ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV2347 good O KOG0529 Posttranslational modification, protein turnover, chaperones Protein geranylgeranyltransferase type II, alpha subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV2347 Similar to YJL031c SP|Q00618 BET4 geranylgeranyl
transferase, alpha chain {P2.311.f2.1}
(290 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJL031c [O] KOG0529 Protein geranylgeranyltransferase type II al... 328 4e-90
SPCC1620.05 [O] KOG0529 Protein geranylgeranyltransferase type I... 195 6e-50
Hs4759016 [O] KOG0529 Protein geranylgeranyltransferase type II ... 121 1e-27
CE19541 [O] KOG0529 Protein geranylgeranyltransferase type II al... 119 5e-27
At4g24490 [O] KOG0529 Protein geranylgeranyltransferase type II ... 119 5e-27
7296795 [O] KOG0529 Protein geranylgeranyltransferase type II al... 102 6e-22
At5g41820 [O] KOG0529 Protein geranylgeranyltransferase type II ... 92 7e-19
YKL019w [O] KOG0530 Protein farnesyltransferase alpha subunit/pr... 80 3e-15
Hs4503771 [O] KOG0530 Protein farnesyltransferase alpha subunit/... 78 1e-14
7295671 [O] KOG0530 Protein farnesyltransferase alpha subunit/pr... 78 1e-14
SPAPB1A10.04c [O] KOG0530 Protein farnesyltransferase alpha subu... 70 3e-12
At3g59380 [O] KOG0530 Protein farnesyltransferase alpha subunit/... 69 1e-11
CE18099 [O] KOG0530 Protein farnesyltransferase alpha subunit/pr... 62 1e-09
7290303 [O] KOG0529 Protein geranylgeranyltransferase type II al... 59 6e-09
ECU02g1060 [O] KOG0529 Protein geranylgeranyltransferase type II... 44 3e-04
At5g22770 [U] KOG1077 Vesicle coat complex AP-2 alpha subunit 37 0.043
At5g22780 [U] KOG1077 Vesicle coat complex AP-2 alpha subunit 36 0.074
Hs4757914 [D] KOG3573 Caspase apoptotic cysteine protease 34 0.28
At1g07880 [T] KOG0660 Mitogen-activated protein kinase 33 0.48
At5g36870 [M] KOG0916 13-beta-glucan synthase/callose synthase c... 32 1.1
7290299 [D] KOG1915 Cell cycle control protein (crooked neck) 32 1.1
SPBC119.11c [A] KOG1817 Ribonuclease 31 2.4
At4g35800 [K] KOG0260 RNA polymerase II large subunit 31 2.4
Hs4503353 [U] KOG1013 Synaptic vesicle protein rabphilin-3A 30 3.1
7292152 [Z] KOG3595 Dyneins heavy chain 30 4.0
YGR184c [O] KOG1140 N-end rule pathway recognition component UBR1 30 5.3
At2g27280 [S] KOG2117 Uncharacterized conserved protein 30 5.3
YPR108w [O] KOG0687 26S proteasome regulatory complex subunit RP... 29 6.9
At4g27220 [T] KOG4658 Apoptotic ATPase 29 6.9
At5g45990 [D] KOG1915 Cell cycle control protein (crooked neck) 29 9.0
>YJL031c [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 290
Score = 328 bits (842), Expect = 4e-90
Identities = 158/286 (55%), Positives = 205/286 (71%), Gaps = 3/286 (1%)
Query: 1 MKNKRVANKDSLLKTTQLLNINPEFNTIWNYRREIIKLLAPSLDQTFWDGELAFTMDKLK 60
M+++++ + ++L KT++LL NPEFN IWNYRR+II LA L+ FWD EL F M LK
Sbjct: 1 MRDEKIYSIEALKKTSELLEKNPEFNAIWNYRRDIIASLASELEIPFWDKELVFVMMLLK 60
Query: 61 VRPKVYWIWNHRVWCLEHYPNSPLKIWLKELAIVGKLLEMDARNFHGWHYRRYIVSTVER 120
PKVYWIWNHR+W L+HYP S K+W ELA+V KLLE DARN+HGWHYRR +V +E
Sbjct: 61 DYPKVYWIWNHRLWVLKHYPTSSPKVWQTELAVVNKLLEQDARNYHGWHYRRIVVGNIES 120
Query: 121 LSGNCLNSQEFEYTTAKINQNISNFSAWFQRTNIIEHMLARDQIADKESFIDDEFQYIKN 180
++ L+ +EFEYTT KIN NISN+SAW QR II M + ++ +++ +I E YI N
Sbjct: 121 ITNKSLDKEEFEYTTIKINNNISNYSAWHQRVQIISRMFQKGEVGNQKEYIRTEISYIIN 180
Query: 181 AMFTDAEDQSVWTYLIWFIKESALKEHMTSEKYSSMLKELTEIIELINDDDISFSGKDNI 240
AMFTDAEDQSVW Y+ WFIK + + + ++Y MLK+L E I LIN+D+I FSGK NI
Sbjct: 181 AMFTDAEDQSVWFYIKWFIKNDIVCKTLDEQEYLKMLKDLRENILLINNDEIEFSGKQNI 240
Query: 241 WCLKTLLVIEFIQKDILKEDIKSKSRE-YLDKLIIIDPLRKNRYLY 285
