +++ + H G V +D+ + G +T SD +WD
Sbjct: 110 CSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVL-----KVGSELLTSVSDDCTMKVWD 164
Query: 250 VRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSD-CQISTYSFSDGXX 308
R + ++ ++A+ G G DG+ +++DLR++ C D
Sbjct: 165 SRSKDCIKTIE-EKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKD--- 220
Query: 309 XXXXXXXXXXXXXXSHAYSRIQKNRYGXXXXXXXXYPIVKTPQSLNFKESCI--EDQGVI 366
S S + N P + L E I ++ ++
Sbjct: 221 -------IITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLL 273
Query: 367 SIDFSSSGRLMYACYADYGCAVWDIIKGEMIGKVDGHRNRINAVKTSPDGMAVVSSSWDM 426
+ +S + R + A +D VW G++ + GH +N V P ++S S D
Sbjct: 274 GVAWSRNSRFVGAGSSDKNVYVWS-ATGDLRYVLPGHEGSVNHVDFHPHQDIILSCSSDR 332
Query: 427 TL 428
T+
Sbjct: 333 TI 334
>At1g18080 [T] KOG0279 G protein beta subunit-like protein
Length = 327
Score = 58.9 bits (141), Expect = 1e-08
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 12/218 (5%)
Query: 80 RTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPS 139
R L GH++ + DV G + +WD G+ ++ VLS A S
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLD 116
Query: 140 GNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLD---ERTILTASGDM 196
+ SA D ++ + + + +GH ++S F + TI++AS D
Sbjct: 117 NRQIVSASRDRTIKLWNTLGE--CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK 174
Query: 197 TCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSA 256
T +W++ K + H G V T+ + P G +GG DG LWD+ +
Sbjct: 175 TVKVWNLSNCKLRSTLAGHTGYVSTVAVSPD-----GSLCASGGKDGVVLLWDLAEGKKL 229
Query: 257 QSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRS 294
S ++S + A+ F N A ++ G +++DL S
Sbjct: 230 YS-LEANSVIHALCFSPNRYWLCAATEHG-IKIWDLES 265
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 58.5 bits (140), Expect = 2e-08
Identities = 49/223 (21%), Positives = 88/223 (38%), Gaps = 21/223 (9%)
Query: 80 RTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPS 139
+TL GHN +ISDV W + +WD +G + S +V +P
Sbjct: 77 KTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPP 136
Query: 140 GNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF-LDERTILTASGDMTC 198
NL+ S D ++ V + H+ +SA F I++ S D C
Sbjct: 137 SNLIISGSFDETVKIWEVKTG-----KCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLC 191
Query: 199 AMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHN---FITGGSDGYAYLWDVRQPNS 255
+WD + + +D D PP + ++ N +T D LWD +
Sbjct: 192 RIWDAASGQCLKTLVDD-------DNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRC 244
Query: 256 AQSFFISDSDVSAIKFFN----NGESFMAGSDDGSARLFDLRS 294
+++ ++ I F N G+ ++GS+D +++L++
Sbjct: 245 LKTYTGQKNEKYCI-FANFSVTGGKWIVSGSEDNLVYIWNLQT 286
Score = 57.4 bits (137), Expect = 4e-08
Identities = 49/224 (21%), Positives = 86/224 (37%), Gaps = 12/224 (5%)
Query: 81 TLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSG 140
TL GH +S VK+ IIIW + G + + + + A S
Sbjct: 36 TLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDS 95
Query: 141 NLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF-LDERTILTASGDMTCA 199
+ + SA D ++ V + KGH+ Y+ F I++ S D T
Sbjct: 96 SRLVSASDDKTLKLWDVR-----SGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVK 150
Query: 200 MWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSF 259
+W++ K + H V + + G ++G DG +WD ++
Sbjct: 151 IWEVKTGKCLKTLSAHSDPVSAVHFNCS-----GSLIVSGSYDGLCRIWDAASGQCLKTL 205
Query: 260 FISDS-DVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYS 302
D+ VS +KF NG+ + + D + +L+D + TY+
Sbjct: 206 VDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT 249
>Hs21071065 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 745
Score = 58.5 bits (140), Expect = 2e-08
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 168 ISIFKGHTCYISATEFL-DERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPP 226
+ IF GH ++ T F + + T S D T +WD+ V F H G + ++ P
Sbjct: 565 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 624
Query: 227 ANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGS 286
GR+ TG +DG LWD+ V +++F +GE +GS D +
Sbjct: 625 --NGRF---LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNT 679
Query: 287 ARLFD 291
RL+D
Sbjct: 680 VRLWD 684
>At1g48630 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 58.5 bits (140), Expect = 2e-08
Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 13/218 (5%)
Query: 80 RTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPS 139
R + GH++ + DV G + +WD TG ++ VLS A S
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116
Query: 140 GNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDER---TILTASGDM 196
+ SA D ++ + + IS GH ++S F TI++AS D
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKY---TISEADGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 197 TCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSA 256
T +W++ K H G + T+ + P G +GG DG LWD+ +
Sbjct: 174 TVKVWNLQNCKLRNTLAGHSGYLNTVAVSPD-----GSLCASGGKDGVILLWDLAEGKKL 228
Query: 257 QSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRS 294
