ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV1834.1 good J KOG0887 Translation, ribosomal structure and biogenesis 60S ribosomal protein L35A/L37
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV1834.1 633368 633066 -101
(101 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL143w [J] KOG0887 60S ribosomal protein L35A/L37 188 9e-49
YOR234c [J] KOG0887 60S ribosomal protein L35A/L37 187 3e-48
SPCP31B10.08c [J] KOG0887 60S ribosomal protein L35A/L37 146 5e-36
At3g55750 [J] KOG0887 60S ribosomal protein L35A/L37 124 2e-29
At1g74270 [J] KOG0887 60S ribosomal protein L35A/L37 124 2e-29
At1g41880 [J] KOG0887 60S ribosomal protein L35A/L37 124 3e-29
At1g07070 [J] KOG0887 60S ribosomal protein L35A/L37 124 3e-29
SPBC1921.01c [J] KOG0887 60S ribosomal protein L35A/L37 117 3e-27
Hs16117791 [J] KOG0887 60S ribosomal protein L35A/L37 100 3e-22
CE04362 [J] KOG0887 60S ribosomal protein L35A/L37 98 2e-21
7296748 [J] KOG0887 60S ribosomal protein L35A/L37 89 1e-18
Hs22044780 [J] KOG0887 60S ribosomal protein L35A/L37 81 3e-16
Hs17475088 [J] KOG0887 60S ribosomal protein L35A/L37 78 2e-15
Hs18555601 [J] KOG0887 60S ribosomal protein L35A/L37 61 3e-10
Hs22057572 [J] KOG0887 60S ribosomal protein L35A/L37 55 2e-08
ECU02g0900 [J] KOG0887 60S ribosomal protein L35A/L37 53 6e-08
YER098w [O] KOG1864 Ubiquitin-specific protease 28 1.6
7293009 [R] KOG1238 Glucose dehydrogenase/choline dehydrogenase/... 28 2.1
YKL025c [A] KOG3741 Poly(A) ribonuclease subunit 28 2.8
CE04736 [G] KOG3731 Sulfatases 28 2.8
CE10332_1 [R] KOG0504 FOG: Ankyrin repeat 28 2.8
At4g35630 [HE] KOG2790 Phosphoserine aminotransferase 27 3.6
At1g55120 [G] KOG0228 Beta-fructofuranosidase (invertase) 27 3.6
SPAC2F7.11 [R] KOG0118 FOG: RRM domain 27 4.8
At4g11860 [S] KOG2427 Uncharacterized conserved protein 27 4.8
CE18529_1 [O] KOG0171 Mitochondrial inner membrane protease subu... 27 4.8
At2g42450 [IOT] KOG2088 Predicted lipase/calmodulin-binding heat... 27 6.2
>YPL143w [J] KOG0887 60S ribosomal protein L35A/L37
Length = 107
Score = 188 bits (478), Expect = 9e-49
Identities = 89/101 (88%), Positives = 97/101 (95%)
Query: 1 MYVKGKHLSYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIRV 60
+YVKGKHLSYQRSK VNNPNVSL+KIEGVA P+DA+FYLGKR+AYVYR SKEVRGSKIRV
Sbjct: 7 LYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDAQFYLGKRIAYVYRASKEVRGSKIRV 66
Query: 61 IWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 101
+WGK+ RTHGNSGVVRATFR+NLPAKTFGASVRIFLYPSNI
Sbjct: 67 MWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
>YOR234c [J] KOG0887 60S ribosomal protein L35A/L37
Length = 107
Score = 187 bits (474), Expect = 3e-48
Identities = 88/101 (87%), Positives = 97/101 (95%)
Query: 1 MYVKGKHLSYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIRV 60
+YVKGKHLSYQRSK VNNPNVSL+KIEGVA P++A+FYLGKR+AYVYR SKEVRGSKIRV
Sbjct: 7 LYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGSKIRV 66
Query: 61 IWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 101
+WGK+ RTHGNSGVVRATFR+NLPAKTFGASVRIFLYPSNI