WCLK LLV+E I ++ KE + +S E YL +LI DPLRKNRYL+
Sbjct: 241 WCLKILLVLEDILEE--KEALTERSSEQYLVQLIDADPLRKNRYLH 284
>SPCC1620.05 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 344
Score = 195 bits (496), Expect = 6e-50
Identities = 119/304 (39%), Positives = 175/304 (57%), Gaps = 32/304 (10%)
Query: 2 KNKRVANKDSLLKTTQLLNINPEFNTIWNYRREII-----KLLAPSLDQTFWDGELAFTM 56
+ ++ ++ +L TT+LL+ NPE ++WNYRREI+ ++ + Q D EL + +
Sbjct: 39 RKRKDYSEGNLKLTTELLDWNPETYSVWNYRREILLNDVFPKISLNEKQDLLDNELKYVL 98
Query: 57 DKLKVRPKVYWIWNHRVWCLEHYPNSPLKIWLKELAIVGKLLEMDARNFHGWHYRRYIVS 116
K+KV PKVYWI+NHR WCLE N+P W E+ I KLL DARNFHGWHYRRY+VS
Sbjct: 99 SKMKVFPKVYWIFNHRRWCLE---NAPYPNWNYEMMITEKLLSADARNFHGWHYRRYVVS 155
Query: 117 TVERLSGNC-LNSQEFEYTTAKINQNISNFSAWFQRTNIIEHML-----ARDQIADKESF 170
+ER +GNC L +E EYTT+ I N SNFSA RT +IE +L Q A +
Sbjct: 156 QIER-AGNCSLAKKEMEYTTSAIATNFSNFSALHNRTKLIETILNLEADPNSQKALAKQI 214
Query: 171 IDDEFQYIKNAMFTDAEDQSVWTYLIWFI------KESALKEHMTSEKYSSMLKELTEII 224
++ E I A+FTD +D SVW Y W + + L +T E+ L++ E+I
Sbjct: 215 LEQELDMIHQAVFTDPDDSSVWIYHRWLMGHCNPNSMTPLISMITIEERIQYLQKEIELI 274
Query: 225 ELINDDDISFSGKDNIWCLKTLLVIEFIQKDILKE-----DIKSKSREYLDKLIIIDPLR 279
+ +++ + +N WC ++L+ E + K + K+ DIK + +DK+I +DP R
Sbjct: 275 QELHEME-----PENRWCCESLVNYEALCKTLEKQKPTEADIK-RWTLLVDKMIKVDPQR 328
Query: 280 KNRY 283
+ RY
Sbjct: 329 RGRY 332
>Hs4759016 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 567
Score = 121 bits (303), Expect = 1e-27
Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 16/193 (8%)
Query: 15 TTQLLNINPEFNTIWNYRREIIKLL----APSLDQTFWDGELAFTMDKLKVRPKVYWIWN 70
T+Q+L NP+F T+WN RRE+++ L +P EL F L+V PK Y W+
Sbjct: 52 TSQILGANPDFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYGTWH 111
Query: 71 HRVWCLEHYPNSPLKIWLKELAIVGKLLEMDARNFHGWHYRRYIVSTVERLSGNCLNSQE 130
HR W L P W +EL + + LE+D RNFH W YRR++ + ++E
Sbjct: 112 HRCWLLGRLPEPN---WTRELELCARFLEVDERNFHCWDYRRFVAT-----QAAVPPAEE 163
Query: 131 FEYTTAKINQNISNFSAWFQRTNIIEHMLARDQIADKESFIDD----EFQYIKNAMFTDA 186
+T + I +N SN+S+W R+ ++ + + + +D E + ++NA FTD
Sbjct: 164 LAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDP 223
Query: 187 EDQSVWTYLIWFI 199
DQS W Y W +
Sbjct: 224 NDQSAWFYHRWLL 236
Score = 29.6 bits (65), Expect = 5.3
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 14/100 (14%)
Query: 29 WNYRREIIKLLAPSLDQTFWDGELAFTMDKLKVRPKVYWIWNHRVWCLEHY---PNS--- 82
W+YRR + A + ELAFT + Y W++R L P+S
Sbjct: 146 WDYRRFVATQAAVPPAE-----ELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQ 200
Query: 83 ---PLKIWLKELAIVGKLLEMDARNFHGWHYRRYIVSTVE 119
P + LKEL +V D + W Y R+++ +
Sbjct: 201 GRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAD 240
>CE19541 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 580
Score = 119 bits (298), Expect = 5e-27
Identities = 85/276 (30%), Positives = 127/276 (45%), Gaps = 45/276 (16%)
Query: 2 KNKRVANKDSLLKTTQ-LLNINPEFNTIWNYRREIIKL-------LAPSLD--------- 44
K ++ D +L TQ +L N + T WN RR I+L + S D
Sbjct: 38 KREKGEYDDEILSLTQAILEKNADIYTFWNIRRTTIELRMEANEKVQQSADAEEEEKTKS 97
Query: 45 ----QTFWDGELAFTMDKLKVRPKVYWIWNHRVWCLEHYPNSPLKIWLKELAIVGKLLEM 100
+ GEL + + +K PK Y W R W L+ K KELA+ K L++
Sbjct: 98 SQKIENLLAGELFLSYECIKSNPKSYSAWYQRAWALQRQSAPDFK---KELALCEKALQL 154
Query: 101 DARNFHGWHYRRYIVSTVERLSGNCLNSQEFEYTTAKINQNISNFSAWFQRTNIIEHMLA 160
D RNFH W +RR + +R ++E E++ IN N SN+SAW R+ +++ +
Sbjct: 155 DCRNFHCWDHRRIVARMAKRSE-----AEELEFSNKLINDNFSNYSAWHYRSIALKN-IH 208
Query: 161 RDQIADKESFIDD----EFQYIKNAMFTDAEDQSVWTYLIWFIKESALKEHMTSEKYSSM 216
RD+ D+ E Q +KNA F DAEDQS WTY W ++ + KE + E ++
Sbjct: 209 RDEKTGAPKIDDELIASELQKVKNAFFMDAEDQSAWTYTRWLLEVGSGKEFLRPESHTP- 267
Query: 217 LKELTEIIELINDDDISFSGKDNIWCLKTLLVIEFI 252
