ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV2169 good J KOG3323 Translation, ribosomal structure and biogenesis D-Tyr-tRNA (Tyr) deacylase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV2169 738918 738469 -150
(150 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDL219w [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase 203 8e-53
SPAC8C9.05 [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase 158 3e-39
HsM18201876 [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase 124 6e-29
CE20080 [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase 124 6e-29
Hs21361785_1 [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase 122 1e-28
7299447 [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase 111 4e-25
At4g18460 [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase 94 7e-20
>YDL219w [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase
Length = 150
Score = 203 bits (516), Expect = 8e-53
Identities = 99/148 (66%), Positives = 122/148 (81%)
Query: 1 MRIVLQKVSEASVTVGSAVVSQIKHGYMLLVGIGTDDKLEDIDKLSKKILTFRGFDDDAG 60
M+IVLQKVS+ASV V S V+S IKHGYMLLVGI DD + +IDKLSKK+L+ R F+D++
Sbjct: 1 MKIVLQKVSQASVVVDSKVISSIKHGYMLLVGISIDDSMAEIDKLSKKVLSLRIFEDESR 60
Query: 61 YGWKRNISEVDGEILCVSQFTLMARTSKGTKPDFHLAQRGELANELYGQFMDKLKAGLGD 120
WK+NI E +GEIL VSQFTLMA+T KGTKPDFHLAQ+G +A ELY +F+ L++ LG+
Sbjct: 61 NLWKKNIKEANGEILSVSQFTLMAKTKKGTKPDFHLAQKGHIAKELYEEFLKLLRSDLGE 120
Query: 121 DKVQNGVFGAMMSCKLTNEGPVTIIFDS 148
+KV++G FGAMMSC LTNEGPVTII DS
Sbjct: 121 EKVKDGEFGAMMSCSLTNEGPVTIILDS 148
>SPAC8C9.05 [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase
Length = 149
Score = 158 bits (399), Expect = 3e-39
Identities = 79/149 (53%), Positives = 106/149 (71%), Gaps = 1/149 (0%)
Query: 1 MRIVLQKVSEASVTVGSAVVSQIKHGYMLLVGIGTDDKLEDIDKLSKKILTFRGFDDDAG 60
M+ V+Q+V ASV+V +VS I+ GY +L+G+G+DD ED+ KLS KIL + FD+ A
Sbjct: 1 MKAVIQRVLNASVSVDDKIVSAIQQGYCILLGVGSDDTPEDVTKLSNKILKLKLFDN-AE 59
Query: 61 YGWKRNISEVDGEILCVSQFTLMARTSKGTKPDFHLAQRGELANELYGQFMDKLKAGLGD 120
WK I+++ GEILCVSQFTL AR +KG KPDFH + +G A ELY Q + L LG
Sbjct: 60 QPWKSTIADIQGEILCVSQFTLHARVNKGAKPDFHRSMKGPEAIELYEQVVKTLGESLGS 119
Query: 121 DKVQNGVFGAMMSCKLTNEGPVTIIFDSK 149
DK++ GVFGAMM+ +L N GPVTI++D+K
Sbjct: 120 DKIKKGVFGAMMNVQLVNNGPVTILYDTK 148
>HsM18201876 [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase
Length = 209
Score = 124 bits (310), Expect = 6e-29
Identities = 62/150 (41%), Positives = 95/150 (63%), Gaps = 1/150 (0%)
Query: 1 MRIVLQKVSEASVTVGSAVVSQIKHGYMLLVGIGTDDKLEDIDKLSKKILTFRGFDDDAG 60
M+ V+Q+V+ ASVTVG +S I G +L+GI +D ++++ + +KIL R F+D++G
Sbjct: 1 MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESG 60
Query: 61 YGWKRNISEVDGEILCVSQFTLMARTSKGTKPDFHLAQRGELANELYGQFMDKLKAGLGD 120
W +++ + EILCVSQFTL KG KPDFHLA E A Y F+++L+
Sbjct: 61 KHWSKSVMDKQYEILCVSQFTLQC-VLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRP 119
Query: 121 DKVQNGVFGAMMSCKLTNEGPVTIIFDSKA 150
+ +++G FGA M ++ N+GPVTI +S A
Sbjct: 120 ELIKDGKFGAYMQVRIQNDGPVTIELESPA 149
>CE20080 [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase
Length = 150
Score = 124 bits (310), Expect = 6e-29
Identities = 65/149 (43%), Positives = 92/149 (61%), Gaps = 1/149 (0%)