Sbjct: 67 MWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
>SPCP31B10.08c [J] KOG0887 60S ribosomal protein L35A/L37
Length = 108
Score = 146 bits (368), Expect = 5e-36
Identities = 71/101 (70%), Positives = 82/101 (80%)
Query: 1 MYVKGKHLSYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIRV 60
+YVK KHLS+QRSK V +P S+VKIEG + E+A+FYLGKRV YVY+ SK VRGSKIRV
Sbjct: 8 LYVKAKHLSFQRSKHVIHPGTSIVKIEGCDSKEEAQFYLGKRVCYVYKSSKAVRGSKIRV 67
Query: 61 IWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 101
IWG I R HGNSG VRA F NLPAKTFG+S+R+ LYPSNI
Sbjct: 68 IWGTIARPHGNSGAVRARFVHNLPAKTFGSSLRVMLYPSNI 108
>At3g55750 [J] KOG0887 60S ribosomal protein L35A/L37
Length = 111
Score = 124 bits (311), Expect = 2e-29
Identities = 58/101 (57%), Positives = 73/101 (71%)
Query: 1 MYVKGKHLSYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIRV 60
+YV+G L Y+RSKS PN SLV+IEGV E+ +Y GKR+AY+Y+ + GS R
Sbjct: 11 LYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRC 70
Query: 61 IWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 101
IWGK+ R HGNSGVVR+ F SNLP K+ GA VR+F+YPSNI
Sbjct: 71 IWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
>At1g74270 [J] KOG0887 60S ribosomal protein L35A/L37
Length = 112
Score = 124 bits (311), Expect = 2e-29
Identities = 58/101 (57%), Positives = 73/101 (71%)
Query: 1 MYVKGKHLSYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIRV 60
+YV+G L Y+RSKS PN SLV+IEGV E+ +Y GKR+AY+Y+ + GS R
Sbjct: 12 LYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNGSHYRC 71
Query: 61 IWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 101
IWGK+ R HGNSGVVRA F SNLP K+ G+ VR+F+YPSNI
Sbjct: 72 IWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
>At1g41880 [J] KOG0887 60S ribosomal protein L35A/L37
Length = 111
Score = 124 bits (310), Expect = 3e-29
Identities = 57/101 (56%), Positives = 73/101 (71%)
Query: 1 MYVKGKHLSYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIRV 60
+YV+G L Y+RSKS PN SL++IEGV E+ +Y GKR+AY+Y+ + GS R
Sbjct: 11 LYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRC 70
Query: 61 IWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 101
IWGK+ R HGNSGVVR+ F SNLP K+ GA VR+F+YPSNI
Sbjct: 71 IWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
>At1g07070 [J] KOG0887 60S ribosomal protein L35A/L37
Length = 112
Score = 124 bits (310), Expect = 3e-29
Identities = 57/101 (56%), Positives = 73/101 (71%)
Query: 1 MYVKGKHLSYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIRV 60
+YV+G L Y+RSKS PN SLV++EGV E+ +Y GKR+AY+Y+ + GS R
Sbjct: 12 LYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNGSHYRC 71
Query: 61 IWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 101
IWGK+ R HGNSGVVRA F SNLP K+ G+ VR+F+YPSNI
Sbjct: 72 IWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
>SPBC1921.01c [J] KOG0887 60S ribosomal protein L35A/L37
Length = 79
Score = 117 bits (292), Expect = 3e-27
Identities = 53/79 (67%), Positives = 66/79 (83%)
Query: 23 LVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIRVIWGKINRTHGNSGVVRATFRSN 82