IELI+ SF G + + I+F+
Sbjct: 268 -------IELIS---ASFHGNNTTLVFSRAVTIQFL 293
>At4g24490 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 683
Score = 119 bits (298), Expect = 5e-27
Identities = 67/205 (32%), Positives = 110/205 (52%), Gaps = 16/205 (7%)
Query: 5 RVANKDSLLKTTQLLNINPEFNTIWNYRREIIK-LLA-----PSLDQTFWDGELAFTMDK 58
++ +++ +T+LL INPE T WNYR+ ++ LA P+L D EL
Sbjct: 38 KIYTNEAIELSTKLLEINPEAYTAWNYRKLAVEDRLARIEPDPNLVSAILDEELRVVESA 97
Query: 59 LKVRPKVYWIWNHRVWCLEHYPNSPLKIWLKELAIVGKLLEMDARNFHGWHYRRYIVSTV 118
L+ K Y W+HR W L +S EL ++ K ++D+RNFH W+YRR++V
Sbjct: 98 LRQNFKSYGAWHHRKWVLSKGHSSVGN----ELRLLEKFQKLDSRNFHAWNYRRFVVELT 153
Query: 119 ERLSGNCLNSQEFEYTTAKINQNISNFSAWFQRTNIIEHMLARDQIADKESF-IDDEFQY 177
R E +YT IN N SN+SAW R+ ++ +LA++ + I +E+ +
Sbjct: 154 NR-----SEQDELQYTDDMINNNFSNYSAWHNRSVLLSSLLAQNADGFMPNIKIPEEYDF 208
Query: 178 IKNAMFTDAEDQSVWTYLIWFIKES 202
+ +A+FT+ +DQS W Y +W + ++
Sbjct: 209 VHSAIFTEPDDQSGWFYHLWLLDQT 233
>7296795 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 515
Score = 102 bits (254), Expect = 6e-22
Identities = 66/235 (28%), Positives = 96/235 (40%), Gaps = 48/235 (20%)
Query: 8 NKDSLLKTTQLLNINPEFNTIWNYRREII------------------------------- 36
+ + L T Q+L NP+ + +WN RRE +
Sbjct: 45 DNEMLSLTVQILLRNPDVSMLWNIRRECVLEKLFRLKEEEATCETPSEEKPEKENQTGEN 104
Query: 37 -----KLLAPSLDQTFWDGELAFTMDKLKVRPKVYWIWNHRVWCLEHYPNSPLKIWLKEL 91
K + + EL T L V PK Y W+HR W LE P + W +E+
Sbjct: 105 KPSEKKAAGEDKAHSIFTCELDLTEQCLMVNPKSYNAWHHRCWTLEQNPRAD---WQQEV 161
Query: 92 AIVGKLLEMDARNFHGWHYRRYIVSTVERLSGNCLNSQEFEYTTAKINQNISNFSAWFQR 151
+ K L+ D RNFH W YRRY+ +QE ++ T KI N SN+S+W R
Sbjct: 162 KLCNKYLKFDERNFHTWDYRRYVTG-----KAMVPATQELDFCTEKIRANFSNYSSWHHR 216
Query: 152 TNIIEHMLARDQIADK---ESFIDDEFQYIKNAMFTDAEDQSVWTYLIWFIKESA 203
+ ++ + Q D+ E + E + + A FTD D S W Y W + A
Sbjct: 217 SLLLPELYPNQQ-RDRPMSEEKLQKELEMVLTAAFTDPNDSSAWFYQRWLLGSGA 270
>At5g41820 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 687
Score = 92.4 bits (228), Expect = 7e-19
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 25/223 (11%)
Query: 3 NKRVANKDSLLKTTQLLNINPEFNTIWNYRREIIKLLA-----PSLDQTFWDGELAFTMD 57
++++ K+++ + +LL NPEF T WNY + + PSL + D EL +
Sbjct: 34 HQKIYTKEAIQLSAKLLITNPEFYTAWNYPKLAFESRLDEDSDPSLVNSIIDEELGVVQN 93
Query: 58 KLKVRPKVYWIWNHRVWCLE----HYPNSPLKIWLKELAIVGKLLEMD-------ARNFH 106
L+ K Y W HR W L +YP+ ++ L + D +RNFH
Sbjct: 94 ALERNVKSYGAWYHRKWVLSKKGHYYPSLENELQLLNDYQKQAHQKQDDEKQDDPSRNFH 153
Query: 107 GWHYRRYIVSTVERLSGNCLNSQEFEYTTAKINQ-NISNFSAWFQRTNIIEHMLAR--DQ 163
W+YRR++V + E +YTT I+ + + +SAW R+ ++ ++A+ D
Sbjct: 154 AWNYRRFVVELTKTSE-----EDELQYTTDMISDISFTIYSAWHYRSVLVSSLVAKKADG 208
Query: 164 IADKESFIDDEFQYIKNAMFTDAEDQSVWTYLIWFIKESALKE 206
KE+ I E Y+ +A+FT E QS W Y +W + ++ E
Sbjct: 209 FMPKET-IRRELDYVHSAIFTLEEKQSGWFYYLWLLDQTVKME 250
>YKL019w [O] KOG0530 Protein farnesyltransferase alpha subunit/protein
geranylgeranyltransferase type I alpha subunit
Length = 316
Score = 80.5 bits (197), Expect = 3e-15
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 23/194 (11%)
Query: 11 SLLKTTQLLNINPEFNTIWNYRREIIKLLAPSLDQT--FWDGELAFTMDKLKVRPKVYWI 68
+L T +++++ P F TIWNYR I++ + + T + + EL + + PK Y I
Sbjct: 51 ALQLTAEIIDVAPAFYTIWNYRFNIVRHMMSESEDTVLYLNKELDWLDEVTLNNPKNYQI 110
Query: 69 WNHRVWCLEHYPNSPLKIWLKELAIVGKLLEMDARNFHGWHYRRYIVSTVERLSGNCLNS 128
W++R L+ +P+ K +EL I+ +++ D++N+H W YR++ CL
Sbjct: 111 WSYRQSLLKLHPSPSFK---RELPILKLMIDDDSKNYHVWSYRKWC----------CLFF 157
Query: 129 QEFE----YTTAKINQNISNFSAWFQRTNIIEHMLARDQIADKESFIDDEFQYIKNAMFT 184
+F+ Y + I +I N SAW R + + A+D I+ E + DE Q+I + +
Sbjct: 158 SDFQHELAYASDLIETDIYNNSAWTHR--MFYWVNAKDVISKVE--LADELQFIMDKIQL 213
