ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV1975.2 good J KOG3464 Translation, ribosomal structure and biogenesis 60S ribosomal protein L44
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV1975.2 671990 671775 -72
(72 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YNL162w [J] KOG3464 60S ribosomal protein L44 137 3e-33
YHR141c [J] KOG3464 60S ribosomal protein L44 137 3e-33
SPAC15E1.03 [J] KOG3464 60S ribosomal protein L44 128 2e-30
Hs10445223 [J] KOG3464 60S ribosomal protein L44 122 1e-28
CE02131 [J] KOG3464 60S ribosomal protein L44 121 2e-28
Hs4506651 [J] KOG3464 60S ribosomal protein L44 120 3e-28
7297335 [J] KOG3464 60S ribosomal protein L44 117 3e-27
At4g14320 [J] KOG3464 60S ribosomal protein L44 114 3e-26
At3g23390 [J] KOG3464 60S ribosomal protein L44 114 3e-26
Hs22065075 [J] KOG3464 60S ribosomal protein L44 113 5e-26
Hs22065135 [J] KOG3464 60S ribosomal protein L44 107 2e-24
Hs22066131 [J] KOG3464 60S ribosomal protein L44 105 9e-24
Hs22058363 [J] KOG3464 60S ribosomal protein L44 104 2e-23
Hs20555200 [J] KOG3464 60S ribosomal protein L44 91 3e-19
ECU10g1300 [J] KOG3464 60S ribosomal protein L44 90 5e-19
Hs22047108 [J] KOG3464 60S ribosomal protein L44 82 1e-16
Hs17442298 [J] KOG3464 60S ribosomal protein L44 66 1e-11
Hs18573385_2 [J] KOG3464 60S ribosomal protein L44 63 6e-11
Hs18601762 [J] KOG3464 60S ribosomal protein L44 60 5e-10
Hs22066175_1 [J] KOG3464 60S ribosomal protein L44 44 3e-05
CE24741 [T] KOG0789 Protein tyrosine phosphatase 31 0.35
CE17478 [T] KOG0789 Protein tyrosine phosphatase 31 0.35
CE20651 [A] KOG0947 Cytoplasmic exosomal RNA helicase SKI2 DEAD-... 28 2.3
Hs22048689 [J] KOG3464 60S ribosomal protein L44 27 3.9
7298147 [G] KOG2119 Predicted bile acid beta-glucosidase 27 3.9
Hs17482271 [R] KOG1721 FOG: Zn-finger 26 8.7
At3g58750 [C] KOG2617 Citrate synthase 26 8.7
7301603 [T] KOG1217 Fibrillins and related proteins containing C... 26 8.7
>YNL162w [J] KOG3464 60S ribosomal protein L44
Length = 106
Score = 137 bits (345), Expect = 3e-33
Identities = 63/72 (87%), Positives = 68/72 (93%)
Query: 1 MYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKRCKHFELG 60
++AQGKRRYDRKQSGFGGQTK +FHKKAKTTKKVVLRLEC+ CKT+ QL LKRCKHFELG
Sbjct: 35 LFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVKCKTRAQLTLKRCKHFELG 94
Query: 61 GEKKQKGQALQF 72
GEKKQKGQALQF
Sbjct: 95 GEKKQKGQALQF 106
>YHR141c [J] KOG3464 60S ribosomal protein L44
Length = 106
Score = 137 bits (345), Expect = 3e-33
Identities = 63/72 (87%), Positives = 68/72 (93%)
Query: 1 MYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKRCKHFELG 60
++AQGKRRYDRKQSGFGGQTK +FHKKAKTTKKVVLRLEC+ CKT+ QL LKRCKHFELG