Query: 1 MRIVLQKVSEASVTVGSAVVSQIKHGYMLLVGIGTDDKLEDIDKLSKKILTFRGFDDDAG 60
M++VLQ+V+ A+VTVG VV I G +LVG+ DD ED+ + +KIL R F
Sbjct: 1 MKVVLQRVTRAAVTVGDEVVGSIGRGLCVLVGVHRDDTEEDMKYIIRKILNLRVFPASEQ 60
Query: 61 YGWKRNISEVDGEILCVSQFTLMARTSKGTKPDFHLAQRGELANELYGQFMDKLKAGLGD 120
W +++ ++D E+L VSQFTL + KG K DFH A A++ Y F++ +K
Sbjct: 61 KPWDKSVMDLDLEVLSVSQFTLYGQ-FKGNKLDFHTAMAPTEASKFYASFLEAMKKAYKA 119
Query: 121 DKVQNGVFGAMMSCKLTNEGPVTIIFDSK 149
DK+Q+G F AMMS + N+GPVT+ FDSK
Sbjct: 120 DKIQDGKFAAMMSVDIVNDGPVTVTFDSK 148
>Hs21361785_1 [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase
Length = 158
Score = 122 bits (307), Expect = 1e-28
Identities = 62/150 (41%), Positives = 94/150 (62%), Gaps = 1/150 (0%)
Query: 1 MRIVLQKVSEASVTVGSAVVSQIKHGYMLLVGIGTDDKLEDIDKLSKKILTFRGFDDDAG 60
M+ V+Q+V+ ASVTVG +S I G +L+GI +D ++++ + +KIL R F+D++G
Sbjct: 1 MKAVVQRVTRASVTVGGEQISAIGRGICVLLGISLEDTQKELEHMVRKILNLRVFEDESG 60
Query: 61 YGWKRNISEVDGEILCVSQFTLMARTSKGTKPDFHLAQRGELANELYGQFMDKLKAGLGD 120
W +++ + EILCVSQFTL KG KPDFHLA E A Y F+++L+
Sbjct: 61 KHWSKSVMDKQYEILCVSQFTLQC-VLKGNKPDFHLAMPTEQAEGFYNSFLEQLRKTYRP 119
Query: 121 DKVQNGVFGAMMSCKLTNEGPVTIIFDSKA 150
+ +++G FGA M + N+GPVTI +S A
Sbjct: 120 ELIKDGKFGAYMQVHIQNDGPVTIELESPA 149
>7299447 [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase
Length = 153
Score = 111 bits (277), Expect = 4e-25
Identities = 64/148 (43%), Positives = 91/148 (61%), Gaps = 7/148 (4%)
Query: 1 MRIVLQKVSEASVTVGSAVVSQIKHGYMLLVGIGTDDKLEDIDKLSKKILTFRGFDDDAG 60
MR V+Q+V A VTV +VS I G +LVGI D +D++ L +KIL R F+++ G
Sbjct: 1 MRAVIQRVKAAKVTVLDELVSSIGPGLCVLVGIKASDTAKDVEYLVRKILALRLFEEE-G 59
Query: 61 YGWKRNISEVDGEILCVSQFTLMARTSKGTKPDFHLAQRGELANELYGQFMDKLKAGLGD 120
W++++ +++ E+LCVSQFTL R KG KPDF A +GE A ELY QF+D+L
Sbjct: 60 KRWQKSVKDLNLELLCVSQFTLYHRL-KGNKPDFLAAMKGEEAQELYNQFLDRLGQSYDS 118
Query: 121 DKVQNGVFGAMMSCKLTNEGPVTIIFDS 148
K++ A M + N+GPVTI +S
Sbjct: 119 TKIK-----AYMQVHIENDGPVTINLES 141
>At4g18460 [J] KOG3323 D-Tyr-tRNA (Tyr) deacylase
Length = 190
Score = 94.0 bits (232), Expect = 7e-20
Identities = 55/147 (37%), Positives = 81/147 (54%), Gaps = 13/147 (8%)
Query: 1 MRIVLQKVSEASVTVGSAVVSQIKHGYMLLVGIGTDDKLEDIDKL-----------SKKI 49
MR V+Q+VS +SVTV +VS+I G ++L+GI D D D + +K+
Sbjct: 44 MRAVIQRVSSSSVTVDGRIVSEIGPGLLVLIGIHESDTESDADYILQILKLKHVYRCRKV 103
Query: 50 LTFRGFDDDA-GYGWKRNISEVDGEILCVSQFTLMARTSKGTKPDFHLAQRGELANELYG 108
L R F ++ G GW +N+ + + +L VSQFTL KG KPDFH+A + A Y
Sbjct: 104 LNMRLFSNETTGKGWDQNVMQRNYGVLLVSQFTLYGFL-KGNKPDFHVAMPPDKAKPFYA 162
Query: 109 QFMDKLKAGLGDDKVQNGVFGAMMSCK 135
++K + D V++GVFGAMM +
Sbjct: 163 SLVEKFQKAYNPDAVKDGVFGAMMQVR 189
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.137 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,444,565
Number of Sequences: 60738
Number of extensions: 334251
Number of successful extensions: 700
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 685
Number of HSP's gapped (non-prelim): 7
length of query: 150
length of database: 30,389,216
effective HSP length: 97
effective length of query: 53
effective length of database: 24,497,630
effective search space: 1298374390
effective search space used: 1298374390
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)