ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV2416 good JU KOG2153 Intracellular trafficking, secretion, and vesicular transport Protein involved in the nuclear export of pre-ribosomes
r_klactIV2416 good JU KOG2153 Translation, ribosomal structure and biogenesis Protein involved in the nuclear export of pre-ribosomes
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV2416 820211 822196 662
(662 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR002c [JU] KOG2153 Protein involved in the nuclear export of p... 724 0.0
SPBC887.03c [JU] KOG2153 Protein involved in the nuclear export ... 255 2e-67
Hs20806097 [JU] KOG2153 Protein involved in the nuclear export o... 169 1e-41
7298835 [JU] KOG2153 Protein involved in the nuclear export of p... 129 1e-29
CE27836 [JU] KOG2153 Protein involved in the nuclear export of p... 129 1e-29
At1g79150 [JU] KOG2153 Protein involved in the nuclear export of... 84 5e-16
>YLR002c [JU] KOG2153 Protein involved in the nuclear export of
pre-ribosomes
Length = 663
Score = 724 bits (1870), Expect = 0.0
Identities = 382/662 (57%), Positives = 474/662 (70%), Gaps = 9/662 (1%)
Query: 3 RKRSQKEIQERLAKRRKDADALLETGLFQTEDVEVDDRM---PSKSSWDDDEQDYELKPR 59
R RSQ IQER AK+RK D+LLE +FQ ++D+ SSWD++EQDYE+ PR
Sbjct: 4 RNRSQFRIQERTAKKRKHEDSLLEGNVFQNAPEDMDENTIYSAKGSSWDEEEQDYEMVPR 63
Query: 60 TLKGQDDEDAVEGLPIKRNGKVERNIIKSQRNDVRKXXXXXXXXXXXXXXXXXXXGAASS 119
+ D + VEGLPIK NGKVER + K+Q K G
Sbjct: 64 KNRS-DTSNLVEGLPIKVNGKVERKLHKAQE----KPKDDDEEDEDSNDSSEDDEGPNEE 118
Query: 120 GEEEDDNEVPDXXXXXXXXXXXXXXLVERIMEEAEENTAALTRLRKMAGSKNPNTAKFSI 179
E E + PD LV ++MEE EENTAAL RL KM SKNPNT KFS+
Sbjct: 119 QEAEAKEDEPDTEEKILQLKEDIADLVTKVMEEPEENTAALGRLCKMVESKNPNTCKFSM 178
Query: 180 LALVTVFKSIIPGYRIRPXXXXXXXXXXXXXXARLRSFEENLVFNYKAYVDLLARLSRTP 239
LALV VFKSIIPGYRIRP ++LR+FE+ LV+NYK YV L LS+TP
Sbjct: 179 LALVPVFKSIIPGYRIRPLTETEKKEKVSKEVSKLRNFEQALVYNYKNYVGRLQSLSKTP 238
Query: 240 NNDTPINVNLGNIATNAAIELTSSSMHFNFRSELLTILIRRISKPNPSIDPFYHKAIKTI 299
+N PI V+LG +AT AA EL S++ HFNFR+++ T+L+RRI KP S DP + I+T
Sbjct: 239 SNAAPIQVSLGILATQAAKELISTASHFNFRTDIFTLLLRRICKPRISTDPTSIQIIQTF 298
Query: 300 EGILNEDEEGNVSVEVIRLLSKVLKTRNYNVDESVINVLLSLDILHDYDPNTKTEEEFKM 359
E +LNEDEEG++S E++R+ +K+LKTRN+N++ESV+N+LLSLD+LHDYDPNTK +
Sbjct: 299 ETLLNEDEEGSISFEILRIFNKILKTRNFNIEESVLNMLLSLDVLHDYDPNTKLKGNVSA 358
