ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV2661 good J KOG3291 Translation, ribosomal structure and biogenesis Ribosomal protein S7
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV2661 910245 909565 -227
(227 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJR123w [J] KOG3291 Ribosomal protein S7 332 3e-91
At2g37270 [J] KOG3291 Ribosomal protein S7 266 2e-71
At3g11940 [J] KOG3291 Ribosomal protein S7 265 3e-71
SPAC328.10c [J] KOG3291 Ribosomal protein S7 255 3e-68
Hs13904870 [J] KOG3291 Ribosomal protein S7 254 7e-68
SPAC8C9.08 [J] KOG3291 Ribosomal protein S7 253 2e-67
7293320 [J] KOG3291 Ribosomal protein S7 250 1e-66
7299942 [J] KOG3291 Ribosomal protein S7 249 2e-66
CE06360 [J] KOG3291 Ribosomal protein S7 240 1e-63
Hs22047601 [J] KOG3291 Ribosomal protein S7 200 2e-51
ECU04g0140 [J] KOG3291 Ribosomal protein S7 160 1e-39
Hs17486793 [J] KOG3291 Ribosomal protein S7 134 1e-31
Hs17450540 [J] KOG3291 Ribosomal protein S7 130 2e-30
Hs22058976 [J] KOG3291 Ribosomal protein S7 69 7e-12
AtCh082 [J] KOG3291 Ribosomal protein S7 49 6e-06
AtCh068 [J] KOG3291 Ribosomal protein S7 49 6e-06
>YJR123w [J] KOG3291 Ribosomal protein S7
Length = 225
Score = 332 bits (851), Expect = 3e-91
Identities = 169/201 (84%), Positives = 181/201 (89%)
Query: 27 LATTIPVEIQQAQQEIKLFNKWSFEDVEVKDASLVDYIQISKPIYVAHTAGRYANKRFRK 86
LAT IP E+QQAQ EIKLFNKWSFE+VEVKDASLVDY+Q+ +PI+VAHTAGRYANKRFRK
Sbjct: 25 LATPIPEEVQQAQTEIKLFNKWSFEEVEVKDASLVDYVQVRQPIFVAHTAGRYANKRFRK 84
Query: 87 AQCPIVERLTNSLMMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGPRE 146
AQCPI+ERLTNSLMMNGRNNGKKLKAVRI+KHTL+IINVLTDQNP+QVVVDAI N+GPRE
Sbjct: 85 AQCPIIERLTNSLMMNGRNNGKKLKAVRIIKHTLDIINVLTDQNPIQVVVDAITNTGPRE 144
Query: 147 DTTXXXXXXXXXXXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINAAKG 206
DTT SPLRRVNQ+IALLTIGAREAAFRNIKTIAETLAEELINAAKG
Sbjct: 145 DTTRVGGGGAARRQAVDVSPLRRVNQAIALLTIGAREAAFRNIKTIAETLAEELINAAKG 204
Query: 207 SSTSYAIKKKDELERVAKSNR 227
SSTSYAIKKKDELERVAKSNR
Sbjct: 205 SSTSYAIKKKDELERVAKSNR 225
>At2g37270 [J] KOG3291 Ribosomal protein S7
Length = 207
Score = 266 bits (680), Expect = 2e-71
Identities = 137/195 (70%), Positives = 156/195 (79%), Gaps = 3/195 (1%)
Query: 36 QQAQQEIKLFNKWSFEDVEVKDASLVDYIQISKP---IYVAHTAGRYANKRFRKAQCPIV 92
QQ E+KLFN+WSF+DV V D SLVDYI + +V HTAGRY+ KRFRKAQCPIV
Sbjct: 13 QQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRKAQCPIV 72
Query: 93 ERLTNSLMMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGPREDTTXXX 152
ERLTNSLMM+GRNNGKKL AVRIVKH +EII++L+D NP+QV++DAI+NSGPRED T
Sbjct: 73 ERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIG 132
Query: 153 XXXXXXXXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYA 212
SPLRRVNQ+I LLT GAREAAFRNIKTIAE LA+ELINAAKGSS SYA
Sbjct: 133 SAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYA 192
Query: 213 IKKKDELERVAKSNR 227
IKKKDE+ERVAK+NR
Sbjct: 193 IKKKDEIERVAKANR 207