Query: 185 DAEDQSVWTYLIWF 198
++ S WTYL F
Sbjct: 214 VPQNISPWTYLRGF 227
Score = 42.0 bits (97), Expect = 0.001
Identities = 40/186 (21%), Positives = 80/186 (42%), Gaps = 23/186 (12%)
Query: 88 LKELAIVGKLLEMDARNFHGWHYRRYIVSTVERLSGNCLNSQEFEYTTAKINQNISNFSA 147
+K L I L + R + Y+R + +S N L+ + + T I+ + ++
Sbjct: 9 VKPLPIETDLQDELCRIMYTEDYKRLMGLARALISLNELSPRALQLTAEIIDVAPAFYTI 68
Query: 148 WFQRTNIIEHMLARDQIADKESFIDDEFQYIKNAMFTDAEDQSVWTYLIWFIKESALKEH 207
W R NI+ HM++ + D +++ E ++ + ++ +W+Y ++S LK H
Sbjct: 69 WNYRFNIVRHMMSESE--DTVLYLNKELDWLDEVTLNNPKNYQIWSY-----RQSLLKLH 121
Query: 208 MTSEKYSSMLKELTEIIELINDDDISFSGKDNIWCLKTLLVIEF--------IQKDILKE 259
S K I++L+ DDD S ++W + + F D+++
Sbjct: 122 P-----SPSFKRELPILKLMIDDD---SKNYHVWSYRKWCCLFFSDFQHELAYASDLIET 173
Query: 260 DIKSKS 265
DI + S
Sbjct: 174 DIYNNS 179
>Hs4503771 [O] KOG0530 Protein farnesyltransferase alpha subunit/protein
geranylgeranyltransferase type I alpha subunit
Length = 379
Score = 78.2 bits (191), Expect = 1e-14
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 34/213 (15%)
Query: 15 TTQLLNINPEFNTIWNYRREIIKLLAPSLDQTFWDGELAFTMDKLKVRPKVYWIWNHRVW 74
T + +N T+W++RR ++K L L + E+ + ++ +PK Y +W+HR
Sbjct: 120 TRDAIELNAANYTVWHFRRVLLKSLQKDLHE-----EMNYITAIIEEQPKNYQVWHHRRV 174
Query: 75 CLEHYPNSPLKIWLK----ELAIVGKLLEMDARNFHGWHYRRYIVSTVERLSGNCLNSQE 130
+E WL+ EL + +L DA+N+H W +R++++ + L E
Sbjct: 175 LVE---------WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFK------LWDNE 219
Query: 131 FEYTTAKINQNISNFSAWFQRTNIIEHMLARDQIADKESFIDDEFQYIKNAMFTDAEDQS 190
+Y + +++ N S W QR +I + + + ++ E QY + ++S
Sbjct: 220 LQYVDQLLKEDVRNNSVWNQRYFVISNTTGYND----RAVLEREVQYTLEMIKLVPHNES 275
Query: 191 VWTYLIWFIKESALKEHMTSEKYSSMLKELTEI 223
W YL +++ L KY ++L +L ++
Sbjct: 276 AWNYLKGILQDRGL------SKYPNLLNQLLDL 302
Score = 55.1 bits (131), Expect = 1e-07
Identities = 57/264 (21%), Positives = 111/264 (41%), Gaps = 50/264 (18%)
Query: 24 EFNTIWNYRREIIKLLAPSLDQTFWDGELAF--TMDKLKVRPKVYWIWNHRVWCLEHYPN 81
+F +++Y R +++ S E AF T D +++ Y +W+ R L+
Sbjct: 95 KFRDVYDYFRAVLQRDERS--------ERAFKLTRDAIELNAANYTVWHFRRVLLK---- 142
Query: 82 SPLKIWLKELAIVGKLLEMDARNFHGWHYRRYIVSTVERLSGNCLNSQEFEYTTAKINQN 141
S K +E+ + ++E +N+ WH+RR +V + SQE E+ +NQ+
Sbjct: 143 SLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRD------PSQELEFIADILNQD 196
Query: 142 ISNFSAWFQRTNIIEHMLARDQIADKESFIDDEFQYIKNAMFTDAEDQSVWTYLIWFIKE 201
N+ AW R +I+ D+E QY+ + D + SVW + I
Sbjct: 197 AKNYHAWQHRQWVIQEF----------KLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246
Query: 202 -SALKEHMTSEKYSSMLKELTEIIELINDDDISFSGKDNIWCLKTLLVIEFIQKDILKED 260
+ + E+ ++ E+I+L+ ++ +++ K IL++
Sbjct: 247 TTGYNDRAVLER---EVQYTLEMIKLVPHNESAWN----------------YLKGILQDR 287
Query: 261 IKSKSREYLDKLIIIDPLRKNRYL 284
SK L++L+ + P + YL
Sbjct: 288 GLSKYPNLLNQLLDLQPSHSSPYL 311
>7295671 [O] KOG0530 Protein farnesyltransferase alpha subunit/protein
geranylgeranyltransferase type I alpha subunit
Length = 331
Score = 78.2 bits (191), Expect = 1e-14
Identities = 51/216 (23%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 15 TTQLLNINPEFNTIWNYRREIIKLLAPSLDQTFWDGELAFTMDKLKVRPKVYWIWNHRVW 74
TT L +NP T+W YRR++++ L L EL + + + K Y +W+HR
Sbjct: 71 TTDALRLNPANYTVWQYRRDVLRELKADL-----YAELDYLTEVIGQNSKNYQVWHHRRV 125
Query: 75 CLEHYPNSPLKIWLKELAIVGKLLEMDARNFHGWHYRRYIVSTVERLSGNCLNSQEFEYT 134
+E + ++ L E A+V + DA+N+H W +R++ + + L E +
Sbjct: 126 IVEMLNDPSNELELTENALVN---DGDAKNYHAWQHRQWAIRSFN------LYDDELSFV 176
Query: 135 TAKINQNISNFSAWFQRTNIIEHMLARDQIADKE-SFIDDEFQYIKNAMFTDAEDQSVWT 193
I+++ N SAW QR +I+H ++ +E S+ + + IKN ++S W
Sbjct: 177 DRLISEDQRNNSAWNQRFFVIKHFGFTPELIQRELSYTMNRIRIIKN-------NESAWN 229
