ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV2024 good F KOG3127 Nucleotide transport and metabolism Deoxycytidylate deaminase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV2024 689807 688788 -340
(340 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YHR144c [F] KOG3127 Deoxycytidylate deaminase 311 1e-84
SPBC2G2.13c [F] KOG3127 Deoxycytidylate deaminase 240 2e-63
7293676 [F] KOG3127 Deoxycytidylate deaminase 65 1e-10
Hs4503277 [F] KOG3127 Deoxycytidylate deaminase 59 1e-08
>YHR144c [F] KOG3127 Deoxycytidylate deaminase
Length = 312
Score = 311 bits (796), Expect = 1e-84
Identities = 169/333 (50%), Positives = 214/333 (63%), Gaps = 23/333 (6%)
Query: 1 MLIGISGTLFSDVEIVGQALSEIYDAPWLDVETLGGWDTLLDYGTKNFTKSYVVQGIDSM 60
MLIG+SGT F E V L + + L+ L + +LDY TKN+TK+ V+ ++ +
Sbjct: 1 MLIGVSGTKFCGCEDVINMLVDHFHFELLN--HLDNPEEILDYATKNYTKNSVIF-LEKL 57
Query: 61 VILEKLAKRPFFVHIAVDCTLARRLENWRNALNDGTNVVVNGGSKGKDHAPLNCHSIEQI 120
+LEKL KRPFFVH+++D + R+ +R S+EQI
Sbjct: 58 SLLEKLEKRPFFVHLSIDAPVTTRVALYRKTTQ------------------AESLSLEQI 99
Query: 121 LESMDFFDYAKEDSLTSINERSLIKVVFHSTVPF-ESVKKQLYEQLNNVIDSKSLTAPL- 178
++++D D+ E K+V +S+ + QL + D + APL
Sbjct: 100 IQAIDQHDFQPEGIKLREKSHLRFKIVNEDRRGRRQSLINNITTQLKILDDKEKQMAPLM 159
Query: 179 RPCWDTYFMKLANLAASRANCMKRRVGCVIVRDCRVVATGYNGTPRNMKNCNQGGCSRCN 238
RP WD+YFMKLA LAASR+NCMKRRVGCVIVR+CRV+ATGYNGTPR++ NC GGC RCN
Sbjct: 160 RPSWDSYFMKLATLAASRSNCMKRRVGCVIVRECRVIATGYNGTPRHLTNCFNGGCPRCN 219
Query: 239 DGDDKSLHTCLCLHAEENALLEAGRDRVGPNAILYCDTCPCLTCSVKIVQTGIKEVVYSH 298
DGD ++LHTCLCLHAEENALLEAGRDRVG NA LYCDTCPCLTCSVKIVQTGI EVVYS
Sbjct: 220 DGDSRNLHTCLCLHAEENALLEAGRDRVGQNATLYCDTCPCLTCSVKIVQTGISEVVYSQ 279
Query: 299 SYRMDEQSLKVLRDGKVTVRQHKLIDERTTIHI 331
SYRMDE+S KVL++ +TVRQ +E + I
Sbjct: 280 SYRMDEESFKVLKNAGITVRQFSFTEEPRIVMI 312
>SPBC2G2.13c [F] KOG3127 Deoxycytidylate deaminase
Length = 348
Score = 240 bits (612), Expect = 2e-63
Identities = 141/346 (40%), Positives = 200/346 (57%), Gaps = 37/346 (10%)
Query: 3 IGISGTLFSDVEIVGQAL------SEIYDAPWLDVE----------TLGGWDTLLDYGTK 46
+G++G L S + V + L + I+ P L+ + LG D L+ Y T
Sbjct: 4 VGLTGPLCSGKDAVVEYLETKHGFNAIFRLPQLNEDGEYIYRTGDLVLGSVDDLISYLTP 63
Query: 47 NFTKSYVVQGIDSMVILEKLAKRPFFVHIAVDCTLARRLENWR--------NALNDGTNV 98
+ + +V+ GI S +L L KRPFF+ + +D + R ++ + + + +
Sbjct: 64 RWRERFVINGIHSPRLLSALLKRPFFLLVYIDAPIMLRFNRYKTYVILQCQHVVANFKFI 123
Query: 99 VVNGGSKGKDHAPLNCHSIEQILESMDFFDYAKEDSLTSINERSLIKVVFHSTVPFESVK 158
V+ + ++ L ++E+ D + +++ T R+L ++ ++ ++K
Sbjct: 124 VIILHAMCSVYSSLANTTLEEFCSIQDAAAFQSDNAGT--RHRALANLLINND---SNIK 178