+VKIEG + E+A+FYLGKR+ +VY+ +K VRGSKIRVIWG ++R HGNSGVVRA F N
Sbjct: 1 MVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGSKIRVIWGTVSRPHGNSGVVRARFTHN 60
Query: 83 LPAKTFGASVRIFLYPSNI 101
LP KTFGAS+R+ LYPSN+
Sbjct: 61 LPPKTFGASLRVMLYPSNV 79
>Hs16117791 [J] KOG0887 60S ribosomal protein L35A/L37
Length = 110
Score = 100 bits (250), Expect = 3e-22
Identities = 50/106 (47%), Positives = 66/106 (62%), Gaps = 5/106 (4%)
Query: 1 MYVKGKHLSYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEV-----RG 55
++ K Y+R + +L+KIEGV ++ +FYLGKR AYVY+ +
Sbjct: 5 LWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGKP 64
Query: 56 SKIRVIWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 101
+K RVIWGK+ R HGNSG+VRA FRSNLPAK G +R+ LYPS I
Sbjct: 65 NKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>CE04362 [J] KOG0887 60S ribosomal protein L35A/L37
Length = 124
Score = 98.2 bits (243), Expect = 2e-21
Identities = 47/107 (43%), Positives = 63/107 (57%), Gaps = 6/107 (5%)
Query: 1 MYVKGKHLSYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVR------ 54
+YVK ++R + + SL+K+EGV N EDA FY GKRV Y+Y+ +
Sbjct: 18 LYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYKAHNKTLKTGHTV 77
Query: 55 GSKIRVIWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 101
++ R IWGKI R HGN+G VRA F N+P G +R+ LYPSNI
Sbjct: 78 ATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSNI 124
>7296748 [J] KOG0887 60S ribosomal protein L35A/L37
Length = 157
Score = 89.0 bits (219), Expect = 1e-18
Identities = 42/108 (38%), Positives = 59/108 (53%), Gaps = 7/108 (6%)
Query: 1 MYVKGKHLSYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEV------- 53
++ K Y+R + N +++KIEG E FY+GKR YVY+ +
Sbjct: 50 LFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPE 109
Query: 54 RGSKIRVIWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 101
R +++R +WGK+ R HGN+G VRA F NLP G +RI LYPS I
Sbjct: 110 RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157
>Hs22044780 [J] KOG0887 60S ribosomal protein L35A/L37
Length = 143
Score = 80.9 bits (198), Expect = 3e-16
Identities = 41/96 (42%), Positives = 57/96 (58%), Gaps = 5/96 (5%)
Query: 11 QRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEV-----RGSKIRVIWGKI 65
Q+++ + V EGV + ++A+FYL KR YVY+ + +K RVIWGK+
Sbjct: 48 QKTEDFGRGMLITVSQEGVYSRDEAEFYLSKRCVYVYKAKNNTVTPDGKPNKTRVIWGKV 107
Query: 66 NRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 101
HGNSG+V A F+SNL AK G VR+ L+PS I
Sbjct: 108 TLAHGNSGMVHAKFQSNLTAKAIGHRVRVMLHPSRI 143
>Hs17475088 [J] KOG0887 60S ribosomal protein L35A/L37
Length = 138
Score = 78.2 bits (191), Expect = 2e-15
Identities = 39/87 (44%), Positives = 56/87 (63%), Gaps = 5/87 (5%)
Query: 20 NVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEV-----RGSKIRVIWGKINRTHGNSGV 74
+ +L+KIE V ++ +F LGKR AY+Y+ + ++ RVIWGK+ +T+GNSGV
Sbjct: 52 HTALLKIEDVYAQDETEFCLGKRSAYLYKAKNNTVTPGGKPNQTRVIWGKVTQTYGNSGV 111
Query: 75 VRATFRSNLPAKTFGASVRIFLYPSNI 101
V A F+S LPAK + + LYPSNI
Sbjct: 112 VCAKFQSKLPAKATRHGIHVMLYPSNI 138