Query: 194 YLIWFIKESALKEHMTSEKYSSMLKELTEIIELIND 229
YL+ +++ + +++L ++++ + +
Sbjct: 230 YLVGVMRQ--------GDSGNALLSSYPDVVDFVEE 257
>SPAPB1A10.04c [O] KOG0530 Protein farnesyltransferase alpha subunit/protein
geranylgeranyltransferase type I alpha subunit
Length = 294
Score = 70.5 bits (171), Expect = 3e-12
Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 18 LLNINPEFNTIWNYRREIIKLLAPSLDQTFWDGELAFTMDKLKVRPKVYWIWNHRVWCLE 77
L+ NP T+W YR +I+ PS + D EL + + + K Y +W+HR L
Sbjct: 68 LIMNNPAHYTVWAYRFQILNH-TPS----YIDNELEWLDEIAEDFQKNYQVWHHRQKIL- 121
Query: 78 HYPNSPLKIWLKELAIVGKLLEMDARNFHGWHYRRYIVSTVERLSGNCLNSQEFEYTTAK 137
S K + +EL K+ E+D++N+H W YR +I+ SQE + T
Sbjct: 122 ----SLTKNYERELEFTKKMFEIDSKNYHVWSYRVWILQNFNDY------SQELKLTNEL 171
Query: 138 INQNISNFSAWFQRTNIIEHMLARDQIADKESFIDDEFQYIKNAMFTDAEDQSVWTYLIW 197
+ ++I N SAW R + + ++ +++E Y+K+ + ++QS W YL
Sbjct: 172 LEKDIYNNSAWNHRFYV---LFETSKVVSWS--LEEELNYLKDKILFAPDNQSAWNYLCG 226
Query: 198 FIKES 202
+ +S
Sbjct: 227 VLDKS 231
>At3g59380 [O] KOG0530 Protein farnesyltransferase alpha subunit/protein
geranylgeranyltransferase type I alpha subunit
Length = 340
Score = 68.6 bits (166), Expect = 1e-11
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 11 SLLKTTQLLNINPEFNTIWNYRREIIKLLAPSLDQTFWDGELAFTMDKLKVRPKVYWIWN 70
+L T + L +N T+W++RR +++ L L + EL F + K Y +W+
Sbjct: 73 ALRLTEETLLLNSGNYTVWHFRRLVLEALNHDLFE-----ELEFIERIAEDNSKNYQLWH 127
Query: 71 HRVWCLEHYPNSPLKIWLKELAIVGKLLEMDARNFHGWHYRRYIVSTVERLSGNCLNSQE 130
HR W E + +EL ++L +DA+++H W +R++ T+ L G E
Sbjct: 128 HRRWVAEKLGPD---VAGRELEFTRRVLSLDAKHYHAWSHRQW---TLRALGG---WEDE 178
Query: 131 FEYTTAKINQNISNFSAWFQRTNIIEHMLARDQIADKESFIDDEFQYIKNAMFTDAEDQS 190
+Y + ++ N SAW QR +I + E+ + E Y A+ T+ ++S
Sbjct: 179 LDYCHELLEADVFNNSAWNQRYYVITQ---SPLLGGLEAMRESEVSYTIKAILTNPANES 235
Query: 191 VWTYL 195
W YL
Sbjct: 236 SWRYL 240
Score = 60.8 bits (146), Expect = 2e-09
Identities = 45/147 (30%), Positives = 64/147 (42%), Gaps = 18/147 (12%)
Query: 28 IWNYRREIIKLLAPSLDQTFWDGELAFTMDKLKVRPKVYWIWNHRVWCLEHYPNSPLKIW 87
+W++RR + + L P + EL FT L + K Y W+HR W L L W
Sbjct: 125 LWHHRRWVAEKLGPDVAGR----ELEFTRRVLSLDAKHYHAWSHRQWTLR-----ALGGW 175
Query: 88 LKELAIVGKLLEMDARNFHGWHYRRYIVSTVERLSG-NCLNSQEFEYTTAKINQNISNFS 146
EL +LLE D N W+ R Y+++ L G + E YT I N +N S
Sbjct: 176 EDELDYCHELLEADVFNNSAWNQRYYVITQSPLLGGLEAMRESEVSYTIKAILTNPANES 235
Query: 147 AWFQRTNIIEHMLARDQIADKESFIDD 173
+W + + DKES+I D
Sbjct: 236 SWRYLKALYKD--------DKESWISD 254
Score = 45.1 bits (105), Expect = 1e-04
Identities = 32/153 (20%), Positives = 64/153 (40%), Gaps = 18/153 (11%)
Query: 52 LAFTMDKLKVRPKVYWIWNHRVWCLEHYPNSPLKIWLKELAIVGKLLEMDARNFHGWHYR 111
L T + L + Y +W+ R LE + +EL + ++ E +++N+ WH+R
Sbjct: 74 LRLTEETLLLNSGNYTVWHFRRLVLEALNHD----LFEELEFIERIAEDNSKNYQLWHHR 129
Query: 112 RYIVSTVERLSGNCLNSQEFEYTTAKINQNISNFSAWFQRTNIIEHMLARDQIADKESFI 171
R++ + G + +E E+T ++ + ++ AW R + +
Sbjct: 130 RWVAEKL----GPDVAGRELEFTRRVLSLDAKHYHAWSHRQWTLRAL----------GGW 175
Query: 172 DDEFQYIKNAMFTDAEDQSVWTYLIWFIKESAL 204
+DE Y + D + S W + I +S L
Sbjct: 176 EDELDYCHELLEADVFNNSAWNQRYYVITQSPL 208
Score = 35.0 bits (79), Expect = 0.13
Identities = 22/112 (19%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 89 KELAIVGKLLEMDARNFHGWHYRRYIVSTVERLSGNCLNSQEFEYTTAKINQNISNFSAW 148
+ L + + L +++ N+ WH+RR + +E L+ + +E E+ N N+ W
Sbjct: 72 RALRLTEETLLLNSGNYTVWHFRRLV---LEALNHDLF--EELEFIERIAEDNSKNYQLW 126
Query: 149 FQRTNIIEHMLARDQIADKESFIDDEFQYIKNAMFTDAEDQSVWTYLIWFIK 200
R + E + +A + E ++ + + DA+ W++ W ++
Sbjct: 127 HHRRWVAEKL--GPDVAGR------ELEFTRRVLSLDAKHYHAWSHRQWTLR 170
>CE18099 [O] KOG0530 Protein farnesyltransferase alpha subunit/protein
