ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV2970.2 suspect: LH PQ KOG0039 Inorganic ion transport and metabolism Ferric reductase, NADH/NADPH oxidase and related proteins
r_klactIV2970.2 suspect: LH PQ KOG0039 Secondary metabolites biosynthesis, transport and catabolism Ferric reductase, NADH/NADPH oxidase and related proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV2970.2 1005659 1005300 -120
(120 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores:
Score E
Sequences producing significant alignments: (bits) Value
YOL152w [PQ] KOG0039 Ferric reductase NADH/NADPH oxidase and rel... 30 0.70
YOR269w [S] KOG0295 WD40 repeat-containing protein 28 2.7
>YOL152w [PQ] KOG0039 Ferric reductase NADH/NADPH oxidase and related
proteins
Length = 629
Score = 29.6 bits (65), Expect = 0.70
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 13 FIVTKANPHNLPSLFLGIVASTTVPYN--------PKIFFSFVGSRQDHGIFLII 59
F+ K N PS+FL + + V +N P + FS++G G FL++
Sbjct: 74 FLPEKKNSPTTPSVFLARIMTKLVAFNRYICYRKFPTLIFSYLGIPTSVGTFLVV 128
>YOR269w [S] KOG0295 WD40 repeat-containing protein
Length = 494
Score = 27.7 bits (60), Expect = 2.7
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 15 VTKANPHNLPSLFLGIVAS-TTVPYNPKIFFSFVGSRQDHG---IFLIINFGLP 64
V K P NLPS + + +S T+V +P + FV + DHG F + N+ +P
Sbjct: 139 VLKWIPRNLPSCLINVESSVTSVKLHPNLPIVFVAT--DHGKLYAFDLFNYTIP 190
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.327 0.144 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,508,331
Number of Sequences: 60738
Number of extensions: 163171
Number of successful extensions: 349
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 349
Number of HSP's gapped (non-prelim): 2
length of query: 120
length of database: 30,389,216
effective HSP length: 96
effective length of query: 24
effective length of database: 24,558,368
effective search space: 589400832
effective search space used: 589400832
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)