>Hs18555601 [J] KOG0887 60S ribosomal protein L35A/L37
Length = 108
Score = 60.8 bits (146), Expect = 3e-10
Identities = 32/81 (39%), Positives = 47/81 (57%), Gaps = 3/81 (3%)
Query: 20 NVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSK---IRVIWGKINRTHGNSGVVR 76
+ ++++IEGV ++ +FYLG R YV + GSK RVIWGK+ G + VV
Sbjct: 21 HTTVLEIEGVYARDETEFYLGNRCTYVCKEQHSGPGSKSNKTRVIWGKVTCAQGKNSVVC 80
Query: 77 ATFRSNLPAKTFGASVRIFLY 97
A F+S+ PAK G + + LY
Sbjct: 81 AKFQSHPPAKAIGHRIHVMLY 101
>Hs22057572 [J] KOG0887 60S ribosomal protein L35A/L37
Length = 205
Score = 55.1 bits (131), Expect = 2e-08
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 56 SKIRVIWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYPSNI 101
+K +IWGK+ + HGN G+V + F+SN PAK G +R+ LYPS I
Sbjct: 160 NKAIIIWGKVIQAHGNGGMVCSKFQSNPPAKAIGHKIRVMLYPSRI 205
>ECU02g0900 [J] KOG0887 60S ribosomal protein L35A/L37
Length = 113
Score = 53.1 bits (126), Expect = 6e-08
Identities = 32/90 (35%), Positives = 46/90 (50%), Gaps = 4/90 (4%)
Query: 8 LSYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIRVIWGKINR 67
+S++R + +P L+KI V + ++A Y+G V C K+ + + G I R
Sbjct: 21 VSFKRGQRRLHPRHVLLKIRNVTSKDEASSYVGNGVV----CYKKNNEGERYPVHGVITR 76
Query: 68 THGNSGVVRATFRSNLPAKTFGASVRIFLY 97
HGNSG VRA F NL K G V + LY
Sbjct: 77 IHGNSGAVRARFTRNLDPKLLGTHVFVKLY 106
>YER098w [O] KOG1864 Ubiquitin-specific protease
Length = 754
Score = 28.5 bits (62), Expect = 1.6
Identities = 18/43 (41%), Positives = 25/43 (57%), Gaps = 1/43 (2%)
Query: 41 KRVAYVYRCSK-EVRGSKIRVIWGKINRTHGNSGVVRATFRSN 82
+RVA V R K +++GSKIRV + T NSG ++SN
Sbjct: 167 ERVAAVNRIRKSDLKGSKIRVFTNESFETSTNSGNSNTGYQSN 209
>7293009 [R] KOG1238 Glucose dehydrogenase/choline
dehydrogenase/mandelonitrile lyase (GMC oxidoreductase
family)
Length = 621
Score = 28.1 bits (61), Expect = 2.1
Identities = 33/118 (27%), Positives = 50/118 (41%), Gaps = 27/118 (22%)
Query: 1 MYVKGKHLSYQRSKSVNNPNVS-------LVKIEGVANPEDAKFYLGK----RVAYVYRC 49
MY +G Y R +++ NP S K EG + P+ + Y+G+ +V+YV
Sbjct: 152 MYTRGNRRDYDRWEALGNPGWSFKDVLPYFKKYEGSSVPDAEEDYVGRNGPVKVSYVNWR 211
Query: 50 SK---------EVRGSKIRVIWGKINRTHGNSGVVRATFRSNLPAKTFGASVRIFLYP 98
SK + G K R G+I +GV A + T +S R +LYP
Sbjct: 212 SKIAEAFVDAAQQDGLKYRDYNGRI-----QNGV--AFLHTTTRNSTRWSSNRAYLYP 262
>YKL025c [A] KOG3741 Poly(A) ribonuclease subunit
Length = 679
Score = 27.7 bits (60), Expect = 2.8
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 17 NNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIRVIWGKINRTH 69
NN ++ + V + D K Y+ KR+ + + + SKI IW KIN T+
Sbjct: 301 NNDFLNKTTLFKVFSNYDGKAYVLKRLPNIDKSMNPNKISKIYQIWSKINCTN 353
>CE04736 [G] KOG3731 Sulfatases
Length = 709
Score = 27.7 bits (60), Expect = 2.8
Identities = 26/93 (27%), Positives = 37/93 (38%), Gaps = 9/93 (9%)
Query: 1 MYVKGKHLSYQRSKSVNNPNVSLVKIEGVANPEDAKFYL---GKRVAYVYRCSKEVRGSK 57
+YV H+ NN N + V+ V + YL G R AY+ + E GS
Sbjct: 90 LYVHNHHVH------TNNQNCTGVEWRKVHEKKSIGVYLQEAGYRTAYLGKYLNEYDGSY 143
Query: 58 IRVIWGKINRTHGNSGVVRATFRSNLPAKTFGA 90
I W + + NS T SN + FG+
Sbjct: 144 IPPGWDEWHAIVKNSKFYNYTMNSNGEREKFGS 176
