ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactIV3081 suspect: LH K KOG2744 Transcription DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactIV3081 1044527 1041138 -1130
(1130 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL016w [K] KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and ... 395 e-109
SPBC30B4.04c [K] KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1... 53 3e-06
>YPL016w [K] KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related
proteins containing BRIGHT domain
Length = 1314
Score = 395 bits (1014), Expect = e-109
Identities = 261/689 (37%), Positives = 394/689 (56%), Gaps = 91/689 (13%)
Query: 510 EEQIKKLPKVYKRTMARHYSPTTRAITTQNGYDISKISALGEMIHNFKPIFLFAPEFGVV 569
E ++KKLPKVYKR++ R+Y P + NGYDI+ IS +GE I + KPIFLFAPE G +
Sbjct: 646 EIELKKLPKVYKRSIVRNYKPLINRLKHYNGYDINYISKIGEKIDSNKPIFLFAPELGAI 705
Query: 570 NINAIAMQLQSSNNPEVNTALNSLLVISSDNTLSIPLDKCRELLDNLCILACQLLHKLLK 629
N++A++M LQS N E+NTALN+LLV S+D+ L I L K ELLD+L IL LL L +
Sbjct: 706 NLHALSMSLQSKNLGEINTALNTLLVTSADSNLKISLVKYPELLDSLAILGMNLLSNLSQ 765
Query: 630 K--DYSRISGSYTEYDEQQWINTPPKHSDSSDTHIDKIFKE-----SVKKSGEDQSEYTV 682
Y R + Y Y E N + D +DKIF++ ++ + + + T+
Sbjct: 766 NVVPYHRNTSDY--YYEDAGSNQ--YYVTQHDKMVDKIFEKVNNNATLTPNDSNDEKVTI 821
Query: 683 KVDSLTGIDFSQLPI-TPTEPEIEVD--------ATLPEVSLEKDEDENDIEYLPDLLKD 733
VDSLTG +QLP TPTE E ++D +T P V + D I +LP+
Sbjct: 822 LVDSLTG---NQLPTPTPTEMEPDLDTECFISMQSTSPAVK-QWDLLPEPIRFLPNQFP- 876
Query: 734 ENLDEIKKLHFISYMDSLTKVKTEVGSIFSKCHRSGAEDPHLLIVDQLTTISMILRNLSF 793
K+H Y+ SL K+K E+ F+K + GAEDP +LI DQL+TISMILRN+SF
Sbjct: 877 ------LKIHRTPYLTSLKKIKDEIDDPFTKINTRGAEDPKVLINDQLSTISMILRNISF 930
Query: 794 NEQNSQVMANNYHMEKYIADTLWMVFIHRDEFIFERRVLNFKKDLIFILSNITHMLKIES 853
++ NS++M+ N++++++I+D LW+V IH + F R++LNFKKDL+ +LSNI+H+L+I S
Sbjct: 931 SDNNSRIMSRNFYLKRFISDLLWLVLIHPENFTCNRKILNFKKDLVIVLSNISHLLEIAS 990
Query: 854 TVTCLLIIMLALSFADPKDHIQENS------VLTYAEYTMNVEKCQTYGADVLAKLLSLG 907
++ CLLI++L +SF PK + +S LT+ E+ + K QT+G D+LAKL SL
Sbjct: 991 SIDCLLILILVISFGQPKLNPMASSSSFGSESLTFNEFQLQWGKYQTFGVDILAKLFSLE 1050
Query: 908 YPNRAHFKSVLTGVFTEEN----------DDDDICQQVLDLYNGDEK-----FKLFNDIF 952
PN +FKS+L T N D + +++L+LYN + K L ND+
Sbjct: 1051 KPNLNYFKSILLNKNTGNNLYDRNSNNNHKDKKLLRRLLNLYNDNNKNNNNRHNLLNDVV 1110
Query: 953 SFIISTIPFQQI---NKIPNLIEDSL-PSILQALTAAVCIVKFI---------------- 992
SF+ S IP QQ+ + P+L+ D P I Q+LT+ + IV+ I
Sbjct: 1111 SFLFSAIPLQQVLSQSADPSLLIDQFSPVISQSLTSILVIVQKILPLSNEVFEISENNSD 1170
Query: 993 -----DAQEEHCIFKNHNLPCKWLTAEENIGVSLRRISEALANI---AMQNTNLRE---F 1041
+ ++ N NLP WL++EENIG L ++SE + NI +NT L++
Sbjct: 1171 SNSNNNGNKDSSFNFNKNLPFVWLSSEENIGSGLLKLSEIILNINNSTSKNTLLQQQNYS 1230
Query: 1042 KDVLSIISGTAIQLIRLMLEKSL--ELALISDHPKLARKKIIEELSQTPNLLPSDNSAVT 1099
K +L I+ + +QLI+ ++EKS+ E L +D +I+++++ PNL P+D
Sbjct: 1231 KVLLPSINISCVQLIKCLVEKSICFENCLNND------PEILKKIASIPNLFPTDLEIFQ 1284
Query: 1100 IIMNPTTNIFMSNEMKLFYQVCKNIYAEL 1128
+ NP+ +I + N+ +L Y + +I L
Sbjct: 1285 LFTNPSVDIQIINQYQLLYNLKNDILTNL 1313
Score = 126 bits (317), Expect = 2e-28
Identities = 56/131 (42%), Positives = 90/131 (67%), Gaps = 3/131 (2%)
Query: 269 DPAIQRKVGQELNTKQFELFRKSFLEHCRRKNQPADIAQMINGTQVSFFILYMYVQKLNG 328
+PA+Q K+ ELN KQ+ELF KS +E+C+++N P I +++ F LYM VQK G
Sbjct: 393 NPALQEKISTELNNKQYELFMKSLIENCKKRNMPLQSIPEIGNRKINLFYLYMLVQKFGG 452
Query: 329 GENVTKAQQWHILAKKMNIQGPNAGEELAKTYYRYLLPYEKYLMTPEGIKETQTNRIMLQ 388
+ VT+ QQW ++A+++ I + ++L Y+R LLPYE+++++ EGIKETQ RI LQ
Sbjct: 453 ADQVTRTQQWSMVAQRLQI---SDYQQLESIYFRILLPYERHMISQEGIKETQAKRIFLQ 509
Query: 389 QLLQDIIRNIR 399
Q LQ++++ ++
Sbjct: 510 QFLQELLKKVQ 520
>SPBC30B4.04c [K] KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related
proteins containing BRIGHT domain
Length = 865
Score = 52.8 bits (125), Expect = 3e-06
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 565 EFGVVNINAIAMQLQSSNNPEVNTALNSLLVISSDNTLSIPLDKCRELLDNLCILACQLL 624
+ G VNI A+ M LQS+ E+ A+N LL++++D PL +C++++D L +A Q L
Sbjct: 424 DLGTVNIQALCMSLQSTLEKEITYAMNVLLILTNDQKWMFPLSECQDVVDALIDVATQCL 483
Query: 625 HKLL 628
LL
Sbjct: 484 DNLL 487
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.133 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,718,798
Number of Sequences: 60738
Number of extensions: 2545646
Number of successful extensions: 9035
Number of sequences better than 1.0e-05: 2
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9020
Number of HSP's gapped (non-prelim): 7
length of query: 1130
length of database: 30,389,216
effective HSP length: 117
effective length of query: 1013
effective length of database: 23,282,870
effective search space: 23585547310
effective search space used: 23585547310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)