ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV2751 good R KOG3183 General function prediction only Predicted Zn-finger protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV2751 936863  937672 270  
         (270 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YNL155w [R] KOG3183 Predicted Zn-finger protein                       188   6e-48
Hs13375985 [R] KOG3183 Predicted Zn-finger protein                     74   2e-13
Hs20270357 [R] KOG3183 Predicted Zn-finger protein                     53   5e-07
At3g57480 [R] KOG3183 Predicted Zn-finger protein                      50   4e-06

>YNL155w [R] KOG3183 Predicted Zn-finger protein
          Length = 274

 Score =  188 bits (478), Expect = 6e-48
 Identities = 114/272 (41%), Positives = 153/272 (55%), Gaps = 22/272 (8%)

Query: 3   KEVGMLDVGTHCSFCRQTDFLPFHCSACNGDFCANHRLKEDHHCESLKIGKNSRSSVTVS 62
           KE GMLDVG HC++CRQ DFLPFHCS CN DFC+NHRLKEDHHC  L   ++     T  
Sbjct: 7   KETGMLDVGKHCAYCRQLDFLPFHCSFCNEDFCSNHRLKEDHHCRWLL--EHEEVHKTEK 64

Query: 63  IPXXXXXXVTPKKDNGGSFFQSLLPARAPDRIKTMMQEDNSKPPVDNLK-SKLFNSKTSS 121
            P            N  ++F+SLLP RA  RI+ + +        +  K S   NSKT  
Sbjct: 65  SPSKSRDG---SSSNDEAYFKSLLPERASVRIQRVSETREPLRGSNTAKVSSTLNSKT-- 119

Query: 122 SRVAIDKLRHFFAKN-GXXXXXXXXXXXXXXANKLIQVTKMKRTAKGDDSIPVANRIYAW 180
               +DK+  FF +N                +NK+IQ+  +K+ AKGD  IP+ NRIY W
Sbjct: 120 ----LDKIFKFFQRNEKRKSNNKSKKNFGSSSNKIIQLANLKKIAKGDPKIPMQNRIYIW 175

Query: 181 CYVVADSSDKKPIANE-----VFINKMWPIGRALDSLASVLNVKNSNIDHSISTD--EKL 233
           CY+V    D+  IA E     ++INKMWP+GRA+D L+  LNVK+S + +S S D  +  
Sbjct: 176 CYLV--DGDETDIAKEDTRMPLYINKMWPVGRAMDYLSIQLNVKSSTLTNSSSNDKFQLC 233

Query: 234 FLYKGDASTQHLLPSSARVNATIQEGDTLYLV 265
            L +G   + + + +S RV   I++ DTLYLV
Sbjct: 234 KLKEGKQVSFYNIGASLRVTNEIKDLDTLYLV 265


>Hs13375985 [R] KOG3183 Predicted Zn-finger protein
          Length = 268

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 58/219 (26%), Positives = 93/219 (41%), Gaps = 20/219 (9%)

Query: 8   LDVGTHCSF--CRQTDFLPFHCSACNGDFCANHRLKEDHHC-ESLKIGKNSRSSVTVSIP 64
           LD+G HC    CRQ DFLPF C  C+G FC  HR +E H C E   I +  ++    S P
Sbjct: 4   LDIGQHCQVEHCRQRDFLPFVCDDCSGIFCLEHRSRESHGCPEVTVINERLKTDQHTSYP 63

Query: 65  XXXXXXVTPKKDNGGSFFQSLLPARAPDRIKTMMQEDNSKPPVDNLKSKLFNSKTSSSRV 124
                             + L+    P   K        +   +  K ++   + ++++ 
Sbjct: 64  CSFKDCAE----------RELVAVICPYCEKNFCLRHRHQSDHECEKLEIPKPRMAATQK 113

Query: 125 AIDKLRHFFAKNGXXXXXXXXXXXXXXANKLIQVTKMKRTAKGDDSIPVANRIYAWCYVV 184
            +  +    +K G                  + + K+K  A GD S+P   RIY   ++ 
Sbjct: 114 LVKDI--IDSKTGETASKRWKGAKNSETAAKVALMKLKMHADGDKSLPQTERIYFQVFLP 171

Query: 185 ADSSDK-KPIANEVFINKMWPIGRALDSLASVLNVKNSN 222
             S +K KP+   +F ++ W IG+A+D  AS+  +KN N
Sbjct: 172 KGSKEKSKPM---LFCHR-WSIGKAIDFAASLARLKNDN 206


>Hs20270357 [R] KOG3183 Predicted Zn-finger protein
          Length = 257

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 22/42 (52%), Positives = 27/42 (63%), Gaps = 2/42 (4%)

Query: 9  DVGTHCS--FCRQTDFLPFHCSACNGDFCANHRLKEDHHCES 48
          D+G HCS   C++ DFLP  C AC+G FCA+H     HHC S
Sbjct: 5  DLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGS 46


>At3g57480 [R] KOG3183 Predicted Zn-finger protein
          Length = 249

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 25/57 (43%), Positives = 31/57 (53%), Gaps = 7/57 (12%)

Query: 9  DVGTHCS--FCRQTDFLPFHCSACNGDFCANHRLKEDHHCESLKIGKNSRSSVTVSI 63
          D+G HCS  +C+Q DFLPF C  C   +C +HR    H C      K +R  VTV I
Sbjct: 8  DLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCP-----KGNRGDVTVVI 59


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.318    0.132    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,541,046
Number of Sequences: 60738
Number of extensions: 540927
Number of successful extensions: 1713
Number of sequences better than 1.0e-05: 4
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1703
Number of HSP's gapped (non-prelim): 8
length of query: 270
length of database: 30,389,216
effective HSP length: 105
effective length of query: 165
effective length of database: 24,011,726
effective search space: 3961934790
effective search space used: 3961934790
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)