>CE10332_1 [R] KOG0504 FOG: Ankyrin repeat
Length = 523
Score = 27.7 bits (60), Expect = 2.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 17 NNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIRVIWGKINRTHGNS 72
NN V+ ++ +A F G + YRC+K+ KIR + I R+ NS
Sbjct: 145 NNQEVAPLRPTALAEAASISFNRGNVLTNSYRCAKK----KIRATFHAIRRSRSNS 196
>At4g35630 [HE] KOG2790 Phosphoserine aminotransferase
Length = 430
Score = 27.3 bits (59), Expect = 3.6
Identities = 15/35 (42%), Positives = 18/35 (50%)
Query: 49 CSKEVRGSKIRVIWGKINRTHGNSGVVRATFRSNL 83
CSK V SK VI+G + G SGV R +L
Sbjct: 247 CSKPVDVSKFGVIYGGAQKNVGPSGVTIVIIRKDL 281
>At1g55120 [G] KOG0228 Beta-fructofuranosidase (invertase)
Length = 591
Score = 27.3 bits (59), Expect = 3.6
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 9 SYQRSKSVNNPNVSLVKIEGVANPEDAKFYLGKRVAYVYRCSKEVRGSKIRVIWGKINRT 68
SY R K V P++ V+ E + K+Y K Y K K R++WG +N +
Sbjct: 277 SYDREKDVYVPDLGFVQNESAPRLDYGKYYASKT---FYDDVK-----KRRILWGWVNES 328
>SPAC2F7.11 [R] KOG0118 FOG: RRM domain
Length = 529
Score = 26.9 bits (58), Expect = 4.8
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
Query: 53 VRGSKIRVIWGKINRTHGN-------SGVVRATFRSNLP 84
+RG++++V WGK + ++ + SG R F NLP
Sbjct: 176 IRGTEVKVGWGKNSASNSSVLLAVQQSGACRNVFLGNLP 214
>At4g11860 [S] KOG2427 Uncharacterized conserved protein
Length = 626
Score = 26.9 bits (58), Expect = 4.8
Identities = 21/68 (30%), Positives = 33/68 (47%), Gaps = 15/68 (22%)
Query: 39 LGKRVAY-VYRCSKEVRGS-------------KIRVIWGKINRTHGNSGVVRATFRS-NL 83
LGKRV V CS E R + + ++W K+N +G++ + ATF+ +
Sbjct: 458 LGKRVEKDVGDCSSEGRATDGLTAEEDQGYLNQPDLVWEKLNEVNGDTAFMTATFKDFTI 517
Query: 84 PAKTFGAS 91
+ T GAS
Sbjct: 518 DSSTGGAS 525
>CE18529_1 [O] KOG0171 Mitochondrial inner membrane protease subunit IMP1
Length = 131
Score = 26.9 bits (58), Expect = 4.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 15 SVNNPNVSLVKIEGVANPEDAKFYLGKRVA 44
S+ N NV + I G NP+ K L KR+A
Sbjct: 25 SIRNKNVQVGDIVGCVNPQKPKELLCKRIA 54
>At2g42450 [IOT] KOG2088 Predicted lipase/calmodulin-binding heat-shock
protein
Length = 508
Score = 26.6 bits (57), Expect = 6.2
Identities = 19/96 (19%), Positives = 38/96 (38%), Gaps = 7/96 (7%)
Query: 3 VKGKHLSYQRSKSVNNPNVSLVKIEGVAN----PEDAKFYLGKRVAYVYRCSKEVRGSKI 58
++G H Y + + + V EG + E A+++L + + RC + G K+
Sbjct: 208 IRGTHTIYDLITDIVSSSDEEVTFEGYSTHFGTAEAARWFLNHELQTIRRCLAKYEGYKL 267
Query: 59 RVIWGKINRTHGNSGVVRATFRSNLPAKTFGASVRI 94
R++ + G + A +P + G I
Sbjct: 268 RLVGHSLG---GAIASLMAIMLKKMPREELGFDAEI 300
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,802,971
Number of Sequences: 60738
Number of extensions: 205493
Number of successful extensions: 393
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 368
Number of HSP's gapped (non-prelim): 27
length of query: 101
length of database: 30,389,216
effective HSP length: 77
effective length of query: 24
effective length of database: 25,712,390
effective search space: 617097360
effective search space used: 617097360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)