ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactIV3054   suspect: LH   S     KOG3683  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactIV3054 1034883  1035575 231  
         (231 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPL024w [S] KOG3683 Uncharacterized conserved protein                 146   2e-35

>YPL024w [S] KOG3683 Uncharacterized conserved protein
          Length = 241

 Score =  146 bits (369), Expect = 2e-35
 Identities = 79/216 (36%), Positives = 132/216 (60%), Gaps = 18/216 (8%)

Query: 23  LIVKAFNNETW----PTKDIFQRKLITVNRPLLFQVCMIENISRSKLTQVDELQVVIDPR 78
           ++ +A+ NE W     +  I  +KL+ V+R LLFQV M+ENI++SKLTQ+D+++  +DP+
Sbjct: 30  IVFRAYQNEPWLAGTASNLILDKKLVIVDRELLFQVLMVENITKSKLTQIDDIKTKLDPK 89

Query: 79  RQKVDRLSTSRD-----RQQLISEVNLXXXXXXGTTSYHNNSGVGNGDSNYTNNKDAGNL 133
           +QKVDRL +        + ++I++V++      G  + +N +       N +NN  +   
Sbjct: 90  KQKVDRLRSGAQGNGAKKYEVITQVDM---EDDGNVADNNCA-----KENNSNNNSSAAK 141

Query: 134 NQHVYKLILQDKKGNLFYAINLDPIPALKTCFLGSKLIILPGAKFNRGMFTFNNSTVKLM 193
           N+ V+KL LQ K G++F+AIN  PI +  +C LGSK++ILPG  FNRG+F   +S V  +
Sbjct: 142 NKAVFKLTLQSKSGDVFFAINSTPI-SWSSCMLGSKIVILPGTVFNRGVFILKDSQVIFL 200

Query: 194 YGLIQQWNDGKLQKVTEYLQNELDSQNPTLNANGKR 229
            G+ + WN+ + QK  +YL+++L      +N   K+
Sbjct: 201 GGINRVWNENRDQKFCDYLESKLQRDKQLVNGGSKK 236


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.316    0.134    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,358,876
Number of Sequences: 60738
Number of extensions: 545712
Number of successful extensions: 1576
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1573
Number of HSP's gapped (non-prelim): 1
length of query: 231
length of database: 30,389,216
effective HSP length: 103
effective length of query: 128
effective length of database: 24,133,202
effective search space: 3089049856
effective search space used: 3089049856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)