>At3g11940 [J] KOG3291 Ribosomal protein S7
Length = 207
Score = 265 bits (678), Expect = 3e-71
Identities = 138/204 (67%), Positives = 161/204 (78%), Gaps = 4/204 (1%)
Query: 28 ATTIPVEIQQA-QQEIKLFNKWSFEDVEVKDASLVDYIQISKP---IYVAHTAGRYANKR 83
A + EIQQA E+KLFN+W+++DV V D SLVDYI + +V HTAGRY+ KR
Sbjct: 4 AADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYSVKR 63
Query: 84 FRKAQCPIVERLTNSLMMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSG 143
FRKAQCPIVERLTNSLMM+GRNNGKKL AVRIVKH +EII++L+D NP+QV++DAI+NSG
Sbjct: 64 FRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSG 123
Query: 144 PREDTTXXXXXXXXXXXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINA 203
PRED T SPLRRVNQ+I L+T GAREAAFRNIKTIAE LA+ELINA
Sbjct: 124 PREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADELINA 183
Query: 204 AKGSSTSYAIKKKDELERVAKSNR 227
AKGSS SYAIKKKDE+ERVAK+NR
Sbjct: 184 AKGSSNSYAIKKKDEIERVAKANR 207
>SPAC328.10c [J] KOG3291 Ribosomal protein S7
Length = 203
Score = 255 bits (652), Expect = 3e-68
Identities = 137/201 (68%), Positives = 155/201 (76%), Gaps = 1/201 (0%)
Query: 28 ATTIPVEIQQAQQ-EIKLFNKWSFEDVEVKDASLVDYIQISKPIYVAHTAGRYANKRFRK 86
A+ IP E+ + IKLFNK+ FE VEVKD SLVDYI I + HTAGR+ KRFRK
Sbjct: 3 ASIIPKEVSLDETGHIKLFNKFPFEGVEVKDISLVDYITIGNGQPLPHTAGRFQTKRFRK 62
Query: 87 AQCPIVERLTNSLMMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGPRE 146
A+C IVERLTNSLMMNGRNNGKKL A RIVKH EII +LTDQNPLQV+VDA+ GPRE
Sbjct: 63 ARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPRE 122
Query: 147 DTTXXXXXXXXXXXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINAAKG 206
D+T SPLRRVNQ++AL+TIGAREAAFRN+K+I+E LAEE+INAAKG
Sbjct: 123 DSTRIGSAGTVRRQAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKG 182
Query: 207 SSTSYAIKKKDELERVAKSNR 227
SS SYAIKKKDELERVAKSNR
Sbjct: 183 SSNSYAIKKKDELERVAKSNR 203
>Hs13904870 [J] KOG3291 Ribosomal protein S7
Length = 204
Score = 254 bits (649), Expect = 7e-68
Identities = 133/189 (70%), Positives = 151/189 (79%), Gaps = 2/189 (1%)
Query: 41 EIKLFNKWSFEDVEVKDASLVDYIQISKPI--YVAHTAGRYANKRFRKAQCPIVERLTNS 98
+IKLF KWS +DV++ D SL DYI + + Y+ H+AGRYA KRFRKAQCPIVERLTNS
Sbjct: 16 DIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNS 75
Query: 99 LMMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGPREDTTXXXXXXXXX 158
+MM+GRNNGKKL VRIVKH EII++LT +NPLQV+V+AIINSGPRED+T
Sbjct: 76 MMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVR 135
Query: 159 XXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDE 218
SPLRRVNQ+I LL GAREAAFRNIKTIAE LA+ELINAAKGSS SYAIKKKDE
Sbjct: 136 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 195
Query: 219 LERVAKSNR 227
LERVAKSNR
Sbjct: 196 LERVAKSNR 204
>SPAC8C9.08 [J] KOG3291 Ribosomal protein S7
Length = 203
Score = 253 bits (646), Expect = 2e-67
Identities = 133/186 (71%), Positives = 148/186 (79%)
Query: 42 IKLFNKWSFEDVEVKDASLVDYIQISKPIYVAHTAGRYANKRFRKAQCPIVERLTNSLMM 101