geranylgeranyltransferase type I alpha subunit
Length = 328
Score = 62.0 bits (149), Expect = 1e-09
Identities = 62/288 (21%), Positives = 125/288 (42%), Gaps = 33/288 (11%)
Query: 1 MKNKRVANKDSLLKTTQLLNINPEFNTIWNYRREIIKLLAPSLDQTFWD--GELAFTMDK 58
+KN++ +LL+ + +NP T+W YRR + L WD E+ + D
Sbjct: 54 IKNEKSDRVMALLE--DCIRLNPANYTVWQYRRVCLTELG-------WDLKKEMRYLSDI 104
Query: 59 LKVRPKVYWIWNHRVWCLEHYPNSPLKIWLKELAIVGKLLEMDARNFHGWHYRRYIVSTV 118
++ PK Y +W+HR + +E S + EL +++ + +N+H W +R+++V T
Sbjct: 105 IQESPKNYQVWHHRRFIVETIGESAVN---DELHFCSEVIRDENKNYHAWQHRQWVVRTF 161
Query: 119 ERLSGNCLNSQEFEYTTAKINQNISNFSAWFQRTNIIEHMLARDQIADKESFIDDEFQYI 178
+ +E + + + N SA+ R + M D+ D S +D E
Sbjct: 162 K-----VPLEKELTFALHMLLLDNRNNSAYNYRYFL---MTLYDKTED-ASQLDIEINLA 212
Query: 179 KNAMFTDAEDQSVWTYLIWFIKESALKEHMTSEKYSSMLKELTEIIELINDDDISFSGKD 238
K + ++S W YL + + + + S ++ + ++ E ++ S
Sbjct: 213 KKFIENIPNNESAWNYLAGLLITNGVTSN------SDVVSFVEDLYETTPEEKRS----P 262
Query: 239 NIWCLKTLLVIEFIQKDILKEDIKSKSREYLDKLIIIDPLRKNRYLYQ 286
+ +++E I+ E+ ++++ L IDP+R N Y +Q
Sbjct: 263 FLLAFIADMMLENIENQKSAEESAGRAKKLYKDLQSIDPVRVNYYRHQ 310
>7290303 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 398
Score = 59.3 bits (142), Expect = 6e-09
Identities = 40/143 (27%), Positives = 73/143 (50%), Gaps = 12/143 (8%)
Query: 10 DSLLKTTQL-LNINPEFNTIWNYRREIIKLLAPSLDQTFWDGELAFTMDKLKVRPKVYWI 68
DSL K + L INP+ T W+ RR++++ S+++ EL F+ L ++PK
Sbjct: 93 DSLAKYLNVALLINPDVTTFWHIRRQLVQKNRLSINK-----ELQFSALVLSIKPKSNEA 147
Query: 69 WNHRVWCLEHYPNSPLKIWLKELAIVGKLLEMDARNFHGWHYRRYIVSTVERLSGNCLNS 128
+ +R W L + ++ W E+ I + + A N+H W +R++I+ +G CL
Sbjct: 148 FAYRRW-LYSFQSADAIDWPNEIGICERAADRCASNYHAWSHRQWILQ-----NGPCLLQ 201
Query: 129 QEFEYTTAKINQNISNFSAWFQR 151
E T + ++IS++S + R
Sbjct: 202 SELLRTEKFMRKHISDYSCYHYR 224
>ECU02g1060 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 379
Score = 43.9 bits (102), Expect = 3e-04
Identities = 22/67 (32%), Positives = 34/67 (49%)
Query: 51 ELAFTMDKLKVRPKVYWIWNHRVWCLEHYPNSPLKIWLKELAIVGKLLEMDARNFHGWHY 110
+L + L+ PK Y W+HR + +E + K +E + LL+ D RNFH W+Y
Sbjct: 126 QLRICENALRGNPKSYQPWHHRKFMMERFQKQREKHLGREDFLTKLLLDSDPRNFHCWNY 185
Query: 111 RRYIVST 117
R + T
Sbjct: 186 RMLFLRT 192
>At5g22770 [U] KOG1077 Vesicle coat complex AP-2 alpha subunit
Length = 1012
Score = 36.6 bits (83), Expect = 0.043
Identities = 31/131 (23%), Positives = 61/131 (45%), Gaps = 19/131 (14%)
Query: 151 RTNIIEHMLARDQIADKESFIDDEFQYIKNAMFTDAEDQSVWTYLIWFIKESALKEHMTS 210
R ++ + +++ + +++ QY+ A F+ E+ S LK + +
Sbjct: 375 RRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSMREELS-------------LKAAILA 421
Query: 211 EKYSSMLKELTEIIELINDDDISFSGKDNIWCLKTLLVIEFI-QKDILKEDIKSKSREYL 269
EK++ L ++I + D F D+IW V++F+ + L+ SK+REYL
Sbjct: 422 EKFAPDLSWYVDVILQLIDKAGDFVS-DDIW----FRVVQFVTNNEDLQPYAASKAREYL 476
Query: 270 DKLIIIDPLRK 280
DK+ I + + K
Sbjct: 477 DKIAIHETMVK 487
>At5g22780 [U] KOG1077 Vesicle coat complex AP-2 alpha subunit
Length = 1013
Score = 35.8 bits (81), Expect = 0.074
Identities = 30/131 (22%), Positives = 61/131 (45%), Gaps = 19/131 (14%)
Query: 151 RTNIIEHMLARDQIADKESFIDDEFQYIKNAMFTDAEDQSVWTYLIWFIKESALKEHMTS 210
R ++ + +++ + +++ QY+ A F+ E+ S LK + +
Sbjct: 375 RRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSMREELS-------------LKAAILA 421
Query: 211 EKYSSMLKELTEIIELINDDDISFSGKDNIWCLKTLLVIEFI-QKDILKEDIKSKSREYL 269
EK++ L ++I + D F D+IW V++F+ + L+ SK+REY+
Sbjct: 422 EKFAPDLSWYVDVILQLIDKAGDFVS-DDIW----FRVVQFVTNNEDLQPYAASKAREYM 476
Query: 270 DKLIIIDPLRK 280
DK+ I + + K
Sbjct: 477 DKIAIHETMVK 487
>Hs4757914 [D] KOG3573 Caspase apoptotic cysteine protease
Length = 418
Score = 33.9 bits (76), Expect = 0.28
