ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV1974.1   suspect: Pn  H     KOG2524   Coenzyme transport and metabolism                              Cobyrinic acid a,c-diamide synthase

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV1974.1 671282 671058 -75  
         (75 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC589.05c [H] KOG2524 Cobyrinic acid ac-diamide synthase             28   1.7  
YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rR...    27   5.1  
7300892 [T] KOG3589 G protein signaling regulators                     26   8.6  

>SPAC589.05c [H] KOG2524 Cobyrinic acid ac-diamide synthase
          Length = 346

 Score = 28.5 bits (62), Expect = 1.7
 Identities = 14/39 (35%), Positives = 22/39 (55%), Gaps = 2/39 (5%)

Query: 14 WIFESELLSTAFWSSKRFSATGKHALFGTFSAHVQHQLY 52
          WIF  ++L+ +FWS      +GKH+    FS   + +LY
Sbjct: 63 WIFLVDILNFSFWSDVDVEDSGKHS--KRFSIEYKGKLY 99


>YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
           processing complex
          Length = 923

 Score = 26.9 bits (58), Expect = 5.1
 Identities = 23/79 (29%), Positives = 38/79 (47%), Gaps = 14/79 (17%)

Query: 2   DVATSATTRNVRWIFE-SELLSTAFWS----SKRFSATG----KHALFGTFSAHVQHQLY 52
           D+ +   +++ R+I   S+ LS   WS     K  +AT     +  + G F +H Q ++Y
Sbjct: 148 DITSLTWSQDSRFILTTSKDLSAKIWSVDSEEKNLAATTFNGHRDYVMGAFFSHDQEKIY 207

Query: 53  ETTRITAVFT-----RPSD 66
             ++  AVF      RPSD
Sbjct: 208 TVSKDGAVFVWEFTKRPSD 226


>7300892 [T] KOG3589 G protein signaling regulators
          Length = 1175

 Score = 26.2 bits (56), Expect = 8.6
 Identities = 14/32 (43%), Positives = 19/32 (58%), Gaps = 1/32 (3%)

Query: 44  SAHVQHQLYETTRITAVFTRPSDPTAIATSVA 75
           S+  QHQL    ++  V T P+ P+AI  SVA
Sbjct: 414 SSRSQHQL-SLLQVPKVLTTPAPPSAITASVA 444


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.320    0.124    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,853,371
Number of Sequences: 60738
Number of extensions: 109710
Number of successful extensions: 201
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 200
Number of HSP's gapped (non-prelim): 3
length of query: 75
length of database: 30,389,216
effective HSP length: 51
effective length of query: 24
effective length of database: 27,291,578
effective search space: 654997872
effective search space used: 654997872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)