IKLFNK+ FE VEVKD SLVDYI I + HTAGR+ KRFRKA+C IVERLTNSLMM
Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITIGNGQPLPHTAGRFQTKRFRKARCFIVERLTNSLMM 77
Query: 102 NGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGPREDTTXXXXXXXXXXXX 161
NGRNNGKKL A RIVKH EII +LTDQNPLQV+VDA+ GPRED+T
Sbjct: 78 NGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQA 137
Query: 162 XXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDELER 221
SPLRRVNQ++AL+TIGAREAAFRN+K+I+E LAEE+INAAKGSS SYAIKKKDELER
Sbjct: 138 VDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIKKKDELER 197
Query: 222 VAKSNR 227
VAKSNR
Sbjct: 198 VAKSNR 203
>7293320 [J] KOG3291 Ribosomal protein S7
Length = 228
Score = 250 bits (639), Expect = 1e-66
Identities = 133/189 (70%), Positives = 148/189 (77%), Gaps = 2/189 (1%)
Query: 41 EIKLFNKWSFEDVEVKDASLVDYIQISKPI--YVAHTAGRYANKRFRKAQCPIVERLTNS 98
EIKLF +WS +DV V D SL DYI + + Y+ H+AGRYA KRFRKAQCPIVERLT S
Sbjct: 40 EIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTCS 99
Query: 99 LMMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGPREDTTXXXXXXXXX 158
LMM GRNNGKKL A RIVKH+ EII++LT +NPLQ++V AIINSGPRED+T
Sbjct: 100 LMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTVR 159
Query: 159 XXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDE 218
SPLRRVNQ+I LL GAREAAFRNIKTIAE LA+ELINAAKGSS SYAIKKKDE
Sbjct: 160 RQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 219
Query: 219 LERVAKSNR 227
LERVAKSNR
Sbjct: 220 LERVAKSNR 228
>7299942 [J] KOG3291 Ribosomal protein S7
Length = 230
Score = 249 bits (636), Expect = 2e-66
Identities = 129/203 (63%), Positives = 153/203 (74%), Gaps = 2/203 (0%)
Query: 27 LATTIPVEIQQAQQEIKLFNKWSFEDVEVKDASLVDYIQISKPI--YVAHTAGRYANKRF 84
+ TT+P + EIKLF +W+ +D+ + D SL DYI + + Y+ H+AGRYA KRF
Sbjct: 28 VVTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFARYLPHSAGRYAAKRF 87
Query: 85 RKAQCPIVERLTNSLMMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGP 144
RKAQCPIVERLT+ LMM GR+NGKKL A RIVKH EII++LT +NPLQV V+AI+NSGP
Sbjct: 88 RKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGP 147
Query: 145 REDTTXXXXXXXXXXXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINAA 204
RED+T SPLRRVNQ+I L+ GAREAAFRNIKT+AE LA+ELINAA
Sbjct: 148 REDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAA 207
Query: 205 KGSSTSYAIKKKDELERVAKSNR 227
KGSS SYAIKKKDELERVAKSNR
Sbjct: 208 KGSSNSYAIKKKDELERVAKSNR 230
>CE06360 [J] KOG3291 Ribosomal protein S7
Length = 210
Score = 240 bits (612), Expect = 1e-63
Identities = 125/189 (66%), Positives = 145/189 (76%), Gaps = 2/189 (1%)
Query: 41 EIKLFNKWSFEDVEVKDASLVDYIQISKPI--YVAHTAGRYANKRFRKAQCPIVERLTNS 98
E+ LF KWS + V V D SLVDYI + + Y+ H+AGR+ +RFRKA CPIVERL NS
Sbjct: 22 EVALFGKWSLQSVNVSDISLVDYIPVKEKSAKYLPHSAGRFQVRRFRKAACPIVERLANS 81
Query: 99 LMMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGPREDTTXXXXXXXXX 158
LMM+GRNNGKKL VRIVKH EII +LT +NP+QV+V+A+INSGPRED+T