Identities = 30/108 (27%), Positives = 52/108 (47%), Gaps = 19/108 (17%)
Query: 199 IKESALKEHMTSEKYSSMLKELTEIIELI-NDDDISFSGKDNIWCLKTLLVIEFIQKDIL 257
I +S L + + + + T I L+ N D S S K + KT+ ++E++ KD+L
Sbjct: 5 ILQSGLDNFVINHMLKNNVAGQTSIQTLVPNTDQKSTSVKKDNHKKKTVKMLEYLGKDVL 64
Query: 258 --------KEDI----KSKSREYLDK------LIIIDPLRKNRYLYQI 287
K D+ + + ++Y D LI++D LRKNR +Q+
Sbjct: 65 HGVFNYLAKHDVLTLKEEEKKKYYDAKIEDKALILVDSLRKNRVAHQM 112
>At1g07880 [T] KOG0660 Mitogen-activated protein kinase
Length = 363
Score = 33.1 bits (74), Expect = 0.48
Identities = 23/106 (21%), Positives = 51/106 (47%), Gaps = 7/106 (6%)
Query: 178 IKNAMFTDAEDQSVWTYLIWFIKESALKEHMTSEKYSSMLKELTEIIELINDDDISFSGK 237
+ ++ +T A D +W+ F++ + + Y LK +TE++ +D D+ F
Sbjct: 206 LNSSEYTGAID--IWSVGCIFMEILRRETLFPGKDYVQQLKLITELLGSPDDSDLDFLRS 263
Query: 238 DNIWCLKTLLVIEFIQKDILKE---DIKSKSREYLDKLIIIDPLRK 280
DN K + + +QK +E +I + + +K+++ DP ++
Sbjct: 264 DN--ARKYVKQLPHVQKQSFREKFPNISPMALDLAEKMLVFDPSKR 307
>At5g36870 [M] KOG0916 13-beta-glucan synthase/callose synthase catalytic
subunit
Length = 1662
Score = 32.0 bits (71), Expect = 1.1
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 180 NAMFTDAEDQSVWTYLIWFIKESALKEHMTSEKYSSMLKELTEIIELINDDDISFSGKDN 239
N + T D + T + I K+ + +E S+L +L + + + KD
Sbjct: 752 NTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDK 811
Query: 240 IWCLKTLL-VIEFIQKDILKEDIKSK 264
I + LL ++E + KDILKE++ ++
Sbjct: 812 IQIVNVLLKILEMVTKDILKEEVSNQ 837
>7290299 [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 702
Score = 32.0 bits (71), Expect = 1.1
Identities = 28/118 (23%), Positives = 51/118 (42%), Gaps = 12/118 (10%)
Query: 126 LNSQEFEYTTAKINQNISNFSAWFQRTNIIEHMLARDQIADKESFIDDEFQYIKNAMFTD 185
++ ++++Y ++ N +N+ AWF +IE RDQI + + I N
Sbjct: 307 VSKRKYQYEQ-EVAANPTNYDAWFDYLRLIEAEGDRDQIRETYE------RAISNV--PP 357
Query: 186 AEDQSVWTYLIWFIKESALKEHMTSEKYSSMLKELTEIIELINDDDISFSGKDNIWCL 243
A +++ W I+ AL E + +E + +ELI +FS +W L
Sbjct: 358 ANEKNFWRRYIYLWINYALYEELEAEDAERTRQIYKTCLELIPHKQFTFS---KLWLL 412
>SPBC119.11c [A] KOG1817 Ribonuclease
Length = 363
Score = 30.8 bits (68), Expect = 2.4
Identities = 30/153 (19%), Positives = 62/153 (39%), Gaps = 7/153 (4%)
Query: 45 QTFWDGELAFTMDKLKVRPKVYWIWNHRVWCLEHYPNSPLKIWLKELAIVGKLLEMDARN 104
+ F +GE + L+ ++ H E YPN L L I + LE +
Sbjct: 123 EEFEEGEYPPPLPPLRSEKLKEQVFMHISRAYEIYPNQSNPNEL--LDIHNERLEFLGDS 180
Query: 105 FHGWHYRRYIVSTVERLSGNCLNSQEFEYTTAKINQNISNFSAW--FQRTNIIEHMLARD 162
F R I S ++ L+ ++ N++ F+ F +T ++ + +D
Sbjct: 181 FFNLFTTRIIFSKFPQMDEGSLSKLRAKFVG---NESADKFARLYGFDKTLVLSYSAEKD 237
Query: 163 QIADKESFIDDEFQYIKNAMFTDAEDQSVWTYL 195
Q+ + I D F+ A+ D ++++ + ++
Sbjct: 238 QLRKSQKVIADTFEAYLGALILDGQEETAFQWV 270
>At4g35800 [K] KOG0260 RNA polymerase II large subunit
Length = 1840
Score = 30.8 bits (68), Expect = 2.4
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 169 SFIDDEFQYIKNAMFTDAEDQSVWTYLIWFIKESALKEHMTSEKYSSMLKELTEIIELIN 228
+ I+++F+++++ ED S W ++ +E M +K S + ++ E I L
Sbjct: 1182 TIIEEDFEFVRSYYEMPDEDVSPDKISPWLLRIELNREMMVDKKLS--MADIAEKINLEF 1239
Query: 229 DDDISFSGKDNIWCLKTLLVIEFIQKDILKEDIKSKSRE 267
DDD++ D+ K +L I + + K +++ +S E
Sbjct: 1240 DDDLTCIFNDDN-AQKLILRIRIMNDEGPKGELQDESAE 1277
>Hs4503353 [U] KOG1013 Synaptic vesicle protein rabphilin-3A
Length = 400
Score = 30.4 bits (67), Expect = 3.1
Identities = 17/55 (30%), Positives = 29/55 (51%), Gaps = 4/55 (7%)
Query: 3 NKRVANKDSLLKTTQLLNINPEFNTIWNYRREIIKLLAPSLDQTFWDGELAFTMD 57
+K+ +K + K T +NPEFN + Y E+ L +L+ T WD ++ + D
Sbjct: 300 DKKSKHKTCVKKKT----LNPEFNEEFFYEIELSTLATKTLEVTVWDYDIGKSND 350
>7292152 [Z] KOG3595 Dyneins heavy chain
Length = 3868
Score = 30.0 bits (66), Expect = 4.0