S + + F+ ++ + + S R++DL S
Sbjct: 229 YS--LEAGSIIHSLCFSPNRYWLCAATENSIRIWDLES 264
>Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 655
Score = 58.2 bits (139), Expect = 2e-08
Identities = 44/207 (21%), Positives = 80/207 (38%), Gaps = 11/207 (5%)
Query: 79 VRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISP 138
+ +L GH + + V+ G I +WD + L + S P
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGLKANICSLDFHP 115
Query: 139 SGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFL-DERTILTASGDMT 197
G VAS D + ++ + R + + ++GH+ + F D + + +A+ D T
Sbjct: 116 YGEFVASGSQDTNIKLWDIRR-----KGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHT 170
Query: 198 CAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQ 257
+WD+ K ++EF H G V ++ P + +G SDG WD+ +
Sbjct: 171 VKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE-----YLLASGSSDGTIRFWDLEKFQVVS 225
Query: 258 SFFISDSDVSAIKFFNNGESFMAGSDD 284
V ++ F +G +G D
Sbjct: 226 RIEGEPGPVRSVLFNPDGCCLYSGCQD 252
Score = 53.9 bits (128), Expect = 5e-07
Identities = 40/176 (22%), Positives = 78/176 (43%), Gaps = 14/176 (7%)
Query: 127 LSQWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF-LD 185
+S VL A SG L+A+ G D +++ +++ N I GHT + +
Sbjct: 23 VSSLVLGKA---SGRLLATGGDDCRVNLWSINKPNCIMS-----LTGHTSPVESVRLNTP 74
Query: 186 ERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYA 245
E I+ S + +WD+ +K + + ++ ++D P YG +G D
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAKILRTLMGLKANICSLDFHP-----YGEFVASGSQDTNI 129
Query: 246 YLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTY 301
LWD+R+ + V ++F +G+ + +DD + +L+DL + +S +
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF 185
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 57.4 bits (137), Expect = 4e-08
Identities = 36/174 (20%), Positives = 75/174 (42%), Gaps = 11/174 (6%)
Query: 139 SGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFK-----GHTCYISATEFLD-ERTILTA 192
+ L + G D +++ + + + +N F GHT + + F E +L
Sbjct: 47 TSRLFITGGDDYKVNLWAIGKPTSLMKNDAIAFYWQSLCGHTSAVDSVAFDSAEVLVLAG 106
Query: 193 SGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQ 252
+ +WD+ ++K V F H + ++ P +G +G SD +WD+R+
Sbjct: 107 ASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHP-----FGEFLASGSSDANLKIWDIRK 161
Query: 253 PNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDG 306
Q++ +S I+F +G ++G D +++DL + + + F +G
Sbjct: 162 KGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEG 215
Score = 50.1 bits (118), Expect = 7e-06
Identities = 41/180 (22%), Positives = 69/180 (37%), Gaps = 27/180 (15%)
Query: 80 RTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWD--------PFTGLKKSAIPLLSQWV 131
++L GH + + V + G I +WD FTG + + +
Sbjct: 82 QSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAV----- 136
Query: 132 LSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFL-DERTIL 190
P G +AS D + ++ + + IQ +KGH+ IS F D R ++
Sbjct: 137 ---EFHPFGEFLASGSSDANLKIWDIRKKGCIQT-----YKGHSRGISTIRFTPDGRWVV 188
Query: 191 TASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDV 250
+ D +WD+ K + EF H G + ++D P TG +D WD+
Sbjct: 189 SGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLE-----FLLATGSADRTVKFWDL 243
>Hs5174447 [T] KOG0279 G protein beta subunit-like protein
Length = 317
Score = 56.6 bits (135), Expect = 7e-08
Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 28/225 (12%)
Query: 78 PVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAIS 137
P R L+GH++ +SDV G + +WD TG ++ VLS A S
Sbjct: 55 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS 114
Query: 138 PSGNLVASAGLDNHCSVYRVSRDNRIQ-QNVISIFK------GHTCYISATEFLDERT-- 188
+ S SRD I+ N + + K H+ ++S F +
Sbjct: 115 SDNRQIVSG-----------SRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 163
Query: 189 -ILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYL 247
I++ D +W++ K T I H G + T+ + P G +GG DG A L
Sbjct: 164 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPD-----GSLCASGGKDGQAML 218
Query: 248 WDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDL 292
WD+ + + + D+ F+ ++ + S +++DL
Sbjct: 219 WDLNE--GKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDL 261
>CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 56.6 bits (135), Expect = 7e-08
Identities = 63/303 (20%), Positives = 116/303 (37%), Gaps = 25/303 (8%)
Query: 131 VLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF-LDERTI 189
+ +S S G+ +ASAG D ++ V + ++ KGH I +F D +
Sbjct: 39 IYTSQFSSDGSFLASAGYDQQIFLWNVFG----ECENFAVLKGHKGAIMEVKFNADSSHL 94
Query: 190 LTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGS-DGYAYLW 248
++A D T +WD+ + F H V ++D+ R G I S DG +
Sbjct: 95 VSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDV-----NRRGPQMICSASDDGTVMVH 149
Query: 249 DVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFD-LRSDCQISTYSFSDGX 307
D+R +A+ FI +A+ F + ++ + G D +++D LR+D + D
Sbjct: 150 DMRSKEAAKK-FICKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLSGHRD-- 206