Query: 360 -KLRKKDRVHLSXXXXXXXXXXXXXXXXMRAAEQAVSAEERERNQAEILKLTLALYLNIL 418
KL+KKDRVHLS MR AEQAVSAEERERNQ+EILK+ +YLNIL
Sbjct: 359 PKLKKKDRVHLSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQSEILKIVFTIYLNIL 418
Query: 419 RSDITKLVGSVLEGLAKFGHMANFDLLGDFLVVMKELIANAELDNLSSSEVRKVLLCIVT 478
+++ L+GSVLEGL KFG+MANFDLLGDFL VMKELI++ E DNLSS+EVRK LLCIV+
Sbjct: 419 KNNAKTLIGSVLEGLTKFGNMANFDLLGDFLEVMKELISDTEFDNLSSAEVRKALLCIVS 478
Query: 479 AFSLVSNHTHMKLSMDLSSFVDALFTVLPYLSFDADIEFSHKSLRLADPLNNELVKPSVN 538
AFSL+SN +MK+++DLS FVD L+ +LPY+ DADIE S++SLRLADPLNNE++KPSVN
Sbjct: 479 AFSLISNTQYMKVNVDLSKFVDGLYALLPYICLDADIELSYRSLRLADPLNNEIIKPSVN 538
Query: 539 VSTKAELLLKALDHVFFRSKSGTKQRAAAFTKRIYMALLHTPEKTSIALLKFLDKLTTKY 598
VSTKAELLLKALDHVFFRSKSGTK+RA AFTKR+YM + HTPEKTSIA+LKF+DKL +Y
Sbjct: 539 VSTKAELLLKALDHVFFRSKSGTKERATAFTKRLYMCISHTPEKTSIAILKFIDKLMNRY 598
Query: 599 PEVLGLYSTDDRIGNGEFRIDTDLPSRSNAEAATIWENSLLVKHYSPSVVKGVRSLFHKS 658
PE+ GLYS++DRIGNG F ++ D PSRSN EAAT+W+N+LL KHY P V KG+RSL +S
Sbjct: 599 PEISGLYSSEDRIGNGHFIMEADNPSRSNPEAATLWDNALLEKHYCPVVTKGLRSLSSRS 658
Query: 659 QE 660
+E
Sbjct: 659 KE 660
>SPBC887.03c [JU] KOG2153 Protein involved in the nuclear export of
pre-ribosomes
Length = 747
Score = 255 bits (651), Expect = 2e-67
Identities = 181/661 (27%), Positives = 321/661 (48%), Gaps = 21/661 (3%)
Query: 4 KRSQKEIQERLAKRRKDADALLETGLFQTEDVEVDDRMPSKSSWDDDEQDYELKPRTLKG 63
K+ +K + + +K L+T +++ V D SK S +DEQDYEL+PR
Sbjct: 92 KKVEKGPRPDIYDLKKSQQFELDTSRLSSDEESVLDY--SKDS--EDEQDYELRPRVSSS 147
Query: 64 QDDEDAVEGLPIKRNGKVERNIIKSQRNDVRKXXXXXXXXXXXXXXXXXXXGAASSGEEE 123
++E + LPIK + +N++ N S E++
Sbjct: 148 WNNE-SYNRLPIKTKDGLLQNVVADVNNGEEFLSESESEASLEIDSDIKDEKQKSLEEQK 206
Query: 124 DDNEVPDXXXXXXXXXXXXXXLVERIMEEAEENTAALTRLRKMAGSKNPNTAKFSILALV 183
E+P ++++EE EN + + + S K S+L L+
Sbjct: 207 IAPEIP-VKQQIKNDKEALGIQAQQLLEEPVENLHLIRNIFEKFDSPYITIKKLSLLTLL 265
Query: 184 TVFKSIIPGYRIRPXXXXXXXXXXXXXXARLRSFEENLVFNYKAYVDLLARLSRTPNNDT 243
VF+ IIPGY+IRP A+ +E+ L+ +Y ++ L + ++ ++
Sbjct: 266 AVFRDIIPGYKIRPLSEEEQGTKLSKEVAQRWEYEQTLLKHYAKFLQTLETILKSFSSTL 325
Query: 244 P-INVNLGNIATNAAIELTSSSMHFNFRSELLTILIRRISKPNPSIDPFYHKAIKTIEGI 302
++L +A +L + HFN +L + +R+IS P + I +++ I
Sbjct: 326 DETQLSLYQVAVRCCTKLIEQASHFNLSEKLFALAVRQISHKTKR--PGFDGIINSLKNI 383
Query: 303 LNEDEEGNVSVEVIRLLSKVLKTRNYNVDESVINVLLSLDILHDYDPNTKT--EEEFKMK 360
ED G S++ + +LS++ K RNY+V V ++ LS++IL+D + ++ K