Sbjct: 82 LMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGRAGTVR 141
Query: 159 XXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDE 218
+PLRRVNQ+I LL GAREAAFRN+KTIAE LA+ELINAAKGSS SYAIKKKDE
Sbjct: 142 RQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDE 201
Query: 219 LERVAKSNR 227
LERVAKSNR
Sbjct: 202 LERVAKSNR 210
>Hs22047601 [J] KOG3291 Ribosomal protein S7
Length = 337
Score = 200 bits (508), Expect = 2e-51
Identities = 114/188 (60%), Positives = 129/188 (67%), Gaps = 11/188 (5%)
Query: 42 IKLFNKWSFEDVEVKDASLVDYIQISKPI--YVAHTAGRYANKRFRKAQCPIVERLTNSL 99
IKLF KWS +D DY + + Y+ H+A RYA KRFRKAQCPIVE LT S+
Sbjct: 159 IKLFGKWSSDD---------DYTAVKEKYAKYLPHSAERYAAKRFRKAQCPIVECLTYSM 209
Query: 100 MMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGPREDTTXXXXXXXXXX 159
M +GRNN KKL +RIVKH EII +LT NPLQV+V+AIINSGPRED+T
Sbjct: 210 MTHGRNNRKKLMIMRIVKHAFEIIQLLTGDNPLQVLVNAIINSGPREDSTLTGRARIVRR 269
Query: 160 XXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDEL 219
SPL RVNQ+I GA EAAFRNIKTIAE LA+ELI+A KGSS SYA KKKDEL
Sbjct: 270 QAVAVSPLSRVNQAIWPQCTGALEAAFRNIKTIAEFLADELISAVKGSSNSYASKKKDEL 329
Query: 220 ERVAKSNR 227
E VAKSNR
Sbjct: 330 ECVAKSNR 337
>ECU04g0140 [J] KOG3291 Ribosomal protein S7
Length = 208
Score = 160 bits (405), Expect = 1e-39
Identities = 87/187 (46%), Positives = 118/187 (62%)
Query: 41 EIKLFNKWSFEDVEVKDASLVDYIQISKPIYVAHTAGRYANKRFRKAQCPIVERLTNSLM 100
EI LF K+S+E+V+V + SL YI +S+ V H A KA+ PI ER SLM
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRRGIVPHAATTITKGTTGKARIPIAERFVCSLM 81
Query: 101 MNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGPREDTTXXXXXXXXXXX 160
+GRN+GKK A+ I + II+ +T +NPLQV+VDAI+NSGPREDT
Sbjct: 82 RHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSMRRT 141
Query: 161 XXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDELE 220
SPL+R++ +I+ L+ G R A+FRN T+AE +A ELI A+ S SYA+ KK E+E
Sbjct: 142 SVDVSPLKRISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQNSYAVNKKKEIE 201
Query: 221 RVAKSNR 227
R+A+SNR
Sbjct: 202 RIAQSNR 208
>Hs17486793 [J] KOG3291 Ribosomal protein S7
Length = 156
Score = 134 bits (336), Expect = 1e-31
Identities = 79/165 (47%), Positives = 96/165 (57%), Gaps = 27/165 (16%)
Query: 41 EIKLFNKWSFEDVEVKDASLVDYIQISKPI--YVAHTAGRYANKRFRKAQCPIVERLTNS 98
+IKLF KWS +DV++ D SL DYI +++ Y+ H++G YA KRF KAQCPIVE LTNS
Sbjct: 16 DIKLFGKWSTDDVQINDISLQDYIAVTEKYAKYLPHSSGWYAPKRFHKAQCPIVEPLTNS 75
Query: 99 LMMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGPREDTTXXXXXXXXX 158
+MM+GRNN KK VRIV +GP E +T
Sbjct: 76 MMMHGRNNCKKFMTVRIV-------------------------NGPWEGSTRIGRARTVR 110
Query: 159 XXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINA 203
SPLR VNQ+I LL G EA FRNIKTIAE LA++LINA
Sbjct: 111 RQAVDVSPLRHVNQAIWLLCTGTCEAPFRNIKTIAECLADKLINA 155
>Hs17450540 [J] KOG3291 Ribosomal protein S7
Length = 121
Score = 130 bits (326), Expect = 2e-30
Identities = 75/146 (51%), Positives = 92/146 (62%), Gaps = 28/146 (19%)