Query: 308 XXXXXXXXXXXXXXXSHAYSRIQKNRYGXXXXXXXXYPIVKTPQSLNFKESCIE--DQGV 365
SH + + N P V + + + ++ +
Sbjct: 207 --------TITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNL 258
Query: 366 ISIDFSSSGRLMYACYADYGCAVWDIIKGEMIGKVDGHRNRINAVKTSPDGMAVVSSSWD 425
+ +S + A AD VW+ + K+ GH +N P ++S+ D
Sbjct: 259 LKCGWSPRDNYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGSD 318
Query: 426 MTL 428
T+
Sbjct: 319 KTI 321
>CE27149 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 305
Score = 56.6 bits (135), Expect = 7e-08
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 25/197 (12%)
Query: 112 IWDPFTGLKKSAIPLLS---QWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVI 168
+W+P LK S + S VL +A S + +A+ G D C+V+ V ++++
Sbjct: 42 LWNP---LKSSLLKTYSGTGNEVLDAASSSDNSQIAAGGADRACTVFDVETGKQLRR--- 95
Query: 169 SIFKGHTCYISATEFLDERTILTASGDMTCAMWDIP----KSKRVTEFIDHLGDVLTMDL 224
++ H ++A F +E +++ SG M C M K + F + +L++D+
Sbjct: 96 --WRTHGAQVNAVAFNEESSVV-FSGSMDCTMQAFDCRSRSEKPIQIFNESTDGILSIDV 152
Query: 225 PPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDD 284
GH + G +DG ++ +R N ++ DS V+++ F + +AG
Sbjct: 153 -------NGHEIVAGSADGNYRVYSIRDGNMTVD-YMGDS-VNSVSFTPDSNCLLAGVMG 203
Query: 285 GSARLFDLRSDCQISTY 301
G RL D S +++Y
Sbjct: 204 GIVRLIDKSSGKLLASY 220
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 55.5 bits (132), Expect = 2e-07
Identities = 66/313 (21%), Positives = 106/313 (33%), Gaps = 50/313 (15%)
Query: 129 QWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNV--------------------- 167
Q + ++ ISP L+A AG DN C R +++
Sbjct: 269 QLLNTAEISPDSKLLA-AGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDILEEEDDE 327
Query: 168 -------ISIFKGHTCYISATEFL-DERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDV 219
+ I +GH + +T FL D +L+ S DM+ WD+ + H V
Sbjct: 328 DDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPV 387
Query: 220 LTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFM 279
+D+ P Y F +G D A LW + + + +DV +KF N
Sbjct: 388 WDLDISP-----YSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLA 442
Query: 280 AGSDDGSARLFDLRSDCQISTYSFSDGXXXXXXXXXXXXXXXXSHAYSRIQKNRYGXXXX 339
GS D + RL+ + + ++ G S A+S +Y
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFTGHRG-------------PVLSLAFS--PNGKYLASAG 487
Query: 340 XXXXYPIVKTPQSLNFKESCIEDQGVISIDFSSSGRLMYACYADYGCAVWDIIKGEMIGK 399
+ +KE + S+ FS L+ + D VWDI
Sbjct: 488 EDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAP 547
Query: 400 VDGHRNRINAVKT 412
DG + + V T
Sbjct: 548 ADGSSSELVGVYT 560
>CE02005 [R] KOG0288 WD40 repeat protein TipD
Length = 464
Score = 55.5 bits (132), Expect = 2e-07
Identities = 65/317 (20%), Positives = 116/317 (36%), Gaps = 33/317 (10%)
Query: 82 LKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGN 141
L H+ ++ DV+W + IW K+ +S LS + P
Sbjct: 171 LSTHDGEVHDVEWMSDDTFATAGSDSK-VQIWR--VSPNKTDASKVS--TLSGCLGPVNR 225
Query: 142 L---------VASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTA 192
L +AS+ D C ++ + Q ++S F GHT +S+ +++
Sbjct: 226 LDYDSQRHVCLASSN-DKTCRLWNID-----SQRLLSTFSGHTDKVSSARLFQSHNVISG 279
Query: 193 SGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQ 252
S D T WDI + + ++ +G + D+ A G +FI+ D WD R
Sbjct: 280 SADRTIKNWDISSIRCLKSYL--VGSTV-FDI-VAKCGVSQSSFISSHFDKKVRFWDARS 335
Query: 253 PNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDGXXXXXX 312
++ S + VS++ +G +A S D + L D+R+ I YS
Sbjct: 336 SDATYSVELGQK-VSSLDISMDGLQVLASSRDDTLSLIDVRNYGIIHLYSAEQYKTSCDS 394
Query: 313 XXXXXXXXXXSHAYSRIQKNRYGXXXXXXXXYPIVKTPQSLNFKESCIEDQGVISIDFSS 372
+ + +VKT +S + ++S+ ++
Sbjct: 395 TRAIFSSTGEYVLAGSSNSSVFIWNTKTTKLEKVVKTARS--------DSAQIMSLAWNP 446
Query: 373 SGRLMYACYADYGCAVW 389
SGR + AC C +W
Sbjct: 447 SGRGLLACDRQKTCTLW 463
>SPCC16A11.02 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 181
Score = 55.1 bits (131), Expect = 2e-07
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 165 QNVISIFKGHTCYISATEFL-DERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMD 223
+ + SI K Y++A D + ++ A +++IP +R+ H V+TM
Sbjct: 51 ERLFSIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMT 110
Query: 224 LPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFM--AG 281
+ P NT TGG++G +WD+ SF +SA+ F + +++ +G
Sbjct: 111 IDPTNT-----LLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASG 165
Query: 282 SDDGSARLFDLRS 294
+DD RL+DL S
Sbjct: 166 ADDSRVRLWDLNS 178
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 55.1 bits (131), Expect = 2e-07
Identities = 44/219 (20%), Positives = 87/219 (39%), Gaps = 14/219 (6%)
Query: 78 PVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSA-IPLLSQWVLSSAI 136
P+ L GH ++ K+ I++W+ + A + S V+
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 117
Query: 137 SPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISAT--EFLDERTILTASG 194
+ G+++ SA D +V+ R+++ KGHT ++++ + + T S
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKR-----LKGHTSFVNSCYPARKSPQLVCTGSD 172