Sbjct: 35 LFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVKCKTRAQLTLKRCKHFELG 94
Query: 61 GEKKQKGQALQF 72
GEKKQKGQALQF
Sbjct: 95 GEKKQKGQALQF 106
>SPAC15E1.03 [J] KOG3464 60S ribosomal protein L44
Length = 106
Score = 128 bits (321), Expect = 2e-30
Identities = 60/70 (85%), Positives = 63/70 (89%)
Query: 3 AQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGE 62
AQGKRRYDRKQSGFGGQTK +FHKKAK TKKVVLRLEC+SCK K QL LKRCKHFELGGE
Sbjct: 37 AQGKRRYDRKQSGFGGQTKPVFHKKAKVTKKVVLRLECVSCKYKNQLVLKRCKHFELGGE 96
Query: 63 KKQKGQALQF 72
KK KG A+QF
Sbjct: 97 KKTKGAAIQF 106
>Hs10445223 [J] KOG3464 60S ribosomal protein L44
Length = 106
Score = 122 bits (305), Expect = 1e-28
Identities = 56/74 (75%), Positives = 67/74 (89%), Gaps = 2/74 (2%)
Query: 1 MYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECM--SCKTKTQLALKRCKHFE 58
+YAQGKRRYDRKQSG+GGQTK IF KKAKTTKK+VLRLEC+ +C++K LA+KRCKHFE
Sbjct: 33 LYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFE 92
Query: 59 LGGEKKQKGQALQF 72
LGG+KK+KGQ +QF
Sbjct: 93 LGGDKKRKGQVIQF 106
>CE02131 [J] KOG3464 60S ribosomal protein L44
Length = 105
Score = 121 bits (303), Expect = 2e-28
Identities = 54/71 (76%), Positives = 62/71 (87%)
Query: 2 YAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKRCKHFELGG 61
+AQG+RRYDRKQSGFGGQTK IF KKAKTTKK+VLR+EC CK K QL +KRCKHFELGG
Sbjct: 35 FAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGG 94
Query: 62 EKKQKGQALQF 72
+KK +GQ +QF
Sbjct: 95 QKKSRGQVIQF 105
>Hs4506651 [J] KOG3464 60S ribosomal protein L44
Length = 106
Score = 120 bits (302), Expect = 3e-28
Identities = 55/74 (74%), Positives = 67/74 (90%), Gaps = 2/74 (2%)
Query: 1 MYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECM--SCKTKTQLALKRCKHFE 58
+YAQG+RRYDRKQSG+GGQTK IF KKAKTTKK+VLRLEC+ +C++K LA+KRCKHFE
Sbjct: 33 LYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFE 92
Query: 59 LGGEKKQKGQALQF 72
LGG+KK+KGQ +QF
Sbjct: 93 LGGDKKRKGQVIQF 106
>7297335 [J] KOG3464 60S ribosomal protein L44
Length = 122
Score = 117 bits (293), Expect = 3e-27
Identities = 53/70 (75%), Positives = 60/70 (85%)
Query: 3 AQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGE 62
AQG+RRYDRKQ GFGGQTK IF KKAKTTKK+VLR+EC CK + Q LKRCKHFELGG+
Sbjct: 53 AQGRRRYDRKQQGFGGQTKPIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGD 112
Query: 63 KKQKGQALQF 72
KK+KGQ +QF
Sbjct: 113 KKRKGQMIQF 122
>At4g14320 [J] KOG3464 60S ribosomal protein L44
Length = 105
Score = 114 bits (284), Expect = 3e-26
Identities = 51/68 (75%), Positives = 60/68 (88%)
Query: 3 AQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGE 62
AQGKRRYDRKQSG+GGQTK +FHKKAKTTKK+VLRL+C SCK +Q +KRCKHFE+GG+
Sbjct: 37 AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGD 96