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 213 YSSMLKELTEIIELINDDDISFSGKDNIWCLKTLLVIEFIQKDILKEDIKSKSREYLD 270
+ + KEL +I+ L+ IS + I K+L+VI+ KD+ ++ IK+K D
Sbjct: 1158 FQELSKELNDIVTLVRSPKISNLNRITI---KSLIVIDVHAKDVSEDLIKNKVSSEFD 1212
>YGR184c [O] KOG1140 N-end rule pathway recognition component UBR1
Length = 1950
Score = 29.6 bits (65), Expect = 5.3
Identities = 22/71 (30%), Positives = 33/71 (45%), Gaps = 7/71 (9%)
Query: 214 SSMLKELTEIIELINDDDISFSGKDNI-------WCLKTLLVIEFIQKDILKEDIKSKSR 266
S+ L EL ++ I DD +GKD+I LL I + D+ E I K+
Sbjct: 1060 STFLNELLHLVHGIFRDDELINGKDSIPEAYLSKPICNLLLSIANAKSDVFSESIVRKAD 1119
Query: 267 EYLDKLIIIDP 277
L+K+I+ P
Sbjct: 1120 YLLEKMIMKKP 1130
>At2g27280 [S] KOG2117 Uncharacterized conserved protein
Length = 764
Score = 29.6 bits (65), Expect = 5.3
Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 1/106 (0%)
Query: 119 ERLSGNCLNSQEFEYTTAKINQNISNFSAWFQRTNIIEHMLARDQIADKESFIDDEFQYI 178
ER L S + ++ T + + W + E RD + K+ D F
Sbjct: 123 EREKDEHLFSDKEKFVTGAYKRKLEEQKKWLAEERLRELREERDDVTKKKDLSDFYFNIG 182
Query: 179 KNAMFTDAE-DQSVWTYLIWFIKESALKEHMTSEKYSSMLKELTEI 223
KN F E + L K L+E +EK + KE+T +
Sbjct: 183 KNVAFGAREVEAKEAEKLEEQRKAEKLEEQRKAEKLEELRKEVTRV 228
>YPR108w [O] KOG0687 26S proteasome regulatory complex subunit RPN7/PSMD6
Length = 429
Score = 29.3 bits (64), Expect = 6.9
Identities = 30/122 (24%), Positives = 55/122 (44%), Gaps = 13/122 (10%)
Query: 113 YIVSTVERLSGNCLNSQEFEYTTAKINQNISNFSAWFQRTNIIEHMLAR---DQIADKES 169
Y+ TV R+ ++ + F T +K++ QR E +LA+ +++A
Sbjct: 13 YVDPTVNRVPNYEVSEKAFLLTQSKVSIE--------QRKEAAEFVLAKIKEEEMAPYYK 64
Query: 170 FIDDEFQYIKNAMFTDAEDQSVWTYLIWFIKESALKEHMTSEKYSSMLKELTEIIELIND 229
++ +E Y+ N +D E L +IK + +K S +KEL E I+ + +
Sbjct: 65 YLCEE--YLVNNGQSDLEHDEKSDSLNEWIKFDQELYNELCKKNESKIKELNEKIQKLEE 122
Query: 230 DD 231
DD
Sbjct: 123 DD 124
>At4g27220 [T] KOG4658 Apoptotic ATPase
Length = 919
Score = 29.3 bits (64), Expect = 6.9
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 20/129 (15%)
Query: 28 IWNYRREIIKLLAPSLD-QTFWDGELAFTMDKLKVRPKVYWIWNHRVWCLEHYPNSPLKI 86
+W + ++K APS+D + G L + D L+ K +++ C + +K+
Sbjct: 327 VWKHTLNLLKRSAPSIDTEEKIFGTLKLSYDFLQDNMKSCFLF-----CALFPEDYSIKV 381
Query: 87 ------WLKELAIVGKLLEMDARNFHGWHYRRYIVSTVERLSGNCLNSQEFEYTTAKINQ 140
W+ E + G+ D N V+ VERL +CL T K++
Sbjct: 382 SELIMYWVAEGLLDGQHHYEDMMNEG--------VTLVERLKDSCLLEDGDSCDTVKMHD 433
Query: 141 NISNFSAWF 149
+ +F+ WF
Sbjct: 434 VVRDFAIWF 442
>At5g45990 [D] KOG1915 Cell cycle control protein (crooked neck)
Length = 673
Score = 28.9 bits (63), Expect = 9.0
Identities = 27/125 (21%), Positives = 50/125 (39%), Gaps = 12/125 (9%)
Query: 119 ERLSGNCLNSQEFEYTTAKINQNISNFSAWFQRTNIIEHMLARDQIADKESFIDDEFQYI 178
E + + + FEY ++++N N+ +WF + E + +D+I E
Sbjct: 303 EGIEDAIVGKKRFEYED-EVSKNPLNYDSWFDYVRLEESVGNKDRIR--------EIYER 353
Query: 179 KNAMFTDAEDQSVWTYLIWFIKESALKEHMTSEKYSSMLKELTEIIELINDDDISFSGKD 238
A A+++ W I+ AL E + ++ E ++LI SF+
Sbjct: 354 AIANVPPAQEKRFWQRYIYLWINYALYEEIETKDVERTRDVYRECLKLIPHTKFSFA--- 410
Query: 239 NIWCL 243
IW L
Sbjct: 411 KIWLL 415
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.322 0.137 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,562,796
Number of Sequences: 60738
Number of extensions: 755789
Number of successful extensions: 2041
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1917
Number of HSP's gapped (non-prelim): 49
length of query: 290
length of database: 30,389,216
effective HSP length: 105
effective length of query: 185
effective length of database: 24,011,726
effective search space: 4442169310
effective search space used: 4442169310
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)