Query: 195 DMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPN 254
D T +WDI K + F + T + I+GG D +WD+RQ
Sbjct: 173 DGTVKLWDIRKKAAIQTFQN------TYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 226
Query: 255 SAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLR 293
+ V+ + + G ++ + D + R++D+R
Sbjct: 227 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
>CE02043 [R] KOG0289 mRNA splicing factor
Length = 509
Score = 55.1 bits (131), Expect = 2e-07
Identities = 41/184 (22%), Positives = 74/184 (39%), Gaps = 8/184 (4%)
Query: 77 QPVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAI 136
Q ++T KGHN KI+ V I +W K+ I + V ++
Sbjct: 259 QVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDISL 318
Query: 137 SPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTIL-TASGD 195
+ SG+ + SA D++ + + + + +S+ G + + EF + I T + D
Sbjct: 319 NASGDYILSASDDSYWAFSDIRSGKSLCK--VSVEPGSQIAVHSIEFHPDGLIFGTGAAD 376
Query: 196 MTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNS 255
+WD+ F H V ++ G+ TG DG LWD+R+ +
Sbjct: 377 AVVKIWDLKNQTVAAAFPGHTAAVRSIAF-----SENGYYLATGSEDGEVKLWDLRKLKN 431
Query: 256 AQSF 259
++F
Sbjct: 432 LKTF 435
>7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 700
Score = 55.1 bits (131), Expect = 2e-07
Identities = 53/237 (22%), Positives = 89/237 (37%), Gaps = 23/237 (9%)
Query: 81 TLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTG------LKKSAIPLLSQWVLSS 134
TL H I +KW IIWD TG SA L W +
Sbjct: 446 TLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQ 505
Query: 135 AISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTA-S 193
A AS D V R+ + I+ FKGHT ++A ++ + +L + S
Sbjct: 506 AF-------ASCSTDQRIHVCRLGVNEPIKT-----FKGHTNEVNAIKWCPQGQLLASCS 553
Query: 194 GDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHN----FITGGSDGYAYLWD 249
DMT +W + + + + H ++ T+ P G N + D LWD
Sbjct: 554 DDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWD 613
Query: 250 VRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDG 306
V + + + V ++ F +G+ +GS D ++ ++ + +Y + G
Sbjct: 614 VERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKGTGG 670
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 54.7 bits (130), Expect = 3e-07
Identities = 35/159 (22%), Positives = 64/159 (40%), Gaps = 11/159 (6%)
Query: 135 AISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERT-ILTAS 193
A P G+ A+A D ++ ++ +F GH + F +LT S
Sbjct: 428 AFGPFGHYFATASHDQTAQLWSCDHIYPLR-----VFAGHLSDVDCVTFHPNSAYVLTGS 482
Query: 194 GDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQP 253
D TC +WD+ + V F H V + + P GH + S+G +LWD+
Sbjct: 483 SDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPD-----GHTMASADSEGLIHLWDIGTG 537
Query: 254 NSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDL 292
++ ++ ++ F ++G D + R +D+
Sbjct: 538 RRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576
Score = 52.0 bits (123), Expect = 2e-06
Identities = 37/175 (21%), Positives = 68/175 (38%), Gaps = 14/175 (8%)
Query: 137 SPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISI--------FKGHTCYISATEFL-DER 187
SP ++A +++ ++ + D + S+ H+ + T F D +
Sbjct: 333 SPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNK 392
Query: 188 TILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYL 247
+L+ S D + +W + + + H G V + P +GH F T D A L
Sbjct: 393 YLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGP-----FGHYFATASHDQTAQL 447
Query: 248 WDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYS 302
W + F SDV + F N + GS D + RL+D+ + ++
Sbjct: 448 WSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFN 502
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 54.7 bits (130), Expect = 3e-07
Identities = 44/219 (20%), Positives = 87/219 (39%), Gaps = 14/219 (6%)
Query: 78 PVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSA-IPLLSQWVLSSAI 136
P+ L GH ++ K+ I++W+ + A + S V+
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 117
Query: 137 SPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISAT--EFLDERTILTASG 194
+ G+++ SA D +V+ R+++ KGHT ++++ + + T S
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKR-----LKGHTSFVNSCYPARRGPQLVCTGSD 172
Query: 195 DMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPN 254
D T +WDI K + F + T + I+GG D +WD+RQ
Sbjct: 173 DGTVKLWDIRKKAAIQTFQN------TYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNK 226
Query: 255 SAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLR 293
+ V+ + + G ++ + D + R++D+R
Sbjct: 227 LTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
>YBR198c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 798
Score = 53.9 bits (128), Expect = 5e-07
Identities = 59/279 (21%), Positives = 105/279 (37%), Gaps = 19/279 (6%)
Query: 20 YHYPNMN---SAGTVEDKIRTAKTECKQLYDQINRIKGKIQDTQLMNLSHGVNSLHELNL 76
Y + N N S D R A + Y +I + G + L N + +N+ +
Sbjct: 460 YTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDG----SSLNNPNIALNNNDKDED 515