Query: 63 KKQKGQAL 70
KK KG +L
Sbjct: 97 KKGKGTSL 104
>At3g23390 [J] KOG3464 60S ribosomal protein L44
Length = 105
Score = 114 bits (284), Expect = 3e-26
Identities = 51/68 (75%), Positives = 60/68 (88%)
Query: 3 AQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGE 62
AQGKRRYDRKQSG+GGQTK +FHKKAKTTKK+VLRL+C SCK +Q +KRCKHFE+GG+
Sbjct: 37 AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGD 96
Query: 63 KKQKGQAL 70
KK KG +L
Sbjct: 97 KKGKGTSL 104
>Hs22065075 [J] KOG3464 60S ribosomal protein L44
Length = 118
Score = 113 bits (282), Expect = 5e-26
Identities = 53/74 (71%), Positives = 64/74 (85%), Gaps = 2/74 (2%)
Query: 1 MYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECM--SCKTKTQLALKRCKHFE 58
+YAQGK RYDRKQSG+GGQTK IF KKAKTTKK+VL LEC+ +C++K LA +RCKHFE
Sbjct: 33 LYAQGKWRYDRKQSGYGGQTKPIFRKKAKTTKKIVLGLECIQPNCRSKRMLATERCKHFE 92
Query: 59 LGGEKKQKGQALQF 72
LGG+KK+KGQ +QF
Sbjct: 93 LGGDKKRKGQMIQF 106
>Hs22065135 [J] KOG3464 60S ribosomal protein L44
Length = 321
Score = 107 bits (268), Expect = 2e-24
Identities = 50/74 (67%), Positives = 63/74 (84%), Gaps = 2/74 (2%)
Query: 1 MYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECM--SCKTKTQLALKRCKHFE 58
+YAQGKRRYD+KQSG+G QTK IF KKAKTTKK+VLRLEC+ +C+ + L +KR KHF+
Sbjct: 248 LYAQGKRRYDQKQSGYGRQTKPIFQKKAKTTKKIVLRLECVESNCRFRRMLTIKRYKHFK 307
Query: 59 LGGEKKQKGQALQF 72
LGG+KK+KGQ +QF
Sbjct: 308 LGGDKKRKGQVIQF 321
>Hs22066131 [J] KOG3464 60S ribosomal protein L44
Length = 105
Score = 105 bits (263), Expect = 9e-24
Identities = 48/74 (64%), Positives = 62/74 (82%), Gaps = 2/74 (2%)
Query: 1 MYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECM--SCKTKTQLALKRCKHFE 58
+YAQGKRRYDRKQSG+GGQ + +F KKAKTTKK VLR EC+ +C++K + ++RCKHFE
Sbjct: 32 LYAQGKRRYDRKQSGYGGQRRPVFLKKAKTTKKTVLRPECVEPNCRSKRMVVIQRCKHFE 91
Query: 59 LGGEKKQKGQALQF 72
GG+KK+KGQ +QF
Sbjct: 92 PGGDKKRKGQEIQF 105
>Hs22058363 [J] KOG3464 60S ribosomal protein L44
Length = 93
Score = 104 bits (260), Expect = 2e-23
Identities = 50/71 (70%), Positives = 60/71 (84%), Gaps = 2/71 (2%)
Query: 4 QGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECM--SCKTKTQLALKRCKHFELGG 61
+GKR YD+KQSG+GGQTK IF KKAKTTKKVVLRLEC+ +C++K LA+ RCKHFELGG
Sbjct: 23 EGKRCYDQKQSGYGGQTKPIFWKKAKTTKKVVLRLECVEPNCRSKRMLAINRCKHFELGG 82
Query: 62 EKKQKGQALQF 72
KK+K Q +QF
Sbjct: 83 YKKRKDQVIQF 93
>Hs20555200 [J] KOG3464 60S ribosomal protein L44
Length = 143
Score = 90.9 bits (224), Expect = 3e-19
Identities = 44/69 (63%), Positives = 56/69 (80%), Gaps = 2/69 (2%)
Query: 1 MYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECM--SCKTKTQLALKRCKHFE 58
+YAQGK+ YD K SG+ GQTK+IF KKAKTTKK VLRLE + +C +K LA+K C+HFE
Sbjct: 73 LYAQGKQPYDGKHSGYDGQTKRIFQKKAKTTKKTVLRLERVEPNCISKRMLAIKICEHFE 132