Sbjct: 384 FEEDNLGKTSLKCVTILSRMFKQRNYDVLPDVYDLFLSVNILNDMKIKDEAWQDDTTNFK 443
Query: 361 LRKKDRVHLSXXXXXXXXXXXXXXXXMRAAEQAVSAEERERNQAEILKLTLALYLNILRS 420
RKKD +L+ M+ A+ ++A+++E+ Q+EILK+ Y L+
Sbjct: 444 KRKKDLPYLTKKARKNYKETKKITQEMKEADAVITAQDKEKYQSEILKIIFITYFKTLQL 503
Query: 421 DITKLVGSVLEGLAKFGHMANFDLLGDFLVVMKELIANAEL----DNLSSSEVRKVLLCI 476
KL+G+ LEG+A+ H+ N + LGD L V++EL+ + + D R+ LL +
Sbjct: 504 K-GKLIGNALEGVARLSHLLNIEFLGDLLQVLRELVMDDTVFLPKDKSGVQATREALLTV 562
Query: 477 VTAFSLVSNHT--HMKLSMDLSSFVDALFTVLPYLSFDADIEFSHKSLRLADPLNNELVK 534
TAF + S + L +DL FV L+ ++ S + D + + K RL DP + K
Sbjct: 563 STAFEIASAQGVGKLNLDLDLGLFVQRLYKIIFPFSLNPDADLNLKIKRLKDP--DAPSK 620
Query: 535 PSV-NVSTKAELLLKALDHVFFRSKSGTKQRAAAFTKRIYMALLHTPEKTSIALLKFLDK 593
P V N +T+ E+LLK FF+SK+ + R ++F+KR+ +A + PE ++ A L L K
Sbjct: 621 PFVVNATTEMEMLLKCFQVFFFKSKNISSSRLSSFSKRLAIASMQLPEHSASADLALLKK 680
Query: 594 LTTKYPEVLGLYSTDDRIGNGEFRIDTDLPSRSNAEAATIWENSLLVKHYSPSVVKGVRS 653
L ++Y ++ L +++++IG+G + + P SN+ A ++E LL HYSP+V + +
Sbjct: 681 LLSRYSKLSRLLTSEEQIGDGIYNPFIEDPDLSNSSTAVLYEPFLLKNHYSPAVSQSAKE 740
Query: 654 L 654
L
Sbjct: 741 L 741
>Hs20806097 [JU] KOG2153 Protein involved in the nuclear export of
pre-ribosomes
Length = 800
Score = 169 bits (429), Expect = 1e-41
Identities = 171/669 (25%), Positives = 280/669 (41%), Gaps = 66/669 (9%)
Query: 4 KRSQKEIQERLAKRRKDADALL------ETGLFQTEDVEVDDRMPSKSSWDDDEQD-YEL 56
+R ++E +E L D D L + F T D+ + + +K + D YE
Sbjct: 77 EREEEEEEEALPLDMMDEDDLQLMKDLGQRVSFLTRDLSSSEPVHAKKRKHERIIDKYEK 136
Query: 57 KPRTLKGQDDEDAVEGLPIKRNGKVERNIIKSQRNDVRKXXXXXXXXXXXXXXXXXXXGA 116
PRTL+ +++ + LPIK + + D K
Sbjct: 137 IPRTLQTAPEKELIHLLPIKDKSGIIPQTREKPVTDSNKDEEDQEEERELEEEIIEDPIQ 196
Query: 117 ASSGEEEDDNEVPDXXXXXXXXXXXXXXLVERIMEEAEENTAALTRLRKMAGSKNPNTA- 175
+ EE + + L I+ + E N L LR M ++P+ A
Sbjct: 197 ELTIEEH----LIERKKKLQEKKMHIAALASAILSDPENNIKKLKELRSMLMEQDPDVAV 252
Query: 176 ---KFSILALVTVFKSIIPGYRIRPXXXXXXXXXXXXXXARLRSFEENLVFNYKAYVDLL 232
K I++L+ +FK I P Y+IRP +LR FEE LV YK Y++ L
Sbjct: 253 TVRKLVIVSLMELFKDITPSYKIRPLTEAEKSTKTRKETQKLREFEEGLVSQYKFYLENL 312
Query: 233 ARL-----SRTPNNDTPINV----NLGNIATNAAIELTSSSMHFNFRSELLTILIRRISK 283
++ R +++ L +A + EL + HFNF + ++ +++ ++
Sbjct: 313 EQMVKDWKQRKLKKSNVVSLKAYKGLAEVAVKSLCELLVALPHFNFHNNIIVLIVPLMND 372
Query: 284 PNPSIDPFYHKAIKTIEGILNEDEEGNVSVEVIRLLSKVLKTRNYNVDESVINVLLSLDI 343
