ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV1765   suspect: LH   S     KOG3945  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV1765 610569 609916 -218 
         (218 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CE04947_2 [S] KOG3945 Uncharacterized conserved protein                55   1e-07

>CE04947_2 [S] KOG3945 Uncharacterized conserved protein
          Length = 167

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 34/155 (21%), Positives = 68/155 (42%), Gaps = 19/155 (12%)

Query: 50  TAHRYVAYTSDIGESFRPVFPQAVVKLGYGISWLYILGDVSYITYRAKLKQEGYQLPSGW 109
           T  RY+ Y +++GE+FR +    VVK  Y +++ Y+  D                +  G 
Sbjct: 17  TPLRYLGYANEVGEAFRSLVKPVVVKFSYVVAFGYVAAD---------------SIDKGL 61

Query: 110 KPWDELSENNKVLKSNVSPDWKMVGLERLIFQSVASMGLPAFTIHSLVKYSGNWFNKQYP 169
           + + +    +      V+    +  ++ +++Q+ AS+ +P FTI+    +S     K   
Sbjct: 62  QEYIKTHSTSTEKTKKVA----IAAVDTVLWQTFASVLIPGFTINRFCFFSNLLLQKSTK 117

Query: 170 KNAMLRTWGPISIGLAVVPMLPYAFDKPIEHFLSK 204
               +R W    +GLA +P + +  D  +E  + K
Sbjct: 118 LPTNMRKWTVTCLGLATIPFIVHPIDSFVEEAMDK 152


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.319    0.136    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,738,871
Number of Sequences: 60738
Number of extensions: 566526
Number of successful extensions: 1227
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1226
Number of HSP's gapped (non-prelim): 1
length of query: 218
length of database: 30,389,216
effective HSP length: 102
effective length of query: 116
effective length of database: 24,193,940
effective search space: 2806497040
effective search space used: 2806497040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)