Query: 77 QPVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAI 136
+TL GH+ + + + +W T + + V +
Sbjct: 516 PTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSF 575
Query: 137 SPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERT-ILTASGD 195
SP G+ A+A D ++ ++ IF GH + F + T S D
Sbjct: 576 SPLGHYFATASHDQTARLWSCDHIYPLR-----IFAGHLNDVDCVSFHPNGCYVFTGSSD 630
Query: 196 MTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDV-RQPN 254
TC MWD+ V F+ H V+++ + P GR+ TG DG +WD+
Sbjct: 631 KTCRMWDVSTGDSVRLFLGHTAPVISIAVCP--DGRW---LSTGSEDGIINVWDIGTGKR 685
Query: 255 SAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLR 293
Q + + ++ + G ++G D + R++DL+
Sbjct: 686 LKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLK 724
>Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 577
Score = 53.5 bits (127), Expect = 6e-07
Identities = 50/231 (21%), Positives = 86/231 (36%), Gaps = 11/231 (4%)
Query: 81 TLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSG 140
TL H I +KW IIWD TG K P S L +
Sbjct: 324 TLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NN 382
Query: 141 NLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTA-SGDMTCA 199
AS D V R+ D ++ F+GHT ++A ++ +L + S DMT
Sbjct: 383 TTFASCSTDMCIHVCRLGCDRPVKT-----FQGHTNEVNAIKWDPSGMLLASCSDDMTLK 437
Query: 200 MWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHN----FITGGSDGYAYLWDVRQPNS 255
+W + + + + H ++ T+ P N + D LWD+ +
Sbjct: 438 IWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVC 497
Query: 256 AQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFSDG 306
+ V ++ F +G+ +GS D +++ +S + +Y + G
Sbjct: 498 THTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGG 548
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 53.1 bits (126), Expect = 8e-07
Identities = 49/232 (21%), Positives = 92/232 (39%), Gaps = 23/232 (9%)
Query: 80 RTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKK-SAIPLLSQWVLSSAISP 138
RTLKGH + + D+ + I +WD F G + + V S AI P
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 139 SGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTA-SGDMT 197
+G+ + SA D ++ V + F GH ++ + T++ + S D T
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGY-----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 198 CAMWDIPKSKRVTEFIDHLGDVLTMDLPPANT---------------GRYGHNFITGGSD 242
+W + + E +H V + P ++ G+ G ++G D
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 317
Query: 243 GYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRS 294
+WDV + D+ V + F + G+ ++ +DD + R++D ++
Sbjct: 318 KTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369
Score = 52.4 bits (124), Expect = 1e-06
Identities = 25/67 (37%), Positives = 39/67 (57%)
Query: 365 VISIDFSSSGRLMYACYADYGCAVWDIIKGEMIGKVDGHRNRINAVKTSPDGMAVVSSSW 424
V I F SG+L+ +C AD +WD E I + GH + +++V P+G +VS+S
Sbjct: 153 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Query: 425 DMTLKVW 431
D T+K+W
Sbjct: 213 DKTIKMW 219
>Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 315
Score = 52.8 bits (125), Expect = 1e-06
Identities = 41/165 (24%), Positives = 68/165 (40%), Gaps = 15/165 (9%)
Query: 140 GNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYI-SATEFLDERTILTASGDMTC 198
GN + G D ++ N ++ ++ + GH + A D ++ + GD
Sbjct: 37 GNYCLTCGSDKTLKLW-----NPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAV 91
Query: 199 AMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDV--RQPNSA 256
+WD+ + V +F H G V T+ T ++G D WD R+P
Sbjct: 92 VLWDVASGQVVRKFRGHAGKVNTVQFNEEAT-----VILSGSIDSSIRCWDCRSRRPEPV 146
Query: 257 QSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTY 301
Q+ + VS++K + +AGS DG R +DLR S Y
Sbjct: 147 QTLDEARDGVSSVKV--SDHEILAGSVDGRVRRYDLRMGQLFSDY 189
>At4g29830 [R] KOG4155 FOG: WD40 repeat
Length = 321
Score = 52.8 bits (125), Expect = 1e-06
Identities = 46/178 (25%), Positives = 74/178 (40%), Gaps = 17/178 (9%)
Query: 129 QWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF--LDE 186
++VLS A SP+G +A +D V+ V R + Q +GH + + F +D
Sbjct: 159 KFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQ-----LEGHNMPVRSLVFSPVDP 213
Query: 187 RTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAY 246
R + + S D M D + H VL++D P G TG SD
Sbjct: 214 RVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPD-----GGAIATGSSDRTVR 268
Query: 247 LWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYSFS 304
LWD++ + Q+ + V ++ F G G+ + RL + D +S Y +S
Sbjct: 269 LWDLKMRAAIQTMSNHNDQVWSVAFRPPG-----GTGVRAGRLASVSDDKSVSLYDYS 321
>SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein
Length = 314
Score = 52.4 bits (124), Expect = 1e-06
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 16/175 (9%)
Query: 128 SQWVLSSAISPSG-NLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF-LD 185
S WV S + +P +++ S D ++ + RD+ GH+ ++S D
Sbjct: 15 SGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFD 74
Query: 186 ERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYA 245
L+AS D T +WD+ K + +F+ H DVL++ + P N ++G D