+ I +A+K + +D+ G S+ VI+++S +K RNY V ++ L L I
Sbjct: 373 MSKLISEMCCEAVKK---LFKQDKLGQASLGVIKVISGFVKGRNYEVRPEMLKTFLCLRI 429
Query: 344 LHDYDPNTKTEEEFKMK---LRKKDRVHLSXXXXXXXXXXXXXXXXMRAAEQAVSAEERE 400
+ + TE+ K K K+ R LS +R AE + S E++
Sbjct: 430 -KEVEVKKDTEDINKPKKFMTFKEKRKSLSRMQRKWKKAEEKLERELREAEASESTEKKL 488
Query: 401 RNQAEILKLTLALYLNIL-RSDITKLVGSVLEGLAKFGHMANFDLLGDFLVVMKELIANA 459
+ E L + Y IL ++ + L+ +VLEGLAKF H+ N + D LVV+ LI +
Sbjct: 489 KLHTETLNIVFVTYFRILKKAQRSPLLPAVLEGLAKFAHLINVEFFDDLLVVLHTLIESG 548
Query: 460 ELDNLSSSEVRKVLLCIVTAFSLVSNHTHMKLSMDLSSFVDALFTVLPYLSFDADIEFSH 519
+L S L C+ TAF ++S + L++D F L+ L
Sbjct: 549 DLSYQES------LHCVQTAFHILSGQGDV-LNIDPLKFYTHLYKTL------------- 588
Query: 520 KSLRLADPLNNELVKPSVNVSTKAELLLKALDHVFF-RSKSGTKQRAAAFTKRIYMALLH 578
+L NE V E++L+ LD + R K ++QRA AF KR+ LH
Sbjct: 589 --FKLHAGATNEGV----------EIVLQCLDVMLTKRRKQVSQQRALAFIKRLCTLALH 636
Query: 579 TPEKTSIALLKFLDKLTTKYPEVLGLYSTDDRIGNGEFRIDTDLPSRSNAEAATIWENSL 638
+SI +L L +P+ L ++ + G+G F + D P NA+ +WE
Sbjct: 637 VLPNSSIGILATTRILMHTFPKTDLLLDSESQ-GSGVFLPELDEPEYCNAQNTALWELHA 695
Query: 639 LVKHYSPSV 647
L +HY P V
Sbjct: 696 LRRHYHPIV 704
>7298835 [JU] KOG2153 Protein involved in the nuclear export of
pre-ribosomes
Length = 822
Score = 129 bits (325), Expect = 1e-29
Identities = 117/517 (22%), Positives = 222/517 (42%), Gaps = 56/517 (10%)
Query: 149 IMEEAEENTAALTRLRKMAGSKNPNTA--------KFSILALVTVFKSIIPGYRIRPXXX 200
++E+ E+ L ++ NP + K +I+++ +FK I+P YR+
Sbjct: 245 LLEKPEDKMRNFHALYELMDEINPASRQANLMAVRKLAIISVTEIFKDILPEYRVGQVDT 304
Query: 201 XXXXXXXXXXXARLRSFEENLVFNYKAYVDLL----ARLSRTPNNDTPINVNLGNIATNA 256
+FE L+ +K ++ L A+++R TP V L +A
Sbjct: 305 KMQTLRKATLDRV--TFENALLQQFKKFLQKLEQITAQVNRRGGLRTPQTVKLATVAVQC 362
Query: 257 AIELTSSSMHFNFRSELLTILIRRISKPNPSIDPFYHKAIKTIEGILNEDEEGNVSVEVI 316
+L + +FN+ + +L+ ++ + H+ +T+ + D+ +++ ++
Sbjct: 363 MCDLLVAHPYFNYVQNIAQLLVYMLNCNYAEMRTAVHQCFRTV---FSNDKRLEMTLFIV 419
Query: 317 RLLSKVLKTRNYNVDESVINVLLSLDILHDYDPNTKTEEEFKMKLRKKDRVHLSXXXXXX 376
R ++ ++KT+ NV I L+ L I + + + + E E K K + R L
Sbjct: 420 RRINHLIKTKQNNVHVECITCLMGLKI-KNVNLDAEKENELKQKKLESHRQRLLSLSKKE 478
Query: 377 XXXXXXXXXXMRAAEQAVSAEERERNQ---AEILKLTLALYLNILRSDIT-KLVGSVLEG 432
R E+ + E ++ EI+K+ +Y +L++D T +++ ++LEG
Sbjct: 479 RKRRKKLTEVNRELEETRAEENKQAKHQKLTEIIKMVFTIYFRVLKNDPTSRVLSAILEG 538
Query: 433 LAKFGHMANFDLLGDFLVVMKELIANAELDNLSSSEVRKVLLCIVTAFSLVSNHTHMKLS 492