Query: 81 NKRFRKAQCPIVERLTNSLMMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAII 140
+K F K QCPI+E LTNS+ M+G NNGKK + IVKH EII++L ++N L+V+V+AII
Sbjct: 3 SKHFHKTQCPILEHLTNSMKMHGHNNGKKPMTMHIVKHAFEIIHLLMNENTLRVLVNAII 62
Query: 141 NSGPREDTTXXXXXXXXXXXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEEL 200
NSGP ED+T G EA+F+NIKTIAE L +EL
Sbjct: 63 NSGPWEDSTCIG---------------------------GTCEASFQNIKTIAECLEDEL 95
Query: 201 INAAKGSSTSYAIKKKDELERVAKSN 226
INA +GSS SY I KKDELE VAKSN
Sbjct: 96 INATRGSSNSYVI-KKDELEHVAKSN 120
>Hs22058976 [J] KOG3291 Ribosomal protein S7
Length = 145
Score = 68.6 bits (166), Expect = 7e-12
Identities = 42/83 (50%), Positives = 51/83 (60%), Gaps = 1/83 (1%)
Query: 144 PREDTTXXXXXXXXXXXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINA 203
P ED+T SPL VNQ+I LL G EAAF+NIKTI E LA++LI+
Sbjct: 63 PWEDSTYIEQAETVRQQDVDMSPLYHVNQAIWLLYTGTSEAAFQNIKTITEYLADKLISI 122
Query: 204 AKGSSTSYAIKKKDELERVAKSN 226
AK SS YAI +K+ LE +AKSN
Sbjct: 123 AKNSSNYYAI-EKNNLELMAKSN 144
>AtCh082 [J] KOG3291 Ribosomal protein S7
Length = 155
Score = 48.9 bits (115), Expect = 6e-06
Identities = 42/134 (31%), Positives = 62/134 (45%), Gaps = 5/134 (3%)
Query: 94 RLTNSLMMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGPREDTTXXXX 153
RL N L+ +GKK A +I+ L+ I T+ NPL V+ AI P
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80
Query: 154 XXXXXXXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAI 213
+ +I L +R+ RN +A L+ EL++AAKGS AI
Sbjct: 81 GGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD--AI 135
Query: 214 KKKDELERVAKSNR 227
+KK+E R+A++NR
Sbjct: 136 RKKEETHRMAEANR 149
>AtCh068 [J] KOG3291 Ribosomal protein S7
Length = 155
Score = 48.9 bits (115), Expect = 6e-06
Identities = 42/134 (31%), Positives = 62/134 (45%), Gaps = 5/134 (3%)
Query: 94 RLTNSLMMNGRNNGKKLKAVRIVKHTLEIINVLTDQNPLQVVVDAIINSGPREDTTXXXX 153
RL N L+ +GKK A +I+ L+ I T+ NPL V+ AI P
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80
Query: 154 XXXXXXXXXXXSPLRRVNQSIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAI 213
+ +I L +R+ RN +A L+ EL++AAKGS AI
Sbjct: 81 GGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD--AI 135
Query: 214 KKKDELERVAKSNR 227
+KK+E R+A++NR
Sbjct: 136 RKKEETHRMAEANR 149
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.130 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,614,729
Number of Sequences: 60738
Number of extensions: 327699
Number of successful extensions: 945
Number of sequences better than 1.0e-05: 16
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 915
Number of HSP's gapped (non-prelim): 18
length of query: 227
length of database: 30,389,216
effective HSP length: 103
effective length of query: 124
effective length of database: 24,133,202
effective search space: 2992517048
effective search space used: 2992517048
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)