Sbjct: 75 SHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDN-----RQVVSGSRDKTI 129
Query: 246 YLWDVRQPNSAQSFFISDSD----VSAIKFFNNGE--SFMAGSDDGSARLFDLRS 294
+W++ + I+D VS ++F N + +F++ D + +++DL +
Sbjct: 130 KIWNI---IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLET 181
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 52.4 bits (124), Expect = 1e-06
Identities = 46/238 (19%), Positives = 89/238 (37%), Gaps = 12/238 (5%)
Query: 67 GVNSLHELNLQPVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPL 126
G ++ N + + TL+GH IS K+ + IW+ + + +
Sbjct: 68 GASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTG 127
Query: 127 LSQWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDE 186
V A S V SA D ++ + + + KGH Y+ F +
Sbjct: 128 HKLGVNDIAWSSDSRCVVSASDDKTLKIFEI-----VTSRMTKTLKGHNNYVFCCNFNPQ 182
Query: 187 RT-ILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYA 245
+ +++ S D + +WD+ + H V + R G +G DG
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSF-----NRDGSLIASGSYDGLV 237
Query: 246 YLWDVRQPNSAQSFFISDS-DVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYS 302
+WD ++ ++ V+ +KF NG+ +A + D + +L+D + Y+
Sbjct: 238 RIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT 295
>SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 314
Score = 52.0 bits (123), Expect = 2e-06
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 110 IIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVIS 169
I W+ +G+ I V ISP +A+AG + H +Y + N Q +
Sbjct: 22 IRFWEALSGICSRTIQHADSQVNRLCISPDKKFLAAAG-NPHVRLYDI---NTSSQMPLM 77
Query: 170 IFKGHTCYISATEF-LDERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPAN 228
F+GHT ++A F D + + T+S D T +WD+ ++ V DH V + + P N
Sbjct: 78 TFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDM-RAPSVQRNYDHKSPVNDLLIHP-N 135
Query: 229 TGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDV--SAIKFFNNGESFMAGSDDGS 286
G ++ G WD+ + NS I + DV S+I ++G +AG++ G+
Sbjct: 136 QG----ELLSCDQSGRVRAWDLGE-NSCTHELIPEEDVPMSSITVGSDGSMLIAGNNKGN 190
>SPBC1A4.07c [A] KOG0268 Sof1-like rRNA processing protein (contains WD40
repeats)
Length = 436
Score = 52.0 bits (123), Expect = 2e-06
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 141 NLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDMTCAM 200
+++ASAG+D +Y + + + + + + + F + S D M
Sbjct: 201 SVLASAGMDRSIVIYDLRTSSPLTKLITKLRTNSISWNPMEAF----NFVAGSEDHNLYM 256
Query: 201 WDIPKSKRVTE-FIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSF 259
+D+ KR + DH+ V+++D P G F++G D +++VR+ +S +
Sbjct: 257 YDMRNLKRALHVYKDHVSAVMSVDFSPT-----GQEFVSGSYDKTIRIYNVREGHSRDVY 311
Query: 260 FISDSD-VSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYS 302
V+A+KF + + +GSDD + RL+ R+ + S S
Sbjct: 312 HTKRMQRVTAVKFSMDAQYIFSGSDDSNVRLWRARASSRASIRS 355
>CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 585
Score = 52.0 bits (123), Expect = 2e-06
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Query: 79 VRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWV-LSSAIS 137
+RTL GHNN++ + + I +WD + + LL L+S +
Sbjct: 409 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQ 468
Query: 138 PSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDMT 197
GN++ S D+H V+ + + + + GH I++ ++ + T+S D T
Sbjct: 469 LRGNILVSCNADSHVRVWDIH-----EGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGT 523
Query: 198 CAMWDIPKSKRVTEFI 213
+WDI + + + +
Sbjct: 524 VKLWDIERGALIRDLV 539
>CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 587
Score = 52.0 bits (123), Expect = 2e-06
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Query: 79 VRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWV-LSSAIS 137
+RTL GHNN++ + + I +WD + + LL L+S +
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQ 470
Query: 138 PSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDMT 197
GN++ S D+H V+ + + + + GH I++ ++ + T+S D T
Sbjct: 471 LRGNILVSCNADSHVRVWDIH-----EGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGT 525
Query: 198 CAMWDIPKSKRVTEFI 213
+WDI + + + +
Sbjct: 526 VKLWDIERGALIRDLV 541
>At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 613
Score = 51.6 bits (122), Expect = 2e-06
Identities = 49/233 (21%), Positives = 94/233 (40%), Gaps = 30/233 (12%)
Query: 79 VRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWD--------PFTGLKKSAIPLL--- 127
VR L+GH +++ W IW TG +A+ L
Sbjct: 258 VRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAK 317
Query: 128 ------SQWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISAT 181
S+ V + + G L+A+ D ++ ++ + +IS H I +
Sbjct: 318 GKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGE------LISTLSKHKGPIFSL 371
Query: 182 EFLDERT-ILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGG 240
++ + +LT S D T +WD+ + +F H G L +D R +F T
Sbjct: 372 KWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVD------WRNNVSFATSS 425
Query: 241 SDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDLR 293