Query: 159 KQLYEQLNNVIDSKSLTAP--LRPCWDTYFMKLANLAASRANCMKRRVGCVIVRDCRVVA 216
L+E+L L P RP WD+YFM++A+LAA R+NCMKRRVGCV+VR RV+A
Sbjct: 179 LHLWEKLQKA----DLLNPNRFRPSWDSYFMEMASLAAKRSNCMKRRVGCVLVRGNRVIA 234
Query: 217 TGYNGTPRNMKNCNQGGCSRCNDGDD--KSLHTCLCLHAEENALLEAGRDRVGPNAILYC 274
TGYNGTPR NCN+GGC RCN K L TCLCLHAEENALLEAGR+RVG NAILYC
Sbjct: 235 TGYNGTPRGATNCNEGGCPRCNSASSCGKELDTCLCLHAEENALLEAGRERVGNNAILYC 294
Query: 275 DTCPCLTCSVKIVQTGIKEVVYSHSYRMDEQSLKVLRDGKVTVRQH 320
DTCPCLTCSVKI Q GIKEVVY SY MD + +L+ V +RQ+
Sbjct: 295 DTCPCLTCSVKITQLGIKEVVYHTSYNMDSHTASLLQAAGVQLRQY 340
>7293676 [F] KOG3127 Deoxycytidylate deaminase
Length = 203
Score = 65.1 bits (157), Expect = 1e-10
Identities = 50/160 (31%), Positives = 77/160 (47%), Gaps = 15/160 (9%)
Query: 182 WDTYFMKLANLAASRANCMKRRVG-CVIVRDCRVVATGYNGTPRNMK------NCNQGGC 234
WD YFM + L+A R+ +VG C++ R+VA GYNG PRN + + G
Sbjct: 28 WDDYFMATSLLSAKRSKDPVTQVGACIVDSQNRIVAIGYNGFPRNCSDDVFPWSKAKKGS 87
Query: 235 SRCNDGDDKSLHTCLCLHAEENALLEA-GRDRVGPNAILYCDTCPCLTCSVKIVQTGIKE 293
+ +DK ++ +HAE NA+L + G G LY PC C+ I+Q GI +
Sbjct: 88 QEFDPLEDKKMYV---VHAEANAILNSNGMSLSGTR--LYTTLFPCNECAKLIIQVGISQ 142
Query: 294 VVYSHSYRMDEQSLKVLRD--GKVTVRQHKLIDERTTIHI 331
V+Y D+ + + + V V + I ++ TI I
Sbjct: 143 VLYLSDKYADKPTYRASKRMLDAVGVEYKRHIPQKKTITI 182
>Hs4503277 [F] KOG3127 Deoxycytidylate deaminase
Length = 178
Score = 58.5 bits (140), Expect = 1e-08
Identities = 43/140 (30%), Positives = 61/140 (42%), Gaps = 22/140 (15%)
Query: 182 WDTYFMKLANLAASRANCMKRRVG-CVIVRDCRVVATGYNGTPRNMKNCNQGGCSRC--- 237
W YFM +A L+A R+ +VG C++ + ++V GYNG P GCS
Sbjct: 15 WPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPN--------GCSDDVLP 66
Query: 238 ------NDGDDKSLHTCLCLHAEENALLEAGRDRVGPNAILYCDTCPCLTCSVKIVQTGI 291
N D K + C HAE NA++ V +Y PC C+ I+Q GI
Sbjct: 67 WRRTAENKLDTKYPYVC---HAELNAIMNKNSTDV-KGCSMYVALFPCNECAKLIIQAGI 122
Query: 292 KEVVYSHSYRMDEQSLKVLR 311
KEV+++ D R
Sbjct: 123 KEVIFTSDKYHDSDEATAAR 142
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.137 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,321,554
Number of Sequences: 60738
Number of extensions: 869358
Number of successful extensions: 2003
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1992
Number of HSP's gapped (non-prelim): 4
length of query: 340
length of database: 30,389,216
effective HSP length: 107
effective length of query: 233
effective length of database: 23,890,250
effective search space: 5566428250
effective search space used: 5566428250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)