LA+F H+ N D D + V+ N L++ R+ L C+ T F ++S + L+
Sbjct: 539 LAEFAHVINLDFFSDLIDVL-----NRILEDQDELGYRERLHCVQTIFVILSGQGEV-LN 592
Query: 493 MDLSSFVDALFTVLPYLSFDADIEFSHKSLRLADPLNNELVKPSVNVSTKAELLLKALDH 552
+D F + N L + ++L+ LD
Sbjct: 593 IDPIRFYQHFY-------------------------RNMLAVQAGKNHDDFAIILRTLDE 627
Query: 553 VFF-RSKSGTKQRAAAFTKRIYMALLHTPEKTSIALLKFLDKLTTKYPEVL-GLYSTDDR 610
V R ++ ++QR AF KR+ LH ++A L + K T + VL L TD
Sbjct: 628 VLVKRRRNMSQQRLMAFMKRLLTGSLHLLHNGTLATLGTI-KQTFQLTSVLDNLLDTDTT 686
Query: 611 IGNGEFRIDTDLPSRSNAEAATIWENSLLVKHYSPSV 647
IG+G + + D P NA + ++E +LL +HY P+V
Sbjct: 687 IGSGRYDPELDDPEYCNAASTALYELALLARHYHPTV 723
>CE27836 [JU] KOG2153 Protein involved in the nuclear export of
pre-ribosomes
Length = 812
Score = 129 bits (324), Expect = 1e-29
Identities = 141/665 (21%), Positives = 271/665 (40%), Gaps = 87/665 (13%)
Query: 3 RKRSQKEIQERLAKRRKDADALLETGLFQTEDVEVDDRMPSKSSWDDDEQDYELKPRTLK 62
R+ + E L DAD E F ++ + S DDE D E K R
Sbjct: 104 RQAHYENSDEDLPLDMMDADIDWENSAFANAKRRLEKKRSGVESDSDDEDDVEKKKRKFA 163
Query: 63 GQDDEDAVEGLPIK-RNGKVERNIIKSQRNDVRKXXXXXXXXXXXXXXXXXXXGAASSGE 121
G +E E LPIK ++G + R ++ +V++ SG+
Sbjct: 164 GLLEEGHEELLPIKLKDGTLIR---PTREKEVKEDEEE------------------KSGD 202
Query: 122 EEDDNEVPDXXXXXXXXXXXXXXLVER--IMEEAEENTAA------------LTRLRKMA 167
EE++ E + + +R +M+E ++ A+ + RLR +
Sbjct: 203 EEEEGEEDEPHREDFSHLSASELIAKRRELMQEFKDTIASHANMLLSNPQVNIVRLRDLY 262
Query: 168 GSKN---------PNTAKFSILALVTVFKSIIPGYRIRPXXXXXXXXXXXXXXARLRSFE 218
N + K +I + + V I+PGY IR L ++E
Sbjct: 263 NLCNGEKIHSLVRESVQKLAIASTLQVLLDILPGYAIREQTAEEKAQKQKKETRNLVNYE 322
Query: 219 ENLVFNYKAYVDLLARLSRT------PNNDTPINVNLGNIATNAAIELTSSSMHFNFRSE 272
E+L+ + Y+ L +LS N+++ +G ++ A + S+ HFN+ +
Sbjct: 323 ESLLRYHLKYLQLCEKLSNKLVGKDRHNDESTFTFKMGILSVKALARIVVSAPHFNYSTN 382
Query: 273 LLTILIRRISKPNPSIDPFYHKAIKTIEGILNEDEEGNVSVEVIRLLSKVLKTRNYNVDE 332
+++ L+R N ++ +AI+T+ ED +++ R +S ++ R V
Sbjct: 383 IVSSLVRLSLAKNETVIREVCEAIRTV---FKEDIHLKITLFTARSISTLVTKRKGRVPP 439
Query: 333 SVINVLLSLDILHDYDPNTKTEEEFKMKLR---KKDRVHLSXXXXXXXXXXXXXXXXMRA 389
++ LLS++I D + K+ ++ + + KK++ +
Sbjct: 440 ELLRTLLSMNITEVKDEDKKSGKDALIAKKYQIKKEKASKTAKKYKKQLARLEADLLEVE 499
Query: 390 AEQAVSAEERERNQAEILKLTLALYLNIL-RSDITKLVGSVLEGLAKFGHMANFDLLGDF 448
AE+++S ++ +N E +K Y +IL R + L+ VLEGL+KF H+ + + D
Sbjct: 500 AEESMS--KKLKNATEAMKFAFQSYFSILKRMPNSALLEPVLEGLSKFAHLLSIEFYEDI 557