+D YL + + A++F +V+ +K+ G + SDD +A++++++
Sbjct: 426 TDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIK 478
>Hs22047819 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 880
Score = 51.2 bits (121), Expect = 3e-06
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 10/143 (6%)
Query: 168 ISIFKGHTCYISATEFLDERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTM----- 222
+ +++GHT ++ + + ++S D T +W + K + EF H VLT+
Sbjct: 281 LQVYRGHTSIVNRI-LVANNQLFSSSYDRTARVWSVDKGQMSREFRGHRNCVLTLAYSAP 339
Query: 223 -DLPP---ANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESF 278
DLP A G +TG +DG A +W V Q+ V + G +
Sbjct: 340 WDLPSTPCAEEAAAGGLLVTGSTDGTAKVWQVASGCCHQTLRGHTGAVLCLVLDTPGHTA 399
Query: 279 MAGSDDGSARLFDLRSDCQISTY 301
GS D + R +D+ S Q+ +
Sbjct: 400 FTGSTDATIRAWDILSGEQLRVF 422
>At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 51.2 bits (121), Expect = 3e-06
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 12/141 (8%)
Query: 110 IIIWDPFTGLK-KSAIPLLSQWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVI 168
+ +W+P + K + Q V SP G +ASA D ++ N I +
Sbjct: 341 MFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLW-----NGITGQFV 395
Query: 169 SIFKGHTCYISATEF-LDERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPA 227
++F+GH + + D R +L+ S D T +W+I K + H +V +D P
Sbjct: 396 TVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPD 455
Query: 228 NTGRYGHNFITGGSDGYAYLW 248
G ++GG D LW
Sbjct: 456 -----GEKVVSGGKDRVLKLW 471
>At4g21130 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)
Length = 537
Score = 51.2 bits (121), Expect = 3e-06
Identities = 54/259 (20%), Positives = 102/259 (38%), Gaps = 41/259 (15%)
Query: 69 NSLHELNLQP---VRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTG------- 118
N+L +LQ R + H + ++ V G I+ WD +G
Sbjct: 125 NALRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKSDEYKW 184
Query: 119 -----LKKSAIPLLSQWV-------LSSAISPSGNLVASAGLDNHCSVYRVS-------- 158
LK + W L+ A+S G +A+ G+D H ++ +
Sbjct: 185 PSDEVLKSHGLKFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQVN 244
Query: 159 --RDNRIQQNVISIFKGHTCYISATEFLDERT-ILTASGDMTCAMWDIPKSKRVTEFIDH 215
++N+++ +V F GH +S+ F + + + S D T ++W+ + H
Sbjct: 245 KLKNNQVKDSVHCAFTGHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGH 304
Query: 216 LGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVR--QPNSAQSFFISDSDVSAIKFFN 273
++L++D GR ++ G D L+ V P S + + + F
Sbjct: 305 QSELLSIDA----LGR--ERVLSVGRDRTMQLYKVGIVVPESTRLIYRASESNFECCCFV 358
Query: 274 NGESFMAGSDDGSARLFDL 292
N + F++GSD+GS L+ +
Sbjct: 359 NSDEFLSGSDNGSIALWSI 377
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 50.8 bits (120), Expect = 4e-06
Identities = 47/226 (20%), Positives = 86/226 (37%), Gaps = 11/226 (4%)
Query: 79 VRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISP 138
++TL+GH IS VK+ +I+W S + A S
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 139 SGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEF-LDERTILTASGDMT 197
+ SA D ++ D R + + +GHT ++ F I++ S D T
Sbjct: 96 DSHYTCSASDDCTLRIW----DARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDET 151
Query: 198 CAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQ 257
+W++ K V H +M + + R G ++ DG +WD ++ +
Sbjct: 152 IRIWEVKTGKCVRMIKAH-----SMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLK 206
Query: 258 SFFISDSD-VSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYS 302
+ S VS KF NG+ + + D + +L + + + Y+
Sbjct: 207 TLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYT 252
>At1g48870 [S] KOG0283 WD40 repeat-containing protein
Length = 593
Score = 50.8 bits (120), Expect = 4e-06
Identities = 50/214 (23%), Positives = 83/214 (38%), Gaps = 21/214 (9%)
Query: 79 VRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISP 138
V+ + GH KI +K+ G + IW LS +L+S +
Sbjct: 191 VQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWR----------ITLSDSLLASFLRQ 240
Query: 139 SGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTASGDMTC 198
+ A L V + I++ GHT + + D +L+AS D T
Sbjct: 241 QEPINQQAAL-----VLFPQKAFHIEETPFQELYGHTGDVLDLAWSDSNLLLSASKDKTV 295
Query: 199 AMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQS 258
+W + + F H V ++ P N +NF +G DG A +W + +
Sbjct: 296 RLWRTGCDQCLHVF-HHNNYVTCVEFNPVNK----NNFASGSIDGKARIWGLSEERVVAW 350
Query: 259 FFISDSDVSAIKFFNNGESFMAGSDDGSARLFDL 292
+ DS +SAI + NG F+ G G+ R + +
Sbjct: 351 TDVRDS-ISAISYQPNGNGFVVGCITGNCRFYQI 383
>CE06574 [R] KOG0266 WD40 repeat-containing protein
Length = 501
Score = 50.1 bits (118), Expect = 7e-06
Identities = 45/226 (19%), Positives = 90/226 (38%), Gaps = 12/226 (5%)
Query: 79 VRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAISP 138
V+T+ GH +S +K+ I +W+ + + + S
Sbjct: 206 VKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFSWSS 265
Query: 139 SGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFLDERTILTASG-DMT 197
+ +ASA D ++ V I + +GHT Y+ F + +++ ++G D T
Sbjct: 266 NSQFIASASDDTTVKIFDV-----ISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDET 320