Query: 59 LGGEKKQKG 67
LGG+KK++G
Sbjct: 133 LGGDKKKRG 141
>ECU10g1300 [J] KOG3464 60S ribosomal protein L44
Length = 104
Score = 90.1 bits (222), Expect = 5e-19
Identities = 43/70 (61%), Positives = 50/70 (71%)
Query: 3 AQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGE 62
AQG RRY RKQ G+GGQTK I +KAK TKK+VL LEC CK Q LKR KH GGE
Sbjct: 35 AQGNRRYARKQRGYGGQTKPILRRKAKVTKKLVLNLECTKCKFSHQKPLKRAKHVIFGGE 94
Query: 63 KKQKGQALQF 72
+K+KG+AL +
Sbjct: 95 RKRKGEALVY 104
>Hs22047108 [J] KOG3464 60S ribosomal protein L44
Length = 135
Score = 82.4 bits (202), Expect = 1e-16
Identities = 40/64 (62%), Positives = 52/64 (80%), Gaps = 2/64 (3%)
Query: 1 MYAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECM--SCKTKTQLALKRCKHFE 58
+YAQGK+ Y+RK SG+ GQT+ IF KKAKTTKK+VLRLEC+ +C++ LA+KR K FE
Sbjct: 33 LYAQGKKCYNRKPSGYCGQTEPIFRKKAKTTKKIVLRLECIEPNCRSTKVLAIKRYKDFE 92
Query: 59 LGGE 62
LGG+
Sbjct: 93 LGGD 96
>Hs17442298 [J] KOG3464 60S ribosomal protein L44
Length = 211
Score = 65.9 bits (159), Expect = 1e-11
Identities = 32/63 (50%), Positives = 49/63 (76%), Gaps = 4/63 (6%)
Query: 13 QSGFGGQTKQIFHKK-AKTTKKVVLRLECMS--CKTKTQLALKRCKHFELGGEKKQKGQA 69
++G+GGQTKQIF K KTTKK+V+RL+C+ C++K L +K+CK+F+LG +++ K Q
Sbjct: 150 RAGYGGQTKQIFWKSLCKTTKKIVMRLKCVEPKCRSKRMLTIKKCKNFKLGRDER-KSQM 208
Query: 70 LQF 72
+QF
Sbjct: 209 IQF 211
>Hs18573385_2 [J] KOG3464 60S ribosomal protein L44
Length = 65
Score = 63.2 bits (152), Expect = 6e-11
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 5 GKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQ 48
GK+ YDRK SG+GGQ+K IF KKAKTT+K+VLRLEC+ +++
Sbjct: 1 GKQHYDRKHSGYGGQSKPIFQKKAKTTEKIVLRLECVELNFRSE 44
>Hs18601762 [J] KOG3464 60S ribosomal protein L44
Length = 136
Score = 60.1 bits (144), Expect = 5e-10
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 5 GKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLE 39
GK YDRKQSG+GGQTK IF KKAKTTKK+VLRL+
Sbjct: 70 GKWHYDRKQSGYGGQTKPIFWKKAKTTKKIVLRLD 104
>Hs22066175_1 [J] KOG3464 60S ribosomal protein L44
Length = 445
Score = 44.3 bits (103), Expect = 3e-05
Identities = 19/27 (70%), Positives = 23/27 (84%)
Query: 1 MYAQGKRRYDRKQSGFGGQTKQIFHKK 27
+YAQGK+ YDRKQSG+ GQTK IF K+
Sbjct: 33 LYAQGKQCYDRKQSGYDGQTKLIFQKR 59
>CE24741 [T] KOG0789 Protein tyrosine phosphatase
Length = 428
Score = 30.8 bits (68), Expect = 0.35
Identities = 13/49 (26%), Positives = 26/49 (52%)
Query: 5 GKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKR 53
GK +Y+ K GG+TK + KK + V++ + + +T + +K+
Sbjct: 39 GKTKYEEKTVVHGGKTKNVVAKKVPSKASVIVDKKASTTETTVPITVKK 87
>CE17478 [T] KOG0789 Protein tyrosine phosphatase
Length = 430
Score = 30.8 bits (68), Expect = 0.35
