ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV2049   suspect: LH   G     KOG1616  Carbohydrate transport and metabolism                          Protein involved in Snf1 protein kinase complex assembly

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV2049 698125  699492 456  
         (456 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YHR146w [G] KOG1616 Protein involved in Snf1 protein kinase comp...   117   5e-26
YNL173c [G] KOG1616 Protein involved in Snf1 protein kinase comp...    82   1e-15

>YHR146w [G] KOG1616 Protein involved in Snf1 protein kinase complex
           assembly
          Length = 465

 Score =  117 bits (292), Expect = 5e-26
 Identities = 92/334 (27%), Positives = 139/334 (41%), Gaps = 38/334 (11%)

Query: 1   MVEYTFTWPKGPQEVVVTGNFDNWTGSLPLVKQPSGDFSLTMPLP-PNXXXXXXXXXXXX 59
           M  YTF+WP GP++V++TG FD+W G+LPLVK   G+F +TMP+   N            
Sbjct: 6   MFNYTFSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVD 65

Query: 60  GEWVVSDKYEKDS-SAGPINNVIYTSKIVGT--TTGSTFIPESALSAKTSQKPKSQPAPG 116
           G W VSD Y+K+  S G  NN +  + +V T    G++ IPE+       + P+S   P 
Sbjct: 66  GVWCVSDSYKKEHVSEGIENNFLQITDLVETQEVAGASRIPEAG-GLLCGKPPRSAGPPS 124

Query: 117 -SNXXXXXXXXXXXXXXXXXXXTGEQTVISEERXXXXXXXXXXXXXXXXXXXXXKEVTPL 175
            SN                   T      +E                       +E TPL
Sbjct: 125 TSNRKKNKRNNKKRRSKLKKKSTKNNKKSNESLDDNEEEDGVTGTTTEDVTGTSREETPL 184

Query: 176 PPQTATTEPADDEEATAPVPAVLPSKENQQTTLGEPGIAIVPNPNEIAAFKEVRNVDAQK 235
              T  ++ A       P+     + ++    +G PG  +VPNP EI  F E+R+VDA++
Sbjct: 185 AEPTNVSKEAPGNFHILPIDQSADTTQS-NGIIGGPGPVLVPNPGEIKEFTEIRDVDARE 243

Query: 236 LNEQLNXXXXXXXXXXXXXXXQQXXXXXXXXXXXXXXXXXNPTDDVAPVIQSATEPAVQT 295
           LNE+LN                                  +   + +P +  A +P V+T
Sbjct: 244 LNERLN-------------------KKEEVPEPVAGPIVESSVTEKSPALPQADDPIVET 284

Query: 296 EQL--------EQEKAVA----EPETVPTQDATI 317
           +++         Q +AV     EPE +PT +A I
Sbjct: 285 KEVAHNVQELTPQVEAVTPLINEPEPLPTPEAQI 318


>YNL173c [G] KOG1616 Protein involved in Snf1 protein kinase complex
           assembly
          Length = 366

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 4/148 (2%)

Query: 3   EYTFTWPKGPQEVVVTGNFDNWTGSLPLVKQPSGDFSLTMPLP-PNXXXXXXXXXXXXGE 61
           ++TF WPKGP+ +++TG FD+W G+LP+VK PSG F +T+P+   +            G+
Sbjct: 7   QFTFKWPKGPEAIILTGTFDDWKGTLPMVKDPSGAFEITLPVTFDSPSSKFYFKFIVDGQ 66

Query: 62  WVVSDKYEKDSSAGPINNVIYTSKIV--GTTTGSTFIPESALSAKTSQKPKSQPAPGSNX 119
           W+ S  Y+ +   G  NN I    ++       ST +PESA  A +   P  +P      
Sbjct: 67  WLPSKDYKVNIDEGVENNFITEEDVIKQRENGSSTLVPESAGLAVSKNAPLIEP-EAEKR 125

Query: 120 XXXXXXXXXXXXXXXXXXTGEQTVISEE 147
                             TGE+++ S+E
Sbjct: 126 AKKLRKFKIKRVIKTNKQTGERSIFSQE 153


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.304    0.125    0.343 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,027,942
Number of Sequences: 60738
Number of extensions: 686492
Number of successful extensions: 1711
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1706
Number of HSP's gapped (non-prelim): 2
length of query: 456
length of database: 30,389,216
effective HSP length: 110
effective length of query: 346
effective length of database: 23,708,036
effective search space: 8202980456
effective search space used: 8202980456
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)