Query: 198 CAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQ 257
+WD K+ + I D +T + G+ T DG +WD + +
Sbjct: 321 VRVWDF-KTGLCVKCIPAHSDPIT----SISYNHDGNTMATSSYDGCIRVWDAASGSCLK 375
Query: 258 SFFISD-SDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQISTYS 302
+ +D + V+ + F NG+ ++ D S +L+D + + Y+
Sbjct: 376 TLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLKYYN 421
>At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 876
Score = 50.1 bits (118), Expect = 7e-06
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 11/178 (6%)
Query: 114 DPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKG 173
+P +S + + + S A++ + +LV + D S++R+ +V+++ KG
Sbjct: 485 EPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPD----LVHVVTL-KG 539
Query: 174 HTCYISATEFLD-ERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRY 232
H I + EF ++ ++TASGD T +W I + F H VL A+
Sbjct: 540 HKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLR-----ASFITD 594
Query: 233 GHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLF 290
G F++ G+DG LW+V ++ + V A+ E G D L+
Sbjct: 595 GTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
>7291072 [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 362
Score = 50.1 bits (118), Expect = 7e-06
Identities = 38/167 (22%), Positives = 73/167 (42%), Gaps = 8/167 (4%)
Query: 108 GFIIIWDPFTGLKKSAIPLLSQWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNV 167
G + +WD + + +P + + AISP G +A+A +C ++ ++ ++ +
Sbjct: 145 GSVFLWDVKSERHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSQDQKMSTL 204
Query: 168 ISIFK--GHTCYISATEFL-DERTILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDL 224
K H+ YI +F D R +LT SGD T +W + E + + D
Sbjct: 205 RPNRKIPAHSRYILRCKFSPDSRLLLTTSGDGTVCIWKTDDFSKWRELC--IENYWVWDA 262
Query: 225 PPANTGRYGHNFITGGSDGYAYLWDVRQPNSAQSFFISDSDVSAIKF 271
+ ++ T SDG A LW ++ +S + + ++A+ F
Sbjct: 263 AFSADSKW---LFTASSDGIARLWKLQTKSSIRDYTGHTKAITALSF 306
>YMR116c [T] KOG0279 G protein beta subunit-like protein
Length = 319
Score = 49.7 bits (117), Expect = 9e-06
Identities = 44/222 (19%), Positives = 82/222 (36%), Gaps = 20/222 (9%)
Query: 78 PVRTLKGHNNKISDVKWXXXXXXXXXXXXXGFIIIWDPFTGLKKSAIPLLSQWVLSSAIS 137
PVR+ KGH++ + D + +WD TG V+S I
Sbjct: 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDID 116
Query: 138 PSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFL-------DERTIL 190
+++ S D V+ I+ ++ GH ++S + D TI+
Sbjct: 117 KKASMIISGSRDKTIKVWT------IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTII 170
Query: 191 TASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYLWDV 250
+A D W++ + + +FI H ++ T+ P T + G DG LW++
Sbjct: 171 SAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGT-----LIASAGKDGEIMLWNL 225
Query: 251 RQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLFDL 292
+ + D S F+ ++A + ++F L
Sbjct: 226 AAKKAMYTLSAQDEVFSLA--FSPNRYWLAAATATGIKVFSL 265
>At3g16650 [A] KOG0285 Pleiotropic regulator 1
Length = 477
Score = 49.7 bits (117), Expect = 9e-06
Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 130 WVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISI-FKGHTCYISATEFLDERT 188
WV S A PS + D ++ V+ V+ + GH + + T
Sbjct: 170 WVRSVAFDPSNEWFCTGSADRTIKIWDVAT------GVLKLTLTGHIGQVRGLAVSNRHT 223
Query: 189 ILTASGD-MTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYL 247
+ ++GD WD+ ++K + + HL V + L P +TGG D +
Sbjct: 224 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTL-----DVVLTGGRDSVCRV 278
Query: 248 WDVRQPNSAQSFFI-SDSDVSAIKFFNNGESFMAGSDDGSARLFDLRSDCQIST 300
WD+R Q F + DSDV ++ + GS D + + +DLR ++T
Sbjct: 279 WDIR--TKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMAT 330
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 49.7 bits (117), Expect = 9e-06
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 11/163 (6%)
Query: 129 QWVLSSAISPSGNLVASAGLDNHCSVYRVSRDNRIQQNVISIFKGHTCYISATEFL-DER 187
++ LS A SP G +AS +D +++ V+ V+ +GH + + F + +
Sbjct: 171 KYTLSIAYSPDGKYIASGAIDGIITIFDVAAGK-----VVQTLEGHAMPVRSLCFSPNSQ 225
Query: 188 TILTASGDMTCAMWDIPKSKRVTEFIDHLGDVLTMDLPPANTGRYGHNFITGGSDGYAYL 247
+LTAS D ++D+ S V H VL + G +F + SD +
Sbjct: 226 LLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAF-----SEDGKHFASSSSDNSVKI 280
Query: 248 WDVRQPNSAQSFFISDSDVSAIKFFNNGESFMAGSDDGSARLF 290
WD + +F V +++ + + S+D S ++
Sbjct: 281 WDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,520,474
Number of Sequences: 60738
Number of extensions: 947080
Number of successful extensions: 6322
Number of sequences better than 1.0e-05: 78
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 5681
Number of HSP's gapped (non-prelim): 597
length of query: 436
length of database: 30,389,216
effective HSP length: 109
effective length of query: 327
effective length of database: 23,768,774
effective search space: 7772389098
effective search space used: 7772389098
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)