Query: 449 LVVMKELIANAELDNLSSSEVRKVLLCIVTAFSLVSNHTHMKLSMDLSSFVDALFTVLPY 508
+ M+ ++ N L +L L CI T F ++S + L++D S F + VL +
Sbjct: 558 VSTMENMVQNENLKSLDQ------LHCINTVFVILSGDGQL-LNIDPSKFYRLAYRVLNH 610
Query: 509 LSFDADIEFSHKSLRLADPLNNELVKPSVNVSTKAELLLKALDHVFFRSKSGTKQRAAAF 568
L F+ + + N+++ + + T + R K+ R AAF
Sbjct: 611 LPFE----------KRPEQRKNQIIMAAKTLETM----------LVIRRKAVPLSRVAAF 650
Query: 569 TKRIYMALLHTPEKTSIALLKFLDKLTTKYPEVLGLYSTDDRIGNGEFRIDTDLPSRSNA 628
KR+ + ++ ++ + L +P++ + ++ G +R D D P +NA
Sbjct: 651 VKRLLSIATVLDDFPALCIVSLVRSLFIAHPKLSSMIEDEEGGAPGIYRPDIDDPDVANA 710
Query: 629 EAATI 633
A+ +
Sbjct: 711 LASDV 715
>At1g79150 [JU] KOG2153 Protein involved in the nuclear export of
pre-ribosomes
Length = 495
Score = 84.3 bits (207), Expect = 5e-16
Identities = 70/285 (24%), Positives = 111/285 (38%), Gaps = 23/285 (8%)
Query: 149 IMEEAEENTAALTRLRKMAGSKNPNTAKFSILALVTVFKSIIPGYRIRPXXXXXXXXXXX 208
++ + E N L + + +N K ++L+L+ VFK IIPGYRIR
Sbjct: 201 LLSDPEANIKTLKDMLDICKDQNTKIVKLALLSLLAVFKDIIPGYRIRLPTEKELEMKIS 260
Query: 209 XXXARLRSFEENLVFNYKAYVDLLARLSRTPNNDTPINVNLGNIATNAAIELTSSSMHFN 268
+ R +E L+ YK+Y+ L + IA L + HFN
Sbjct: 261 KEVKKTRFYESTLLKAYKSYLQKLIIFEK--------QSVYNQIANRCLCTLLEAVPHFN 312
Query: 269 FRSELLTILIRRISKPNPSIDPFYHKAIKTIEGILNEDEE-GNVSVEVIRLLSKVLKTRN 327
+R LL ++R IS P+ + I+ + NE + G ++V+ +RL++ +K N
Sbjct: 313 YRDNLLIAVVRNISSPDEVVRRLCCSTIRYL--FSNEGKHGGELTVQAVRLIADHVKAHN 370
Query: 328 YNVDESVINVLLSLDILHDY-DPNTKTEEEFKMKLRKKDRVHLSXXXXXXXXXXXXXXXX 386
+ + I V +S+ D PN + E K K K +
Sbjct: 371 CQLHPNAIEVFMSIRFDEDIGKPNKEDEHNKKYKKNNKRKTQEEQNQVQENERKKSKKDM 430
Query: 387 MRAAEQAVSAE-----------ERERNQAEILKLTLALYLNILRS 420
M VSA+ ER + Q E L Y ILR+
Sbjct: 431 MSKIRDEVSADHRGVTYEPDAKERRKMQTETLSAVFETYFRILRN 475
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.133 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,986,443
Number of Sequences: 60738
Number of extensions: 1277293
Number of successful extensions: 4501
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4469
Number of HSP's gapped (non-prelim): 9
length of query: 662
length of database: 30,389,216
effective HSP length: 113
effective length of query: 549
effective length of database: 23,525,822
effective search space: 12915676278
effective search space used: 12915676278
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)