Identities = 13/49 (26%), Positives = 26/49 (52%)
Query: 5 GKRRYDRKQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKR 53
GK +Y+ K GG+TK + KK + V++ + + +T + +K+
Sbjct: 39 GKTKYEEKTVVHGGKTKNVVAKKVPSKASVIVDKKASTTETTVPITVKK 87
>CE20651 [A] KOG0947 Cytoplasmic exosomal RNA helicase SKI2 DEAD-box
superfamily
Length = 1260
Score = 28.1 bits (61), Expect = 2.3
Identities = 14/44 (31%), Positives = 28/44 (62%), Gaps = 2/44 (4%)
Query: 12 KQSGFGGQTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKRCK 55
++ FGG T +F + +++ K V+ RLE ++ K K+Q++ C+
Sbjct: 1136 REMQFGGDT--VFGEISESVKSVLTRLESVASKHKSQISDLGCE 1177
>Hs22048689 [J] KOG3464 60S ribosomal protein L44
Length = 193
Score = 27.3 bits (59), Expect = 3.9
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 2 YAQGKRRYDRKQSGF 16
YAQGK R D+KQSG+
Sbjct: 33 YAQGKMRCDQKQSGY 47
>7298147 [G] KOG2119 Predicted bile acid beta-glucosidase
Length = 845
Score = 27.3 bits (59), Expect = 3.9
Identities = 13/62 (20%), Positives = 31/62 (49%), Gaps = 6/62 (9%)
Query: 10 DRKQSGFGGQTKQIFHK---KAKTTKKVVLRLEC---MSCKTKTQLALKRCKHFELGGEK 63
++KQ GG Q+ + K + ++ + + C ++C+ ++++ RC F+ G
Sbjct: 189 NKKQDAEGGAESQLISEGNAKGVSIRQKISEMPCSYNLACRVLPEISITRCPQFDPAGNG 248
Query: 64 KQ 65
+Q
Sbjct: 249 EQ 250
>Hs17482271 [R] KOG1721 FOG: Zn-finger
Length = 527
Score = 26.2 bits (56), Expect = 8.7
Identities = 15/47 (31%), Positives = 24/47 (50%), Gaps = 1/47 (2%)
Query: 13 QSGFGGQTKQIFHKKAKTTKKVVLRLECM-SCKTKTQLALKRCKHFE 58
Q GF ++K FH++ T +K +C S K+QL + + H E
Sbjct: 338 QKGFSDKSKLTFHQRTHTGEKPYGCSKCQKSFSNKSQLMIHQRAHTE 384
>At3g58750 [C] KOG2617 Citrate synthase
Length = 514
Score = 26.2 bits (56), Expect = 8.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 2 YAQGKRRYDRKQSGFGGQTKQIFHKKAKTTKKV 34
+ +G + RK SGFG + + + +AK KK+
Sbjct: 347 FIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKL 379
>7301603 [T] KOG1217 Fibrillins and related proteins containing Ca2+-binding
EGF-like domains
Length = 1511
Score = 26.2 bits (56), Expect = 8.7
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 19 QTKQIFHKKAKTTKKVVLRLECMSCKTKTQLALKRCKH 56
QTK +FH + + +C K K LA +R H
Sbjct: 1069 QTKNLFHNELACNSVCPVLTQCERLKLKNNLAAQRTGH 1106
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,014,346
Number of Sequences: 60738
Number of extensions: 120071
Number of successful extensions: 357
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 322
Number of HSP's gapped (non-prelim): 28
length of query: 72
length of database: 30,389,216
effective HSP length: 48
effective length of query: 24
effective length of database: 27,473,792
effective search space: 659371008
effective search space used: 659371008
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)